113 results on '"prostate cancer detection"'
Search Results
2. Targeted Prostate Biopsy: How, When, and Why? A Systematic Review.
- Author
-
Rebez, Giacomo, Barbiero, Maria, Simonato, Franco Alchiede, Claps, Francesco, Siracusano, Salvatore, Giaimo, Rosa, Tulone, Gabriele, Vianello, Fabio, Simonato, Alchiede, and Pavan, Nicola
- Subjects
- *
PROSTATE biopsy , *ENDORECTAL ultrasonography , *MAGNETIC resonance imaging , *CANCER diagnosis , *TECHNOLOGICAL innovations , *PROSTATE cancer - Abstract
Objective: Prostate cancer, the second most diagnosed cancer among men, requires precise diagnostic techniques to ensure effective treatment. This review explores the technological advancements, optimal application conditions, and benefits of targeted prostate biopsies facilitated by multiparametric magnetic resonance imaging (mpMRI). Methods: A systematic literature review was conducted to compare traditional 12-core systematic biopsies guided by transrectal ultrasound with targeted biopsy techniques using mpMRI. We searched electronic databases including PubMed, Scopus, and Web of Science from January 2015 to December 2024 using keywords such as "targeted prostate biopsy", "fusion prostate biopsy", "cognitive prostate biopsy", "MRI-guided biopsy", and "transrectal ultrasound prostate biopsy". Studies comparing various biopsy methods were included, and data extraction focused on study characteristics, patient demographics, biopsy techniques, diagnostic outcomes, and complications. Conclusion: mpMRI-guided targeted biopsies enhance the detection of clinically significant prostate cancer while reducing unnecessary biopsies and the detection of insignificant cancers. These targeted approaches preserve or improve diagnostic accuracy and patient outcomes, minimizing the risks associated with overdiagnosis and overtreatment. By utilizing mpMRI, targeted biopsies allow for precise targeting of suspicious regions within the prostate, providing a cost-effective method that reduces the number of biopsies performed. This review highlights the importance of integrating advanced imaging techniques into prostate cancer diagnosis to improve patient outcomes and quality of life. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
3. Advances in Photoacoustic Endoscopic Imaging Technology for Prostate Cancer Detection.
- Author
-
Wei, Ningning, Chen, Huiting, Li, Bin, Dong, Xiaojun, and Wang, Bo
- Subjects
IMAGE reconstruction algorithms ,ACOUSTIC imaging ,TECHNOLOGICAL innovations ,EARLY detection of cancer ,PROSTATE cancer - Abstract
The rapid progress in biomedical imaging technology has generated considerable interest in new non-invasive photoacoustic endoscopy imaging techniques. This emerging technology offers significant benefits, including high spectral specificity, strong tissue penetration, and real-time multidimensional high-resolution imaging capabilities, which enhance clinical diagnosis and treatment of prostate cancer. This paper delivers a thorough review of current prostate cancer screening techniques, the core principles of photoacoustic endoscopy imaging, and the latest research on its use in detecting prostate cancer. Additionally, the limitations of this technology in prostate cancer detection are discussed, and future development trends are anticipated. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
4. Improved prostate cancer diagnosis using a modified ResNet50-based deep learning architecture
- Author
-
Talaat, Fatma M., El-Sappagh, Shaker, Alnowaiser, Khaled, and Hassan, Esraa
- Published
- 2024
- Full Text
- View/download PDF
5. Variability in prostate cancer detection among radiologists and urologists using MRI fusion biopsy
- Author
-
Hiten D. Patel, Whitney R. Halgrimson, Sarah E. Sweigert, Steven M. Shea, Thomas M. T. Turk, Marcus L. Quek, Alex Gorbonos, Robert C. Flanigan, Ari Goldberg, and Gopal N. Gupta
- Subjects
magnetic resonance imaging ,practice variation ,prostate biopsy ,prostate cancer ,prostate cancer detection ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Abstract Objectives The aim of this study is to evaluate the impact of radiologist and urologist variability on detection of prostate cancer (PCa) and clinically significant prostate cancer (csPCa) with magnetic resonance imaging (MRI)‐transrectal ultrasound (TRUS) fusion prostate biopsies. Patients and methods The Prospective Loyola University MRI (PLUM) Prostate Biopsy Cohort (January 2015 to December 2020) was used to identify men receiving their first MRI and MRI/TRUS fusion biopsy for suspected PCa. Clinical, MRI and biopsy data were stratified by radiologist and urologist to evaluate variation in Prostate Imaging‐Reporting and Data System (PI‐RADS) grading, lesion number and cancer detection. Multivariable