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Efficient diagnosis of apple diseases and pests is crucial to the healthy development of the apple industry. However, the existing single-source image-based classification methods have limitations due to the constraints of single-source input image information, resulting in low classification accuracy and poor stability. Therefore, a classification method for apple disease and pest areas based on multi-source image fusion is proposed in this paper. Firstly, RGB images and multispectral images are obtained using drones to construct an apple diseases and pests canopy multi-source image dataset. Secondly, a vegetation index selection method based on saliency attention is proposed, which uses a multi-label ReliefF feature selection algorithm to obtain the importance scores of vegetation indices, enabling the automatic selection of vegetation indices. Finally, an apple disease and pest area multi-label classification model named AMMFNet is constructed, which effectively combines the advantages of RGB and multispectral multi-source images, performs data-level fusion of multi-source image data, and combines channel attention mechanisms to exploit the complementary aspects between multi-source data. The experimental results demonstrated that the proposed AMMFNet achieves a significant subset accuracy of 92.92%, a sample accuracy of 85.43%, and an F1 value of 86.21% on the apple disease and pest multi-source image dataset, representing improvements of 8.93% and 10.9% compared to prediction methods using only RGB or multispectral images. The experimental results also proved that the proposed method can provide technical support for the coarse-grained positioning of diseases and pests in apple orchards and has good application potential in the apple planting industry. [ABSTRACT FROM AUTHOR]

Ion transport is crucial for salt tolerance in plants. Under salt stress, the high-affinity K+ transporter (HKT) family is mainly responsible for the long-distance transport of salt ions which help to reduce the deleterious effects of high concentrations of ions accumulated within plants. Kiwifruit is well known for its susceptibility to salt stress. Therefore, a current study was designed to decipher the molecular regulatory role of kiwifruit HKT members in the face of salt stress. The transcriptome data from Actinidia valvata revealed that salt stress significantly induced the expression of AvHKT1. A multiple sequence alignment analysis indicated that the AvHKT1 protein contains three conserved amino acid sites for the HKT family. According to subcellular localization analysis, the protein was primarily present in the cell membrane and nucleus. Additionally, we tested the AvHKT1 overexpression in 'Hongyang' kiwifruit, and the results showed that the transgenic lines exhibited less leaf damage and improved plant growth compared to the control plants. The transgenic lines displayed significantly higher SPAD and Fv/Fm values than the control plants. The MDA contents of transgenic lines were also lower than that of the control plants. Furthermore, the transgenic lines accumulated lower Na+ and K+ contents, proving this protein involvement in the transport of Na+ and K+ and classification as a type II HKT transporter. Further research showed that the peroxidase (POD) activity in the transgenic lines was significantly higher, indicating that the salt-induced overexpression of AvHKT1 also scavenged POD. The promoter of AvHKT1 contained phytohormone and abiotic stress-responsive cis-elements. In a nutshell, AvHKT1 improved kiwifruit tolerance to salinity by facilitating ion transport under salt stress conditions. [ABSTRACT FROM AUTHOR]

Secrecy capacity is usually employed as the performance metric of the physical layer security in fiber-optic wiretap channels. However, secrecy capacity can only qualitatively evaluate the physical layer security, and it cannot quantitatively evaluate the physical layer security of an imperfect security system. Furthermore, secrecy capacity cannot quantitatively evaluate the amount of information leakage to the eavesdropper. Based on the channel model of an optical CDMA network using wiretap code, the information leakage rate is analyzed to evaluate the physical layer security. The numerical results show that the information leakage rate can quantitatively evaluate the physical layer security of an optical CDMA wiretap channel, and it is related to transmission distance, eavesdropping position, confidential information rate and optical code. [ABSTRACT FROM AUTHOR]

