28 results on '"Jan Vydra"'
Search Results
2. Several factors that predict the outcome of large B‐cell lymphoma patients who relapse/progress after chimeric antigen receptor (CAR) T‐cell therapy can be identified before cell administration
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Alice Sýkorová, František Folber, Kamila Polgárová, Heidi Móciková, Juraj Ďuraš, Kateřina Steinerová, Aleš Obr, Adriana Heindorfer, Miriam Ladická, Ľubica Lukáčová, Erika Čellárová, Ivana Plameňová, David Belada, Andrea Janíková, Marek Trněný, Tereza Jančárková, Vít Procházka, Andrej Vranovský, Margaréta Králiková, Jan Vydra, Lukáš Smolej, Ľuboš Drgoňa, Martin Sedmina, Eva Čermáková, and Robert Pytlík
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CAR T‐cell failure ,outcomes of patients after CAR T‐cell therapy failure ,relapsed/refractory large B‐cell lymphoma ,risk factors for CAR T‐cell therapy failure ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Aim The aim of this study was to analyse the outcomes of patients with large B‐cell lymphoma (LBCL) treated with chimeric antigen receptor T‐cell therapy (CAR‐Tx), with a focus on outcomes after CAR T‐cell failure, and to define the risk factors for rapid progression and further treatment. Methods We analysed 107 patients with LBCL from the Czech Republic and Slovakia who were treated in ≥3rd‐line with tisagenlecleucel or axicabtagene ciloleucel between 2019 and 2022. Results The overall response rate (ORR) was 60%, with a 50% complete response (CR) rate. The median progression‐free survival (PFS) and overall survival (OS) were 4.3 and 26.4 months, respectively. Sixty‐three patients (59%) were refractory or relapsed after CAR‐Tx. Of these patients, 39 received radiotherapy or systemic therapy, with an ORR of 22% (CR 8%). The median follow‐up of surviving patients in whom treatment failed was 10.6 months. Several factors predicting further treatment administration and outcomes were present even before CAR‐Tx. Risk factors for not receiving further therapy after CAR‐Tx failure were high lactate dehydrogenase (LDH) levels before apheresis, extranodal involvement (EN), high ferritin levels before lymphodepletion (LD) and ECOG PS >1 at R/P. The median OS‐2 (from R/P after CAR‐Tx) was 6.7 months (6‐month 57.9%) for treated patients and 0.4 months (6‐month 4.2%) for untreated patients (p limit of the normal range (LNR) before LD, albumin < LNR and ECOG PS > 1 at R/P. All these factors, together with LDH > LNR before LD and EN involvement at R/P, predicted OS‐2 for treated patients. Conclusion Our findings allow better stratification of CAR‐Tx candidates and stress the need for a proactive approach (earlier restaging, intervention after partial remission achievement).
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- 2024
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3. Good manufacturing practice-grade generation of CD19 and CD123-specific CAR-T cells using piggyBac transposon and allogeneic feeder cells in patients diagnosed with B-cell non-Hodgkin lymphoma and acute myeloid leukemia
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Martin Mucha, Martin Štach, Iva Kaštánková, Jana Rychlá, Jan Vydra, Petr Lesný, and Pavel Otáhal
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CAR-T cells ,leukemia ,lymphoma ,electroporation ,PiggyBac PB transposon ,Immunologic diseases. Allergy ,RC581-607 - Abstract
BackgroundThe non-viral production of CAR-T cells through electroporation of transposon DNA plasmids is an alternative approach to lentiviral/retroviral methods. This method is particularly suitable for early-phase clinical trials involving novel types of CAR-T cells. The primary disadvantage of non-viral methods is the lower production efficiency compared to viral-based methods, which becomes a limiting factor for CAR-T production, especially in chemotherapy-pretreated lymphopenic patients.MethodsWe describe a good manufacturing practice (GMP)-compliant protocol for producing CD19 and CD123-specific CAR-T cells based on the electroporation of transposon vectors. The lymphocytes were purified from the blood of patients undergoing chemotherapy for B-NHL or AML and were electroporated with piggyBac transposon encoding CAR19 or CAR123, respectively. Electroporated cells were then polyclonally activated by anti-CD3/CD28 antibodies and a combination of cytokines (IL-4, IL-7, IL-21). The expansion was carried out in the presence of irradiated allogeneic blood-derived mononuclear cells (i.e., the feeder) for up to 21 days.ResultsExpansion in the presence of the feeder enhanced CAR-T production yield (4.5-fold in CAR19 and 9.3-fold in CAR123). Detailed flow-cytometric analysis revealed the persistence of early-memory CAR-T cells and a low vector-copy number after production in the presence of the feeder, with no negative impact on the cytotoxicity of feeder-produced CAR19 and CAR123 T cells. Furthermore, large-scale manufacturing of CAR19 carried out under GMP conditions using PBMCs obtained from B-NHL patients (starting number=200x10e6 cells) enabled the production of >50x10e6 CAR19 in 7 out of 8 cases in the presence of the feeder while only in 2 out of 8 cases without the feeder.ConclusionsThe described approach enables GMP-compatible production of sufficient numbers of CAR19 and CAR123 T cells for clinical application and provides the basis for non-viral manufacturing of novel experimental CAR-T cells that can be tested in early-phase clinical trials. This manufacturing approach can complement and advance novel experimental immunotherapeutic strategies against human hematologic malignancies.
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- 2024
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4. MethScore as a new comprehensive DNA methylation-based value refining the prognosis in acute myeloid leukemia
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Šárka Šestáková, Cyril Šálek, Dávid Kundrát, Ela Cerovská, Jan Vydra, Ivana Ježíšková, Adam Folta, Jiří Mayer, Petr Cetkovský, and Hana Remešová
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Acute myeloid leukemia ,DNA methylation ,NGS ,Prognosis ,Medicine ,Genetics ,QH426-470 - Abstract
Abstract Background Changes in DNA methylation are common events in the pathogenesis of acute myeloid leukemia (AML) and have been repeatedly reported as associated with prognosis. However, studies integrating these numerous and potentially prognostically relevant DNA methylation changes are lacking. Therefore, we aimed for an overall evaluation of these epigenetic aberrations to provide a comprehensive NGS-based approach of DNA methylation assessment for AML prognostication. Results We designed a sequencing panel targeting 239 regions (approx. 573 kb of total size) described in the literature as having a prognostic impact or being associated with AML pathogenesis. Diagnostic whole-blood DNA samples of adult AML patients divided into a training (n = 128) and a testing cohort (n = 50) were examined. The libraries were prepared using SeqCap Epi Enrichments System (Roche) and sequenced on MiSeq instrument (Illumina). Altogether, 1935 CpGs affecting the survival (p
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- 2024
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5. Donor KIR genotype based outcome prediction after allogeneic stem cell transplantation: no land in sight
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Johannes Schetelig, Henning Baldauf, Falk Heidenreich, Jorinde D. Hoogenboom, Stephen R. Spellman, Alexander Kulagin, Thomas Schroeder, Henrik Sengeloev, Peter Dreger, Edouard Forcade, Jan Vydra, Eva Maria Wagner-Drouet, Goda Choi, Shankara Paneesha, Nuno A. A. Miranda, Alina Tanase, Liesbeth C. de Wreede, Vinzenz Lange, Alexander H. Schmidt, Jürgen Sauter, Joshua A. Fein, Yung-Tsi Bolon, Meilun He, Steven G. E. Marsh, Shahinaz M. Gadalla, Sophie Paczesny, Annalisa Ruggeri, Christian Chabannon, and Katharina Fleischhauer
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killer-cell immunoglobulin-like receptor (KIR) ,allogeneic hematopoietic cell transplantation (alloHCT) ,risk of relapse ,donor selection ,prediction model ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Optimizing natural killer (NK) cell alloreactivity could further improve outcome after allogeneic hematopoietic cell transplantation (alloHCT). The donor’s Killer-cell Immunoglobulin-like Receptor (KIR) genotype may provide important information in this regard. In the past decade, different models have been proposed aiming at maximizing NK cell activation by activating KIR-ligand interactions or minimizing inhibitory KIR-ligand interactions. Alternative classifications intended predicting outcome after alloHCT by donor KIR-haplotypes. In the present study, we aimed at validating proposed models and exploring more classification approaches. To this end, we analyzed samples stored at the Collaborative Biobank from HLA-compatible unrelated stem cell donors who had donated for patients with acute myeloid leukemia (AML) or myelodysplastic neoplasm (MDS) and whose outcome data had been reported to EBMT or CIBMTR. The donor KIR genotype was determined by high resolution amplicon-based next generation sequencing. We analyzed data from 5,017 transplants. The median patient age at alloHCT was 56 years. Patients were transplanted for AML between 2013 and 2018. Donor-recipient pairs were matched for HLA-A, -B, -C, -DRB1, and -DQB1 (79%) or had single HLA mismatches. Myeloablative conditioning was given to 56% of patients. Fifty-two percent of patients received anti-thymocyte-globulin-based graft-versus-host disease prophylaxis, 32% calcineurin-inhibitor-based prophylaxis, and 7% post-transplant cyclophosphamide-based prophylaxis. We tested several previously reported classifications in multivariable regression analyses but could not confirm outcome associations. Exploratory analyses in 1,939 patients (39%) who were transplanted from donors with homozygous centromeric (cen) or telomeric (tel) A or B motifs, showed that the donor cen B/B-tel A/A diplotype was associated with a trend to better event-free survival (HR 0.84, p=.08) and reduced risk of non-relapse mortality (NRM) (HR 0.65, p=.01). When we further dissected the contribution of B subtypes, we found that only the cen B01/B01-telA/A diplotype was associated with a reduced risk of relapse (HR 0.40, p=.04) while all subtype combinations contributed to a reduced risk of NRM. This exploratory finding has to be validated in an independent data set. In summary, the existing body of evidence is not (yet) consistent enough to recommend use of donor KIR genotype information for donor selection in routine clinical practice.
