21 results on '"Cardoso, Pedro"'
Search Results
2. Partitioning taxon, phylogenetic and functional beta diversity into replacement and richness difference components
- Author
-
Cardoso, Pedro, Rigal, François, Carvalho, José C., Fortelius, Mikael, Borges, Paulo A. V., Podani, Janos, and Schmera, Denes
- Published
- 2014
- Full Text
- View/download PDF
3. Determining the relative roles of species replacement and species richness differences in generating beta-diversity patterns
- Author
-
Carvalho, José C., Cardoso, Pedro, and Gomes, Pedro
- Published
- 2012
- Full Text
- View/download PDF
4. Resolving the Azorean knot: a response to Carine & Schaefer (2010)
- Author
-
Triantis, Kostas A., Hortal, Joaquín, Amorim, Isabel, Cardoso, Pedro, Santos, Ana M. C., Gabriel, Rosalina, Borges, Paulo A. V., and Fernández-Palacios, José Maria
- Published
- 2012
- Full Text
- View/download PDF
5. Drivers of diversity in Macaronesian spiders and the role of species extinctions
- Author
-
Cardoso, Pedro, Arnedo, Miquel A., Triantis, Kostas A., and Borges, Paulo A. V.
- Published
- 2010
- Full Text
- View/download PDF
6. Distribution and historical aspects of Brazilian Stachytarpheta (Verbenaceae): Exploring a comprehensive dataset of taxonomically verified specimens.
- Author
-
Cardoso, Pedro Henrique, Colli-Silva, Matheus, Neto, Luiz Menini, and Trovó, Marcelo
- Subjects
- *
CERRADOS , *SPECIES diversity , *BIOGEOGRAPHY , *TWENTY-first century , *TWENTIETH century - Abstract
• This study introduces a taxonomically revised and credible occurrence dataset of Stachytarpheta in Brazil, including 4843 different specimens covering 90 species. • Stachytarpheta exhibit remarkable species richness and endemism particularly in the campos rupestres and savannas of the Espinhaço Range and Chapada dos Veadeiros. • A strong correlation exists between specimen occurrences and proximity to roads. Rarefaction curves show ongoing potential for species discovery in Tocantins state. • Temporal analysis shows an upward trend in occurrence records from 1970 to 2010 but declines in funding for scientific initiatives may have impeded recent collection efforts. Stachytarpheta (Verbenaceae) encompasses approximately 120 species distributed throughout tropical and subtropical regions of the Americas, with Brazil boasting the highest species richness (90 spp.) and endemism (82 spp.). This study introduces an updated, taxonomically revised, and credible occurrence dataset focusing on Stachytarpheta species in Brazil, comprising 4,843 records. This dataset results from expert revision of herbarium collections and integration with global repositories alongside national repositories in Brazil. It facilitates a thorough exploration of the temporal, geographical, and taxonomic patterns of Stachytarpheta across diverse regions and landscapes in Brazil. Stachytarpheta species and their occurrence records are concentrated in the states of Minas Gerais, Bahia, and Goiás, particularly in the campo rupestre and savanna formations of the Espinhaço Range and Chapada dos Veadeiros. Analysis of potential biases within our dataset revealed a correlation between specimen occurrences and proximity to roads. Rarefaction curves indicate ongoing potential for species discovery within the Cerrado and Caatinga domains, with the Tocantins state emerging as a particularly promising area for novel findings; therefore, presenting opportunities for exploration. The majority of the specimens are housed in Brazilian herbaria, particularly at RB, HUEFS, and CESJ. Temporal analysis of occurrence records showed an upward trend during the 20th century and the first decade of the 21st century, which can be attributed to the efforts of generalist collectors working mostly in Eastern and Central Brazil. Most collection efforts were carried out through Brazilian and European initiatives, often supported by local funding, especially during the mid-20th century. However, funding for scientific initiatives in Brazil has waned since the mid-2010s, potentially affecting recent trends in species recording. Our dataset serves as a resource enabling subsequent analysis delving into the systematics, biogeography, and conservation of this remarkable genus from open vegetation formations in Brazil. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
7. Biogeographic patterns of spiders in coastal dunes along a gradient of mediterraneity
- Author
-
Carvalho, José C., Cardoso, Pedro, Crespo, Luís C., Henriques, Sérgio, Carvalho, Rui, and Gomes, Pedro
