9 results on '"Joël Beaudouin"'
Search Results
2. Serial femtosecond crystallography on in vivo-grown crystals drives elucidation of mosquitocidal Cyt1Aa bioactivation cascade
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Guillaume Tetreau, Anne-Sophie Banneville, Elena A. Andreeva, Aaron S. Brewster, Mark S. Hunter, Raymond G. Sierra, Jean-Marie Teulon, Iris D. Young, Niamh Burke, Tilman A. Grünewald, Joël Beaudouin, Irina Snigireva, Maria Teresa Fernandez-Luna, Alister Burt, Hyun-Woo Park, Luca Signor, Jayesh A. Bafna, Rabia Sadir, Daphna Fenel, Elisabetta Boeri-Erba, Maria Bacia, Ninon Zala, Frédéric Laporte, Laurence Després, Martin Weik, Sébastien Boutet, Martin Rosenthal, Nicolas Coquelle, Manfred Burghammer, Duilio Cascio, Michael R. Sawaya, Mathias Winterhalter, Enrico Gratton, Irina Gutsche, Brian Federici, Jean-Luc Pellequer, Nicholas K. Sauter, and Jacques-Philippe Colletier
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Science - Abstract
Bacillus thuringiensis israelensis (Bti) produces the naturally-crystalline proteinaceous toxin Cyt1Aa that is toxic to mosquito larvae. Here the authors grow recombinant nanocrystals of the Cyt1Aa protoxin in vivo and use serial femtosecond crystallography to determine its structure at different redox and pH conditions and by combining their structural data with further biochemical, toxicological and biophysical analyses provide mechanistic insights into the Cyt1Aa bioactivation cascade.
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- 2020
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3. Single-Fluorescent Protein Reporters Allow Parallel Quantification of Natural Killer Cell-Mediated Granzyme and Caspase Activities in Single Target Cells
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Clarissa Liesche, Patricia Sauer, Isabel Prager, Doris Urlaub, Maren Claus, Roland Eils, Joël Beaudouin, and Carsten Watzl
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natural killer cells ,cytotoxic lymphocytes ,single-fluorescent protein reporters ,granzyme and caspase activity ,apoptosis and cell death ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Natural killer (NK) cells eliminate infected and tumorigenic cells through delivery of granzymes via perforin pores or by activation of caspases via death receptors. In order to understand how NK cells combine different cell death mechanisms, it is important to quantify target cell responses on a single cell level. However, currently existing reporters do not allow the measurement of several protease activities inside the same cell. Here, we present a strategy for the comparison of two different proteases at a time inside individual target cells upon engagement by NK cells. We developed single-fluorescent protein reporters containing the RIEAD or the VGPD cleavage site for the measurement of granzyme B activity. We show that these two granzyme B reporters can be applied in combination with caspase-8 or caspase-3 reporters. While we did not find that caspase-8 was activated by granzyme B, our method revealed that caspase-3 activity follows granzyme B activity with a delay of about 6 min. Finally, we illustrate the comparison of several different reporters for granzyme A, M, K, and H. The approach presented here is a valuable means for the investigation of the temporal evolution of cell death mediated by cytotoxic lymphocytes.
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- 2018
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4. Caspase-8 cleaves its substrates from the plasma membrane upon CD95-induced apoptosis
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S. Aschenbrenner, Maximilian Hörner, Roland Eils, Clarissa Liesche, and Joël Beaudouin
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Programmed cell death ,Receptor complex ,Calnexin ,Active Transport, Cell Nucleus ,Apoptosis ,Caspase 3 ,Caspase 6 ,Caspase 8 ,Substrate Specificity ,Mitochondrial Proteins ,Humans ,Amino Acid Sequence ,fas Receptor ,Cycloheximide ,Molecular Biology ,Caspase ,Fluorescent Dyes ,Original Paper ,biology ,Tumor Necrosis Factor-alpha ,Keratin-8 ,Cell Membrane ,Cell Biology ,Protein Structure, Tertiary ,Cell biology ,Enzyme Activation ,biology.protein ,Signal transduction ,BH3 Interacting Domain Death Agonist Protein ,HeLa Cells ,Signal Transduction - Abstract
Apoptosis occurs through a tightly regulated cascade of caspase activation. In the context of extrinsic apoptosis, caspase-8 is activated by dimerization inside a death receptor complex, cleaved by auto-proteolysis and subsequently released into the cytosol. This fully processed form of caspase-8 is thought to cleave its substrates BID and caspase-3. To test if the release is required for substrate cleavage, we developed a novel approach based on localization probes to quantitatively characterize the spatial-temporal activity of caspases in living single cells. Our study reveals that caspase-8 is significantly more active at the plasma membrane than within the cytosol upon CD95 activation. This differential activity is controlled by the cleavage of caspase-8 prodomain. As a consequence, targeting of caspase-8 substrates to the plasma membrane can significantly accelerate cell death. Subcellular compartmentalization of caspase-8 activity may serve to restrict enzymatic activity before mitochondrial pathway activation and offers new possibilities to interfere with apoptotic sensitivity of the cells.