Summary: Kiwifruit (Actinidia spp) is a woody, perennial and deciduous vine. In this genus, there are multiple ploidy levels but the main cultivated cultivars are polyploid. Despite the availability of many genomic resources in kiwifruit, SNP genotyping is still a challenge given these different levels of polyploidy. Recent advances in SNP array technologies have offered a high‐throughput genotyping platform for genome‐wide DNA polymorphisms. In this study, we developed a high‐density SNP genotyping array to facilitate genetic studies and breeding applications in kiwifruit. SNP discovery was performed by genome‐wide DNA sequencing of 40 kiwifruit genotypes. The identified SNPs were stringently filtered for sequence quality, predicted conversion performance and distribution over the available Actinidia chinensis genome. A total of 134 729 unique SNPs were put on the array. The array was evaluated by genotyping 400 kiwifruit individuals. We performed a multidimensional scaling analysis to assess the diversity of kiwifruit germplasm, showing that the array was effective to distinguish kiwifruit accessions. Using a tetraploid F1 population, we constructed an integrated linkage map covering 3060.9 cM across 29 linkage groups and performed QTL analysis for the sex locus that has been identified on Linkage Group 3 (LG3) in Actinidia arguta. Finally, our dataset presented evidence of tetrasomic inheritance with partial preferential pairing in A. arguta. In conclusion, we developed and evaluated a 135K SNP genotyping array for kiwifruit. It has the advantage of a comprehensive design that can be an effective tool in genetic studies and breeding applications in this high‐value crop. [ABSTRACT FROM AUTHOR]

Underwater wireless communication technology plays an important role in marine environment monitoring and ecological protection. Underwater optical wireless communications (UWOCs) can currently achieve a transmission distance of hundreds of meters, and the rate can reach hundreds of Mbps or even Gbps, with low power consumption and high-speed features. In addition, UWOC also has the advantages of a small transceiver size and strong anti-electromagnetic interference ability, which is especially suitable for scenarios where underwater volume and power consumption are relatively limited. However, UWOC systems face problems such as unstable transceiver ends, ocean turbulence, and so on, resulting in reduced communication reliability and limited transmission distance. Establishing a stable and reliable communication link is critical to extending the communication distance of the UWOC system. In this paper, a model of ocean turbulence channels is established based on the power spectrum inversion method. The transmission characteristics of orbital angular momentum (OAM) light in an ocean turbulence channel are studied, then the mode selection of OAM light is determined. At the same time, the polarization coding technique is applied to the underwater OAM communication system for the first time. The simulation results show that this scheme can effectively extend the communication distance and reduce the system bit error rate. [ABSTRACT FROM AUTHOR]

In underwater wireless optical communication (UWOC), a vortex beam carrying orbital angular momentum has a spatial spiral phase distribution, which provides spatial freedom for UWOC and, as a new information modulation dimension resource, it can greatly improve channel capacity and spectral efficiency. In a case of the disturbance of a vortex beam by ocean turbulence, where a Laguerre–Gaussian (LG) beam carrying orbital angular momentum (OAM) is damaged by turbulence and distortion, which affects OAM pattern recognition, and the phase feature of the phase map not only has spiral wavefront but also phase singularity feature, the convolutional neural network (CNN) model can effectively extract the information of the distorted OAM phase map to realize the recognition of dual-mode OAM and single-mode OAM. The phase map of the Laguerre–Gaussian beam passing through ocean turbulence was used as a dataset to simulate and analyze the OAM recognition effect during turbulence caused by different temperature ratios and salinity. The results showed that, during strong turbulence C n 2 = 1.0 × 10 − 13 K 2 m − 2 / 3 , when different ω = −1.75, the recognition rate of dual-mode OAM (ℓ = ±1~±5, ±1~±6, ±1~±7, ±1~±8, ±1~±9, ±1~±10) had higher recognition rates of 100%, 100%, 100%, 100%, 98.89%, and 98.67% and single-mode OAM (ℓ = 1~5, 1~6, 1~7, 1~8, 1~9, 1~10) had higher recognition rates of 93.33%, 92.77%, 92.33%, 90%, 87.78%, and 84%, respectively. With the increase in ω , the recognition accuracy of the CNN model will gradually decrease, and in a fixed case, the dual-mode OAM has stronger anti-interference ability than single-mode OAM. These results may provide a reference for optical communication technologies that implement high-capacity OAM. [ABSTRACT FROM AUTHOR]

