5 results on '"Tong Sun Kobilka"'
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2. Crystal structure of the adenosine A2A receptor bound to an antagonist reveals a potential allosteric pocket.
- Author
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Bingfa Sun, Bachhawat, Priti, Matthew Ling-Hon Chu, Tong Sun Kobilka, Kobilka, Brian K., Wood, Martyn, Ceska, Tom, Sands, Zara A., Mercier, Joel, and Lebon, Florence
- Subjects
ADENOSINES ,ALLOSTERIC regulation ,DRUG therapy for Parkinson's disease ,PARKINSON'S disease treatment ,PARKINSON'S disease diagnosis ,G protein coupled receptors - Abstract
The adenosine A
2A receptor (A2A R) has long been implicated in cardiovascular disorders. As more selective A2A R ligands are being identified, its roles in other disorders, such as Parkinson's disease, are starting to emerge, and A2A R antagonists are important drug candidates for nondopaminergic anti-Parkinson treatment. Here we report the crystal structure of A2A receptor bound to compound 1 (Cmpd-1), a novel A2A R/N-methyl D-aspartate receptor subtype 2B (NR2B) dual antagonist and potential anti-Parkinson candidate compound, at 3.5 Å resolution. The A2A receptor with a cytochrome b562-RIL (BRIL) fusion (A2A R-BRIL) in the intracellular loop 3 (ICL3) was crystallized in detergent micelles using vapor-phase diffusion. Whereas A2A R-BRIL bound to the antagonist ZM241385 has previously been crystallized in lipidic cubic phase (LCP), structural differences in the Cmpd-1-bound A2A R-BRIL prevented formation of the lattice observed with the ZM241385-bound receptor. The crystals grew with a type II crystal lattice in contrast to the typical type I packing seen from membrane protein structures crystallized in LCP. Cmpd-1 binds in a position that overlaps with the native ligand adenosine, but its methoxyphenyl group extends to an exosite not previously observed in other A2A R structures. Structural analysis revealed that Cmpd-1 binding results in the unique conformations of two tyrosine residues, Tyr91.35 and Tyr2717.36, which are critical for the formation of the exosite. The structure reveals insights into antagonist binding that are not observed in other A2A R structures, highlighting flexibility in the binding pocket that may facilitate the development of A2A R-selective compounds for the treatment of Parkinson's disease. [ABSTRACT FROM AUTHOR]- Published
- 2017
- Full Text
- View/download PDF
3. Ligand-specific regulation of the extracellular surface of a G-protein-coupled receptor.
- Author
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Bokoch, Michael P., Yaozhong Zou, Rasmussen, Søren G. F., Liu, Corey W., Nygaard, Rie, Rosenbaum, Daniel M., Fung, Juan José, Hee-Jung Choi, Foon Sun Thian, Tong Sun Kobilka, Puglisi, Joseph D., Weis, William I., Pardo, Leonardo, Prosser, R. Scott, Mueller, Luciano, and Kobilka, Brian K.
- Subjects
NEURAL transmission ,TARGETED drug delivery ,SPECTRUM analysis ,NUCLEAR magnetic resonance spectroscopy ,LIGANDS (Biochemistry) ,ENDOCRINE glands ,ADRENERGIC receptors ,HORMONES ,NEUROTRANSMITTERS - Abstract
G-protein-coupled receptors (GPCRs) are seven-transmembrane proteins that mediate most cellular responses to hormones and neurotransmitters. They are the largest group of therapeutic targets for a broad spectrum of diseases. Recent crystal structures of GPCRs have revealed structural conservation extending from the orthosteric ligand-binding site in the transmembrane core to the cytoplasmic G-protein-coupling domains. In contrast, the extracellular surface (ECS) of GPCRs is remarkably diverse and is therefore an ideal target for the discovery of subtype-selective drugs. However, little is known about the functional role of the ECS in receptor activation, or about conformational coupling of this surface to the native ligand-binding pocket. Here we use NMR spectroscopy to investigate ligand-specific conformational changes around a central structural feature in the ECS of the β
2 adrenergic receptor: a salt bridge linking extracellular loops 2 and 3. Small-molecule drugs that bind within the transmembrane core and exhibit different efficacies towards G-protein activation (agonist, neutral antagonist and inverse agonist) also stabilize distinct conformations of the ECS. We thereby demonstrate conformational coupling between the ECS and the orthosteric binding site, showing that drugs targeting this diverse surface could function as allosteric modulators with high subtype selectivity. Moreover, these studies provide a new insight into the dynamic behaviour of GPCRs not addressable by static, inactive-state crystal structures. [ABSTRACT FROM AUTHOR]- Published