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- 2024
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6. GVHD occurrence does not reduce AML relapse following PTCy-based haploidentical transplantation: a study from the ALWP of the EBMT
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Frédéric Baron, Myriam Labopin, Johanna Tischer, Anna Maria Raiola, Jan Vydra, Didier Blaise, Patrizia Chiusolo, Friedrich Stölzel, Renato Fanin, Patrice Chevallier, Arnon Nagler, Fabio Ciceri, and Mohamad Mohty
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AML ,Acute myeloid leukemia ,HLA-haploidentical ,Mismatched unrelated donor ,Post-transplant cyclophosphamide ,PTCy ,Diseases of the blood and blood-forming organs ,RC633-647.5 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract The association between graft-versus-host disease (GVHD) occurrence and acute myeloid leukemia (AML) relapse in patients treated with HLA-haploidentical allogeneic hematopoietic stem cell transplantation (Haplo-HCT) with post-transplant cyclophosphamide (PTCy)-based GVHD prophylaxis has remained debated. Here, we addressed this issue in patients with active AML at transplantation. 2-year cumulative incidences of relapse and leukemia-free survival (LFS) were 49% and 32.3%, respectively. There were no associations between acute nor chronic GVHD of any grade and lower relapse incidence. However, grade I acute GVHD was associated with better LFS (HR = 0.71, 95% CI 0.51–0.99, P = 0.04). In contrast, grade III–IV acute (HR = 3.09, 95% CI 1.87–5.12, P
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- 2023
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7. Significance of Degree of HLA Disparity Using T-cell Replete Peripheral Blood Stem Cells From Haploidentical Donors With Posttransplantation Cyclophosphamide in AML in First Complete Hematologic Remission: A Study of the Acute Leukemia Working Party of the EBMT
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Mohamed A. Kharfan-Dabaja, Myriam Labopin, Ernesto Ayala, Ali Bazarbachi, Didier Blaise, Jan Vydra, Stefania Bramanti, Maija Itälä-Remes, Christoph Schmid, Alessandro Busca, Edouard Forcade, Werner Rabitsch, Marco Zecca, Nicolaus Kröger, Claude-Eric Bulabois, Giovanni Grillo, Alessandro Rambaldi, Renato Fanin, Francesco Zallio, Nicola Di Renzo, Yener Koc, Yana Novis, Andrew McDonald, Concepcion Herrera Arroyo, Jaime Sanz, Arnon Nagler, Fabio Ciceri, and Mohamad Mohty
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Abstract
Availability of haploidentical donors has broadened utilization of allogeneic hematopoietic cell transplantation (allo-HCT). Peripheral blood stem cells (PBSC) are being used with increased frequency in haploidentical allo-HCT. We evaluated extent of HLA disparity (2–3/8 versus 4/8 HLA antigen mismatches) on post-allograft outcomes when using T-cell replete PBSC from haploidentical donors for acute myeloid leukemia in first complete remission. Primary objectives entailed assessing cumulative incidence of grade 2–4 acute graft-versus-host disease (GVHD) and chronic GVHD (any grade). A total of 645 patients received a haploidentical allo-HCT from a donor with either 2–3 of 8 HLA antigen mismatches (n = 180) or with 4 of 8 HLA antigen mismatches (n = 465). Presence of 2–3 of 8 versus 4 of 8 HLA mismatches did not affect the incidence of acute GVHD (grade 2–4) and chronic GVHD (any grade). Overall survival (OS), leukemia-free survival (LFS) relapse incidence (RI), nonrelapse mortality and the composite endpoint of GVHD-free relapse-free survival were also similar among the groups. Pertaining to HLA-B leader matching effect, our analysis did not discern any difference in aforementioned post-allograft outcomes for this variable. However, in univariate analysis, absence of an antigen mismatch in HLA-DPB1 showed a trend for better OS. Notwithstanding inherent limitations associated with registry data, our results did not show an advantage of selecting a haploidentical donor with 2–3 of 8 HLA antigen mismatches over one with 4 of 8 HLA antigen mismatches when using PBSC as the cell source. Adverse cytogenetics remains a major adverse determinant of inferior OS and LFS and a higher RI. Using reduced-intensity conditioning yielded worse OS and LFS.
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- 2023
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8. Non-Mutated Nucleophosmin 1 Is Recognized by the CD8+ T Lymphocytes of an AML Patient after the Transplantation of Hematopoietic Stem Cells from an HLA-Haploidentical Donor
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Sarka Nemeckova, Kamila Alexova-Zurkova, Petr Hainz, Jitka Krystofova, Jana Mackova, Katerina Roubalova, Marketa Stastna-Markova, Milena Vrana, and Jan Vydra
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acute myeloid leukemia ,T cell response ,nucleophosmin 1 ,mutation ,hematopoietic stem cell transplantation ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Nucleophosmin (NPM1, B23) is a multifunctional phosphoprotein expressed in all tissues. The protein is mainly localized in nucleoli. In hematological malignancies, NPM1 belongs to commonly altered genes. Its mutation, always heterozygous, leads to the re-localization of the NPM1 protein from the nucleolus to the cytoplasm (NPM1c+). NPM1c+ is found in 30% of acute myeloid leukemia (AML). Our study showed that an AML patient, whose leukemia cells carried the NPM1c+ mutation and who was the recipient of allogeneic HSCT from a haploidentical donor, raised a robust allorestricted CD8+ T cell response directed against the NPM1wt protein. Favourably, the response against NPM1wt was not accompanied by side effects such as GvHD. Moreover, the induction of a high NPM1wt-specific response coincided with the decrease in NPM1c+ transcripts detected, implying a beneficial graft versus leukemia effect. On the basis of these results, we suppose that TCRs from allorestricted NPM1wt-specific T cells are worth studying in other recipients of grafts from haploidentical donors as a possible tool for TCR gene therapy.