logistic regression (MVR) models and area under the curve (AUC) comparisons assessed the relative impact of individual radiologists and urologists. Results A total of 865 patients (469 biopsy‐naïve) were included across 5 urologists and 10 radiologists. Radiologists varied with grading 15.4% to 44.8% of patients with MRI lesions as PI‐RADS 3. PCa detection varied significantly by radiologist, from 34.5% to 66.7% (p = 0.003) for PCa and 17.2% to 50% (p = 0.001) for csPCa. Urologists' PCa diagnosis rates varied between 29.2% and 55.8% (p = 0.013) and between 24.6% and 39.8% (p = 0.36) for csPCa. After adjustment for case‐mix on MVR, a fourfold to fivefold difference in PCa detection was observed between the highest‐performing and lowest‐performing radiologist (OR 0.22, 95%CI 0.10–0.47, p
- Published
- 2024
- Full Text
- View/download PDF
6. Advances in Photoacoustic Endoscopic Imaging Technology for Prostate Cancer Detection
- Author
-
Ningning Wei, Huiting Chen, Bin Li, Xiaojun Dong, and Bo Wang
- Subjects
photoacoustic endoscopic imaging ,prostate cancer detection ,image reconstruction algorithms ,Applied optics. Photonics ,TA1501-1820 - Abstract
The rapid progress in biomedical imaging technology has generated considerable interest in new non-invasive photoacoustic endoscopy imaging techniques. This emerging technology offers significant benefits, including high spectral specificity, strong tissue penetration, and real-time multidimensional high-resolution imaging capabilities, which enhance clinical diagnosis and treatment of prostate cancer. This paper delivers a thorough review of current prostate cancer screening techniques, the core principles of photoacoustic endoscopy imaging, and the latest research on its use in detecting prostate cancer. Additionally, the limitations of this technology in prostate cancer detection are discussed, and future development trends are anticipated.
- Published
- 2024
- Full Text
- View/download PDF
7. Current Approach to Complications and Difficulties during Transrectal Ultrasound-Guided Prostate Biopsies.
- Author
-
Osama, Salloum, Serboiu, Crenguta, Taciuc, Iulian-Alexandru, Angelescu, Emil, Petcu, Costin, Priporeanu, Tiberiu Alexandru, Marinescu, Andreea, and Costache, Adrian
- Subjects
- *
DIGITAL rectal examination , *PROSTATE cancer , *PROSTATE biopsy , *MIDDLE-aged men , *PROSTATE-specific antigen , *EARLY detection of cancer , *CANCER-related mortality - Abstract
Prostate cancer is one of the most common male malignancies worldwide. It affects middle-aged men (45–60 years) and is the leading cause of cancer-related mortality in Western countries. The TRUS (trans rectal ultrasound)-guided prostate biopsy has been a standard procedure in prostate cancer detection for more than thirty years, and it is recommended in male patients with an abnormal PSA (prostate-specific antigens) or abnormalities found during digital rectal examinations. During this procedure, urologists might encounter difficulties which may cause subsequent complications. This manuscript aims to present both the complications and the technical difficulties that may occur during TRUS-guided prostate biopsy, along with resolutions and solutions found in the specialized literature. The conclusions of this manuscript will note that the TRUS-guided prostate biopsy remains a solid, cost-efficient, and safe procedure with which to diagnose prostate cancer. The complications are usually self-limiting and do not require additional medical assistance. The difficulties posed by the procedure can be safely overcome if there are no other available alternatives. Open communication with the patients improves both pre- and post-procedure compliance. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
8. Voxel‐level Classification of Prostate Cancer on Magnetic Resonance Imaging: Improving Accuracy Using Four‐Compartment Restriction Spectrum Imaging
- Author
-
Feng, Christine H, Conlin, Christopher C, Batra, Kanha, Rodríguez‐Soto, Ana E, Karunamuni, Roshan, Simon, Aaron, Kuperman, Joshua, Rakow‐Penner, Rebecca, Hahn, Michael E, Dale, Anders M, and Seibert, Tyler M
- Subjects
Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Clinical Research ,Prostate Cancer ,Biomedical Imaging ,Aging ,Urologic Diseases ,Cancer ,4.2 Evaluation of markers and technologies ,Diffusion Magnetic Resonance Imaging ,Humans ,Magnetic Resonance Imaging ,Magnetic Resonance Spectroscopy ,Male ,Prostatic Neoplasms ,ROC Curve ,Retrospective Studies ,prostate cancer ,diffusion magnetic resonance imaging ,restriction spectrum imaging ,prostate cancer detection ,Physical Sciences ,Engineering ,Medical and Health Sciences ,Nuclear Medicine & Medical Imaging ,Clinical sciences - Abstract
