1. Development of an on-line SPR-digestion-nanoLC-MS/MS system for the quantification and identification of interferon-gamma in plasma.
- Author
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Stigter EC, de Jong GJ, and van Bennekom WP
- Subjects
- Biosensing Techniques instrumentation, Equipment Design, Equipment Failure Analysis, Humans, Reproducibility of Results, Sensitivity and Specificity, Systems Integration, Blood Chemical Analysis instrumentation, Chromatography, High Pressure Liquid instrumentation, Flow Injection Analysis instrumentation, Interferon-gamma blood, Mass Spectrometry instrumentation, Nanotechnology instrumentation, Surface Plasmon Resonance instrumentation
- Abstract
An automated, on-line system for protein quantification and identification, employing Surface Plasmon Resonance (SPR), enzymatic protein digestion, nanoLC and tandem-MS (MS/MS), has been developed. For the experiments recombinant human interferon-gamma (rhIFN-gamma) in buffer or diluted bovine plasma was used as a model protein. Upon injecting 90muL of a 1mugmL(-1) solution of rhIFN-gamma in diluted plasma at a flow rate of 10muLmin(-1), 320fmol of protein was reproducibly bound to the sensor surface. After desorption of the isolated protein from the SPR surface using 10mM glycine pH 1.3, on-line digestion, nanoLC and MS/MS analysis, rhIFN-gamma could be identified on basis of peptide masses and MS/MS fragmentation data. A sequence recovery of 66% was found when a pepsin micro reactor was used. For a trypsin micro reactor the sequence recovery was 50%. In the latter case, the desorbed protein solution was pH-tuned with a TRIS buffer for optimal enzyme activity. With the identified trypsin- and pepsin-produced peptides and because parts of their amino acid sequences overlap, the protein sequence can be largely elucidated showing the potential for the analysis of unknown proteins. The SPR-digestion-nanoLC-MS/MS platform provides unattended analysis of a sample within 60min.
- Published
- 2009
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