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- 2022
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9. Characterization of the input material quality for the production of tisagenlecleucel by multiparameter flow cytometry and its relation to the clinical outcome
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Martin Štach, Robert Pytlík, Kristýna Šmilauerová, Jana Rychlá, Martin Mucha, Jan Musil, Abhishek Koladiya, Matěj Nemec, Martina Petráčková, Iva Kaštánková, Pavla Pecherková, Lucie Šrámková, Kamila Polgárová, Marek Trněný, Petr Lesný, Jan Vydra, and Pavel Otáhal
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immunotherapy ,CAR-T cells ,tisagenlecleucel ,B-cell lymphoma and leukemia ,Kymriah ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 ,Pathology ,RB1-214 - Abstract
Tisagenlecleucel (tisa-cel) is a CD19-specific CAR-T cell product approved for the treatment of relapsed/refractory (r/r) DLBCL or B-ALL. We have followed a group of patients diagnosed with childhood B-ALL (n = 5), adult B-ALL (n = 2), and DLBCL (n = 25) who were treated with tisa-cel under non-clinical trial conditions. The goal was to determine how the intensive pretreatment of patients affects the produced CAR-T cells, their in vivo expansion, and the outcome of the therapy. Multiparametric flow cytometry was used to analyze the material used for manufacturing CAR-T cells (apheresis), the CAR-T cell product itself, and blood samples obtained at three timepoints after administration. We present the analysis of memory phenotype of CD4/CD8 CAR-T lymphocytes (CD45RA, CD62L, CD27, CD28) and the expression of inhibitory receptors (PD-1, TIGIT). In addition, we show its relation to the patients’ clinical characteristics, such as tumor burden and sensitivity to prior therapies. Patients who responded to therapy had a higher percentage of CD8+CD45RA+CD27+ T cells in the apheresis, although not in the produced CAR-Ts. Patients with primary refractory aggressive B-cell lymphomas had the poorest outcomes which was characterized by undetectable CAR-T cell expansion in vivo. No clear correlation of the outcome with the immunophenotypes of CAR-Ts was observed. Our results suggest that an important parameter predicting therapy efficacy is CAR-Ts’ level of expansion in vivo but not the immunophenotype. After CAR-T cells’ administration, measurements at several timepoints accurately detect their proliferation intensity in vivo. The outcome of CAR-T cell therapy largely depends on biological characteristics of the tumors rather than on the immunophenotype of produced CAR-Ts.
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- 2023
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10. Prediction of Nonrelapse Mortality in Patients With Acute Myeloid Leukemia and Acute Lymphoblastic Leukemia Receiving Allogeneic Stem Cell Transplantation With Posttransplantation Cyclophosphamide-based Graft Versus Host Disease Prophylaxis
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Sjoerd J. F. Hermans, Jurjen Versluis, Myriam Labopin, Sebastian Giebel, Yvette van Norden, Ivan Moiseev, Didier Blaise, Jose L. Díez Martín, Ellen Meijer, Montserrat Rovira, Goda Choi, Anna Maria Raiola, Yener Koc, Péter Reményi, Jan Vydra, Nicolaus Kröger, Simona Sica, Massimo Martino, Gwendolyn van Gorkom, Patrice Chevallier, Alessandro Busca, Concepcion Herrera Arroyo, Eolia Brissot, Zinaida Peric, Arnon Nagler, Roni Shouval, Fabio Ciceri, Jan J. Cornelissen, and Mohamad Mohty
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Diseases of the blood and blood-forming organs ,RC633-647.5 - Abstract
Graft versus host disease (GVHD) prophylaxis with posttransplantation cyclophosphamide (PTCY) has been established to reduce severe GVHD, and thereby potentially reducing nonrelapse mortality (NRM) after allogeneic stem cell transplantation (alloSCT). We evaluated the predictive capacity of established NRM-risk scores in patients receiving PTCY-based GVHD prophylaxis, and subsequently developed and validated a novel PTCY-specific NRM-risk model. Adult patients (n = 1861) with AML or ALL in first complete remission who received alloSCT with PTCY-based GVHD prophylaxis were included. The PTCY-risk score was developed using multivariable Fine and Gray regression, selecting parameters from the hematopoietic cell transplantation-comorbidity index (HCT-CI) and European Group for Blood and Marrow Transplantation (EBMT) score with a subdistribution hazard ratio (SHR) of ≥1.2 for 2-year NRM in the training set (70% split), which was validated in the test set (30%). The performance of the EBMT score, HCT-CI, and integrated EBMT score was relatively poor for discriminating 2-year NRM (c-statistic 51.7%, 56.6%, and 59.2%, respectively). The PTCY-risk score included 10 variables which were collapsed in 3 risk groups estimating 2-year NRM of 11% ± 2%, 19% ± 2%, and 36% ± 3% (training set, c-statistic 64%), and 11% ± 2%, 18% ± 3%, and 31% ± 5% (test set, c-statistic 63%), which also translated into different overall survival. Collectively, we developed an NRM-risk score for acute leukemia patients receiving PTCY that better predicted 2-year NRM compared with existing models, which might be applicable to the specific toxicities of high-dose cyclophosphamide.
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- 2023
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11. Pretransplant BK Virus-Specific T-Cell-Mediated Immunity and Serotype Specific Antibodies May Have Utility in Identifying Patients at Risk of BK Virus-Associated Haemorrhagic Cystitis after Allogeneic HSCT
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Markéta Šťastná-Marková, Eva Hamšíková, Petr Hainz, Petr Hubáček, Marie Kroutilová, Jitka Kryštofová, Viera Ludvíková, Jan Musil, Pavla Pecherková, Martina Saláková, Vojtěch Šroller, Jan Vydra, and Šárka Němečková
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human BK polyomavirus 1 and 4 (BKPyV 1 and 4) ,haemorrhagic cystitis ,anti/BKPyV IgG ,T-cell response ,VP1 ,LTag ,Medicine - Abstract
BK polyomavirus (BKPyV) persists lifelong in renal and urothelial cells with asymptomatic urinary shedding in healthy individuals. In some immunocompromised persons after transplantation of hematopoietic stem cells (HSCT), the BKPyV high-rate replication is associated with haemorrhagic cystitis (HC). We tested whether the status of BKPyV immunity prior to HSCT could provide evidence for the BKPyV tendency to reactivate. We have shown that measurement of pretransplant anti-BKPyV 1 and 4 IgG levels can be used to evaluate the HC risk. Patients with anti-BKPyV IgG in the range of the 1st–2nd quartile of positive values and with positive clinical risk markers have a significantly increased HC risk, in comparison to the reference group of patients with “non-reactive” anti-BKPyV IgG levels and with low clinical risk (LCR) (p = 0.0009). The predictive value of pretransplant BKPyV-specific IgG was confirmed by determination of genotypes of the shed virus. A positive predictive value was also found for pretransplant T-cell immunity to the BKPyV antigen VP1 because the magnitude of IFN-γ T-cell response inversely correlated with posttransplant DNAuria and with HC. Our novel data suggest that specific T-cells control BKPyV latency before HSCT, and in this way may influence BKPyV reactivation after HSCT. Our study has shown that prediction using a combination of clinical and immunological pretransplant risk factors can help early identification of HSCT recipients at high risk of BKPyV disease.
