19 results on '"Scholten, Ernst T"'
Search Results
2. Towards safe and reliable deep learning for lung nodule malignancy estimation using out-of-distribution detection
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Peeters, Dré, Venkadesh, Kiran V., Dinnessen, Renate, Saghir, Zaigham, Scholten, Ernst T., Vliegenthart, Rozemarijn, Prokop, Mathias, and Jacobs, Colin
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- 2025
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3. Trends in the incidence of pulmonary nodules in chest computed tomography: 10-year results from two Dutch hospitals
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Hendrix, Ward, Rutten, Matthieu, Hendrix, Nils, van Ginneken, Bram, Schaefer-Prokop, Cornelia, Scholten, Ernst T., Prokop, Mathias, and Jacobs, Colin
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- 2023
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4. Deep learning for the detection of benign and malignant pulmonary nodules in non-screening chest CT scans
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Hendrix, Ward, Hendrix, Nils, Scholten, Ernst T., Mourits, Mariëlle, Trap-de Jong, Joline, Schalekamp, Steven, Korst, Mike, van Leuken, Maarten, van Ginneken, Bram, Prokop, Mathias, Rutten, Matthieu, and Jacobs, Colin
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- 2023
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5. Validation, comparison, and combination of algorithms for automatic detection of pulmonary nodules in computed tomography images: The LUNA16 challenge
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Setio, Arnaud Arindra Adiyoso, Traverso, Alberto, de Bel, Thomas, Berens, Moira S.N., Bogaard, Cas van den, Cerello, Piergiorgio, Chen, Hao, Dou, Qi, Fantacci, Maria Evelina, Geurts, Bram, Gugten, Robbert van der, Heng, Pheng Ann, Jansen, Bart, de Kaste, Michael M.J., Kotov, Valentin, Lin, Jack Yu-Hung, Manders, Jeroen T.M.C., Sóñora-Mengana, Alexander, García-Naranjo, Juan Carlos, Papavasileiou, Evgenia, Prokop, Mathias, Saletta, Marco, Schaefer-Prokop, Cornelia M, Scholten, Ernst T., Scholten, Luuk, Snoeren, Miranda M., Torres, Ernesto Lopez, Vandemeulebroucke, Jef, Walasek, Nicole, Zuidhof, Guido C.A., Ginneken, Bram van, and Jacobs, Colin
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- 2017
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6. Computer aided detection of tuberculosis on chest radiographs: An evaluation of the CAD4TB v6 system
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Murphy, Keelin, Habib, Shifa Salman, Zaidi, Syed Mohammad Asad, Khowaja, Saira, Khan, Aamir, Melendez, Jaime, Scholten, Ernst T., Amad, Farhan, Schalekamp, Steven, Verhagen, Maurits, Philipsen, Rick H. H. M., Meijers, Annet, and van Ginneken, Bram
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- 2020
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7. Malignancy estimation of Lung-RADS criteria for subsolid nodules on CT: accuracy of low and high risk spectrum when using NLST nodules
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Chung, Kaman, Jacobs, Colin, Scholten, Ernst T., Mets, Onno M., Dekker, Irma, Prokop, Mathias, van Ginneken, Bram, and Schaefer-Prokop, Cornelia M.
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- 2017
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8. Characteristics of Lung Cancers Detected by Computer Tomography Screening in the Randomized NELSON Trial
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Horeweg, Nanda, van der Aalst, Carlijn M., Thunnissen, Erik, Nackaerts, Kristiaan, Weenink, Carla, Groen, Harry J. M., Lammers, Jan-Willem J., Aerts, Joachim G., Scholten, Ernst T., van Rosmalen, Joost, Mali, Willem, Oudkerk, Matthijs, and de Koning, Harry J.
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- 2013
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9. Explainable emphysema detection on chest radiographs with deep learning.
