13 results on '"Polania, Jose"'
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2. Root traits and their potential links to plant ideotypes to improve drought resistance in common bean
- Author
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Polania, Jose, Poschenrieder, Charlotte, Rao, Idupulapati, and Beebe, Stephen
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- 2017
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3. Physiological traits associated with drought resistance in Andean and Mesoamerican genotypes of common bean (Phaseolus vulgaris L.)
- Author
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Polania, Jose, Rao, Idupulapati M., Cajiao, Cesar, Rivera, Mariela, Raatz, Bodo, and Beebe, Stephen
- Published
- 2016
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4. Contrasting Phaseolus Crop Water Use Patterns and Stomatal Dynamics in Response to Terminal Drought.
- Author
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Polania, Jose A., Salazar-Chavarría, Violeta, Gonzalez-Lemes, Ingrid, Acosta-Maspons, Alexis, Chater, Caspar C. C., and Covarrubias, Alejandra A.
- Subjects
COMMON bean ,BEANS ,WATER use ,STOMATA ,WATER efficiency ,DROUGHTS - Abstract
Terminal drought stress affects more than half of the areas planted with common bean (Phaseolus vulgaris), the main food legume globally, generating severe yield losses. Phenotyping water deficit responses and water use are central strategies to develop improved terminal drought resilience. The exploration and exploitation of genetic diversity in breeding programs are gaining importance, with a particular interest in related species with great adaptation to biotic and abiotic factors. This is the case with tepary beans (Phaseolus acutifolius), a bean that evolved and was domesticated in arid conditions and is considered well adapted to drought and heat stress. Under greenhouse conditions, using one genotype of tepary beans (resistant to drought) and two of common beans (one resistant and one susceptible to terminal drought), we evaluated phenotypic differences in traits such as water use efficiency (WUE), transpiration efficiency, rate of photosynthesis, photosynthetic efficiency, stomatal density, stomatal index, stomatal size, and the threshold for transpiration decline under well-watered and terminal drought conditions. Our results indicate two different water use strategies in drought-resistant genotypes: one observed in common bean aimed at conserving soil water by closing stomata early, inhibiting stomatal development, and limiting growth; and the other observed in tepary bean, where prolonged stomatal opening and higher carbon fixation, combined with no changes in stomata distribution, lead to higher biomass accumulation. Strategies that contribute to drought adaptation combined with other traits, such as greater mobilization of photoassimilates to the formation of reproductive structures, confer bean drought resistance and are useful targets in breeding programs. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
5. Effect of Drought and Low P on Yield and Nutritional Content in Common Bean.
- Author
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Smith, Millicent R., Dinglasan, Eric, Veneklaas, Erik, Polania, Jose, Rao, Idupulapati M., Beebe, Stephen E., and Merchant, Andrew
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COMMON bean ,DROUGHTS ,ELECTRON transport ,CARBON isotopes ,ISOTOPIC fractionation ,WATER purification ,PLANT development - Abstract
Common bean (Phaseolus vulgaris L.) production in the tropics typically occurs in rainfed systems on marginal lands where yields are low, primarily as a consequence of drought and low phosphorus (P) availability in soil. This study aimed to investigate the physiological and chemical responses of 12 bush bean genotypes for adaptation to individual and combined stress factors of drought and low P availability. Water stress and P deficiency, both individually and combined, decreased seed weight and aboveground biomass by ∼80%. Water deficit and P deficiency decreased photosynthesis and stomatal conductance during plant development. Maximum rates of carboxylation, electron transport, and triose phosphate utilization were superior for two common bean genotypes (SEF60 and NCB226) that are better adapted to combined stress conditions of water deficit and low P compared to the commercial check (DOR390). In response to water deficit treatment, carbon isotope fractionation in the leaf tissue decreased at all developmental stages. Within the soluble leaf fraction, combined water deficit and low P, led to significant changes in the concentration of key nutrients and amino acids, whereas no impact was detected in the seed. Our results suggest that common bean genotypes have a degree of resilience in yield development, expressed in traits such as pod harvest index, and conservation of nutritional content in the seed. Further exploration of the chemical and physiological traits identified here will enhance the resilience of common bean production systems in the tropics. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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6. Genetic Correlation Between Fe and Zn Biofortification and Yield Components in a Common Bean (Phaseolus vulgaris L.).
