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Land-use conversion and resulting habitat fragmentation can affect the source(s) of primary productivity that fuels food webs and alter their structure in ways that leads to biodiversity loss. We investigated the effects of landscape modification on food webs in the Araguaia River floodplain in central Brazil using the top predator, and indicator species Caiman crocodilus (Crocodilia, Alligatoridae). We measured carbon (δ13C) and nitrogen (δ15N) isotope values of three tissues with different isotopic incorporation rates to evaluate spatial and temporal changes in caiman isotopic niche width with hierarchical Bayesian models that accounted for habitat use, intraspecific trait variation (sex and body size), and landscape attributes (composition and configuration). We also measured δ13C values of essential amino acids to assess if different primary producers are fueling aquatic food webs in natural and anthropogenic areas. Spatial analysis showed that caiman in agricultural areas had larger isotopic niche widths, which likely reflects some use of terrestrial resources in environments dominated by C4 plants. Patterns in δ13C values among essential amino acids were clearly different between natural and anthropogenic habitats. Overall, our findings suggest that caimans can persist in heterogeneous landscapes fueled by natural and agricultural energy sources of energy, which has implications for effectively managing such landscapes to maximize biodiversity.

Spatial patterns of stable isotopes in animal tissues or “isoscapes” can be used to investigate animal origins in a range of ecological and forensic investigations. Here, we developed a feather hydrogen isotope (δ2Hf) isoscape for Brazil based on 192 samples of feathers from the family Thraupidae from scientific collections. Raw values of δ2Hf ranged from -107.3 to +5.0‰, with higher values at the Caatinga biome (northeast Brazil) and lower values at the Amazon and Pantanal. A Random Forest (RF) method was used to model the spatial surface, using a range of environmental data as auxiliary variables. The RF model indicated a negative relationship between δ2Hf and Mean Annual Precipitation, Precipitation in the Warmest Quarter, and Annual Temperature Range and positive relationships for amount-weighted February-April precipitation δ2H (δ2Hp(Feb-April)) and Mean Annual Solar Radiation. Modelled δ2Hf values ranged from -85.7 to -13.6‰. Ours is the first δ2Hf isoscape for Brazil that can greatly assist our understanding of both ecological and biogeochemical processes controlling spatial variation in δ2H for this region. This isoscape can be used with caution, due to its poor predictive power (as found in other tropical regions) and can benefit from new sample input, new GNIP data, ecological and physiological studies, and keratin standard material better encompassing the range in feather samples from Brazil. So, we encourage new attempts to build more precise feather H isoscapes, as well as isoscapes based on other elements.

The Neotropics harbor some of the most diversified woody species in the world, and to understand the nutrient dynamics in these ecosystems, it is crucial to understand the role of plant taxonomy. In addition, biological nitrogen (N) fixation (BNF) in the tropics is one of the key processes affecting the global N cycle. Our objective was to (i) investigate the role of taxonomy and sampling site as predictors of foliar carbon (C) and N concentration and its stable isotopes (i.e., δ13C and δ15N); (ii) assess differences in foliar N, C:N ratio, and δ15N among three functional groups: species of N2-fixers and non-fixers of the Fabaceae family, as well as non-Fabaceae species; and (iii) examine the effect of wood density on tree foliar properties. We hypothesized that Fabaceae specimens in symbiosis with N2-fixers would possess a higher foliar N than non-fixing plants, including those of the Fabaceae family, as well as high-density trees would have higher foliar C and C:N ratio relative to low-density trees, where the latter invest in nutrients instead of structural C. We used a data set composed of 3,668 specimens sampled in three main biomes of Brazil: Amazon, Atlantic Forest, and Cerrado. The partitioning of variance had a higher influence of taxonomy on leaf C, N, and C:N ratio. Conversely, foliar δ13C and δ15N were environmentally constrained. While family was the most important taxonomy level for C, N, and C:N ratio, species played a major role for δ13C and δ15N. Foliar N followed the pattern fixers > non-fixers > non-Fabaceae, while C:N ratio had an opposite trend. In addition, foliar C was correlated with wood density, where high-density > medium-density and low-density woods. The large variability of δ15N was observed among Fabaceae species, demonstrates the complexity of using δ15N as an indicator of BNF. The higher foliar N of Fabaceae non-fixers than non-Fabaceae specimens support the hypothesis that an N-demanding lifestyle is an inherent pattern in this family. Lastly, although observed in some studies, the prediction of foliar properties using wood density is challenging, and future research on this topic is needed.