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Çallı, Erdi, Murphy, Keelin, Scholten, Ernst T., Schalekamp, Steven, and van Ginneken, Bram
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CHEST X rays ,DEEP learning ,PULMONARY emphysema ,RADIOLOGISTS - Abstract
We propose a deep learning system to automatically detect four explainable emphysema signs on frontal and lateral chest radiographs. Frontal and lateral chest radiographs from 3000 studies were retrospectively collected. Two radiologists annotated these with 4 radiological signs of pulmonary emphysema identified from the literature. A patient with ≥2 of these signs present is considered emphysema positive. Using separate deep learning systems for frontal and lateral images we predict the presence of each of the four visual signs and use these to determine emphysema positivity. The ROC and AUC results on a set of 422 held-out cases, labeled by both radiologists, are reported. Comparison with a black-box model which predicts emphysema without the use of explainable visual features is made on the annotations from both radiologists, as well as the subset that they agreed on. DeLong's test is used to compare with the black-box model ROC and McNemar's test to compare with radiologist performance. In 422 test cases, emphysema positivity was predicted with AUCs of 0.924 and 0.946 using the reference standard from each radiologist separately. Setting model sensitivity equivalent to that of the second radiologist, our model has a comparable specificity (p = 0.880 and p = 0.143 for each radiologist respectively). Our method is comparable with the black-box model with AUCs of 0.915 (p = 0.407) and 0.935 (p = 0.291), respectively. On the 370 cases where both radiologists agreed (53 positives), our model achieves an AUC of 0.981, again comparable to the black-box model AUC of 0.972 (p = 0.289). Our proposed method can predict emphysema positivity on chest radiographs as well as a radiologist or a comparable black-box method. It additionally produces labels for four visual signs to ensure the explainability of the result. The dataset is publicly available at https://doi.org/10.5281/zenodo.6373392. [ABSTRACT FROM AUTHOR]
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- 2022
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10. Management of Lung Nodules Detected by Volume CT Scanning
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van Klaveren, Rob J., Oudkerk, Matthijs, Prokop, Mathias, Scholten, Ernst T., Nackaerts, Kristiaan, Vernhout, Rene, van Iersel, Carola A., van den Bergh, Karien A.M., vanʼt Westeinde, Susan, van der Aalst, Carlijn, Thunnissen, Erik, Xu, Dong Ming, Wang, Ying, Zhao, Yingru, Gietema, Hester A., de Hoop, Bart-Jan, Groen, Harry J.M., de Bock, Geertruida H., van Ooijen, Peter, Weenink, Carla, Verschakelen, Johny, Lammers, Jan-Willem J., Timens, Wim, Willebrand, Dik, Vink, Aryan, Mali, Willem, and de Koning, Harry J.
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- 2009
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11. Association between the number and size of intrapulmonary lymph nodes and chronic obstructive pulmonary disease severity.
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Schreuder, Anton, Jacobs, Colin, Scholten, Ernst T., Prokop, Mathias, van Ginneken, Bram, Lynch, David A., and Schaefer-Prokop, Cornelia M.
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OBSTRUCTIVE lung diseases ,LYMPH nodes - Abstract
Purpose. One of the main pathophysiological mechanisms of chronic obstructive pulmonary disease is inflammation, which has been associated with lymphadenopathy. Intrapulmonary lymph nodes can be identified on CT as perifissural nodules (PFN). We investigated the association between the number and size of PFNs and measures of COPD severity. Materials and Methods. CT images were obtained from COPDGene. 50 subjects were randomly selected per GOLD stage (0 to 4), GOLD-unclassified, and never-smoker groups and allocated to either "Healthy," "Mild," or "Moderate/severe" groups. 26/350 (7.4%) subjects had missing images and were excluded. Supported by computer-aided detection, a trained researcher prelocated non-calcified opacities larger than 3 mm in diameter. Included lung opacities were classified independently by two radiologists as either "PFN," "not a PFN," "calcified," or "not a nodule"; disagreements were arbitrated by a third radiologist. Ordinal logistic regression was performed as the main statistical test. Results. A total of 592 opacities were included in the observer study. A total of 163/592 classifications (27.5%) required arbitration. A total of 17/592 opacities (2.9%) were excluded from the analysis because they were not considered nodular, were calcified, or all three radiologists disagreed. A total of 366/575 accepted nodules (63.7%) were considered PFNs. A maximum of 10 PFNs were found in one image; 154/324 (47.5%) contained no PFNs. The number of PFNs per subject did not differ between COPD severity groups (p = 0.50). PFN short-axis diameter could significantly distinguish between the Mild and Moderate/severe groups, but not between the Healthy and Mild groups (p=0.021). Conclusions. There is no relationship between PFN count and COPD severity. There may be a weak trend of larger intrapulmonary lymph nodes among patients with more advanced stages of COPD. [ABSTRACT FROM AUTHOR]
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- 2020
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12. Brock malignancy risk calculator for pulmonary nodules: validation outside a lung cancer screening population.