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- 2021
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12. Impact of measurable residual disease on outcomes of unrelated donor haematopoietic cell transplantation with post-transplant cyclophosphamide in AML in first complete remission
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Arnon Nagler, Myriam Labopin, Bhagirathbhai Dholaria, Didier Blaise, Sergey Bondarenko, Jan Vydra, Goda Choi, Montserrat Rovira, Péter Reményi, Ellen Meijer, Claude Eric Bulabois, J. L. Diez‐Martin, Ibrahim Yakoub‐Agha, Eolia Brissot, Alexandros Spyridonidis, Jaime Sanz, Amit Patel, Mutlu Arat, Ali Bazarbachi, Gesine Bug, Bipin N. Savani, Sebastian Giebel, Fabio Ciceri, Mohamad Mohty, Hematology, AII - Inflammatory diseases, CCA - Cancer Treatment and quality of life, and CCA - Imaging and biomarkers
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measurable residual disease ,allogeneic haematopoietic cell transplantation ,post-transplant cyclophosphamide ,unrelated donor ,acute myeloid leukaemia ,Hematology - Abstract
Pre-transplant measurable residual disease (MRD) predicts relapse and outcome of allogeneic haematopoietic cell transplantation (allo-HCT). The impact of MRD on the outcomes of post-transplant cyclophosphamide (PTCy)-based allo-HCT from a matched unrelated donor (UD) is unknown. This study assessed the impact of MRD in acute myeloid leukaemia (AML) in the first complete remission (CR1). A total of 272 patients (MRD negative [MRD−], n = 165; MRD positive [MRD+], n = 107) with a median follow-up of 19 (range: 16–24) months were studied. The incidence of grades II–IV and grades III–IV acute GVHD at day 180 was 25.2% and 25% (p = 0.99), and 10.6% and 6.8% (p = 0.29), respectively, and 2-year chronic GVHD was 35% and 30.4% (p = 0.96) in MRD+ and MRD− cohorts, respectively. In multivariate analysis, MRD+ status was associated with a higher incidence of relapse (RI) (hazard ratio [HR] = 2.56, 95% CI: 1.39–4.72), lower leukaemia-free survival (LFS) (HR = 2.04, 95% CI: 1.23–3.39), overall survival (OS) (HR = 1.83, 95% CI: 1.04–3.25) and GVHD-free, relapse-free survival (GRFS) (HR = 1.69, 95% CI: 1.10–2.58). MRD status did not have a significant impact on non-relapse mortality (NRM), or acute or chronic GVHD risk. Among patients with AML undergoing UD allo-HCT with PTCy, pre-transplant MRD+ status predicted a higher relapse rate, lower LFS, OS and GRFS.
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- 2023
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13. A Phase I Trial of Allogeneic γδ T Lymphocytes From Haploidentical Donors in Patients With Refractory or Relapsed Acute Myeloid Leukemia
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Jan Vydra, Emilio Cosimo, Petr Lesný, Richard Sebastian Wanless, John Anderson, Alan George Clark, Angela Scott, Emma Kate Nicholson, and Michael Leek
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Cancer Research ,Oncology ,Hematology - Published
- 2023
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14. Specific immune response to mRNA vaccines against COVID-19 in patients receiving allogeneic stem cell transplantation for myeloid malignancy was altered by immunosuppressive therapy
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Jana Macková, Petr Hainz, Jitka Kryštofová, Kateřina Roubalová, Markéta Šťastná-Marková, Šárka Vaníková, Jan Musil, Jan Vydra, and Šárka Němečková
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Cancer Research ,Oncology ,Hematology - Published
- 2023
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15. Human leukocyte antigen-haploidentical transplantation for relapsed/refractory acute myeloid leukemia: Better leukemia-free survival with bone marrow than with peripheral blood stem cells in patients ≥55 years of age
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Frédéric Baron, Myriam Labopin, Johanna Tischer, Fabio Ciceri, Anna Maria Raiola, Didier Blaise, Simona Sica, Jan Vydra, Renato Fanin, Friedrich Stölzel, Alessandro Busca, Jose Luis Diez‐Martin, Yener Koc, Arnon Nagler, Mohamad Mohty, Université de Liège, CHU Saint-Antoine [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU), Ludwig Maximilian University [Munich] (LMU), San Raffaele Scientific Institute, Vita-Salute San Raffaele University and Center for Translational Genomics and Bioinformatics, Service d’Hématologie [Institut Paoli Calmettes, Marseille], Institut Paoli-Calmettes, Fédération nationale des Centres de lutte contre le Cancer (FNCLCC)-Fédération nationale des Centres de lutte contre le Cancer (FNCLCC), Fondazione Policlinico Universitario Agostino Gemelli IRCCS, Università cattolica del Sacro Cuore = Catholic University of the Sacred Heart [Roma] (Unicatt), Università degli Studi di Udine - University of Udine [Italie], University Hospital Carl Gustav Carus [Dresden, Germany], Technische Universität Dresden = Dresden University of Technology (TU Dresden), Città della Salute e della Scienza University-Hospital, Medicana International [Istanbul, Turkey], Chaim Sheba Medical Center, Centre de Recherche Saint-Antoine (CRSA), and Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)
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Adult ,Peripheral Blood Stem Cell Transplantation ,Transplantation Conditioning ,[SDV]Life Sciences [q-bio] ,Hematopoietic Stem Cell Transplantation ,Graft vs Host Disease ,Hematology ,Leukemia, Myeloid, Acute ,Bone Marrow ,HLA Antigens ,Recurrence ,Transplantation, Haploidentical ,Peripheral Blood Stem Cells ,Humans ,Cyclophosphamide ,Bone Marrow Transplantation ,Retrospective Studies - Abstract
The best stem cell source for T-cell replete human leukocyte antigen (HLA)-haploidentical transplantation with post-transplant cyclophosphamide (PTCy) remains to be determined. In this European Society for Blood and Marrow Transplantation retrospective study, we analyzed the impact of stem cell source on leukemia-free survival (LFS) in adult patients with primary refractory or relapsed acute myeloid leukemia (AML) given grafts from HLA-haploidentical donors with PTCy as graft-versus-host disease (GVHD) prophylaxis. A total of 668 patients (249 bone marrow [BM] and 419 peripheral blood stem cells [PBSC] recipients) met the inclusion criteria. The use of PBSC was associated with a higher incidence of grade II-IV (HR = 1.59, p = .029) and grade III-IV (HR = 2.08, p = .013) acute GVHD. There was a statistical interaction between patient age and the impact of stem cell source for LFS (p < .01). In multivariate Cox models, among patients = 55 years of age, the use of PBSC versus BM was associated with higher non-relapse mortality (NRM) (HR = 1.7, p = .01), lower LFS (HR = 1.37, p = .026) and lower overall survival (HR = 1.33, p = .044). In conclusions, our data suggest that in patients >= 55 years of age with active AML at HLA-haploidentical transplantation, the use of BM instead of PBSC as stem cell source results in lower NRM and better LFS. In contrast among younger patients, the use of PBSC results in at least a comparable LFS.