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- 2013
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5. Four-dimensional imaging and quantitative reconstruction to analyse complex spatiotemporal processes in live cells
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Jan Ellenberg, Roland Eils, Daniel W. Gerlich, Matthias Gebhard, and Joël Beaudouin
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Time Factors ,Nuclear Envelope ,Biology ,Transfection ,Bioinformatics ,Cell Line ,Green fluorescent protein ,Bacterial Proteins ,Tubulin ,Image Processing, Computer-Assisted ,High spatial resolution ,Animals ,Cellular dynamics ,Topology (chemistry) ,Complex data type ,Cell Biology ,Chromatin ,Recombinant Proteins ,Rats ,Cell biology ,Models, Structural ,Luminescent Proteins ,Microscopy, Fluorescence ,Proof of concept ,Imaging technology ,Biological system - Abstract
Live-cell imaging technology using fluorescent proteins (green fluorescent protein and its homologues) has revolutionized the study of cellular dynamics. But tools that can quantitatively analyse complex spatiotemporal processes in live cells remain lacking. Here we describe a new technique--fast multi-colour four-dimensional imaging combined with automated and quantitative time-space reconstruction--to fill this gap. As a proof of principle, we apply this method to study the re-formation of the nuclear envelope in live cells. Four-dimensional imaging of three spectrally distinct fluorescent proteins is used to simultaneously visualize three different cellular compartments at high speed and with high spatial resolution. The highly complex data, comprising several thousand images from a single cell, were quantitatively reconstructed in time-space by software developed in-house. This analysis reveals quantitative and qualitative insights into the highly ordered topology of nuclear envelope formation, in correlation with chromatin expansion - results that would have been impossible to achieve by manual inspection alone. Our new technique will greatly facilitate study of the highly ordered dynamic architecture of eukaryotic cells.
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- 2001
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6. Tropical—parameter estimation and simulation of reaction–diffusion models based on spatio-temporal microscopy images
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Markus Ulrich, Stefan Hezel, Constantin Kappel, Jochen Ulrich, Joël Beaudouin, and Roland Eils
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Statistics and Probability ,Models, Biological ,Biochemistry ,Cell Physiological Phenomena ,Diffusion ,Software ,Image Interpretation, Computer-Assisted ,Protein Interaction Mapping ,Microscopy ,Reaction–diffusion system ,Computer Simulation ,Diffusion (business) ,Molecular Biology ,Simulation ,business.industry ,Estimation theory ,Computer Science Applications ,Computational Mathematics ,Microscopy, Fluorescence ,Computational Theory and Mathematics ,Environmental science ,business ,Biological system ,Algorithms ,Signal Transduction - Abstract
Summary: Tropical is a software for simulation and parameter estimation of reaction--diffusion models. Based on spatio-temporal microscopy images, Tropical estimates reaction and diffusion coefficients for user-defined models. Tropical allows the investigation of systems with an inhomogeneous distribution of molecules, making it well suited for quantitative analyses of microscopy experiments such as fluorescence recovery after photobleaching (FRAP). Availability: Tropical is available free of charge for academic use at http://www.dkfz.de/tbi/projects/modellingAndSimulationOfCelluarSystems/tropical.jsp after signing a material transfer agreement. Contact: r.eils@dkfz.de Supplementary information: http://www.dkfz.de/tbi/projects/modellingAndSimulationOfCelluarSystems/tropical.jsp
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- 2006
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7. 3D Cellular Architecture Modulates Tyrosine Kinase Activity, Thereby Switching CD95-Mediated Apoptosis to Survival
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Gülce S. Gülcüler Balta, Cornelia Monzel, Susanne Kleber, Joel Beaudouin, Emre Balta, Thomas Kaindl, Si Chen, Liang Gao, Meinolf Thiemann, Christian R. Wirtz, Yvonne Samstag, Motomu Tanaka, and Ana Martin-Villalba
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Biology (General) ,QH301-705.5 - Abstract