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Chung, Kaman, Mets, Onno M., Gerke, Paul K., Jacobs, Colin, den Harder, Annemarie M., Scholten, Ernst T., Prokop, Mathias, de Jong, Pim A., van Ginneken, Bram, and Schaefer-Prokop, Cornelia M.
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PULMONARY nodules ,LUNG cancer ,COMPUTED tomography ,CANCER ,DIAGNOSIS ,LUNG tumors ,SOLITARY pulmonary nodule ,COMPARATIVE studies ,RESEARCH methodology ,MEDICAL cooperation ,RESEARCH ,RISK assessment ,EVALUATION research ,PREDICTIVE tests ,CASE-control method ,RECEIVER operating characteristic curves ,EARLY detection of cancer - Abstract
Objective: To assess the performance of the Brock malignancy risk model for pulmonary nodules detected in routine clinical setting.Methods: In two academic centres in the Netherlands, we established a list of patients aged ≥40 years who received a chest CT scan between 2004 and 2012, resulting in 16 850 and 23 454 eligible subjects. Subsequent diagnosis of lung cancer until the end of 2014 was established through linking with the National Cancer Registry. A nested case-control study was performed (ratio 1:3). Two observers used semiautomated software to annotate the nodules. The Brock model was separately validated on each data set using ROC analysis and compared with a solely size-based model.Results: After the annotation process the final analysis included 177 malignant and 695 benign nodules for centre A, and 264 malignant and 710 benign nodules for centre B. The full Brock model resulted in areas under the curve (AUCs) of 0.90 and 0.91, while the size-only model yielded significantly lower AUCs of 0.88 and 0.87, respectively (p<0.001). At 10% malignancy risk, the threshold suggested by the British Thoracic Society, sensitivity of the full model was 75% and 81%, specificity was 85% and 84%, positive predictive values were 14% and 10% at negative predictive value (NPV) of 99%. The optimal threshold was 6% for centre A and 8% for centre B, with NPVs >99%.Discussion: The Brock model shows high predictive discrimination of potentially malignant and benign nodules when validated in an unselected, heterogeneous clinical population. The high NPV may be used to decrease the number of nodule follow-up examinations. [ABSTRACT FROM AUTHOR]- Published
- 2018
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13. Lung cancer risk to personalise annual and biennial follow-up computed tomography screening.
