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Marine organisms have been reported to be valuable sources of bioactive molecules that have found applications in different industrial fields. From organism sampling to the identification and bioactivity characterization of a specific compound, different steps are necessary, which are time- and cost-consuming. Thanks to the advent of the -omic era, numerous genome, metagenome, transcriptome, metatranscriptome, proteome and microbiome data have been reported and deposited in public databases. These advancements have been fundamental for the development of in silico strategies for basic and applied research. In silico studies represent a convenient and efficient approach to the bioactivity prediction of known and newly identified marine molecules, reducing the time and costs of “wet-lab” experiments. This review focuses on in silico approaches applied to bioactive molecule discoveries from marine organisms. When available, validation studies reporting a bioactivity assay to confirm the presence of an antioxidant molecule or enzyme are reported, as well. Overall, this review suggests that in silico approaches can offer a valuable alternative to most expensive approaches and proposes them as a little explored field in which to invest.

Extreme environments are characterized by peculiar conditions, such as hypoxia/anoxia, freezing/heat temperatures, and desiccation. With climate change, more and more habitats are facing extreme conditions and living communities are finding ways to adapt in order to survive. In this study, we show several species which have been shown to adapt to marine extreme conditions also via miRNA-mediated responses. miRNAs are a class of small non-coding RNAs that mediate gene regulation via interactions with transcripts. Their action can directly or indirectly regulate pathways that can result in a response to a specific condition. Furthermore, the study of these miRNA-mediated responses could help in the biotechnological field for their application in the development of environmental biomarkers of stress conditions, or in the genetic engineering of algal species for the production of high-value compounds.