Summary: The death receptor CD95 is expressed in every cancer cell, thus providing a promising tool to target cancer. Activation of CD95 can, however, lead to apoptosis or proliferation. Yet the molecular determinants of CD95’s mode of action remain unclear. Here, we identify an optimal distance between CD95Ligand molecules that enables specific clustering of receptor-ligand pairs, leading to efficient CD95 activation. Surprisingly, efficient CD95 activation leads to apoptosis in cancer cells in vitro and increased tumor growth in vivo. We show that allowing a 3D aggregation of cancer cells in vitro switches the apoptotic response to proliferation. Indeed, we demonstrate that the absence or presence of cell-cell contacts dictates the cell response to CD95. Cell contacts increase global levels of phosphorylated tyrosines, including CD95’s tyrosine. A tyrosine-to-alanine CD95 mutant blocks proliferation in cells in contact. Our study sheds light into the regulatory mechanism of CD95 activation that can be further explored for anti-cancer therapies. : Gülcüler Balta et al. show that CD95 receptor activation is determined through the presentation of its ligand at a certain intermolecular distance. The type of signaling triggered by CD95 is, however, decided by the cellular environment. CD95 triggers survival in cancer cells in contact with other cells and death in isolated ones. Keywords: CD95, CD95 ligand, death receptors, apoptosis, survival, cell-cell contact, cancer, tyrosine kinase, supported membrane
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- 2019
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8. Multiparametric image analysis reveals role of Caveolin1 in endosomal progression rather than internalization of EGFR
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Hannah Schmidt-Glenewinkel, Joël Beaudouin, Roland Eils, Eileen Reinz, Stefan Legewie, Svetlana Bulashevska, and Angel Alonso
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Caveolin ,Endosome ,media_common.quotation_subject ,medicine.medical_treatment ,EGFR ,Caveolin 1 ,Biophysics ,Down-Regulation ,Endosomes ,Biology ,Endocytosis ,Biochemistry ,law.invention ,Flow cytometry ,Structural Biology ,Confocal microscopy ,law ,Epidermal growth factor ,Genetics ,medicine ,Humans ,Internalization ,Molecular Biology ,media_common ,EGF ,Epidermal Growth Factor ,medicine.diagnostic_test ,Growth factor ,rab7 GTP-Binding Proteins ,Cell Biology ,Cell biology ,ErbB Receptors ,Multiparametric image analysis ,rab GTP-Binding Proteins ,Caveolae-mediated endocytosis ,HeLa Cells - Abstract
Endosomes constitute a central layer in the regulation of growth factor signaling. We applied flow cytometry, confocal microscopy and automated image quantification to define the role of Caveolin1 (Cav1) in epidermal growth factor (EGF) receptor (i) internalization and (ii) endosomal trafficking. Antisense-downregulation of Cav1 did not affect internalization of EGF:EGFR-complexes from the plasma membrane. Instead, Cav1-knockdown had a profound effect on endosomal trafficking and caused a shift in EGF vesicle distribution towards Rab7-negative compartments at late timepoints. Moreover, image quantification with single-endosome resolution revealed that EGF:Cav1-complexes undergo a maturation pattern reminiscent of late endosomes. Our data suggest a model in which Caveolin1 acts upon EGF endosomes internalized via the Clathrin-pathway and functions at the transition from early to late endosomes.
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9. Dynamics within the CD95 death‐inducing signaling complex decide life and death of cells
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Leo Neumann, Carina Pforr, Joel Beaudouin, Alexander Pappa, Nicolai Fricker, Peter H Krammer, Inna N Lavrik, and Roland Eils
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apoptosis ,CD95 signaling ,DISC ,model reduction ,NF‐κB ,Biology (General) ,QH301-705.5 ,Medicine (General) ,R5-920 - Abstract
Abstract This study explores the dilemma in cellular signaling that triggering of CD95 (Fas/APO‐1) in some situations results in cell death and in others leads to the activation of NF‐κB. We established an integrated kinetic mathematical model for CD95‐mediated apoptotic and NF‐κB signaling. Systematic model reduction resulted in a surprisingly simple model well approximating experimentally observed dynamics. The model postulates a new link between c‐FLIPL cleavage in the death‐inducing signaling complex (DISC) and the NF‐κB pathway. We validated experimentally that CD95 stimulation resulted in an interaction of p43‐FLIP with the IKK complex followed by its activation. Furthermore, we showed that the apoptotic and NF‐κB pathways diverge already at the DISC. Model and experimental analysis of DISC formation showed that a subtle balance of c‐FLIPL and procaspase‐8 determines life/death decisions in a nonlinear manner. We present an integrated model describing the complex dynamics of CD95‐mediated apoptosis and NF‐κB signaling.
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- 2010
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