Fruit plants are severely constrained by salt stress in the soil due to their sessile nature. Ca2+ sensors, which are known as CBL-interacting protein kinases (CIPKs), transmit abiotic stress signals to plants. Therefore, it is imperative to investigate the molecular regulatory role of CIPKs underlying salt stress tolerance in kiwifruit. In the current study, we have identified 42 CIPK genes from Actinidia. valvata (A.valvata). All the AvCIPKs were divided into four different phylogenetic groups. Moreover, these genes showed different conserved motifs. The expression pattern analysis showed that AvCIPK11 was specifically highly expressed under salt stress. The overexpression of AvCIPK11 in 'Hongyang' (a salt sensitive commercial cultivar from Actinidia chinensis) enhanced salt tolerance by maintaining K+/Na+ homeostasis in the leaf and positively improving the activity of POD. In addition, the salt-related genes AcCBL1 and AcNHX1 had higher expression in overexpression lines. Collectively, our study suggested that AvCIPK11 is involved in the positive regulation of salt tolerance in kiwifruit. [ABSTRACT FROM AUTHOR]

Bladder cancer (BC) is a common urological malignancy that still lacks an effective treatment. Doxorubicin (Dox) has been widely used in the treatment of various cancers, including BC. However, chemoresistance often hampers the clinical application of Dox, therefore, it is necessary to develop effective strategies to improve its efficacy. By using high‐throughput screening, we identified OSU‐T315, an integrin‐linked kinase (ILK) inhibitor, that can augment the cytotoxicity of Dox against BC cells. We found that OSU‐T315 and Dox synergistically induce apoptosis of BC cells via mitochondrial pathway in a caspase‐dependent. Mechanically, it was found that OSU‐T315 and Dox synergistically induced activation of Bax which is critical for the induction of apoptosis. Moreover, it was also found that the downregulation of BCL‐2 and MCL‐1 is essential for the activation of BAX induced by OSU‐T315 and Dox. OSU‐T315 was found to downregulate MCL‐1 via the GSK‐3β/FBXW7 axis in BC cells. Our findings suggest that combined treatment with OSU‐T315 and Dox may be a promising strategy to treat BC. [ABSTRACT FROM AUTHOR]

With the advancement of underwater communication technology, the traditional modulation dimension has been introduced, developed and utilized. In addition, orbital angular momentum (OAM) is utilized as the modulation dimension for optical underwater communication to obtain larger spectrum resources. The OAM features are extracted using a histogram of oriented gradient and trained using the support vector machine method with a gradient direction histogram feature. The topological charge value of the OAM was used to identify the classification labels, and the ocean turbulence caused by different temperatures and salinity were analyzed. Experimentation results showed that the recognition accuracy for the OAM under the Laguerre–Gaussian beam rates of 1~5, 1~6, 1~7, 1~8, 1~9, and 1~10 was 98.93%, 98.89%, 97.33%, 96.66%, 95.40%, and 95.33%, respectively. The proposed method achieved a high recognition accuracy and performed efficiently under strong turbulence. Our research explored a new technique that provides a new idea for the demodulation of OAM in optical underwater communication. [ABSTRACT FROM AUTHOR]