- Author
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Diaz, Santiago, Polania, Jose, Ariza-Suarez, Daniel, Cajiao, Cesar, Grajales, Miguel, Raatz, Bodo, and Beebe, Stephen E.
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GENETIC correlations ,COMMON bean ,BIOFORTIFICATION ,LOCUS (Genetics) ,GENOME-wide association studies ,GOLDEN ratio - Abstract
Common bean (Phaseolus vulgaris L.) is the most important legume for direct human consumption worldwide. It is a rich and relatively inexpensive source of proteins and micronutrients, especially iron and zinc. Bean is a target for biofortification to develop new cultivars with high Fe/Zn levels that help to ameliorate malnutrition mainly in developing countries. A strong negative phenotypic correlation between Fe/Zn concentration and yield is usually reported, posing a significant challenge for breeders. The objective of this study was to investigate the genetic relationship between Fe/Zn. We used Quantitative Trait Loci (QTLs) mapping and Genome-Wide Association Studies (GWAS) analysis in three bi-parental populations that included biofortified parents, identifying genomic regions associated with yield and micromineral accumulation. Significant negative correlations were observed between agronomic traits (pod harvest index, PHI; pod number, PdN; seed number, SdN; 100 seed weight, 100SdW; and seed per pod, Sd/Pd) and micronutrient concentration traits (SdFe and SdZn), especially between pod harvest index (PHI) and SdFe and SdZn. PHI presented a higher correlation with SdN than PdN. Seventy-nine QTLs were identified for the three populations: 14 for SdFe, 12 for SdZn, 13 for PHI, 11 for SdN, 14 for PdN, 6 for 100SdW, and 9 for Sd/Pd. Twenty-three hotspot regions were identified in which several QTLs were co-located, of which 13 hotpots displayed QTL of opposite effect for yield components and Fe/Zn accumulation. In contrast, eight QTLs for SdFe and six QTLs for SdZn were observed that segregated independently of QTL of yield components. The selection of these QTLs will enable enhanced levels of Fe/Zn and will not affect the yield performance of new cultivars focused on biofortification. [ABSTRACT FROM AUTHOR]
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- 2022
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7. Neural network ARMAX model for a Furuta pendulum.
- Author
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Acosta Villamil, David, Noguera Polania, Jose, Pacheco Bolivar, Jovanny, and Sanjuan Mejia, Marco
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ARTIFICIAL neural networks , *SYSTEM identification , *MECHATRONICS , *SEGWAY Personal Transporter (Electric transportation device) , *NEURAL computers , *DYNAMICAL systems , *INVERTED pendulum (Control theory) , *ROBOTICS - Abstract
The rotational inverted pendulum or Furuta Pendulum is a mechatronic system used by control engineers to explore a various dynamic modeling and control schemes. Due to its nonlinear nature, open-loop instability, and because it is an under-actuated system (more degrees of freedom than actuators), which is the basis for the design of vehicles such as the Segway, the self-balancing scooter, hoverboard, or selfbalancing board, among others. The authors present a model for the Furuta Pendulum using the equations of Euler-Lagrange and the methodology to identify a black-box model by training an NNARMAX (Neural Network Auto-Regressive Moving Average with exogenous inputs). The results show that two interconnected MISO-NNARMAX estimates 10-step-ahead predictions accurately for the horizontal and vertical angles. [ABSTRACT FROM AUTHOR]
- Published
- 2021
8. Using Carbon Isotope Discrimination to Assess Genotypic Differences in Drought Resistance of Parental Lines of Common Bean.