- Published
- 2011
- Full Text
- View/download PDF
8. Distance decay 2.0 – A global synthesis of taxonomic and functional turnover in ecological communities.
- Author
-
Graco‐Roza, Caio, Aarnio, Sonja, Abrego, Nerea, Acosta, Alicia T. R., Alahuhta, Janne, Altman, Jan, Angiolini, Claudia, Aroviita, Jukka, Attorre, Fabio, Baastrup‐Spohr, Lars, Barrera‐Alba, José J., Belmaker, Jonathan, Biurrun, Idoia, Bonari, Gianmaria, Bruelheide, Helge, Burrascano, Sabina, Carboni, Marta, Cardoso, Pedro, Carvalho, José C., and Castaldelli, Giuseppe
- Subjects
BIOTIC communities ,MARINE ecology ,COMMUNITY change ,DIATOMS ,COMMUNITIES ,LATITUDE ,DISPERSAL (Ecology) - Abstract
Aim: Understanding the variation in community composition and species abundances (i.e., β‐diversity) is at the heart of community ecology. A common approach to examine β‐diversity is to evaluate directional variation in community composition by measuring the decay in the similarity among pairs of communities along spatial or environmental distance. We provide the first global synthesis of taxonomic and functional distance decay along spatial and environmental distance by analysing 148 datasets comprising different types of organisms and environments. Location: Global. Time period: 1990 to present. Major taxa studied: From diatoms to mammals. Method: We measured the strength of the decay using ranked Mantel tests (Mantel r) and the rate of distance decay as the slope of an exponential fit using generalized linear models. We used null models to test whether functional similarity decays faster or slower than expected given the taxonomic decay along the spatial and environmental distance. We also unveiled the factors driving the rate of decay across the datasets, including latitude, spatial extent, realm and organismal features. Results: Taxonomic distance decay was stronger than functional distance decay along both spatial and environmental distance. Functional distance decay was random given the taxonomic distance decay. The rate of taxonomic and functional spatial distance decay was fastest in the datasets from mid‐latitudes. Overall, datasets covering larger spatial extents showed a lower rate of decay along spatial distance but a higher rate of decay along environmental distance. Marine ecosystems had the slowest rate of decay along environmental distances. Main conclusions: In general, taxonomic distance decay is a useful tool for biogeographical research because it reflects dispersal‐related factors in addition to species responses to climatic and environmental variables. Moreover, functional distance decay might be a cost‐effective option for investigating community changes in heterogeneous environments. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
9. Phylogeny of Lantana, Lippia, and related genera (Lantaneae: Verbenaceae).
- Author
-
Lu‐Irving, Patricia, Bedoya, Ana M., Salimena, Fátima R. G., dos Santos Silva, Tânia R., Viccini, Lyderson F., Bitencourt, Cássia, Thode, Verônica A., Cardoso, Pedro H., O'Leary, Nataly, and Olmstead, Richard G.