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Schreuder, Anton, Schaefer-Prokop, Cornelia M., Scholten, Ernst T., Jacobs, Colin, Prokop, Mathias, and Van Ginneken, Bram
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LUNG cancer ,TOMOGRAPHY ,EARLY detection of cancer ,CANCER diagnosis ,LUNGS - Abstract
Background: All lung cancer CT screening trials used fixed follow-up intervals, which may not be optimal. We developed new lung cancer risk models for personalising screening intervals to 1 year or 2 years, and compared these with existing models.Methods: We included participants in the CT arm of the National Lung Screening Trial (2002-2010) who underwent a baseline scan and a first annual follow-up scan and were not diagnosed with lung cancer in the first year. True and false positives and the area under the curve of each model were calculated. Internal validation was performed using bootstrapping.Results: Data from 24 542 participants were included in the analysis. The accuracy was 0.785, 0.693, 0.697, 0.666 and 0.727 for the polynomial, patient characteristics, diameter, Patz and PanCan models, respectively. Of the 24 542 participants included, 174 (0.71%) were diagnosed with lung cancer between the first and the second annual follow-ups. Using the polynomial model, 2558 (10.4%, 95% CI 10.0% to 10.8%), 7544 (30.7%, 30.2% to 31.3%), 10 947 (44.6%, 44.0% to 45.2%), 16 710 (68.1%, 67.5% to 68.7%) and 20 023 (81.6%, 81.1% to 92.1%) of the 24 368 participants who did not develop lung cancer in the year following the first follow-up screening round could have safely skipped it, at the expense of delayed diagnosis of 0 (0.0%, 0.0% to 2.7%), 8 (4.6%, 2.2% to 9.2%), 17 (9.8%, 6.0% to 15.4%), 44 (25.3%, 19.2% to 32.5%) and 70 (40.2%, 33.0% to 47.9%) of the 174 lung cancers, respectively.Conclusions: The polynomial model, using both patient characteristics and baseline scan morphology, was significantly superior in assigning participants to 1-year or 2-year screening intervals. Implementing personalised follow-up intervals would enable hundreds of participants to skip a screening round per lung cancer diagnosis delayed. [ABSTRACT FROM AUTHOR]- Published
- 2018
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14. Visual discrimination of screen-detected persistent from transient subsolid nodules: An observer study.
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Chung, Kaman, Ciompi, Francesco, Scholten, Ernst T., Goo, Jin Mo, Prokop, Mathias, Jacobs, Colin, van Ginneken, Bram, and Schaefer-Prokop, Cornelia M.
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LUNG radiography ,VISUAL discrimination ,COMPUTED tomography - Abstract
Purpose: To evaluate whether, and to which extent, experienced radiologists are able to visually correctly differentiate transient from persistent subsolid nodules from a single CT examination alone and to determine CT morphological features to make this differentiation. Materials and methods: We selected 86 transient and 135 persistent subsolid nodules from the National Lung Screening Trial (NLST) database. Four experienced radiologists visually assessed a predefined list of morphological features and gave a final judgment on a continuous scale (0–100). To assess observer performance, area under the receiver operating characteristic (ROC) curve was calculated. Statistical differences of morphological features between transient and persistent lesions were calculated using Chi-square. Inter-observer agreement of morphological features was evaluated by percentage agreement. Results: Forty-nine lesions were excluded by at least 2 observers, leaving 172 lesions for analysis. On average observers were able to differentiate transient from persistent subsolid nodules ≥ 10 mm with an area under the curve of 0.75 (95% CI 0.67–0.82). Nodule type, lesion margin, presence of a well-defined border, and pleural retraction showed significant differences between transient and persistent lesions in two observers. Average pair-wise percentage agreement for these features was 81%, 64%, 47% and 89% respectively. Agreement for other morphological features varied from 53% to 95%. Conclusion: The visual capacity of experienced radiologists to differentiate persistent and transient subsolid nodules is moderate in subsolid nodules larger than 10 mm. Performance of the visual assessment of CT morphology alone is not sufficient to generally abandon a short-term follow-up for subsolid nodules. [ABSTRACT FROM AUTHOR]
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- 2018
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15. Automatic Pulmonary Artery-Vein Separation and Classification in Computed Tomography Using Tree Partitioning and Peripheral Vessel Matching.
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Charbonnier, Jean-Paul, Brink, Monique, Ciompi, Francesco, Scholten, Ernst T., Schaefer-Prokop, Cornelia M., and van Rikxoort, Eva M.