Kiwifruit is commonly sensitive to waterlogging stress, and grafting onto a waterlogging-tolerant rootstock is an efficient strategy for enhancing the waterlogging tolerance of kiwifruit plants. KR5 (Actinidia valvata) is more tolerant to waterlogging than 'Hayward' (A. deliciosa) and is a potential resistant rootstock for kiwifruit production. Here, we focused on evaluating the performance of the waterlogging-sensitive kiwifruit scion cultivar 'Zhongmi 2′ when grafted onto KR5 (referred to as ZM2/KR5) and Hayward (referred to as ZM2/HWD) rootstocks, respectively, under waterlogging stress. The results showed 'Zhongmi 2′ performed much better when grafted onto KR5 than when grafted onto 'Hayward', exhibiting higher photosynthetic efficiency and reduced reactive oxygen species (ROS) damage. Furthermore, the roots of ZM2/KR5 plants showed greater root activity and energy supply, lower ROS damage, and more stable osmotic adjustment ability than the roots of ZM2/HWD plants under waterlogging stress. In addition, we detected the expression of six key genes involved in the kiwifruit waterlogging response mechanism, and these genes were remarkably induced in the ZM2/KR5 roots but not in the ZM2/HWD roots under waterlogging stress. Moreover, principal component analysis (PCA) further demonstrated the differences in the physiological responses of the ZM2/KR5 and ZM2/HWD plants under waterlogging stress. These results demonstrated that the KR5 rootstock can improve the waterlogging tolerance of grafted kiwi plants by regulating physiological and biochemical metabolism and molecular responses. [ABSTRACT FROM AUTHOR]

Pseudomonas syringae pv. actinidiae (Psa), a bacterial pathogen, is a severe threat to kiwifruit production. To elucidate the species-specific interaction between Psa and kiwifruit, transcriptomic-profiles analyses were conducted, under Psa-infected treatment and mock-inoculated control, on shoots of resistant Maohua (MH) and susceptible Hongyang (HY) kiwifruit varieties. The plant hormone-signal transduction and plant–pathogen interaction were significantly enriched in HY compared with MH. However, the starch and sucrose metabolism, antigen processing and presentation, phagosome, and galactose metabolism were significantly enriched in MH compared with HY. Interestingly, the MAP2 in the pathogen/microbe-associated molecular patterns (PAMPs)-triggered immunity (PTI) was significantly up-regulated in MH. The genes RAR1, SUGT1, and HSP90A in the effector-triggered immunity (ETI), and the NPR1 and TGA genes involved in the salicylic acid signaling pathway as regulatory roles of ETI, were significantly up-regulated in HY. Other important genes, such as the CCRs involved in phenylpropanoid biosynthesis, were highly expressed in MH, but some genes in the Ca2+ internal flow or involved in the reactive oxygen metabolism were obviously expressed in HY. These results suggested that the PTI and cell walls involved in defense mechanisms were significant in MH against Psa infection, while the ETI was notable in HY against Psa infection. This study will help to understand kiwifruit bacterial canker disease and provide important theoretical support in kiwifruit breeding. [ABSTRACT FROM AUTHOR]

Actinidia valvata possesses waterlogging tolerance; however, the mechanisms underlying this trait are poorly characterized. Here, we performed a transcriptome analysis by combining single-molecule real-time (SMRT) sequencing and Illumina RNA sequencing and investigated the physiological responses of the roots of KR5 (A. valvata, a tolerant genotype) after 0, 12, 24 and 72 h of waterlogging stress. KR5 roots responded to waterlogging stress mainly via carbohydrate and free amino acids metabolism and reactive oxygen species (ROS) scavenging pathways. Trehalose-6-phosphate synthase (TPS) activity, alcohol dehydrogenase (ADH) activity and the total free amino acid content increased significantly under waterlogging stress. The nicotinamide adenine dinucleotide-dependent glutamate synthase/alanine aminotransferase (NADH-GOGAT/AlaAT) cycle was correlated with alanine accumulation. Levels of genes encoding peroxidase (POD) and catalase (CAT) decreased and enzyme activity increased under waterlogging stress. Members of the LATERAL ORGAN BOUNDARIES (LOB), AP2/ERF-ERF, Trihelix and C3H transcription factor families were identified as potential regulators of the transcriptional response. Several hub genes were identified as key factors in the response to waterlogging stress by a weighted gene co-expression network analysis (WGCNA). Our results provide insights into the factors contributing to waterlogging tolerance in kiwifruit, providing a basis for further studies of interspecific differences in an important plant trait and for molecular breeding. [ABSTRACT FROM AUTHOR]