BackgroundDiffusion magnetic resonance imaging (MRI) is integral to detection of prostate cancer (PCa), but conventional apparent diffusion coefficient (ADC) cannot capture the complexity of prostate tissues and tends to yield noisy images that do not distinctly highlight cancer. A four-compartment restriction spectrum imaging (RSI4 ) model was recently found to optimally characterize pelvic diffusion signals, and the model coefficient for the slowest diffusion compartment, RSI4 -C1 , yielded greatest tumor conspicuity.PurposeTo evaluate the slowest diffusion compartment of a four-compartment spectrum imaging model (RSI4 -C1 ) as a quantitative voxel-level classifier of PCa.Study typeRetrospective.SubjectsForty-six men who underwent an extended MRI acquisition protocol for suspected PCa. Twenty-three men had benign prostates, and the other 23 men had PCa.Field strength/sequenceA 3 T, multishell diffusion-weighted and axial T2-weighted sequences.AssessmentHigh-confidence cancer voxels were delineated by expert consensus, using imaging data and biopsy results. The entire prostate was considered benign in patients with no detectable cancer. Diffusion images were used to calculate RSI4 -C1 and conventional ADC. Classifier images were also generated.Statistical testsVoxel-level discrimination of PCa from benign prostate tissue was assessed via receiver operating characteristic (ROC) curves generated by bootstrapping with patient-level case resampling. RSI4 -C1 was compared to conventional ADC for two metrics: area under the ROC curve (AUC) and false-positive rate for a sensitivity of 90% (FPR90 ). Statistical significance was assessed using bootstrap difference with two-sided α = 0.05.ResultsRSI4 -C1 outperformed conventional ADC, with greater AUC (mean 0.977 [95% CI: 0.951-0.991] vs. 0.922 [0.878-0.948]) and lower FPR90 (0.032 [0.009-0.082] vs. 0.201 [0.132-0.290]). These improvements were statistically significant (P
- Published
- 2021
9. Comparative analysis of minimally invasive methods of treatment of localized prostate cancer
- Author
-
D. V. Chinenov, E. V. Shpot, Ya. N. Chernov, Z. K. Tsukkiev, A. Yu. Votyakov, A. A. Kurbanov, H. M. Ismailov, Yu. V. Lerner, and L. M. Rapoport
- Subjects
brachytherapy ,cryoablation ,high-intensity focused ultrasound therapy ,prostate cancer detection ,Surgery ,RD1-811 ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
The purpose of this work is to study the functional and oncological results of minimally invasive methods in patients with verified prostate cancer.Materials and methods. In our study, 160 patients with identified prostate cancer were presented, treatment was carried out with minimally invasive methods (methods of cryoablation (n = 53), brachytherapy (n = 52) and HIFU therapy (n = 55)). A qualitative assessment of the oncological outcome revealed high levels of prostate-specific antigen (PSA) and the results of repeated transrectal prostate biopsies. The evaluation of functional indicators and quality of life was carried out according to the results of the IIEF-5 (International Index of Erectile Function), IPSS (International Prostate Symptom Score), QoL (Quality of Life), Qmax (maximum urination rate of function).Results. The results of oncological control according to the data of positive repeated biopsies were worse in patients after cryoablation (7.54 %), the best indicators of oncological results were observed in patients after brachytherapy. Looking at the IPSS results, it is possible to detect statistical signs of higher scores in the brachytherapy group when various signs are found in the postoperative period, however, these differences do not reach statistical signs in the late period in patients of group brachytherapy and cryoablation. Patients of the cryoablation group showed higher levels of the IIEF-5 in the postoperative period, in the late period of observation of erectile function in patients of the cryoablation group, the statistical data did not differ from those in patients after brachytherapy. Patients after HIFU therapy showed a decrease in de novo erectile dysfunction over a 3-year follow-up period, above average IIEF5 scores, below IPSS scores, and better QoL results.Conclusion. Long-term oncological results are, in general, revisions, however, the recurrence rate is slightly higher in patients after cryoablation. Prostate cancer recurrence was detected in patients of the ISUP 3 group. In patients after HIFU therapy, the quality of urination is higher than in patients of other groups, which can be associated with the laser enucleation of prostate hyperplasia performed by him. The advantage in patients after HIFU therapy was observed in the detection of IIEF-5, thus HIFU therapy had a better effect on the quality of life of patients with pathological prostate cancer.
