3 results on '"Milne, TA"'
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2. Elevated propionate signalling drives Pde9a overexpression and contractile dysfunction through increased histone acetylation and propionylation.
- Author
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Park, KC, Crump, NT, Hulikova, A, Ford, KL, Louwman, N, Carnicer, R, Hauton, D, Koschinski, A, Mccullagh, J, Zaccolo, M, Krywawych, S, Milne, TA, and Swietach, P
- Subjects
HISTONE acetylation ,PROPIONATES ,NATRIURETIC peptides ,GENETIC overexpression ,HEART metabolism disorders ,HEART failure - Abstract
Funding Acknowledgements Type of funding sources: Private grant(s) and/or Sponsorship. Main funding source(s): British Heart Foundation and Propionic Acidemia Foundation Background In the heart, various metabolic pathways produce the three-carbon intermediate, propionate. This metabolite has been postulated to increase histone propionylation and acetylation (via deacetylase inhibition), and therefore affect transcription. Normally, propionate levels are kept low by propionyl-CoA carboxylase (PCC), but build-up has been reported in cardiometabolic diseases. The highest levels are attained in propionic acidaemia (PA; mutations in PCC), which also serves as a model for studying propionate biology [1]. Purpose To establish the effect of propionate on cardiac gene expression and physiology using a mouse model of elevated propionate/propionyl-CoA signalling. Methods Experiments were performed using either wild-type (WT) neonatal ventricular myocytes (NRVMs) treated with propionate in vitro, or the hypomorphic mouse model of PA (Pcca-/- A138T) [2]. IC-MS metabolomics was performed on methanol-extracted metabolites. RNA-sequencing was carried out on an Illumina HiSeq 4000. For chromatin immunoprecipitation (ChIP), chromatin was isolated from PFA-fixed ventricular tissue. cGMP levels were measured by the FRET-based sensor, cGi500. Ca2+ transients were imaged in isolated myocytes using FuraRed. Cine-MRI was performed in a 7 tesla MR scanner. Results PA mice had the metabolic signature of propionate accumulation in plasma and cardiac lysates (metabolomics). RNA-seq of ventricular lysates identified differentially expressed genes (DEGs), but the effect was more pronounced in females. Thus, subsequent experiments were performed in females. To determine which DEGs are likely a direct response to propionate, RNA-seq was performed on propionate-treated NRVMs. The most significant DEGs common to both datasets were upregulated Pde9a (cGMP-selective phosphodiesterase) and Mme (degrades natriuretic peptides). ChIP-qPCR for histone acylation in PA and WT hearts demonstrated increases in H3K27ac at Pde9a, and strikingly, increases in propionylation at Pde9a and Mme, indicating a mechanism for this transcriptional induction. Propionate-treated NRVMs show greater sensitivity of cGMP to pharmacological inhibition of PDE9A (measured by FRET), consistent with Pde9a induction. Such changes are expected to result in diastolic dysfunction [3]. Indeed, ventricular myocytes from PA mice had higher diastolic Ca2+. Cine-MRI confirmed contractile dysfunction in vivo, with PA mice manifesting increased end-systolic and end-diastolic volumes. Conclusions We demonstrate that cardiac elevations of the metabolic intermediate, propionate, increases histone modifications that drive transcriptional changes in the heart, including those involved in cyclic nucleotide signalling. We also present evidence for histone propionylation, which has not been described previously in the heart. Thus, using a mouse model of a rare metabolic disease, we show how propionate/propionyl-CoA signalling affects cardiac function through epigenetic changes. Open in new tab Download slide Elevated propionate signalling [ABSTRACT FROM AUTHOR]
- Published
- 2022
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3. RUNX1 Is a Key Target in t(4;11) Leukemias that Contributes to Gene Activation through an AF4-MLL Complex Interaction
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Wilkinson, AC, Ballabio, E, Geng, H, North, P, Tapia, M, Kerry, J, Biswas, D, Roeder, RG, Allis, CD, Melnick, A, de Bruijn, MFTR, and Milne, TA
- Subjects
Transcriptional Activation ,Chromatin Immunoprecipitation ,Oncogene Proteins ,Oncogene Proteins, Fusion ,Molecular Sequence Data ,Biology ,Models, Biological ,General Biochemistry, Genetics and Molecular Biology ,Article ,Translocation, Genetic ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Cell Line, Tumor ,Precursor B-Cell Lymphoblastic Leukemia-Lymphoma ,hemic and lymphatic diseases ,Humans ,Epigenetics ,Amino Acid Sequence ,lcsh:QH301-705.5 ,Gene ,neoplasms ,030304 developmental biology ,Cell Proliferation ,Genetics ,Regulation of gene expression ,0303 health sciences ,Leukemia ,Gene Expression Regulation, Leukemic ,Protein Stability ,Chromosomes, Human, Pair 11 ,Prognosis ,Fusion protein ,Treatment Outcome ,lcsh:Biology (General) ,RUNX1 ,chemistry ,Genetic Loci ,030220 oncology & carcinogenesis ,Core Binding Factor Alpha 2 Subunit ,Myeloid-Lymphoid Leukemia Protein ,Chromosomes, Human, Pair 4 ,Chromatin immunoprecipitation ,Protein Binding - Abstract
Summary The Mixed Lineage Leukemia (MLL) protein is an important epigenetic regulator required for the maintenance of gene activation during development. MLL chromosomal translocations produce novel fusion proteins that cause aggressive leukemias in humans. Individual MLL fusion proteins have distinct leukemic phenotypes even when expressed in the same cell type, but how this distinction is delineated on a molecular level is poorly understood. Here, we highlight a unique molecular mechanism whereby the RUNX1 gene is directly activated by MLL-AF4 and the RUNX1 protein interacts with the product of the reciprocal AF4-MLL translocation. These results support a mechanism of transformation whereby two oncogenic fusion proteins cooperate by activating a target gene and then modulating the function of its downstream product., Graphical Abstract Highlights ► A common set of target genes directly regulated by MLL-AF4 is identified ► RUNX1 is a target gene that is specifically upregulated in t(4;11) patients ► MLL-AF4 controls RUNX1 gene expression by stabilizing ENL and AF9 binding ► RUNX1 cooperates with an AF4-MLL complex to activate gene targets, Children and adults with acute leukemias caused by the mixed lineage leukemia (MLL) gene have very poor survival rates, most likely due to the fact that MLL is a regulator of epigenetic information. Milne and colleagues now show that a protein named RUNX1 cooperates with two different MLL mutations to alter the epigenetic information content of the cell, directly contributing to the poor prognosis of MLL-associated leukemias.
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