- Author
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Sanz‐Saez, Alvaro, Maw, Michael J.W., Polania, Jose A., Rao, Idupulapati M., Beebe, Stephen E., and Fritschi, Felix B.
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COMMON bean ,CARBON isotopes ,DROUGHTS ,WATER efficiency ,CROP yields ,WATER supply - Abstract
Accurate assessment of crop water uptake (WU) and water use efficiency (WUE) is not easy under field conditions. Carbon isotope discrimination (Δ13C) has been used as a surrogate of WUE to examine crop yield responses to drought and its relationship with WU and WUE. A 2‐yr study was conducted (i) to characterize genotypic variation in Δ13C, grain yield, and other physiological parameters in common bean (Phaseolus vulgaris L.) parental lines, and (ii) to examine the relationships between grain Δ13C, shoot Δ13C, and grain yield under well‐watered and terminal drought stress conditions. All measured plant traits were strongly influenced by water availability, and genotypic differences in grain yield, shoot Δ13C, and grain Δ13C were found in both watered and terminal drought stress environments. The parental lines were classified into two drought adaptation groups, drought resistant and drought sensitive, based on a yield drought index. High yields under drought conditions were related to (i) greater water uptake, as indicated by high Δ13C in genotypes previously shown to have deeper roots (e.g., SEA 5 and BAT 477), and (ii) increased WUE, denoted by lower Δ13C and greater pod harvest index (PHI) (e.g., SER 16). Coupling of Δ13C measurements with measured yield and yield components analyses, such as PHI, provided an avenue to distinguish different physiological traits among drought resistant genotypes underlying adaptation to water deficit stress. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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9. Field drought conditions impact yield but not nutritional quality of the seed in common bean (Phaseolus vulgaris L.).
- Author
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Smith, Millicent R., Veneklaas, Erik, Polania, Jose, Rao, Idupulapati M., Beebe, Stephen E., and Merchant, Andrew
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COMMON bean ,FAVA bean ,SEED quality ,DROUGHTS ,LEAF area ,PLANT physiology - Abstract
Drought substantially limits seed yield of common bean (Phaseolus vulgaris L.) in the tropics. Understanding the interaction of drought on yield and the nutrient concentration of the seed is vital in order to supply nutrition to the millions of consumers who rely on common bean as a staple crop. Nevertheless, the impact of drought on common bean for both yield and nutrient concentration has not yet been concurrently investigated in a field environment. Using 10 bred lines developed by CIAT and its partners for their improved adaptation to drought and phosphorus deficiency, this study characterised the impact of drought on yield and nutrient concentration for leaf and seed tissue of common bean grown in the field. Drought significantly reduced leaf area (by ~50%), harvest index (by ~60%), yield (by ~70%), seed weight (by ~25%) and enriched carbon isotope abundance (δ
13 C) in the seed. Within the soluble leaf fraction, drought significantly decreased the concentration of mineral nutrients and amino acids, whereas no negative effect on the concentration of nutrients and amino acids was detected within the seed. Genotypic variation in nutrient concentration in both the leaf and seed tissue was identified and should be explored further to identify traits that may confer tolerance to abiotic stress. [ABSTRACT FROM AUTHOR]- Published
- 2019
- Full Text
- View/download PDF
10. Shoot and Root Traits Contribute to Drought Resistance in Recombinant Inbred Lines of MD 23-24 x SEA 5 of Common Bean.
- Author
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Polania, Jose, Rao, Idupulapati M., Cajiao, Cesar, Grajales, Miguel, Rivera, Mariela, Velasquez, Federico, Raatz, Bodo, and Beebe, Stephen E.