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- 2022
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16. Should anti-thymocyte globulin be added in post-transplant cyclophosphamide based matched unrelated donor peripheral blood stem cell transplantation for acute myeloid leukemia? A study on behalf of the Acute Leukemia Working Party of the EBMT
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Alexandros Spyridonidis, Myriam Labopin, Eolia Brissot, Ivan Moiseev, Jan Cornelissen, Goda Choi, Fabio Ciceri, Jan Vydra, Péter Reményi, Montserrat Rovira, Ellen Meijer, Hélène Labussière-Wallet, Didier Blaise, Gwendolyn van Gorkom, Nicolaus Kröger, Yener Koc, Sebastian Giebel, Ali Bazarbachi, Bipin Savani, Arnon Nagler, Mohamad Mohty, Hematology, Interne Geneeskunde, MUMC+: MA Hematologie (9), RS: GROW - R3 - Innovative Cancer Diagnostics & Therapy, General University Hospital of Patras, CHU Saint-Antoine [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU), Centre de Recherche Saint-Antoine (CRSA), Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU), Erasmus University Medical Center [Rotterdam] (Erasmus MC), University of Groningen [Groningen], San Raffaele Scientific Institute, Vita-Salute San Raffaele University and Center for Translational Genomics and Bioinformatics, Hospital Clínic de Barcelona [Catalonia, Spain], VU University Medical Center [Amsterdam], Hospices Civils de Lyon (HCL), Service d’Hématologie [Institut Paoli Calmettes, Marseille], Institut Paoli-Calmettes, Fédération nationale des Centres de lutte contre le Cancer (FNCLCC)-Fédération nationale des Centres de lutte contre le Cancer (FNCLCC), Centre de Recherche en Cancérologie de Marseille (CRCM), Aix Marseille Université (AMU)-Institut Paoli-Calmettes, Fédération nationale des Centres de lutte contre le Cancer (FNCLCC)-Fédération nationale des Centres de lutte contre le Cancer (FNCLCC)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), University Hospital Hamburg-Eppendorf, Universitaetsklinikum Hamburg-Eppendorf = University Medical Center Hamburg-Eppendorf [Hamburg] (UKE), Medicana International [Istanbul, Turkey], Maria Sklodowska-Curie Memorial Cancer Center and Institute of Oncology (MCMCC), American University of Beirut [Beyrouth] (AUB), Vanderbilt University Medical Center [Nashville], Vanderbilt University [Nashville], Chaim Sheba Medical Center, and CCA - Cancer Treatment and quality of life
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Transplantation ,Peripheral Blood Stem Cell Transplantation ,PHASE-3 ,IMPACT ,[SDV]Life Sciences [q-bio] ,BONE-MARROW ,MULTICENTER ,Hematopoietic Stem Cell Transplantation ,Graft vs Host Disease ,Hematology ,HEMATOLOGICAL MALIGNANCIES ,OPEN-LABEL ,PREVENTION ,PROPHYLAXIS ,Leukemia, Myeloid, Acute ,Recurrence ,VERSUS-HOST-DISEASE ,Humans ,DEPLETION ,Unrelated Donors ,Cyclophosphamide ,Antilymphocyte Serum ,Retrospective Studies - Abstract
Background: Post-transplant cyclophosphamide (PTCY) is increasingly used for allogeneic peripheral blood stem cell transplantation (allo-PBSCT) from an HLA-matched unrelated donor (MUD) as an alternative to the standard anti-thymocyte globulin (ATG) graft-versus-host disease (GvHD) prophylaxis. Following the demonstration that the use of PBSC haploidentical grafts results in more GvHD than bone marrow grafts, groups have attempted to reduce GvHD in haploidentical-PBSCT by adding ATG to PTCY. The experience of combined PTCY+ATG in the MUD allo-PBSCT is minimal and whether ATG brings any added value when PTCY is used in this setting is still unclear. Methods: In this registry-based study, we compared outcomes of 421 patients with PTCY and 151 patients with PTCY+ATG who underwent a first MUD allo-PBSCT for acute myeloid leukemia (AML) in complete remission. Results: Characteristics of PTCY and PTCY+ATG patients were well balanced, including the number of additional immunosuppressive drugs, with the only significant difference between the two cohorts being the median year of transplant, and the follow-up period (19.6 versus 31.1 months, respectively, pConclusions: To date, the question of the best combination of GvHD-preventing drugs in the MUD-PBSCT setting remains unanswered. Our results highlight that in PTCY-based MUD-PBSCT for AML, the addition of ATG does not provide any extra benefit in terms of further GvHD reduction, better GRFS or better survival.
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- 2022
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17. Comparison of HLA-mismatched unrelated donor transplantation with post-transplant cyclophosphamide versus HLA-haploidentical transplantation in patients with active acute myeloid leukemia
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Frédéric Baron, Myriam Labopin, Johanna Tischer, Fabio Ciceri, Anna Maria Raiola, Didier Blaise, Simona Sica, Jan Vydra, Renato Fanin, Jose Luis Diez-Martin, Claude Eric Bulabois, Friedrich Stölzel, Alessandro Busca, Pavel Jindra, Yener Koc, Patrice Chevallier, Edouard Forcade, Wolf Rösler, Jakob Passweg, Alexander Kulagin, Angelo Michele Carella, Celestine Simand, Ali Bazarbachi, Pietro Pioltelli, Arnon Nagler, Mohamad Mohty, Université de Liège, CHU Saint-Antoine [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU), Ludwig Maximilian University [Munich] (LMU), San Raffaele Scientific Institute, Vita-Salute San Raffaele University and Center for Translational Genomics and Bioinformatics, Service d’Hématologie [Institut Paoli Calmettes, Marseille], Institut Paoli-Calmettes, Fédération nationale des Centres de lutte contre le Cancer (FNCLCC)-Fédération nationale des Centres de lutte contre le Cancer (FNCLCC), Centre de Recherche en Cancérologie de Marseille (CRCM), Aix Marseille Université (AMU)-Institut Paoli-Calmettes, Fédération nationale des Centres de lutte contre le Cancer (FNCLCC)-Fédération nationale des Centres de lutte contre le Cancer (FNCLCC)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Fondazione Policlinico Universitario Agostino Gemelli IRCCS, Università cattolica del Sacro Cuore = Catholic University of the Sacred Heart [Roma] (Unicatt), Università degli Studi di Udine - University of Udine [Italie], Hospital Gregorio Marañon, Hospital Gregorio Marañón, Centre Hospitalier Universitaire [Grenoble] (CHU), University Hospital Carl Gustav Carus [Dresden, Germany], Technische Universität Dresden = Dresden University of Technology (TU Dresden), Città della Salute e della Scienza University-Hospital, Medicine Charles University and General Faculty Hospital in Prague, Medicana International [Istanbul, Turkey], Centre hospitalier universitaire de Nantes (CHU Nantes), Hôpital Haut-Lévêque [CHU Bordeaux], CHU Bordeaux [Bordeaux], University Hospital Basel [Basel], University of Genova, San Martino Hospital, Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), American University of Beirut [Beyrouth] (AUB), Università degli Studi di Milano-Bicocca = University of Milano-Bicocca (UNIMIB), Chaim Sheba Medical Center, Centre de Recherche Saint-Antoine (CRSA), and Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)
- Subjects
Adult ,Transplantation ,Transplantation Conditioning ,[SDV]Life Sciences [q-bio] ,Hematopoietic Stem Cell Transplantation ,Graft vs Host Disease ,Hematology ,Comparison of HLA-mismatched unrelated donor transplantation with post-transplant cyclophosphamide versus HLA-haploidentical transplantation ,Settore MED/15 - MALATTIE DEL SANGUE ,Leukemia, Myeloid, Acute ,Transplantation, Haploidentical ,Humans ,Unrelated Donors ,Cyclophosphamide ,Retrospective Studies - Abstract
HLA-haploidentical allogeneic hematopoietic stem cell transplantation (Haplo-HCT) is frequently used as treatment for patients with active acute myeloid leukemia (AML). Here, we investigated whether 9/10 HLA-mismatched unrelated donor transplantation (MMUD-HCT) with post-transplant cyclophosphamide (PTCy) is an adequate alternative. Inclusion criteria in this retrospective registry study consisted of adult patients, first HCT with a Haplo donor or MMUD between 2010 and 2020 using PTCy as graft-versus-host disease (GVHD) prophylaxis, and primary refractory or relapsed disease. MMUD patients were pair-matched 1 to 2 with Haplo-recipients. A total of 73 MMUD patients met the inclusion criteria. Their data were compared to those of 146 Haplo patients in a matched-pair analysis. Median follow-up was 27 months in MMUD patients and 36 months in Haplo recipients. Two-year incidences of relapse and non-relapse mortality (NRM) were 40% and 18% in MMUD patients, respectively, versus 50% (P = 0.23) and 24% (P = 0.18) in Haplo recipients. Two-year leukemia-free survival (LFS) and overall survival (OS) was 42% and 46% in MMUD recipients, respectively, versus 26% (P = 0.1) and 28% (P = 0.061) in Haplo-patients. In conclusions, in AML patients with active disease at transplantation, MMUD-HCT results in at least comparable outcomes to Haplo-HCT when PTCy is applied. We report a paired-matched analysis of HLA-mismatched unrelated donor transplantation (MMUD, n = 73) versus HLA-haploidentical transplantation (n = 146) in AML patients with active disease at transplantation. Two-year leukemia-free survival and overall survival was 42% and 46% in MMUD recipients, respectively, versus 26% (P = 0.1) and 28% (P = 0.061) in Haplo-patients.