The green filler PDA-SiCB was prepared by grafting polydopamine (PDA) to rice husk-derived silicon carbon black (SiCB). The effect of PDA-SiCB as a renewable filler on the properties of natural rubber/butadiene rubber (NR/BR) composites was studied in detail. The PDA coating formed on the surface of SiCB could not only improve the surface activity of the SiCB and promote the dispersion of the SiCB, but also effectively solved the problem of compatibility between the SiCB and the matrix, greatly improved the interface strength, thus effectively improving the properties of rubber composites. As a result, the tensile strength of NR/BR/PDA-SiCB composites prepared by mechanical blending with dopamine modified filler was greatly improved, reaching 23.1 MPa, which are 63 % and 106 % higher than that of NR/BR/SiCB composite and NR/BR rubber. And compared with NR/BR/SiCB, the elongation at break and glass transition temperature (Tg) of NR/BR/PDA-SiCB were increased by 30 % and 3.87 oC, respectively, and the thermal stability was also improved. [ABSTRACT FROM AUTHOR]

Among the genus Actinidia, Actinidia arguta possesses the strongest cold resistance and produces fresh fruit with an intense flavor. To investigate genomic variation that may contribute to variation in phenotypic traits, we performed whole-genome re-sequencing of four A. arguta genotypes originating from different regions in China and identified the polymorphisms using InDel markers. In total, 4,710,650, 4,787,750, 4,646,026, and 4,590,616 SNPs and 1,481,002, 1,534,198, 1,471,304, and 1,425,393 InDels were detected in the 'Ruby-3', 'Yongfeng male', 'Kuilv male', and 'Hongbei male' genomes, respectively, compared with the reference genome sequence of cv 'Hongyang'. A subset of 120 InDels were selected for re-sequencing validation. Additionally, genes related to non-synonymous SNPs and InDels in coding domain sequences were screened for functional analysis. The analysis of GO and KEGG showed that genes involved in cellular responses to water deprivation, sucrose transport, decreased oxygen levels and plant hormone signal transduction were significantly enriched in A. arguta. The results of this study provide insight into the genomic variation of kiwifruit and can inform future research on molecular breeding to improve cold resistance in kiwifruit. [ABSTRACT FROM AUTHOR]

It is well known that rutile TiO2 has extremely inferior photocatalytic performance due to lower electron mobility and specific surface area than anatase TiO2. In addition, the photocatalytic performance of BiOBr is also not satisfactory due to small specific surface area and positive conduction band position. However, when the two above-mentioned catalysts were combined to form composites via an in situ synthesis approach, resulting that rutile TiO2–BiOBr composites exhibited a superior performance of almost the same photocatalytic effect as anatase TiO2–BiOBr composites, of which the apparent rate constant of MO photodegradation was approximately 1.6 times larger than that of anatase TiO2 and 6.3 times larger than that of BiOBr. To further investigate the reasons, the samples were characterized by XRD, TEM, DRS, EIS, BET, PL, etc. Although RT + BOB has better EIS or PL data than AT + BOB, the specific surface area of AT + BOB is larger than that of RT + BOB. In addition, it can be deduced that photogenerated holes are the dominant active species of TiO2–BiOBr composites by active species trapping experiments. Finally, a possible mechanism for the enhancement of photocatalytic performance of rutile TiO2–BiOBr composites was proposed. [ABSTRACT FROM AUTHOR]

The genome-wide association studies aim at identifying common or rare variants associated with common diseases and explaining more heritability. It is well known that common diseases are influenced by multiple single nucleotide polymorphisms (SNPs) that are usually correlated in location or function. In order to powerfully detect association signals, it is highly desirable to take account of correlations or linkage disequilibrium (LD) information among multiple SNPs in testing for association. In this article, we propose a test SLIDE that depicts the difference of the average multi-locus genotypes between cases and controls and derive its variance-covariance matrix in the retrospective design. This matrix is composed of the pairwise LD between SNPs. Thus SLIDE can borrow the strength from an external database in the population of interest with a few thousands to hundreds of thousands individuals to improve the power for detecting association. Extensive simulations show that SLIDE has apparent superiority over the existing methods, especially in the situation involving both common and rare variants, both protective and deleterious variants. Furthermore, the efficiency of the proposed method is demonstrated in the application to the data from the Wellcome Trust Case Control Consortium. [ABSTRACT FROM AUTHOR]