- Subjects
DROUGHT tolerance ,COMMON bean ,PLANT shoots - Abstract
Drought is the major abiotic stress factor limiting yield of common bean (Phaseolus vulgaris L.) in smallholder systems in Latin America and eastern and southern Africa; where it is a main source of protein in the daily diet. Identification of shoot and root traits associated with drought resistance contributes to improving the process of designing bean genotypes adapted to drought. Field and greenhouse studies were conducted at the International Center for Tropical Agriculture (CIAT), Palmira, Colombia to determine the relationship between grain yield and different shoot and root traits using a recombinant inbred lines (RILs) population (MD23-24 x SEA 5) of common bean. The main objectives of this study were to identify: (i) specific shoot and root morpho-physiological traits that contribute to improved resistance to drought and that could be useful as selection criteria in breeding beans for drought resistance; and (ii) superior genotypes with desirable shoot and root traits that could serve as parents in breeding programs that are aimed at improving drought resistance. A set of 121 bean genotypes (111 RILs, 2 parents, 8 checks) belonging to the Mesoamerican gene pool and one cowpea variety were evaluated under field conditions with two levels of water supply (irrigated and rainfed) over three seasons. To complement field studies, a greenhouse study was conducted using plastic cylinders with soil inserted into PVC pipes, to determine the relationship between grain yield obtained under field conditions with different root traits measured under greenhouse conditions. Resistance to drought stress was positively associated with a deeper and vigorous root system, better shoot growth, and superior mobilization of photosynthates to pod and seed production. The drought resistant lines differed in their root characteristics, some of them with a vigorous and deeper root system while others with a moderate to shallow root system. Among the shoot traits measured, pod harvest index, and seed number per area could serve as useful selection criteria for assessing sink strength and for genetic improvement of drought resistance in common bean. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
11. Estimation of phenotypic variability in symbiotic nitrogen fixation ability of common bean under drought stress using 15N natural abundance in grain.
- Author
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Polania, Jose, Poschenrieder, Charlotte, Rao, Idupulapati, and Beebe, Stephen
- Subjects
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PHENOTYPIC plasticity in plants , *NITROGEN fixation , *COMMON bean , *DROUGHTS , *SOIL fertility - Abstract
Common bean ( Phaseolus vulgaris L.) is the most important food legume, cultivated by small farmers and is usually exposed to unfavorable conditions with minimum use of inputs. Drought and low soil fertility, especially phosphorus and nitrogen (N) deficiencies, are major limitations to bean yield in smallholder systems. Beans can derive part of their required N from the atmosphere through symbiotic nitrogen fixation (SNF). Drought stress severely limits SNF ability of plants. The main objectives of this study were to: (i) test and validate the use of 15 N natural abundance in grain to quantify phenotypic differences in SNF ability for its implementation in breeding programs of common bean with bush growth habit aiming to improve SNF, and (ii) quantify phenotypic differences in SNF under drought to identify superior genotypes that could serve as parents. Field studies were conducted at CIAT-Palmira, Colombia using a set of 36 bean genotypes belonging to the Middle American gene pool for evaluation in two seasons with two levels of water supply (irrigated and drought stress). We used 15 N natural abundance method to compare SNF ability estimated from shoot tissue sampled at mid-pod filling growth stage vs. grain tissue sampled at harvest. Our results showed positive and significant correlation between nitrogen derived from the atmosphere (%Ndfa) estimated using shoot tissue at mid-pod filling and %Ndfa estimated using grain tissue at harvest. Both methods showed phenotypic variability in SNF ability under both drought and irrigated conditions and a significant reduction in SNF ability was observed under drought stress. We suggest that the method of estimating Ndfa using grain tissue (Ndfa-G) could be applied in bean breeding programs to improve SNF ability. Using this method of Ndfa-G, we identified four bean lines (RCB 593, SEA 15, NCB 226 and BFS 29) that combine greater SNF ability with greater grain yield under drought stress and these could serve as potential parents to further improve SNF ability of common bean. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
12. Effective Use of Water and Increased Dry Matter Partitioned to Grain Contribute to Yield of Common Bean Improved for Drought Resistance.