The Amazon Basin is at the center of an intensifying discourse about deforestation, land-use, and global change. To date, climate research in the Basin has overwhelmingly focused on the cycling and storage of carbon (C) and its implications for global climate. Missing, however, is a more comprehensive consideration of other significant biophysical climate feedbacks [i.e., CH4, N2O, black carbon, biogenic volatile organic compounds (BVOCs), aerosols, evapotranspiration, and albedo] and their dynamic responses to both localized (fire, land-use change, infrastructure development, and storms) and global (warming, drying, and some related to El Niño or to warming in the tropical Atlantic) changes. Here, we synthesize the current understanding of (1) sources and fluxes of all major forcing agents, (2) the demonstrated or expected impact of global and local changes on each agent, and (3) the nature, extent, and drivers of anthropogenic change in the Basin. We highlight the large uncertainty in flux magnitude and responses, and their corresponding direct and indirect effects on the regional and global climate system. Despite uncertainty in their responses to change, we conclude that current warming from non-CO2 agents (especially CH4 and N2O) in the Amazon Basin largely offsets—and most likely exceeds—the climate service provided by atmospheric CO2 uptake. We also find that the majority of anthropogenic impacts act to increase the radiative forcing potential of the Basin. Given the large contribution of less-recognized agents (e.g., Amazonian trees alone emit ~3.5% of all global CH4), a continuing focus on a single metric (i.e., C uptake and storage) is incompatible with genuine efforts to understand and manage the biogeochemistry of climate in a rapidly changing Amazon Basin.

The impact of exotic species on heterogeneous native tropical forest requires the understanding on which temporal and spatial scales these processes take place. Functional tracers such as carbon (δ13C) and nitrogen (δ15N) isotopic composition in the soil-plant system might help track the alterations induced by the exotic species. Thus, we assess the effects from the removal of the exotic species eucalyptus (Corymbia cytriodora) in an Atlantic forest Reserve, and eucalyptus removal on the alteration of the nutrient dynamics (carbon and nitrogen). The hypotheses were: (1) the eucalyptus permanence time altered δ13C and δ15N in leaves, soils and litter fractions (leaves, wood, flowers + fruits, and rest); and (2) eucalyptus removal furthered decomposition process of the soil organic matter. Hence, we determined the soil granulometry, the δ13C and δ15N in leaves, in the superficial soil layer, and litter in three sites: a secondary forest in the Atlantic forest, and other two sites where eucalyptus had been removed in different times: 12 and 3 months ago (M12 and M3, respectively). Litter samples presented intermediate δ13C and δ15N values in comparison with leaves and soil. In the M3, the greater δ13C values in both litter rest fraction and soil indicate the presence, cycling and soil incorporation of C, coming from the C4 photosynthesis of grassy species (Poaceae). In the secondary forest, the soil δ15N values were twice higher, compared with the eucalyptus removal sites, revealing the negative influence from these exotic species upon the ecosystem N dynamics. In the M12, the leaves presented higher δ13C mean value and lower δ15N values, compared with those from the other sites. The difference of δ13C values in the litter fractions regarding the soil led to a greater fractioning of 13C in all sites, except the flower + fruit fractions in the secondary forest, and the rest fraction in the M3 site. We conclude that the permanence of this exotic species and the eucalyptus removal have altered the C and N isotopic and elemental compositions in the soil-plant system. Our results suggest there was organic matter decomposition in all litter fractions and in all sites. However, a greater organic matter decomposition process was observed in the M3 soil, possibly because of a more intense recent input of vegetal material, as well as the presence of grassy, easily-decomposing herbaceous species, only in this site. Therefore, the dual-isotope approach generated a more integrated picture of the impact on the ecosystem after removing eucalyptus in this secondary Atlantic forest, and could be regarded as an option for future eucalyptus removal studies.

Ponds arising from groundwater in Cerrado of Central Brazil are oligotrophic but highly biodiverse environments. In this study, we used stable isotope ratios to test if there are variations in carbon and nitrogen acquisition by different primary food sources and if they are influenced by seasonality in a well-preserved pond. We hypothesized that periphyton is the main food source for macrophyte-associated fauna. We found that δ13C, but not δ15N, can distinguish between primary food sources; however, the isotopic signatures of food sources did not differ significantly between seasons. The δ15N values of macrophyte-associated fauna were significantly higher for predators compared with other trophic groups, but δ13C values did not differ significantly between groups. Emergent macrophytes and periphyton were the main food sources for scrapers (contribution of 42.5%) and collector-gatherers (contribution of 41.6%), respectively. Compared with emergent macrophytes, submerged macrophytes were associated with a greater abundance of fauna and algal biomass but were not a significant food source for associated fauna. Our findings demonstrate that in this small shallow oligotrophic pond in the Cerrado, the stable isotope ratios of carbon and nitrogen of food sources did not vary between seasons but did differ between aquatic macrophyte life forms. We point out the different functional roles of macrophyte life forms, with emergent macrophytes serving as an important food resource, while submerged macrophytes mainly provide physical structure.