As important regulators, miRNAs could play pivotal roles in regulation of fruit coloring. Actinidia arguta is a newly emerged fruit tree with extensively application prospects. However, miRNAs involved in A. arguta fruit coloring are unknown. In this study, A. arguta fruit were investigated at three developmental stages by small RNAs high-throughput sequencing. A total of 482 conserved miRNAs corresponding to 526 pre-miRNAs and 581 novel miRNAs corresponding to 619 pre-miRNAs were grouped into 46 miRNA families. Target gene prediction and analysis revealed that miR858, a strongly candidate miRNA, was involved in anthocyanin biosynthesis in which contributes to fruit coloring. The anthocyanin level was determined in three A. arguta cultivars by UPLC-MS/MS (ultra-performance liquid chromatography coupled with tandem mass spectrometry). In addition, qPCR (quantitative real-time PCR), cluster analysis were conducted as well as correlation analysis. All results were combined to propose a model in which describes an association of miRNA and anthocyanin biosynthesis in A. arguta. The data presented herein is the first report on miRNA profile analysis in A. arguta, which can provide valuable information for further research into the regulation of the miRNAs in anthocyanin biosynthesis and fruit coloring. [ABSTRACT FROM AUTHOR]

Kiwifruit bacterial canker is a devastating disease threatening kiwifruit production. To clarify the defense mechanism in response to Pseudomonas syringae pv. actinidiae (Psa), we observed phenotypic changes in resistant Huate (HT) and susceptible Hongyang (HY) kiwifruit varieties at 0, 12, 24, 48, 96, and 144 hour after inoculation (hai) with Psa. Brown lesions appeared in the inoculation areas 12 hai in HY shoots, and the lesion length gradually increased from 24 to 144 h. In contrast, no lesions were found in HT shoots at any time points. Furthermore, RNA-seq analysis showed significantly more differentially expressed genes between HT and HY at 12 hai than at any other time point. According to weighted gene co-expression network analysis, five modules were notably differentially expressed between HT and HY; pathway mapping using the Kyoto Encyclopedia of Gene and Genomes database was performed for the five modules. In MEgreenyellow and MEyellow modules, pathways related to“plant-pathogen interaction”, “Endocytosis”, “Glycine, serine and threonine metabolism”, and “Carbon fixation in photosynthetic organisms” were enriched, whereas in the MEblack module, pathways related to “protein processing in endoplasmic reticulum”, “plant-pathogen interaction”, and “Glycolysis / Gluconeogenesis” were enriched. In particular, the Pti1 and RPS2 encoding effector receptors, and the NPR1, TGA, and PR1 genes involved in the salicylic acid signaling pathway were significantly up-regulated in HT compared with HY. This indicates that the effector-triggered immunity response was stronger and that the salicylic acid signaling pathway played a pivotal role in the Psa defense response of HT. In addition, we identified other important genes, involved in phenylpropanoid biosynthesis and Ca2+ internal flow, which were highly expressed in HT. Taken together, these results provide important information to elucidate the defense mechanisms of kiwifruit during Psa infection. [ABSTRACT FROM AUTHOR]

Actinidia arguta is the most basal species in a phylogenetically and economically important genus in the family Actinidiaceae. To better understand the molecular basis of the Actinidia arguta chloroplast (cp), we sequenced the complete cp genome from A. arguta using Illumina and PacBio RS II sequencing technologies. The cp genome from A. arguta was 157,611 bp in length and composed of a pair of 24,232 bp inverted repeats (IRs) separated by a 20,463 bp small single copy region (SSC) and an 88,684 bp large single copy region (LSC). Overall, the cp genome contained 113 unique genes. The cp genomes from A. arguta and three other Actinidia species from GenBank were subjected to a comparative analysis. Indel mutation events and high frequencies of base substitution were identified, and the accD and ycf2 genes showed a high degree of variation within Actinidia. Forty-seven simple sequence repeats (SSRs) and 155 repetitive structures were identified, further demonstrating the rapid evolution in Actinidia. The cp genome analysis and the identification of variable loci provide vital information for understanding the evolution and function of the chloroplast and for characterizing Actinidia population genetics. [ABSTRACT FROM AUTHOR]