- Subjects
LIPPIA (Genus) ,VERBENACEAE ,DNA sequencing ,PHYLOGENY ,DRIED fruit - Abstract
Premise: Lantana and Lippia (Verbenaceae) are two large Linnean genera whose classification has been based on associated fruit traits: fleshy vs. dry fruits and one vs. two seed‐bearing units. We reconstruct evolutionary relationships and the evolution of the two fruit traits to test the validity of these traits for classification. Methods: Previous studies of plastid DNA sequences provided limited resolution for this group. Consequently, seven nuclear loci, including ITS, ETS, and five PPR loci, were sequenced for 88 accessions of the Lantana/Lippia clade and three outgroups. Results: Neither Lantana nor Lippia is monophyletic. Burroughsia, Nashia, Phyla, and several Aloysia species are included within the clade comprising Lantana and Lippia. We provide a hypothesis for fruit evolution and biogeographic history in the group and their relevance for classification. Conclusions: Fleshy fruits evolved multiple times in the Lantana/Lippia clade and thus are not suitable taxonomic characters. Several sections of Lantana and Lippia and the small genera are monophyletic, but Lippia section Zappania is broadly paraphyletic, making circumscription of genera difficult. Lippia sect. Rhodolippia is a polyphyletic group characterized by convergence in showy bracts. Species of Lantana sect. Sarcolippia, previously transferred to Lippia, are not monophyletic. The clade originated and diversified in South America, with at least four expansions into both Central America and the Caribbean and two to Africa. The types species of Lantana and Lippia occur in small sister clades, rendering any taxonomy that retains either genus similar to its current circumscription impossible. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
10. Integrative taxonomic revision of the woodlouse-hunter spider genus Dysdera (Araneae: Dysderidae) in the Madeira archipelago with notes on its conservation status.
- Author
-
Crespo, Luís C, Silva, Isamberto, Enguídanos, Alba, Cardoso, Pedro, and Arnedo, Miquel A
- Subjects
WOLF spiders ,JUMPING spiders ,ARCHIPELAGOES ,COLONIZATION (Ecology) ,PHYLOGENY - Abstract
Dysdera is a highly speciose genus of mid-sized, nocturnal hunting spiders, mostly circumscribed to the Mediterranean. The genus managed to colonize all Macaronesian archipelagos, and underwent major diversification in the Canary Islands. Here, we report on an independent diversification event on the Madeira archipelago. Based on the integration of morphological and molecular evidence, we describe 8 new species to science, Dysdera dissimilis sp. nov. , Dysdera exigua sp. nov. , Dysdera isambertoi sp. nov. , Dysdera precaria sp. nov. , Dysdera recondita sp. nov. , Dysdera sandrae sp. nov. , Dysdera teixeirai sp. nov. , Dysdera titanica sp. nov. and redescribe Dysdera coiffaiti , Dysdera diversa and Dysdera portisancti. We synonymize Dysdera longibulbis and Dysdera vandeli under D. coiffaiti and D. diversa , respectively. Additionally, we use a multilocus target gene phylogeny to support a single colonization event of the archipelago followed by in situ diversification. We further discuss the discovered diversity patterns and their drivers. We conclude to that many of the species inhabit disturbed or fragile habitats and should be considered of high conservation concern. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
11. Standardised spider (Arachnida, Araneae) inventory of Kilpisjärvi, Finland.
- Author
-
Kiljunen, Niina, Pajunen, Timo, Fukushima, Caroline, Soukainen, Arttu, Kuurne, Jaakko, Korhonen, Tuuli, Saarinen, Joni, Falck, Ilari, Laine, Erkka, Mammola, Stefano, Urbano, Fernando, Macías-Hernández, Nuria, and Cardoso, Pedro
- Subjects
SPIDERS ,ARACHNIDA ,BIOGEOGRAPHY ,ECOLOGY - Abstract
Background: A spider taxonomy and ecology field course was organised in Kilpisjärvi Biological Station, northern Finland, in July 2019. During the course, four 50 × 50 m plots in mountain birch forest habitat were sampled following a standardised protocol. In addition to teaching and learning about spider identification, behaviour, ecology and sampling, the main aim of the course was to collect comparable data from the Kilpisjärvi area as part of a global project, with the purpose of uncovering global spider diversity patterns. New information: A total of 2613 spiders were collected, of which 892 (34%) were adults. Due to uncertainty of juvenile identification, only adults are included in the data presented in this paper. The observed adult spiders belong to 51 species, 40 genera and 11 families, of which the Linyphiidae were the most rich and abundant with 28 (55%) species and 461 (52%) individuals. Lycosidae had six species and 286 individuals, Gnaphosidae five species and 19 individuals, Thomisidae four species and 24 individuals, Theridiidae two species and 23 individuals. All other six families had one species and less than 40 individuals. The most abundant species were the linyphiid Agnyphantes expunctus (204) and the lycosids Pardosa eiseni (164) and Pardosa hyperborea (107). [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