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COMPUTED tomography ,TOMOGRAPHY image quality ,VENOGRAPHY ,IMAGE segmentation ,PULMONARY artery ,IMAGE analysis - Abstract
We present a method for automatic separation and classification of pulmonary arteries and veins in computed tomography. Our method takes advantage of local information to separate segmented vessels, and global information to perform the artery-vein classification. Given a vessel segmentation, a geometric graph is constructed that represents both the topology and the spatial distribution of the vessels. All nodes in the geometric graph where arteries and veins are potentially merged are identified based on graph pruning and individual branching patterns. At the identified nodes, the graph is split into subgraphs that each contain only arteries or veins. Based on the anatomical information that arteries and veins approach a common alveolar sag, an arterial subgraph is expected to be intertwined with a venous subgraph in the periphery of the lung. This relationship is quantified using periphery matching and is used to group subgraphs of the same artery-vein class. Artery-vein classification is performed on these grouped subgraphs based on the volumetric difference between arteries and veins. A quantitative evaluation was performed on 55 publicly available non-contrast CT scans. In all scans, two observers manually annotated randomly selected vessels as artery or vein. Our method was able to separate and classify arteries and veins with a median accuracy of 89%, closely approximating the inter-observer agreement. All CT scans used in this study, including all results of our system and all manual annotations, are publicly available at “xlink:type="simple" xlink:href="http://arteryvein.grand-challenge.org" xmlns:xlink="http://www.w3.org/1999/xlink"http://arteryvein.grand-challenge.org”. [ABSTRACT FROM PUBLISHER]
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- 2016
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16. CT-Detected Subsolid Nodules: A Predictor of Lung Cancer Development at Another Location?
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Schreuder, Anton, Prokop, Mathias, Scholten, Ernst T., Mets, Onno M., Chung, Kaman, Mohamed Hoesein, Firdaus A. A., Jacobs, Colin, and Schaefer-Prokop, Cornelia M.
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SOLITARY pulmonary nodule ,ACADEMIC medical centers ,LUNG tumors ,REGRESSION analysis ,RISK assessment ,CANCER patients ,COMPUTED tomography ,TUMOR markers ,LONGITUDINAL method ,DISEASE risk factors - Abstract
Simple Summary: The risk assessment of pulmonary nodules on chest computed tomography (CT) is key to the early detection of lung cancer. Whereas a nodule's morphological characteristics are strong predictors of malignancy for that individual nodule, it remains unclear whether the frequency and CT features of pulmonary nodules contribute to the prediction accuracy of future development of LC in another location. This was found by performing risk prediction modelling using age, sex, and CT measures from lung-cancer-free scans as predictors. We found that a greater number of part-solid and ground-glass nodules in the earliest scan was linearly associated with a higher risk of lung cancer developing in another location in the future. There were also indications that CT biomarkers of other pulmonary and heart diseases are risk factors for lung cancer. Our findings endorse the utilization of information from the entire scan to improve the accuracy of lung risk assessment. The purpose of this case–cohort study was to investigate whether the frequency and computed tomography (CT) features of pulmonary nodules posed a risk for the future development of lung cancer (LC) at a different location. Patients scanned between 2004 and 2012 at two Dutch academic hospitals were cross-linked with the Dutch Cancer Registry. All patients who were diagnosed with LC by 2014 and a random selection of LC-free patients were considered. LC patients who were determined to be LC-free at the time of the scan and all LC-free patients with an adequate scan were included. The nodule count and types (solid, part-solid, ground-glass, and perifissural) were recorded per scan. Age, sex, and other CT measures were included to control for confounding factors. The cohort included 163 LC patients and 1178 LC-free patients. Cox regression revealed that the number of ground-glass nodules and part-solid nodules present were positively correlated to future LC risk. The area under the receiver operating curve of parsimonious models with and without nodule type information were 0.827 and 0.802, respectively. The presence of subsolid nodules in a clinical setting may be a risk factor for future LC development in another pulmonary location in a dose-dependent manner. Replication of the results in screening cohorts is required for maximum utility of these findings. [ABSTRACT FROM AUTHOR]
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- 2021
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17. CT before and after ERCP: detection of pancreatic pseudotumor, asymptomatic retroperitoneal perforation, and duodenal diverticulum
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de Vries, J.Hans, Duijm, Lucien E.M., Dekker, Willem, Guit, Gerard L., Ferwerda, Jaap, and Scholten, Ernst T.