Proanthocyanidins (PAs) are important metabolites that enhance freezing tolerance of plants. Actinidia arguta, especially freezing‐tolerant germplasms, accumulate abundant PAs in dormant shoots and thereby enhance freezing tolerance, but the underlying mechanism is unknown. In this study, we used two A. arguta with contrasting cold‐resistant phenotypes, KL and RB, to explore the mechanisms in response to cold tolerance. We determined that a leucoanthocyanidin reductase gene (AaLAR1) was more highly expressed in freezing‐tolerant KL than in freezing‐sensitive RB. Moreover, overexpressing AaLAR1 in kiwifruit promoted PAs biosynthesis and enhanced cold tolerance. The AaLAR1 promoters of various A. arguta germplasms differ due to the presence of a 60‐bp deletion in cold‐tolerant genotypes that forms a functional binding site for MYC‐type transcription factor. Yeast one‐hybrid and two‐hybrid, dual‐luciferase reporter, bimolecular fluorescence complementation and coimmunoprecipitation assays indicated that the AaMYC2a binds to the MYC‐core cis‐element in the AaLAR1 promoter with the assistance of AaMYB5a, thereby promoting PAs accumulation in the shoots of cold‐tolerant kiwifruit. We conclude that the variation in the AaLAR1 promoter and the AaMYC2a–AaMYB5a–AaLAR1 module shape freezing tolerance in A. arguta. The identification of a key structural variation in the AaLAR1 promoter offers a new target for resistance breeding of kiwifruit. [ABSTRACT FROM AUTHOR]

To assess the interrelation between the change of metabolites and the change of fruit color, we performed a combined metabolome and transcriptome analysis of the flesh in two different Actinidia arguta cultivars: “HB” (“Hongbaoshixing”) and “YF” (“Yongfengyihao”) at two different fruit developmental stages: 70d (days after full bloom) and 100d (days after full bloom). Metabolite and transcript profiling was obtained by ultra-performance liquid chromatography quadrupole time-of-flight tandem mass spectrometer and high-throughput RNA sequencing, respectively. The identification and quantification results of metabolites showed that a total of 28,837 metabolites had been obtained, of which 13,715 were annotated. In comparison of HB100 vs. HB70, 41 metabolites were identified as being flavonoids, 7 of which, with significant difference, were identified as bracteatin, luteolin, dihydromyricetin, cyanidin, pelargonidin, delphinidin and (−)-epigallocatechin. Association analysis between metabolome and transcriptome revealed that there were two metabolic pathways presenting significant differences during fruit development, one of which was flavonoid biosynthesis, in which 14 structural genes were selected to conduct expression analysis, as well as 5 transcription factor genes obtained by transcriptome analysis. RT-qPCR results and cluster analysis revealed that AaF3H, AaLDOX, AaUFGT, AaMYB, AabHLH, and AaHB2 showed the best possibility of being candidate genes. A regulatory network of flavonoid biosynthesis was established to illustrate differentially expressed candidate genes involved in accumulation of metabolites with significant differences, inducing red coloring during fruit development. Such a regulatory network linking genes and flavonoids revealed a system involved in the pigmentation of all-red-fleshed and all-green-fleshed A. arguta, suggesting this conjunct analysis approach is not only useful in understanding the relationship between genotype and phenotype, but is also a powerful tool for providing more valuable information for breeding. [ABSTRACT FROM AUTHOR]