- 2010
- Full Text
- View/download PDF
4. GPCR Engineering Yields High-Resolution Structural Insights into β2-Adrenergic Receptor Function.
- Author
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Rosenbaum, Daniel M., Cherezov, Vadim, Hanson, Michael A., Rasmussen, Søren G. F., Foon Sun Thian, Tong Sun Kobilka, Hee-Jung Choi, Xiao-Jie Yao, Weis, William I., Stevens, Raymond C., and Kobilka, Brian K.
- Subjects
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ADRENERGIC receptors , *G proteins , *NEUROTRANSMITTERS , *HORMONES , *CRYSTALLIZATION , *LYSOZYMES - Abstract
The β2-adrenergic receptor (β2AR) is a well-studied prototype for heterotrimeric guanine nucleotide—binding protein (G protein)—coupled receptors (GPCRs) that respond to diffusible hormones and neurotransmitters. To overcome the structural flexibility of the β2AR and to facilitate its crystallization, we engineered a β2AR fusion protein in which T4 lysozyme (T4L) replaces most of the third intracellular loop of the GPCR (β2AR-T4L") and showed that this protein retains near-native pharmacologic properties. Analysis of adrenergic receptor ligand-binding mutants within the context of the reported high-resolution structure of β2AR-T4L provides insights into inverse-agonist binding and the structural changes required to accommodate catecholamine agonists. Amino acids known to regulate receptor function are linked through packing interactions and a network of hydrogen bonds, suggesting a conformational pathway from the ligand-binding pocket to regions that interact with G proteins. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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5. Probing the β2 Adrenoceptor Binding Site with Catechol Reveals Differences in Binding and Activation by Agonists and Partial Agonists.
- Author
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Swaminath, Gayathri, Deupi, Xavier, Tae Weon Lee, Wen Zhu, Foon Sun Thian, Tong Sun Kobilka, and Kobilka, Brian
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G proteins , *MEMBRANE proteins , *CELL receptors , *ADRENERGIC receptors , *BIOCHEMISTRY , *CATECHOL , *BIOMOLECULES - Abstract
The β2 adrenergic receptor (β2AR) is a prototypical family A G protein-coupled receptor (GPCR) and an excellent model system for studying the mechanism of GPCR activation. The β2AR agonist binding site is well characterized, and there is a wealth of structurally related ligands with functionally diverse properties. In the present study, we use catechol (1,2-benzenediol, a structural component of catecholamine agonists) as a molecular probe to identify mechanistic differences between β2AR activation by catecholamine agonists, such as isoproterenol, and by the structurally related non-catechol partial agonist salbutamol. Using biophysical and pharmacologic approaches, we show that the aromatic ring of salbutamol binds to a different site on the β2AR than the aromatic ring of catecholamines. This difference is important in receptor activation as it has been hypothesized that the aromatic ring of catecholamines plays a role in triggering receptor activation through inter. actions with a conserved cluster of aromatic residues in the sixth transmembrane segment by a rotamer toggle switch mechanism. Our experiments indicate that the aromatic ring of salbutamol does not activate this mechanism either directly or indirectly. Moreover, the non-catechol ring of partial agonists does not interact optimally with serine residues in the fifth transmembrane helix that have been shown to play an important role in activation by catecholamines. These results demonstrate unexpected differences in binding and activation by structurally similar agonists and partial agonists. Moreover, they provide evidence that activation of a GPCR is a multistep process that can be dissected into its component parts using agonist fragments. [ABSTRACT FROM AUTHOR]
- Published
- 2005
- Full Text
- View/download PDF
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