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- 1997
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18. Role of baseline nodule density and changes in density and nodule features in the discrimination between benign and malignant solid indeterminate pulmonary nodules
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Xu, Dong Ming, van Klaveren, Rob J., de Bock, Geertruida H., Leusveld, Anne L.M., Dorrius, Monique D., Zhao, Yingru, Wang, Ying, de Koning, Harry J., Scholten, Ernst T., Verschakelen, Johny, Prokop, Mathias, and Oudkerk, Matthijs
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RETROSPECTIVE studies , *LUNG cancer , *MEDICAL screening , *CANCER tomography , *MORPHOLOGY , *MEDICAL radiology - Abstract
Abstract: Purpose: To retrospectively evaluate whether baseline nodule density or changes in density or nodule features could be used to discriminate between benign and malignant solid indeterminate nodules. Materials and methods: Solid indeterminate nodules between 50 and 500mm3 (4.6–9.8mm) were assessed at 3 and 12 months after baseline lung cancer screening (NELSON study). Nodules were classified based on morphology (spherical or non-spherical), shape (round, polygonal or irregular) and margin (smooth, lobulated, spiculated or irregular). The mean CT density of the nodule was automatically generated in Hounsfield units (HU) by the Lungcare© software. Results: From April 2004 to July 2006, 7310 participants underwent baseline screening. In 312 participants 372 solid purely intra-parenchymal nodules were found. Of them, 16 (4%) were malignant. Benign nodules were 82.8mm3 (5.4mm) and malignant nodules 274.5mm3 (8.1mm) (p =0.000). Baseline CT density for benign nodules was 42.7HU and for malignant nodules −2.2HU (p =ns). The median change in density for benign nodules was −0.1HU and for malignant nodules 12.8HU (p <0.05). Compared to benign nodules, malignant nodules were more often non-spherical, irregular, lobulated or spiculated at baseline, 3-month and 1-year follow-up (p <0.0001). In the majority of the benign and malignant nodules there was no change in morphology, shape and margin during 1 year of follow-up (p =ns). Conclusion: Baseline nodule density and changes in nodule features cannot be used to discriminate between benign and malignant solid indeterminate pulmonary nodules, but an increase in density is suggestive for malignancy and requires a shorter follow-up or a biopsy. [Copyright &y& Elsevier]
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- 2009
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19. Limited value of shape, margin and CT density in the discrimination between benign and malignant screen detected solid pulmonary nodules of the NELSON trial
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Xu, Dong Ming, van Klaveren, Rob J., de Bock, Geertruida H., Leusveld, Anne, Zhao, Yingru, Wang, Ying, Vliegenthart, Rozemarijn, de Koning, Harry J., Scholten, Ernst T., Verschakelen, Johny, Prokop, Mathias, and Oudkerk, Matthijs
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LUNG cancer , *MULTIVARIATE analysis , *DIAGNOSIS , *DECISION making - Abstract
Abstract: Purpose: To evaluate prospectively the value of size, shape, margin and density in discriminating between benign and malignant CT screen detected solid non-calcified pulmonary nodules. Material and methods: This study was institutional review board approved. For this study 405 participants of the NELSON lung cancer screening trial with 469 indeterminate or potentially malignant solid pulmonary nodules (>50mm3) were selected. The nodules were classified based on size, shape (round, polygonal, irregular) and margin (smooth, lobulated, spiculated). Mean nodule density and nodule volume were automatically generated by software. Analyses were performed by univariate and multivariate logistic regression. Results were presented as likelihood ratios (LR) with 95% confidence intervals (CI). Receiver operating characteristic analysis was performed for mean density as predictor for lung cancer. Results: Of the 469 nodules, 387 (83%) were between 50 and 500mm3, 82 (17%) >500mm3, 59 (13%) malignant, 410 (87%) benign. The median size of the nodules was 103mm3 (range 50–5486mm3). In multivariate analysis lobulated nodules had LR of 11 compared to smooth; spiculated nodules a LR of 7 compared to smooth; irregular nodules a LR of 6 compared to round and polygonal; volume a LR of 3. The mean nodule CT density did not predict the presence of lung cancer (AUC 0.37, 95% CI 0.32–0.43). Conclusion: In solid non-calcified nodules larger than 50mm3, size and to a lesser extent a lobulated or spiculated margin and irregular shape increased the likelihood that a nodule was malignant. Nodule density had no discriminative power. [Copyright &y& Elsevier]
- Published
- 2008
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