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High-throughput and label-free protein nanopore-based sensors are extensively used in DNA sequencing, single-protein analysis, molecular sensing and chemical catalysis with single channel recording. These technologies show great potential for identifying various harmful substances linked to public health by addressing the limitations of current portability and the speed of existing techniques. In this review, we provide an overview of the fundamental principles of nanopore sensing, with a focus on chemical modification and genetic engineering strategies aimed at enhancing the detection sensitivity and identification accuracy of protein nanopores. The engineered protein nanopores enable direct sensing, while the introduction of aptamers and substrates enables indirect sensing, translating the physical structure and chemical properties of analytes into readable signals. These scientific discoveries and engineering efforts have provided new prospects for detecting and monitoring trace hazardous substances. [ABSTRACT FROM AUTHOR]

The morphological characteristics of metamorphosis in stamens of Anemone barbulata Turcz. were investigated using morphological and histological analyses. The results showed that stamens were transformed into either white sepaloid organs or more frequently green leaflike structures with successive variations. The extreme metamorphic stamen was represented as a three-lobed leaflike structure with a long stalk, highly consistent with the morphological characters of the normal leaves of the plant. It was hypothesized that the connective and two pollen sacs of the anther were transformed into the three lobes of the metamorphosed stamen, respectively. The depression and circinate stages were identified as the important and necessary processes in the transformation of stamens from axial to foliar organs, suggesting probably the alternative evolutionary process of the formation of anthers derived from foliar organs. The morphological traces of leaf, sepal, and carpel observed in the metamorphosed stamens suggested the homeotic transformations among these organs. The foliar stage in the ancestral stamens of angiosperms was reflected ontogenically in the metamorphosed stamens of A. barbulata. Our findings of a series of metamorphic stamens probably represent the morphological evidence to support the hypothesis that the flowers of angiosperms were derived from metamorphic leaves with the progressive development mode in the evolution of floral organs. [ABSTRACT FROM AUTHOR]

Messenger RNA-based therapeutics have shown tremendous potential, as demonstrated by the rapid development of messenger RNA based vaccines for COVID-19. Nevertheless, distribution of mRNA vaccines worldwide has been hampered by mRNA's inherent thermal instability due to in-line hydrolysis, a chemical degradation reaction. Therefore, predicting and understanding RNA degradation is a crucial and urgent task. Here we present RNAdegformer, an effective and interpretable model architecture that excels in predicting RNA degradation. RNAdegformer processes RNA sequences with self-attention and convolutions, two deep learning techniques that have proved dominant in the fields of computer vision and natural language processing, while utilizing biophysical features of RNA. We demonstrate that RNAdegformer outperforms previous best methods at predicting degradation properties at nucleotide resolution for COVID-19 mRNA vaccines. RNAdegformer predictions also exhibit improved correlation with RNA in vitro half-life compared with previous best methods. Additionally, we showcase how direct visualization of self-attention maps assists informed decision-making. Further, our model reveals important features in determining mRNA degradation rates via leave-one-feature-out analysis. [ABSTRACT FROM AUTHOR]

With the fast development of next-generation wireless communication and radar sensing, the millimeter-wave frequency band is becoming more and more important due to its rich spectrum, wide bandwidth, and ability to support the miniaturization of antennas and circuits , , ,. High-performance, low-loss, and low-cost millimeter-wave circuits and modules are the key elements for wireless front-end systems. For planar transmission lines, such as microstrip lines and coplanar waveguides, they are very easy to integrate with other circuits for low-cost and low-profile physical designs. However, the high insertion loss and radiation loss from planar transmission lines limit their applications at the millimeter-waveband. As for rectangular and cylindrical waveguides, their main application is in the areas of low loss and high power handling, but their 3D structure is difficult to integrate with other planar passive and active circuits. The substrate-integrated waveguide (SIW) is a better way to merge the advantages of planar transmission lines and rectangular waveguides, but it still suffers from dielectric losses at the millimeter-wave frequency range. [ABSTRACT FROM AUTHOR]

The golden snub-nosed monkey (Rhinopithecus roxellana) is a typical arboreal group-living Old World primate. While limb preference has been extensively studied in this species, limb preference consistency has not yet been explored. Here, based on 26 R. roxellana adults, we investigated whether individuals exhibit consistent motor biases in manual- (e.g., unimanual feeding and social grooming) and foot-related (e.g., bipedal locomotion) tasks and whether limb preference consistency is influenced by increased social interactions during social grooming. Results showed no consistency in the direction or strength of limb preference among tasks, except for lateral strength in handedness for unimanual feeding and footedness in the initiation of locomotion. Population-level foot preference was only found among right-handers. Marked lateral bias was found in unimanual feeding, indicating that it may be a sensitive behavioural measure for assessing manual preference, especially for provisioned populations. This study not only improves our understanding of the relationship between hand and foot preference in R. roxellana but also reveals potential differential hemispheric regulation of limb preference and the influence of increased social interaction on handedness consistency. [ABSTRACT FROM AUTHOR]