12. A synthesis on cave‐dwelling spiders in Europe.
- Author
-
Mammola, Stefano, Cardoso, Pedro, Ribera, Carles, Pavlek, Martina, and Isaia, Marco
- Subjects
- *
SPIDER ecology , *SPIDERS , *UNDERGROUND ecology , *SPECIES distribution , *BIOGEOGRAPHY , *ANIMAL diversity - Abstract
Abstract: We provide the first overview on spiders living in subterranean habitats in Europe, including the first European subterranean spider checklist. In Europe, there are 486 spider species known to dwell in caves and other subterranean habitats, distributed across 22 families. Despite a few species being able to colonize caves across the whole continent, approximately 90% of the species show a restricted distribution, occurring exclusively in one or two countries. From a biogeographic perspective, southern Europe emerges as the main hot spot of subterranean spider diversity, showing the highest richness of endemic species. Compared to other temperate regions of the world, some families appear to be well represented and other poorly represented (or lacking) in European subterranean habitats. Overall, it appears that the taxonomical knowledge on subterranean spiders in Europe is sufficient, but not evenly distributed. As this checklist represents a useful baseline for advances in this field, we point out specific areas of interest for future research. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
13. A roadmap for island biology: 50 fundamental questions after 50 years of The Theory of Island Biogeography.
- Author
-
Patiño, Jairo, Whittaker, Robert J., Borges, Paulo A.V., Fernández‐Palacios, José María, Ah‐Peng, Claudine, Araújo, Miguel B., Ávila, Sergio P., Cardoso, Pedro, Cornuault, Josselin, Boer, Erik J., Nascimento, Lea, Gil, Artur, González‐Castro, Aarón, Gruner, Daniel S., Heleno, Ruben, Hortal, Joaquín, Illera, Juan Carlos, Kaiser‐Bunbury, Christopher N., Matthews, Thomas J., and Papadopoulou, Anna
- Subjects
BIODIVERSITY conservation ,BIOTIC communities ,GLOBAL environmental change ,BIOGEOGRAPHY ,MACROECOLOGY ,EQUILIBRIUM - Abstract
Aims The 50th anniversary of the publication of the seminal book, The Theory of Island Biogeography, by Robert H. MacArthur and Edward O. Wilson, is a timely moment to review and identify key research foci that could advance island biology. Here, we take a collaborative horizon-scanning approach to identify 50 fundamental questions for the continued development of the field. Location Worldwide. Methods We adapted a well-established methodology of horizon scanning to identify priority research questions in island biology, and initiated it during the Island Biology 2016 conference held in the Azores. A multidisciplinary working group prepared an initial pool of 187 questions. A series of online surveys was then used to refine a list of the 50 top priority questions. The final shortlist was restricted to questions with a broad conceptual scope, and which should be answerable through achievable research approaches. Results Questions were structured around four broad and partially overlapping island topics, including: (Macro)Ecology and Biogeography, (Macro)Evolution, Community Ecology, and Conservation and Management. These topics were then subdivided according to the following subject areas: global diversity patterns (five questions in total); island ontogeny and past climate change (4); island rules and syndromes (3); island biogeography theory (4); immigration-speciation-extinction dynamics (5); speciation and diversification (4); dispersal and colonization (3); community assembly (6); biotic interactions (2); global change (5); conservation and management policies (5); and invasive alien species (4). Main conclusions Collectively, this cross-disciplinary set of topics covering the 50 fundamental questions has the potential to stimulate and guide future research in island biology. By covering fields ranging from biogeography, community ecology and evolution to global change, this horizon scan may help to foster the formation of interdisciplinary research networks, enhancing joint efforts to better understand the past, present and future of island biotas. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
14. Processes underpinning fish species composition patterns in estuarine ecosystems worldwide.
- Author
-
Henriques, Sofia, Cardoso, Pedro, Cardoso, Inês, Laborde, Marina, Cabral, Henrique N., and Vasconcelos, Rita P.