Background Nitrogen (N) is an important macronutrient that controls the productivity of ecosystems and biological nitrogen fixation (BNF) is a major source of N in terrestrial systems, particularly tropical forests. Bamboo dominates theses forests, but our knowledge regarding the role of bamboo in ecosystem functioning remains in its infancy. We investigated the importance of a native bamboo species to the N cycle of a Neotropical forest. Methods We selected 100 sample units (100 m2 each) in a pristine montane Atlantic Forest, in Brazil. We counted all the clumps and live culms of Merostachys neesii bamboo and calculated the specific and total leaf area, as well as litter production and respective N content. Potential N input was estimated based on available data on BNF rates for the same bamboo species, whose N input was then contextualized using information on N cycling components in the study area. Results With 4,000 live culms ha−1, the native bamboo may contribute up to 11.7 kg N ha−1 during summer (January to March) and 19.6 kg N ha−1 in winter (July to September). When extrapolated for annual values, M. neesii could contribute more than 60 kg N ha−1y−1. Discussion The bamboo species’ contribution to N input may be due to its abundance (habitat availability for microbial colonization) and the composition of the free-living N fixer community on its leaves (demonstrated in previous studies). Although some N is lost during decomposition, this input could mitigate the N deficit in the Atlantic Forest studied by at least 27%. Our findings suggest that M. neesii closely regulates N input and may better explain the high diversity and carbon stocks in the area. This is the first time that a study has investigated BNF using free-living N fixers on the phyllosphere of bamboo.

Several previous studies on targeted food items using carbon and nitrogen stable isotope ratios in Brazil have revealed that many of the items investigated are adulterated; mislabeled or even fraud. Here, we present the first Brazilian isotopic baseline assessment that can be used not only in future forensic cases involving food authenticity, but also in human forensic anthropology studies. The δ13C and δ15N were determined in 1245 food items and 374 beverages; most of them made in Brazil. The average δ13C and δ15N of C3 plants were −26.7 ± 1.5‱, and 3.9 ± 3.9‱, respectively, while the average δ13C and δ15N of C4 plants were −11.5 ± 0.8‱ and 4.6 ± 2.6‱, respectively. The δ13C and δ15N of plant-based processed foods were −21.8 ± 4.8‱ and 3.9 ± 2.7‱, respectively. The average δ13C and δ15N of meat, including beef, poultry, pork and lamb were -16.6 ± 4.7‱, and 5.2 ± 2.6‱, respectively, while the δ13C and δ15N of animal-based processed foods were −17.9 ± 3.3‱ and 3.3 ± 3.5‱, respectively. The average δ13C of beverages, including beer and wine was −22.5 ± 3.1‱. We verified that C-C4 constitutes a large proportion of fresh meat, dairy products, as well as animal and plant-based processed foods. The reasons behind this high proportion will be addressed in this study.

Spatial patterns of stable isotopes in animal tissues or "isoscapes" can be used to investigate animal origins in a range of ecological and forensic investigations. Here, we developed a feather hydrogen isotope (δ2Hf) isoscape for Brazil based on 192 samples of feathers from the family Thraupidae from scientific collections. Raw values of δ2Hf ranged from -107.3 to +5.0‰, with higher values at the Caatinga biome (northeast Brazil) and lower values at the Amazon and Pantanal. A Random Forest (RF) method was used to model the spatial surface, using a range of environmental data as auxiliary variables. The RF model indicated a negative relationship between δ2Hf and Mean Annual Precipitation, Precipitation in the Warmest Quarter, and Annual Temperature Range and positive relationships for amount-weighted February-April precipitation δ2H (δ2Hp(Feb-April)) and Mean Annual Solar Radiation. Modelled δ2Hf values ranged from -85.7 to -13.6‰. Ours is the first δ2Hf isoscape for Brazil that can greatly assist our understanding of both ecological and biogeochemical processes controlling spatial variation in δ2H for this region. This isoscape can be used with caution, due to its poor predictive power (as found in other tropical regions) and can benefit from new sample input, new GNIP data, ecological and physiological studies, and keratin standard material better encompassing the range in feather samples from Brazil. So, we encourage new attempts to build more precise feather H isoscapes, as well as isoscapes based on other elements.