- Published
- 2022
- Full Text
- View/download PDF
10. Urinary Zinc Loss Identifies Prostate Cancer Patients.
- Author
-
Maddalone, Maria Grazia, Oderda, Marco, Mengozzi, Giulio, Gesmundo, Iacopo, Novelli, Francesco, Giovarelli, Mirella, Gontero, Paolo, and Occhipinti, Sergio
- Subjects
- *
ZINC analysis , *DISEASE progression , *AGE distribution , *EARLY detection of cancer , *CANCER patients , *OVERDIAGNOSIS , *PROSTATE-specific antigen , *PROSTATE tumors , *DIGITAL rectal examination - Abstract
Simple Summary: Prostate cancer is known to lose the capability to absorb and secrete zinc compared to normal prostate tissue, suggesting that the evaluation of zinc in prostate secretion can be a tool to identify the risk of developing cancer. In our study, we observed that the average amount of zinc detectable in urine after a prostatic massage is lower in patients with prostate cancer than in healthy subjects. Moreover, there is an inverse correlation between the concentration of urinary zinc and the tumor stage. This evidence suggests that the evaluation of urinary zinc may be a parameter for better diagnosis and prognosis of prostate cancer. Prostate Cancer (PCa) is one of the most common malignancies in men worldwide, with 1.4 million diagnoses and 310,000 deaths in 2020. Currently, there is an intense debate regarding the serum prostatic specific antigen (PSA) test as a diagnostic tool in PCa due to the lack of specificity and high prevalence of over-diagnosis and over-treatments. One of the most consistent characteristics of PCa is the marked decrease in zinc; hence the lost ability to accumulate and secrete zinc represents a potential parameter for early detection of the disease. We quantified zinc levels in urine samples collected after a standardized prostatic massage from 633 male subjects that received an indication for prostate biopsy from 2015 and 2019 at AOU Città della Salute e della Scienza di Torino Hospital. We observed that the mean zinc levels were lower in the urine of cancer patients than in healthy subjects, with a decreasing trend in correlation with the progression of the disease. The combination of zinc with standard parameters, such as PSA, age, digital rectal exploration results, and magnetic resonance findings, displayed high diagnostic performance. These results suggest that urinary zinc may represent an early and non-invasive diagnostic biomarker for prostate cancer. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
11. Combining targeted and systematic prostate biopsy improves prostate cancer detection and correlation with the whole mount histopathology in biopsy naïve and previous negative biopsy patients
- Author
-
Johannes Mischinger, Helmut Schöllnast, Hanna Zurl, Mark Geyer, Katja Fischereder, Gabriel Adelsmayr, Jasminka Igrec, Gerald Fritz, Martina Merdzo-Hörmann, Jörg Elstner, Johannes Schmid, Alfred Triebl, Viktoria Trimmel, Clemens Reiter, Jakob Steiner, Dominik Rosenlechner, Maximilian Seles, Georg P. Pichler, Martin Pichler, Jakob Riedl, Stephanie Schöpfer-Schwab, Jakob Strobl, Georg C. Hutterer, Richard Zigeuner, Karl Pummer, Herbert Augustin, Sascha Ahyai, Sebastian Mannweiler, Michael Fuchsjäger, and Emina Talakic
- Subjects
prostate cancer detection ,PI-RADS-Version-2 ,combination of fusion and systematic biopsy ,uroNav ,biopsy-naïve ,previous-negative biopsy ,Surgery ,RD1-811 - Abstract
ObjectiveGuidelines for previous negative biopsy (PNB) cohorts with a suspicion of prostate cancer (PCa) after positive multiparametric (mp) magnetic-resonance-imaging (MRI) often favour the fusion-guided targeted prostate-biopsy (TB) only approach for Prostate Imaging-Reporting and Data System (PI-RADS) ≥3 lesions. However, recommendations lack direct biopsy performance comparison within biopsy naïve (BN) vs. PNB patients and its prognostication of the whole mount pathology report (WMPR), respectively. We suppose, that the combination of TB and concomitant TRUS-systematic biopsy (SB) improves the PCa detection rate of PI-RADS 2, 3, 4 or 5 lesions and the International Society of Urological Pathology (ISUP)-grade predictability of the WMPR in BN- and PNB patients.MethodsPatients with suspicious mpMRI, elevated prostate-specific-antigen and/or abnormal digital rectal examination were included. All PI-RADS reports were intramurally reviewed for biopsy planning. We compared the PI-RADS score substratified TB, SB or combined approach (TB/SB) associated BN- and PNB-PCa detection rate. Furthermore, we assessed the ISUP-grade variability between biopsy cores and the WMPR.ResultsAccording to BN (n = 499) vs. PNB (n = 314) patients, clinically significant (cs) PCa was detected more frequently by the TB/SB approach (62 vs. 43%) than with the TB (54 vs. 34%) or SB (57 vs. 34%) (all p
- Published