- Subjects
- *
BIOGEOGRAPHY , *FISH communities , *ESTUARINE ecology , *ANIMAL dispersal , *HIERARCHICAL clustering (Cluster analysis) - Abstract
Aim We present the first global biogeographical regionalization of estuaries, assessing how dispersal limitation and/or environmental filtering mechanisms drive the patterns of fish assemblage composition among and within biogeographical regions. Location Estuaries worldwide. Methods A bootstrapped hierarchical cluster analysis was applied to define biogeographical regions based on pairwise beta diversity (βsim) of fish assemblages among 393 estuaries worldwide. Variables representing dispersal limitation and environmental features were used to disentangle the possible effects of assembly processes acting among and within biogeographical regions, through hierarchical partitioning of variation. Finally, we assessed the contribution of species to beta diversity through a method newly developed in this article. Results Estuaries were grouped into seven major biogeographical regions explained by geographical dispersal variables. Dissimilarity in species composition within each biogeographical region was mainly determined by ecosystem-connectivity dispersal variables, with a minor influence of environmental variables (chiefly sea surface temperature). Marine species contributed highly to beta diversity between estuaries but less than expected by chance, whilst freshwater species had low contributions yet also less than expected. Estuarine (i.e. brackish) and diadromous species had low contributions to beta diversity but higher than expected by chance. Main conclusions Fish assemblage composition in estuaries seems to be driven by dispersal limitation processes both among and within biogeographical regions, with only a minor role of environmental filtering evident within biogeographical regions. These findings contrast with the acknowledged importance of environmental variables as drivers of species richness patterns. Irrespective of biogeographical region, the ecosystem affinity of a species determined its contribution to beta diversity between estuaries. The new method presented here offers new opportunities for assessing the effects of taxonomic and functional aspects on beta diversity (βsim) across taxa and ecosystems, and thus contributes to improving knowledge of assembly processes. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
15. Biogeographical patterns of the genus Merodon Meigen, 1803 (Diptera: Syrphidae) in islands of the eastern Mediterranean and adjacent mainland.
- Author
-
Vujić, Ante, Petanidou, Theodora, Tscheulin, Thomas, Cardoso, Pedro, Radenković, Snežana, Ståhls, Gunilla, Baturan, Željana, Mijatović, Gorana, Rojo, Santos, Pérez‐Bañón, Celeste, Devalez, Jelle, Andrić, Andrijana, Jovičić, Snežana, Krašić, Dušanka, Markov, Zlata, Radišić, Dimitrije, Tataris, Giorgos, Dytham, Calvin, and Gilbert, Francis
- Subjects
SYRPHIDAE ,DIPTEROLOGY ,LANDFORMS ,DIPTERISTS ,FLIES - Abstract
The objective of this study was to obtain a biogeographical perspective on the hoverfly genus Merodon (Diptera, Syrphidae) based on data from 32 islands in the Aegean and Ionian archipelagoes vis-à-vis the adjacent mainland. In this part of the world, the genus comprises 57 species, out of more than 160 species described worldwide., The importance of eco-geographical variables (area, elevation, distance to the nearest island and distance to the nearest mainland) and the species-area relationship ( SAR) were studied in order to explain patterns of species richness. All tests supported the dynamic equilibrium concept., The area and distance to closest island were found to be the most important drivers of species richness on the Aegean and Ionian archipelagoes. Out of three SAR models evaluated in this study, the exponential function fitted our data best. It was found that a power model with no intercept value ( C = 1) performed even better by using symbolic regression for non-linear equation optimisation., The cluster and null-model analyses performed to detect inter-island similarities and origins of the insular Merodon fauna indicated a clear influence of colonisation history of the species on different islands., The results imply that the current distributions of Merodon species in the study area exhibit the combined effects of historical and present-day processes. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
16. Modeling directional spatio-temporal processes in island biogeography.
- Author
-
Carvalho, José C., Cardoso, Pedro, Rigal, François, Triantis, Kostas A., and Borges, Paulo A. V.