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- 2022
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18. Characterization of chromosome 11 breakpoints and the areas of deletion and amplification in patients with newly diagnosed acute myeloid leukemia
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Zdenek Krejcik, I Sarova, Jana Brezinova, Petr Soukup, Anna Jonasova, Jaroslav Cermak, Zuzana Zemanova, Jan Vydra, Kyra Michalova, and Dagmar Bystricka
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Cancer Research ,Bacterial artificial chromosome ,medicine.diagnostic_test ,Chromosome Breakpoints ,Myeloid leukemia ,Chromosome ,Biology ,medicine.disease ,Molecular biology ,Leukemia ,hemic and lymphatic diseases ,Gene duplication ,Genetics ,medicine ,Chromosome 21 ,Fluorescence in situ hybridization - Abstract
Chromosome 11 abnormalities are found in many hematological malignancies. In acute myeloid leukemia (AML), a proto-oncogene MLL (11q23.3) is frequently altered. However, rearrangements involving other regions of chromosome 11 have been reported. Therefore, we have characterized the chromosome 11 breakpoints and common deleted and amplified areas in the bone marrow or peripheral blood cells of newly diagnosed patients with AML. Using molecular-cytogenetic methods (multicolor fluorescence in situ hybridization (mFISH), multicolor banding (mBAND), microarrays, and FISH with bacterial artificial chromosome (BAC) probes, chromosome 11 abnormalities were delineated in 54 out of 300 (18%) newly diagnosed AML patients. At least 36 different chromosome 11 breakpoints were identified; two were recurrent (11p15.4 in the NUP98 gene and 11q23.3 in the MLL gene), and three were possibly nonrandom: 11p13 (ch11:29.31-31.80 Mb), 11p12 (ch11:36.75-37.49 Mb) and 11q13.2 (68.31-68.52 Mb). One new MLL gene rearrangement is also described. No commonly deleted region of chromosome 11 was identified. However, some regions were affected more often: 11pter-11p15.5 (n = 4; ch11:0-3.52 Mb), 11p14.1-11p13 (n = 4; ch11:28.00-31.00 Mb) and 11p13 (n = 4; ch11:31.00-31.50 Mb). One commonly duplicated (3 copies) region was identified in chromosomal band 11q23.3-11q24 (n = 9; ch11:118.35-125.00 Mb). In all eight cases of 11q amplification (>3 copies), only the 5' part of the MLL gene was affected. This study highlights several chromosome 11 loci that might be important for the leukemogeneic process in AML.
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- 2013
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19. Invasive aspergillosis in patients with hematological malignancies in the Czech and Slovak republics: Fungal InfectioN Database (FIND) analysis, 2005–2009
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Nad'a Mallátová, Michal Kouba, Jan Haber, Zdenek Racil, Peter Múdry, Eva Bojtárová, Lubos Drgona, Renata Foralová, Elena Tóthová, Lucia Masárová, Barbora Weinbergerova, Jan Muzik, Barbora Ziakova, Jan Vydra, Tomáš Guman, Jiri Mayer, Daniela Sejnová, Iva Kocmanová, Petr Cetkovsky, Kristina Forsterova, and Vít Kandrnal
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Male ,Antifungal Agents ,Databases, Factual ,Neutrophils ,Salvage therapy ,Aspergillosis ,Gastroenterology ,Mannans ,Echinocandins ,0302 clinical medicine ,Hematological malignancy ,Diagnosis ,030212 general & internal medicine ,Child ,Czech Republic ,0303 health sciences ,Leukemia ,General Medicine ,Middle Aged ,3. Good health ,Infectious Diseases ,Child, Preschool ,Acute Disease ,Absolute neutrophil count ,Female ,Bronchoalveolar Lavage Fluid ,medicine.drug ,Adult ,Microbiology (medical) ,Slovakia ,medicine.medical_specialty ,Adolescent ,Echinocandin ,Neutropenia ,Young Adult ,03 medical and health sciences ,Internal medicine ,medicine ,Humans ,Antifungal treatment ,Risk factor ,Aged ,Retrospective Studies ,Voriconazole ,Lung Diseases, Fungal ,030306 microbiology ,business.industry ,Galactose ,Retrospective cohort study ,Triazoles ,medicine.disease ,Pyrimidines ,Immunology ,Invasive aspergillosis ,business - Abstract
Summary Objectives To evaluate risk factors, diagnostic procedures, and treatment outcomes of invasive aspergillosis (IA) in patients with hematological malignancies. Methods A retrospective analysis of data from proven/probable IA cases that occurred from 2005 to 2009 at 10 hematology centers was performed. Results We identified 176 IA cases that mainly occurred in patients with acute leukemias (58.5%), mostly those on induction/re-induction treatments (39.8%). Prolonged neutropenia was the most frequent risk factor for IA (61.4%). The lungs were the most frequently affected site (93.8%) and computed tomography detected abnormalities in all episodes; however, only 53.7% of patients had findings suggestive of IA. Galactomannan (GM) detection in serum or bronchoalveolar lavage fluid (positive in 79.1% and 78.8% of episodes, respectively) played a crucial role in IA diagnosis. Neutrophil count and antifungal prophylaxis did not influence the GM positivity rate, but empirical therapy decreased this rate (in serum). Of the IA cases, 53.2% responded to initial antifungal therapy. The combination of voriconazole and echinocandin, even as initial or salvage therapy, did not perform better than voriconazole monotherapy ( p =0.924 for initial therapy and p =0.205 for salvage therapy). Neutrophil recovery had a significant role in the response to initial (but not salvage) antifungal therapy. Conclusions Our retrospective analysis identified key diagnostic and treatment characteristics, and this understanding could improve the management of hematological malignancy patients with IA.