Heavy metal-contaminated farmland, especially for cadmium (Cd), is being used for agricultural production in large scale due to the increasing food demand. Thus, minimizing the influx of Cd to the human food chain is urgently needed. Screening for stably low Cd and moderately high micronutrient wheat cultivars is one of the most feasible and effective approaches to ensure food safety and quality. Here, the Cd accumulation by 72 wheat cultivars was identified in field 1, and the stability of Cd accumulation in these cultivars was tested in fields 2 and 3. The effects of Cd on micronutrient (zinc (Zn), copper (Cu), iron (Fe), manganese (Mn), and boron (B)) uptake in grains were also investigated. Nine of the 24 low-Cd wheat cultivars identified by screening showed stably low-Cd and moderately high micronutrient concentrations in grain. Nine cultivars exhibited unstable low-Cd accumulation characteristics, and another five cultivars contained significantly lower Zn concentrations in grain in at least two experimental fields. One low-Cd cultivar also had low Zn, Cu and Mn concentrations in grain. The accumulation of Cd in wheat grain had little effects on the uptake of Fe. Grain Cd concentration correlated positively with the dry weight of stem and root, and negatively with the spike length. There was no correlation between grain Cd concentration and wheat yield. The selected cultivars with stably low-Cd accumulation and moderately high micronutrient concentrations in grain are recommended for cultivation in slightly to moderately Cd-contaminated farmland to ensure food safety for the growing human population. Image 1 • Nine cultivars were screened for stably low-Cd and high micronutrient in grain. • Nine of 24 low-Cd cultivars exhibited unstable low Cd accumulation characteristics. • Some low-Cd cultivars also contained significantly lower Zn concentration in grain. • Accumulation of Cd in wheat grain had little effects on the uptake of Fe. • Grain [Cd] correlated negatively with spike length, positively with root dry weight. [ABSTRACT FROM AUTHOR]

Study on kiwifruit ( Actinidia chinensis and A. deliciosa ) color mainly concentrated in green and yellow-fleshed cultivars, less about molecular mechanism of red-fleshed trait formation, rarely in all red-fleshed fruit. Using ‘Tianyuanhong’ and ‘Yongfengyihao’ (‘TY’, a kind of all red-fleshed cultivar, from Actinidia arguta ; ‘YF’, a kind of all green-fleshed cultivar, also from Actinidia arguta ) as experimental material, we performed RNA-seq to obtain 202,742 unigenes with an average length of 603 bp and N50 of 873 bp via transcriptome data analysis. Of these unigenes, 72,508 (35.76%) were annotated and 997 were assigned to secondary metabolic pathways, of which 104 unigenes were involved in flavonoid and anthocyanin biosynthesis. According to the parameter log2fold-change and p-adjusted, 12 differentially expressed structural genes were selected for performing expression profiles and cluster analysis. Physiological traits including color ration, hue angle, and anthocyanin content were also investigated. From the results, we concluded Aa LDOX (genes encoding leucoanthocyanidin dioxygenase) maybe the key gene controlling anthocyanin biosynthesis in flesh of ‘TY’ kiwifruit, which promoted accumulation of anthocyanin, finally leading to the red flesh coloration. [ABSTRACT FROM AUTHOR]

The ethylene-responsive VII (ERF-VII) transcription factors are crucial in regulating plant waterlogging tolerance. However, the positive role of ERF-VII genes in kiwifruit waterlogging tolerance is rarely reported. In this study, we cloned the AvERF75 gene from the waterlogging-tolerant genotype KR5 (Actinidia valvata) and explored its roles in response to waterlogging stress. Subcellular localization showed AvERF75 protein was localized in cytoplasm and nucleus, and transactivation assays indicated it exhibited transactivation activity. Overexpression of AvERF75 significantly improved the waterlogging tolerance of transgenic plants (both tobacco and kiwifruit) by scavenging ROS. furthermore, we identified AvLOB41 as an interacting partner of AvERF75 protein by Y2H screening and BiFC assay. Taken together, this study confirms the positive role of AvERF75 in regulating waterlogging tolerance and reveals a new regulatory network in response to waterlogging stress. • This study proposes a putative model of AvERF75 and AvLOB4 in modulating waterlogging tolerance in kiwifruit. • Overexpression of AvERF75 enhanced waterlogging tolerance of transgenic plants. • AvLOB41 is involved in the waterlogging tolerance mediated by AvERF75. [ABSTRACT FROM AUTHOR]