- Subjects
- *
BIOGEOGRAPHY , *ARCHIPELAGOES , *SPATIO-temporal variation , *ECOLOGICAL heterogeneity , *COMPARATIVE biology - Abstract
A key challenge in island biogeography is to quantity the role of dispersal in shaping biodiversity patterns among the islands of a given archipelago. Here, we propose such a framework. Dispersal within oceanic archipelagos may be conceptualized as a spatio-temporal process dependent on: (1) the spatial distribution of islands, because the probability of successful dispersal is inversely related to the spatial distance between islands and (2) the chronological sequence of island formation that determines the directional asymmetry of dispersal (hypothesized to be predominantly from older to younger islands). From these premises, directional network models may be constructed, representing putative connections among islands. These models may be translated to eigenfunctions in order to be incorporated into statistical analysis. The framework was tested with 12 datasets from the Hawaii, Azores, and Canaries. The explanatory power of directional network models for explaining species composition patterns, assessed by the Jaccard dissimilarity index, was compared with simpler time-isolation models. The amount of variation explained by the network models ranged from 5.5% (for Coleoptera in Hawaii) to 60.2% (for Pteridophytes in Canary Islands). In relation to the four studied taxa, the variation explained by network models was higher for Pteridophytes in the three archipelagos. By the contrary, small fractions of explained variation were observed for Coleoptera (5.5%) and Araneae (8.6%) in Hawaii. Time-isolation models were, in general, not statistical significant and explained less variation than the equivalent directional network models for all the datasets. Directional network models provide a way for evaluating the spatio-temporal signature of species dispersal. The method allows building scenarios against which hypotheses about dispersal within archipelagos may be tested. The new framework may help to uncover the pathways via which species have colonized the islands of a given archipelago and to understand the origins of insular biodiversity. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
17. Functional biogeography of oceanic islands and the scaling of functional diversity in the Azores.
- Author
-
Whittaker, Robert J., Rigal, François, Borges, Paulo A. V., Cardoso, Pedro, Terzopoulou, Sofia, Casanoves, Fernando, Pla, Laura, Guilhaumon, François, Ladle, Richard J., and Triantis, Kostas A.
- Subjects
BIODIVERSITY ,BIOGEOGRAPHY ,HABITATS ,BEETLES ,SPIDERS - Abstract
Analyses of species-diversity patterns of remote islands have been crucial to the development of biogeographic theory, yet little is known about corresponding patterns in functional traits on islands and how, for example, they may be affected by the introduction of exotic species. We collated trait data for spiders and beetles and used a functional diversity index (FRic) to test for nonrandomness in the contribution of endemic, other native (also combined as indigenous), and exotic species to functional-trait space across the nine islands of the Azores. In general, for both taxa and for each distributional category, functional diversity increases with species richness, which, in turn scales with island area. Null simulations support the hypothesis that each distributional group contributes to functional diversity in proportion to their species richness. Exotic spiders have added novel trait space to a greater degree than have exotic beetles, likely indicating greater impact of the reduction of immigration filters and/or differential historical losses of indigenous species. Analyses of species occurring in native-forest remnants provide limited indications of the operation of habitat filtering of exotics for three islands, but only for beetles. Although the general linear (not saturating) pattern of trait-space increase with richness of exotics suggests an ongoing process of functional enrichment and accommodation, further work is urgently needed to determine how estimates of extinction debt of indigenous species should be adjusted in the light of these findings. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
18. Measuring fractions of beta diversity and their relationships to nestedness: a theoretical and empirical comparison of novel approaches.