- Author
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Polania, Jose A., Poschenrieder, Charlotte, Beebe, Stephen, Rao, Idupulapati M., Bingcheng Xu, Acosta-Gallegos, Jorge Alberto, and Kelly, James
- Subjects
COMMON bean ,DROUGHT tolerance ,WATER efficiency - Abstract
Common bean (Phaseolus vulgaris L.) is the most important food legume in the diet of poor people in the tropics. Drought causes severe yield loss in this crop. Identification of traits associated with drought resistance contributes to improving the process of generating bean genotypes adapted to these conditions. Field studies were conducted at the International Center for Tropical Agriculture (CIAT), Palmira, Colombia, to determine the relationship between grain yield and different parameters such as effective use of water (EUW), canopy biomass, and dry partitioning indices (pod partitioning index, harvest index, and pod harvest index) in elite lines selected for drought resistance over the past decade. Carbon isotope discrimination (CID) was used for estimation of water use efficiency (WUE). The main objectives were: (i) to identify specific morpho-physiological traits that contribute to improved resistance to drought in lines developed over several cycles of breeding and that could be useful as selection criteria in breeding; and (ii) to identify genotypes with desirable traits that could serve as parents in the corresponding breeding programs. A set of 36 bean genotypes belonging to the Middle American gene pool were evaluated under field conditions with two levels of water supply (irrigated and drought) over two seasons. Eight bean lines (NCB 280, NCB 226, SEN 56, SCR 2, SCR 16, SMC 141, RCB 593, and BFS 67) were identified as resistant to drought stress. Resistance to terminal drought stress was positively associated with EUW combined with increased dry matter partitioned to pod and seed production and negatively associated with days to flowering and days to physiological maturity. Differences in genotypic response were observed between grain CID and grain yield under irrigated and drought stress. Based on phenotypic differences in CID, leaf stomatal conductance, canopy biomass, and grain yield under drought stress, the lines tested were classified into two groups, water savers and water spenders. Pod harvest index could be a useful selection criterion in breeding programs to select for drought resistance in common bean. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
13. Seedling root architecture and its relationship with seed yield across diverse environments in Phaseolus vulgaris.
- Author
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Strock, Christopher F., Burridge, James, Massas, Anica S.F., Beaver, James, Beebe, Stephen, Camilo, Samuel A., Fourie, Deidré, Jochua, Celestina, Miguel, Magalhaes, Miklas, Phillip N., Mndolwa, Eninka, Nchimbi-Msolla, Susan, Polania, Jose, Porch, Timothy G., Rosas, Juan Carlos, Trapp, Jennifer J., and Lynch, Jonathan P.
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SEED yield , *COMMON bean , *SEEDLINGS , *ABIOTIC environment , *ECOLOGY - Abstract
• Seedling root architecture is related to yield in some environments. • Gene pools and races vary significantly for root architecture. • Integrated root phenotypes are related to yield in some environments. • Seedling root architectural phenes are a valuable breeding targets. Seedling root phenotypes may have important impacts on fitness and are more easily measured than mature root phenotypes. We phenotyped the roots of 577 genotypes of common bean (Phaseolus vulgaris), representing the bulk of the genetic diversity for recent cultivars and landraces in this species. Root architectural phenotypes of seedlings germinated for nine days were compared to root architectural phenotypes in the field as well as seed yield across 51 environments with an array of abiotic stresses including drought, nutrient deficiency, and heat, as well as non-stress conditions. We observed repeatability ranging from 0.52–0.57 for measures of root phenotypes in seedlings, significant variation in root phene states between gene pools and races, relationships between seedling and field phenotypes, and varying correlations between seedling root phenes and seed yield under a variety of environmental conditions. Seed yield was significantly related to seedling basal root number in 22% of environments, seedling adventitious root abundance in 35% of environments, and seedling taproot length in 12% of environments. Cluster analysis grouped genotypes by their aggregated seedling root phenotype, and variation in seed yield among these clusters under non-stress, drought, and low fertility conditions was observed. These results highlight the existence and influence of integrated root phenotypes for adaptation to edaphic stress, and suggest root phenes have value as breeding targets under real-world conditions. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
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