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- 2013
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20. Enterococcal Bacteremia Is Associated With Increased Risk of Mortality in Recipients of Allogeneic Hematopoietic Stem Cell Transplantation
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Ryan Shanley, Jan Vydra, Celalettin Ustun, Angela R. Smith, Ige A. George, Jo Anne H. Young, and Daniel J. Weisdorf
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Adult ,Male ,Microbiology (medical) ,Adolescent ,Minnesota ,medicine.medical_treatment ,Mucocutaneous zone ,Bacteremia ,Hematopoietic stem cell transplantation ,Hospitals, University ,Young Adult ,Risk Factors ,medicine ,Humans ,Transplantation, Homologous ,Child ,Gram-Positive Bacterial Infections ,Survival analysis ,Aged ,Retrospective Studies ,Cross Infection ,biology ,business.industry ,Hematopoietic Stem Cell Transplantation ,Infant ,Vancomycin Resistance ,Retrospective cohort study ,Middle Aged ,biochemical phenomena, metabolism, and nutrition ,medicine.disease ,biology.organism_classification ,Survival Analysis ,Transplantation ,Treatment Outcome ,Infectious Diseases ,Enterococcus ,Child, Preschool ,Immunology ,Vancomycin ,Female ,business ,medicine.drug - Abstract
Enterococci are an important cause of healthcare-associated infections. We retrospectively analyzed risk factors and outcome of vancomycin-resistant enterococci (VRE) and vancomycin-sensitive enterococci (VSE) infections.Seven hundred fifty-two patients who received hematopoietic stem cell transplants from 2004 through 2008 at the University of Minnesota were included.Ninety-three patients had enterococcal bloodstream infection (BSI) during the first year after transplant. Vancomycin resistance was observed in 66% and 31% of isolates in adults and children, respectively. Cumulative incidence of VRE and VSE bacteremia was 6.6% (95% confidence interval [CI], 4.8%-8.4%) and 5.7% (95% CI, 4.0%-7.4%), respectively. Colonization with VRE before or after transplant was a risk factor for VRE bacteremia (odds ratio [OR], 3.3 [95% CI, 1.3-8.3] and 7.0 [95% CI, 4.0-14.8], respectively). Delay in engraftment increased the incidence of VRE bacteremia from 4.5% (95% CI, 2.9-6.6) if engrafted before day 21 and to 15% (95% CI, 3.2%-38%) if engrafted between days 36 and 42. In adults, mortality 30 days after infection was 38% for both VRE (95% CI, 25%-54%) and VSE cases (95% CI, 21%-62%). The hazard ratio for all-cause mortality up to 1 year after transplant was 4.2 (95% CI, 3.1-6.9) and 2.7 (95% CI, 1.4-5.1) for patients with VRE and VSE BSIs, respectively, compared to patients without enterococcal BSI. In pediatric patients, mortality 30 days after VRE and VSE bacteremia was 20% (95% CI, 5.4%-59%) and 4.5% (95% CI, .6%-28%), respectively.High rates of vancomycin resistance and association of enterococcal infections with significant mortality warrant further efforts to optimize prevention and management of these infections.
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- 2012
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21. Candidatus Neoehrlichia mikurensis infection identified in 2 hematooncologic patients: benefit of molecular techniques for rare pathogen detection
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Sona Pekova, Renata Haugvicova, Tomas Kozak, David Hardekopf, Radek Cmejla, Hana Kabickova, Jan Vydra, Sona Frankova, Tereza Jancuskova, and Oldrich Mazal
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DNA, Bacterial ,Male ,Microbiology (medical) ,Fastidious organism ,Pathogen detection ,Biology ,DNA, Ribosomal ,Fever of Unknown Origin ,Polymerase Chain Reaction ,law.invention ,Immunocompromised Host ,Ticks ,law ,Animals ,Humans ,Molecular diagnostic techniques ,Polymerase chain reaction ,Ehrlichiosis ,Sequence Analysis, DNA ,General Medicine ,Middle Aged ,Virology ,Anaplasmataceae ,Microscopy, Electron ,Infectious Diseases ,Molecular Diagnostic Techniques ,Hematologic Neoplasms ,Anaplasmataceae Infections ,Female ,Candidatus Neoehrlichia mikurensis - Abstract
Hematooncologic patients often host rare or fastidious pathogens. Using 16S rDNA sequencing and transmission electron microscopy, we have identified 2 lymphoma patients infected with Candidatus Neoehrlichia mikurensis. In both individuals, the clinical presentation suggested ehrlichiosis-like syndrome. We believe that molecular techniques open new vistas in the field of pathogen detection.
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- 2011
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22. HHV-6 chromosomal integration in allogeneic haematopoietic stem cell transplantation
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Ales Briksi, Marketa Markova-Stastna, Renata Formankova, Petr Sedlacek, Michal Kouba, Miroslav Zajac, Petr Hubacek, Petra Chramostova, Petra Keslova, Ivana Zelezna, Veronika Valkova, Jana Sumova, Jan Vydra, Petr Cetkovsky, and Daniela Janeckova
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Transplantation ,Haematopoiesis ,Infectious Diseases ,Virology ,Cancer research ,Stem cell ,Biology - Published
- 2016
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23. Spontaneous desorption time of flight mass spectrometry for the analysis of chemical reactions in thin solid films of a few monolayers and up to the micrometer regime
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Silvia Mittler, Heiko Einsiedel, Rainer Sterthaus, Peter Wohlfart, Jan Vydra, and Stephan Krämer
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chemistry.chemical_classification ,Annealing (metallurgy) ,Metals and Alloys ,Analytical chemistry ,Surfaces and Interfaces ,Polymer ,Mass spectrometry ,Chemical reaction ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,chemistry.chemical_compound ,Methacrylic acid ,chemistry ,Monolayer ,Materials Chemistry ,Fourier transform infrared spectroscopy ,Thin film - Abstract
We demonstrate spontaneous desorption time of flight mass spectrometry investigations on chemical reactions within thin solid films with a thickness of a few monolayers deposited by the Langmuir–Blodgett–Kuhn (LBK) technique and in the μm regime by spincoating. The photo induced decomposition of the polymeric system of a dye, disperse red 1, covalently bound to polymethylmethacrylate is one of the systems under investigation. Films of a thickness, which are typical for channel waveguides, were illuminated with UV and annealed subsequently. The decomposition of the dye after the illumination could be proven by the decrease of the mass peaks of intact dye and the increase of dye fragments. The annealing process leads to an evaporation of the loosened dye, its fragments and fragments of the polymer backbone. The results are compared with in situ bleaching experiments observed by time dependent photo thermal beam deflection. The second system consists of a poly[(tert-butylacrylate)-co-CN(3-methacroylpropyl)-3,4-dimethylmaleicacidanhydride)] multilayer LBK sample that is cross-linked via UV irradiation and saponified by wet HCl treatment to achieve a thin film poly(methacrylic acid) network. The time development of the saponification is observed by the mass spectrometry and Fourier Transform Infrared Spectroscopy.
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- 2002
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24. Nonlinear Optical Active Polymethacrylates with High Glass Transition Temperatures
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M. Eckl, Martin Sprave, Manfred Eich, Peter Strohriegl, and Jan Vydra
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chemistry.chemical_classification ,Nonlinear optical ,Materials science ,Chemical engineering ,chemistry ,Relaxation (NMR) ,Polymer chemistry ,Copolymer ,Polymer ,Chromophore ,Condensed Matter Physics ,Glass transition ,Methacrylate - Abstract
Chromophore relaxation is still one of the major problems with NLO polymers. One strategy to overcome this problem is the synthesis of polymers with high glass transition temperatures. We have prepared a number of polymers by copolymerization of NLO-active methacrylates with the bulky adamantyl methacrylate. This leads to polymers with glass transition temperatures up to 190 °C. The synthesis and properties of these polymers are reported in detail. The polymers show a good long term stability of the electrooptic coefficient (r33) at elevated temperatures. So polymer 3c with a bisazo chromophore shows only a 25 % EO-coefficient decay after one month at 120 °C.