- Author
-
Carvalho, José C., Cardoso, Pedro, Borges, Paulo A. V., Schmera, Dénes, and Podani, János
- Subjects
- *
BIODIVERSITY , *EMPIRICAL research , *COMPARATIVE studies , *BIOGEOGRAPHY , *ECOLOGICAL research , *CONSERVATION biology , *SIMULATION methods & models - Abstract
Beta diversity and nestedness are central concepts of ecology and biogeography and evaluation of their relationships is in the focus of contemporary ecological and conservation research. Beta diversity patterns are originated from two distinct processes: the replacement (or turnover) of species and the loss (or gain) of species leading to richness differences. Nested distributional patterns are generally thought to have a component deriving from beta diversity which is independent of replacement processes. Quantification of these phenomena is often made by calculating a measure of beta diversity, and the resulting value being subsequently partitioned into a contribution by species replacement plus a fraction shared by beta diversity and nestedness. Three methods have been recently proposed for such partitioning, all of them based on pairwise comparisons of sites. In this paper, the performance of these methods was evaluated on theoretical grounds and tested by a simulation study in which different gradients of dissimilarity, with known degrees of species replacement and species loss, were created. Performance was also tested using empirical data addressing land-use induced changes in endemic arthropod communities of the Terceira Island in the Azores. We found that the partitioning of βcc (dissimilarity in terms of the Jaccard index) into two additive fractions, β-3 (dissimilarity due to species replacement) plus βrich (dissimilarity due to richness differences) reflects the species replacement and species loss processes across the simulated gradients in an ecologically and mathematically meaningful way, whilst the other two methods lack mathematical consistency and prove conceptually self-contradictory. Moreover, the first method identified a selective local extinction process for endemic arthropods, triggered by land-use changes, while the latter two methods overweighted the replacement component and led to false conclusions. Their basic flaw derives from the fact that the proposed replacement and nestedness components (deemed to account for species loss) are not scaled in the same way as the measure that accounts for the total dissimilarity (Sørensen and Jaccard indices). We therefore recommend the use of βcc=β-3+βrich, since its components are scaled in the same units and their responses are proportional to the replacement and the gain/loss of species. [ABSTRACT FROM AUTHOR]
- Published
- 2013
- Full Text
- View/download PDF
19. Integrating Landscape Disturbance and Indicator Species in Conservation Studies
- Author
-
Cardoso, Pedro, Rigal, François, Fattorini, Simone, Terzopoulou, Sofia, and Borges, Paulo A. V.
- Subjects
- *
STATISTICS , *CONSERVATION biology , *LAND use , *BIOTIC communities , *BIODIVERSITY , *POPULATION biology - Abstract
Successful conservation plans are conditioned by our ability to detect anthropogenic change in space and time and various statistical analyses have been developed to handle this critical issue. The main objective of this paper is to illustrate a new approach for spatial analysis in conservation biology. Here, we propose a two-step protocol. First, we introduce a new disturbance metric which provides a continuous measure of disturbance for any focal communities on the basis of the surrounding landscape matrix. Second, we use this new gradient to estimate species and community disturbance thresholds by implementing a recently developed method called Threshold Indicator Taxa ANalysis (TITAN). TITAN detects changes in species distributions along environmental gradients using indicators species analysis and assesses synchrony among species change points as evidence for community thresholds. We demonstrate our method with soil arthropod assemblages along a disturbance gradient in Terceira Island (Azores, Portugal). We show that our new disturbance metric realistically reflects disturbance patterns, especially in buffer zones (ecotones) between land use categories. By estimating species disturbance thresholds with TITAN along the disturbance gradient in Terceira, we show that species significantly associated with low disturbance differ from those associated with high disturbance in their biogeographical origin (endemics, non-endemic natives and exotics) and taxonomy (order). Finally, we suggest that mapping the disturbance community thresholds may reveal areas of primary interest for conservation, since these may host indigenous species sensitive to high disturbance levels. This new framework may be useful when: (1) both local and regional processes are to be reflected on single disturbance measures; (2) these are better quantified in a continuous gradient; (3) mapping disturbance of large regions using fine scales is necessary; (4) indicator species for disturbance are searched for and; (5) community thresholds are useful to understand the global dynamics of habitats. [ABSTRACT FROM AUTHOR]
- Published
- 2013
- Full Text
- View/download PDF
20. Patterns and Drivers of Taxonomic and Functional Change in Large Oceanic Island Bird Assemblages.
- Author
-
Soares, Filipa C., Lima, Ricardo F., Rodrigues, Ana S. L., Cardoso, Pedro, Matthews, Thomas J., and Palmeirim, Jorge M.