Two mean-field models for polyelectrolytes in simultaneous electric field and pressure-driven flow field were developed and compared. The models predict migration perpendicular to the anti-parallel or parallel fields, where the migration is caused by electrohydrodynamic interactions calculated using either a short- or long-range approximation. Inputs for the mean-field models were determined from Brownian dynamics simulations in a simple shear flow. Both models qualitatively reproduce experimental observations of DNA focusing as reported in previous publications. Specifically, it is observed that combination of the shear and electric fields leads to polyelectrolyte motion in the direction transverse to the flow and electric field direction, which in turn leads to concentration of the polyelectrolyte in the centre of a microfluidic channel. Furthermore, both models predict that there is an optimal strength of electric field that leads to the narrowest distribution profile of the polyelectrolyte in the centre of the channel. The analysis suggests that this is due to dispersion induced by the electrohydrodynamic interactions. However, quantitative disagreement between the model predictions and the experimental data indicates that further progress in the model development is needed. [ABSTRACT FROM AUTHOR]

There is a great deal of spatial and temporal variation in the availability and nutritional quality of foods eaten by animals, particularly in temperate regions where winter brings lengthy periods of leaf and fruit scarcity. We analyzed the availability, dietary composition, and macronutrients of the foods eaten by the northern‐most golden snub‐nosed monkey (Rhinopithecus roxellana) population in the Qinling Mountains, China to understand food choice in a highly seasonal environment dominated by deciduous trees. During the warm months between April and November, leaves are consumed in proportion to their availability, while during the leaf‐scarce months between December and March, bark and leaf/flower buds comprise most of their diet. When leaves dominated their diet, golden snub‐nosed monkeys preferentially selected leaves with higher ratios of crude protein to acid detergent fiber. While when leaves were less available, bark and leaf/flower buds that were high in nonstructural carbohydrates and energy, and low in acid detergent fiber were selected. Southern populations of golden snub‐nosed monkey can turn to eating lichen, however, the population studied here in this lichen‐absent area have adapted to their cool deciduous habitat by instead consuming buds and bark. Carbohydrate and energy rich foods appear to be the critical resources required for the persistence of this species in temperate habitat. The dietary flexibility of these monkeys, both among seasons and populations, likely contributes to their wide distribution over a range of habitats and environments. [ABSTRACT FROM AUTHOR]

MicroRNAs (miRNAs) are small molecule RNAs widely involved in responses to plant abiotic stresses. We performed small RNA sequencing of cotton anthers at four developmental stages under normal and high temperature (NT and HT, respectively) conditions to investigate the stress response characteristics of miRNA to HT. A total of 77 miRNAs, including 33 known miRNAs and 44 novel miRNAs, were identified, and 41 and 28 miRNAs were differentially expressed under NT and HT stress conditions, respectively. The sporogenous cell proliferation (SCP), meiotic phase (MP), microspore release period (MRP), and pollen maturity (PM) stages had 10 (including 12 miRNAs), four (including six miRNAs), four (including five miRNAs), and seven (including 11 miRNAs) HT stress-responsive miRNA families, respectively, which were identified after removing the changes in genotype-specific miRNAs under NT condition. Seven miRNA families (miR2949, miR167, and miR160 at the SCP stage; miR156 and miR172 at the MP stage; miR156 at the MRP stage; and miR393 and miR3476 at the PM stage), which had expression abundance of more than 10% of the total expression abundance, served as the main regulators responding to HT stress with positive or negative regulation patterns. These miRNAs orchestrated the expression of the corresponding target genes and led to different responses in the HT-tolerant and the HT-sensitive lines. The results revealed that the HT stress response of miRNAs in cotton anthers were stage-specific and differed with the development of anthers. Our study may enhance the understanding of the response of miRNAs to HT stress in cotton anthers and may clarify the mechanism of plant tolerance to HT stress. [ABSTRACT FROM AUTHOR]

Abstract Composite structure of montmorillonites(Mt)with graphene oxide (GO) or reduced graphene oxide (rGO) was successfully synthesized by grafting with 3-aminopropyl triethoxysilane (APTES) and hydrazine hydrate reduction. XRD, BET, FTIR, SEM and XPS analysis were used to characterize the surface and structure properties of the as-obtained products. Measurement results suggested that these two composites were similar in morphology and pore structure, but significantly different in the surface oxygenic groups. Adsorption properties of the Mt/GO and Mt/rGO were investigated using methylene blue (MB) as the target material. Compare to original Mt, APTES modified Mt and Mt/rGO, Mt/GO exhibited the highest adsorption capacity of 641.1 mg/g at the initial concentration of 750 mg/L, and MB was removed by 94.3% within 5min. Mechanism analysis suggested that the high absorption performance of the composite was determined by the high specific surface area, oxygenic groups of GO, high adsorption capacity of montmorillonite as well as the synergistic effect between the Mt and graphene oxide nanosheets. Graphical abstract Unlabelled Image [ABSTRACT FROM AUTHOR]

Polyploids are cells or organisms with a genome consisting of more than two sets of homologous chromosomes. Polyploid plants have important traits that facilitate speciation and are thus often model systems for evolutionary, molecular ecology and agricultural studies. However, due to their unusual mode of inheritance and double‐reduction, diploid models of population genetic analysis cannot properly be applied to autopolyploids. To overcome this problem, we developed a software package entitled vcfpop to perform a variety of population genetic analyses for autopolyploids, such as parentage analysis, analysis of molecular variance, principal coordinates analysis, hierarchical clustering analysis and Bayesian clustering. We used three data sets to evaluate the capability of vcfpop to analyse large data sets on a desktop computer. This software is freely available at http://github.com/huangkang1987/vcfpop. [ABSTRACT FROM AUTHOR]