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- 1996
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25. Nonlinear optically active polymethacrylates with high glass transition temperatures
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Karl-Heinz Dr Etzbach, Stefan Dr Beckmann, Jan Vydra, Harry Müller, Manfred Eich, M. Eckl, and Peter Strohriegl
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chemistry.chemical_classification ,Spin coating ,Polymers and Plastics ,Comonomer ,Organic Chemistry ,Poling ,Polymer ,Condensed Matter Physics ,Methacrylate ,chemistry.chemical_compound ,chemistry ,Azobenzene ,Polymer chemistry ,Materials Chemistry ,Thermal stability ,Physical and Theoretical Chemistry ,Glass transition - Abstract
A number of novel nonlinear optically (NLO) active polymethacrylates were prepared from the NLO active methacrylates 2a–d with azobenzene side groups and the bulky comonomer 1-adamantyl methacrylate. The polymers exhibit unusually high glass transition temperatures between 160°C and 190°C. The copolymerization parameters of the monomer pair 1-adamantyl methacrylate (1)/Disperse red methacrylate 2b (r1 = 1,1 ± 0,2, r2 = 0,8 ± 0,2) show that the two monomers are incorporated almost statistically into the polymer chain. Polymers 3a–d are soluble in common organic solvents and excellent films can be obtained by spin coating. After poling in an electric field of 120 V/μm polymer 3b shows a large electrooptic (EO) coefficient (r33) of 25 pm/V at 633 nm. Within two weeks, only a negligible decay of 7% of the EO coefficient was observed at room temperature. On-line monitoring of the second harmonic generation (SHG) at 100°C showed a fast initial drop (10%) of the SHG signal and subsequently a slow decay of 20% within 10 h. Afterwards, the signal remained almost constant for further 5 h at 100°C. The novel polymers can thus be considered as easy processible NLO materials with a high thermal stability of the chromophore orientation obtained by poling.
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- 1995
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26. Photodecay mechanisms in side chain nonlinear optical polymethacrylates
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Manfred Eich, Theo Tschudi, Jan Vydra, and Hanno Beisinghoff
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chemistry.chemical_classification ,genetic structures ,Physics and Astronomy (miscellaneous) ,Analytical chemistry ,Quantum yield ,Nonlinear optics ,Polymer ,Chromophore ,Photochemistry ,Photobleaching ,chemistry ,Side chain ,Surface roughness ,Molar mass distribution ,sense organs - Abstract
The chemical and physical properties of photobleached nonlinear optical (NLO)‐polymethacrylates were studied in order to investigate photobleaching mechanisms. We have shown by three key measurement techniques (infrared‐spectroscopy, mass spectrometry, and gel permeation chromatography) that the predominant bleaching process is an irreversible decomposition of the NLO moieties accompanied by a broadening of the polymer molecular weight distribution. The quantum yield of the chromophore degradation determined by the evaluation of the bleaching kinetics fit is in agreement with typical data from comparable chromophores. It was found that bleaching causes an increase in surface roughness of NLO‐polymer films, causing an increase in waveguide loss. Smoothing of the film surface by an annealing step leads to a lowering of bleaching induced waveguide loss.
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- 1996
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27. Human Parainfluenza Virus Infection after Hematopoietic Stem Cell Transplantation: Risk Factors, Management, Mortality, and Changes over Time
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Jiří Slabý, John E. Wagner, Ryan Shanley, Jan Vydra, Celalettin Ustun, Angela R. Smith, Daniel J. Weisdorf, and Jo Anne H. Young
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Adult ,Transplantation Conditioning ,Adolescent ,medicine.medical_treatment ,Graft vs Host Disease ,Reduced intensity conditioning ,Hematopoietic stem cell transplantation ,Respiratory virus ,Human parainfluenza virus ,Antiviral Agents ,Respirovirus ,Article ,03 medical and health sciences ,Risk Factors ,Lower respiratory tract infection ,HCT (hematopoietic cell transplantation) ,Ribavirin ,medicine ,Humans ,Child ,Respiratory Tract Infections ,030304 developmental biology ,Retrospective Studies ,0303 health sciences ,Transplantation ,Paramyxoviridae Infections ,Respiratory tract infections ,030306 microbiology ,business.industry ,Incidence (epidemiology) ,Incidence ,Age Factors ,Hematopoietic Stem Cell Transplantation ,Hematology ,medicine.disease ,Survival Analysis ,United States ,3. Good health ,Human Parainfluenza Virus ,Upper respiratory tract infection ,Child, Preschool ,Histocompatibility ,Immunology ,business ,Unrelated Donors ,Infection ,Immunosuppressive Agents - Abstract
Human parainfluenza viruses (HPIVs) are uncommon, yet high-risk pathogens after hematopoietic stem cell transplant (HCT). We evaluated 5178 pediatric and adult patients undergoing HCT between 1974 and 2010 to determine the incidence, risk factors, response to treatment, and outcome of HPIV infection as well as any change in frequency or character of HPIV infection over time. HPIV was identified in 173 patients (3.3%); type 3 was most common (66%). HPIV involved upper respiratory tract infection (URTI; 57%), lower respiratory tract infection (LRTI; 9%), and both areas of the respiratory tract (34%), at a median of 62 days after transplantation. In more recent years, HPIV has occurred later after HCT, whereas the proportion with nosocomial infection and mortality decreased. Over the last decade, HPIV was more common in older patients and in those receiving reduced intensity conditioning (RIC). RIC was a significant risk factor for later (beyond day +30). HPIV infections, and this association was strongest in patients with URTI. HCT using a matched unrelated donor (MURD), mismatched related donor (MMRD), age 10 to 19 years, and graft-versus-host disease (GVHD) were all risk factors for HPIV infections. LRTI, early (
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28. Two-dimensional electrophoretic comparison of metastatic and non-metastatic human breast tumors using in vitrocultured epithelial cells derived from the cancer tissues
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Jan Vydra, David Coufal, Eva Buršíková, Eva Matoušková, Zuzana Velenská, Irena Selicharová, Jiří Jiráček, Kateřina Smutná, Marketa Prchalova, and Miloslav Sanda
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Adult ,Proteomics ,GPX1 ,Cancer Research ,Breast Neoplasms ,Biology ,lcsh:RC254-282 ,Peptide Mapping ,Breast cancer ,Surgical oncology ,medicine ,Tumor Cells, Cultured ,Genetics ,Humans ,Electrophoresis, Gel, Two-Dimensional ,Neoplasm Metastasis ,Aged ,Aged, 80 and over ,Nucleophosmin ,Cancer ,Epithelial Cells ,Middle Aged ,medicine.disease ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Molecular biology ,In vitro ,Neoplasm Proteins ,Oncology ,Proteome ,Female ,Research Article - Abstract
Background Breast carcinomas represent a heterogeneous group of tumors diverse in behavior, outcome, and response to therapy. Identification of proteins resembling the tumor biology can improve the diagnosis, prediction, treatment selection, and targeting of therapy. Since the beginning of the post-genomic era, the focus of molecular biology gradually moved from genomes to proteins and proteomes and to their functionality. Proteomics can potentially capture dynamic changes in protein expression integrating both genetic and epigenetic influences. Methods We prepared primary cultures of epithelial cells from 23 breast cancer tissue samples and performed comparative proteomic analysis. Seven patients developed distant metastases within three-year follow-up. These samples were included into a metastase-positive group, the others formed a metastase-negative group. Two-dimensional electrophoretical (2-DE) gels in pH range 4–7 were prepared. Spot densities in 2-DE protein maps were subjected to statistical analyses (R/maanova package) and data-mining analysis (GUHA). For identification of proteins in selected spots, liquid chromatography-tandem mass spectrometry (LC-MS/MS) was employed. Results Three protein spots were significantly altered between the metastatic and non-metastatic groups. The correlations were proven at the 0.05 significance level. Nucleophosmin was increased in the group with metastases. The levels of 2,3-trans-enoyl-CoA isomerase and glutathione peroxidase 1 were decreased. Conclusion We have performed an extensive proteomic study of mammary epithelial cells from breast cancer patients. We have found differentially expressed proteins between the samples from metastase-positive and metastase-negative patient groups.
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