- Subjects
- *
WILDLIFE conservation , *ARCHIPELAGOES , *INTRODUCED species , *ISLANDS , *BIOGEOGRAPHY , *GEOLOGIC hot spots - Abstract
ABSTRACT Aim Location Time Period Major Taxa Studied Methods Results Main Conclusions We map global patterns of taxonomic and functional change between past (pre‐human impacts) and present (after anthropogenic extinctions and introductions) in large oceanic island bird assemblages and investigate if these patterns can be explained by island characteristics and anthropogenic factors.Sixty‐four oceanic islands (>100 km2).Late Holocene.Terrestrial and freshwater bird species.We compiled information on extinct, extant native and introduced bird species for all islands and used a probabilistic hypervolume approach to build a multi‐dimensional trait space and calculate several functional diversity metrics before and after extinctions and introductions. We identified which islands are global hotspots of human‐induced transformation by mapping multiple facets of biotic change and investigated intrinsic island characteristics and anthropogenic factors as drivers for these observed patterns.The Hawaiian and Mascarene islands stand out as hotspots of taxonomic and functional change, but all islands changed taxonomically and functionally, mostly gaining species but losing functional richness. Taxonomic and functional changes vary across islands but are often consistent within the same archipelago. Island isolation and surface can explain some of the observed variations, but anthropogenic factors, namely human occupation, also shaped both taxonomic and functional changes. Islands with higher human pressure, as well as larger islands with high elevation ranges, tended to have greater losses in functional richness.Most biodiversity change assessments are still largely based exclusively on taxonomic diversity, which is particularly worrying in the case of oceanic islands given that the magnitude of functional diversity change is often considerably larger. We call for comprehensive assessments of changes in both taxonomic and functional diversity across oceanic islands in order to better understand the drivers of these changes and, in turn, predict future trends. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
21. Using species abundance distribution models and diversity indices for biogeographical analyses.
- Author
-
Fattorini, Simone, Rigal, François, Cardoso, Pedro, and Borges, Paulo A.V.
- Subjects
- *
BIOGEOGRAPHY , *BIODIVERSITY , *COLONIZATION , *ARCHIPELAGOES - Abstract
We examine whether Species Abundance Distribution models (SADs) and diversity indices can describe how species colonization status influences species community assembly on oceanic islands. Our hypothesis is that, because of the lack of source-sink dynamics at the archipelago scale, Single Island Endemics (SIEs), i.e. endemic species restricted to only one island, should be represented by few rare species and consequently have abundance patterns that differ from those of more widespread species. To test our hypothesis, we used arthropod data from the Azorean archipelago (North Atlantic). We divided the species into three colonization categories: SIEs, archipelagic endemics (AZEs, present in at least two islands) and native non-endemics (NATs). For each category, we modelled rank-abundance plots using both the geometric series and the Gambin model, a measure of distributional amplitude. We also calculated Shannon entropy and Buzas and Gibson's evenness. We show that the slopes of the regression lines modelling SADs were significantly higher for SIEs, which indicates a relative predominance of a few highly abundant species and a lack of rare species, which also depresses diversity indices. This may be a consequence of two factors: (i) some forest specialist SIEs may be at advantage over other, less adapted species; (ii) the entire populations of SIEs are by definition concentrated on a single island, without possibility for inter-island source-sink dynamics; hence all populations must have a minimum number of individuals to survive natural, often unpredictable, fluctuations. These findings are supported by higher values of the α parameter of the Gambin mode for SIEs. In contrast, AZEs and NATs had lower regression slopes, lower α but higher diversity indices, resulting from their widespread distribution over several islands. We conclude that these differences in the SAD models and diversity indices demonstrate that the study of these metrics is useful for biogeographical purposes. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.