- 2022
- Full Text
- View/download PDF
12. ProCDet: A New Method for Prostate Cancer Detection Based on MR Images
- Author
-
Yuejing Qian, Zengyou Zhang, and Bo Wang
- Subjects
Prostate cancer detection ,MR image ,image registration ,self-supervised learning ,prostate segmentation ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Prostate cancer is a malignant tumor that occurs in the male prostate. Prostate cancer lesions have the characteristics of small size and blurry outline, which is a challenge to design a robust prostate cancer detection method. At present, clinical diagnosis of prostate cancer is mainly based on magnetic resonance (MR) imaging. However, it is difficult to obtain prostate cancer data, and the data with true values is also very limited, which further increases the difficulty of prostate cancer detection methods based on MR images. To solve these problems, this paper designs a new method of prostate cancer detection based on MR images, which is recorded as ProCDet. The method consists of three modules: registration of prostate MR images, segmentation of prostate, and segmentation of prostate cancer lesions. First, the registration between different sequences of MR images is performed to find the spatial relationship between the different sequences. Then, the designed prostate segmentation network based on the attention mechanism is used to segment the prostate to remove the interference of background information. Finally, a 3D prostate cancer lesion segmentation network based on Focal Tversky Loss is applied to determine the specific location of prostate cancer. Moreover, in order to take full advantage of unlabeled prostate data, this paper designs a self-supervised learning method to improve the accuracy of prostate cancer detection. The proposed ProCDet has been experimentally verified on the ProstateX dataset. When the average number of false-positive lesions per patient is 0.6275, the true-positive rate is 91.82%. Experimental results show that the ProCDet can obtain competitive detection performance.
- Published
- 2021
- Full Text
- View/download PDF
13. Evaluation of the Differences between Normal and Cancerous Prostate Tissue Response to Simple and Vibro-Neural Stimulation
- Author
-
Samir Zein, Farhad Tabatabai Ghomsheh, and Hasan Jamshidian
- Subjects
prostate cancer detection ,neural stimulation ,energy dissipation ,prostate tissue ,residual displacement ,Medicine - Abstract
Background: Early detection of prostate cancer has significant benefits for its treatment and can increase the survival chance in patients. In recent years, new methods such as shear wave elastography and vibro-elastography, as well as artificial tactile sensing, have been used to detect a mass in the prostate tissue in-vivo and ex-vivo. This paper aims to investigate the difference between normal and malignant prostate tissue reaction to simple and vibro-neural stimulation for prostate tissue mass detection in order to determine neural stimulation intensity, velocity, and frequency to obtain the best result in detecting the type and location of the tumor. Methods: This study has utilized neural stimulation devices in normal and cancerous tissues. The stimulation velocity, probe location, and the frequency of neural stimulation considered as the independent variables. Results: The results show that for superficial masses, although dependent on the probe, the accuracy of detection at the low speed of 5mm/s is 50% higher than other conditions. On the other hand, in deep masses, with increasing mass depth, the accuracy of detection at the medium speed of 8mm/s is 30% higher than the low speed. Finally, the results showed that with increased stimulation frequency, the possibility of tumor detection, and its accuracy increases by 35%. Conclusion: By improving the accuracy of the neural stimulation device, it can apply to detect hard materials such as tumors and malignant tissues.
- Published
- 2020
- Full Text
- View/download PDF
14. Deep Learning-based Unsupervised Domain Adaptation via a Unified Model for Prostate Lesion Detection Using Multisite Biparametric MRI Datasets.
- Author
-
Li H, Liu H, von Busch H, Grimm R, Huisman H, Tong A, Winkel D, Penzkofer T, Shabunin I, Choi MH, Yang Q, Szolar D, Shea S, Coakley F, Harisinghani M, Oguz I, Comaniciu D, Kamen A, and Lou B
- Subjects
- Humans, Male, Retrospective Studies, Middle Aged, Aged, Image Interpretation, Computer-Assisted methods, Multiparametric Magnetic Resonance Imaging methods, Diffusion Magnetic Resonance Imaging methods, Prostate diagnostic imaging, Prostate pathology, Magnetic Resonance Imaging methods, Prostatic Neoplasms diagnostic imaging, Prostatic Neoplasms pathology, Deep Learning
- Abstract
Purpose To determine whether the unsupervised domain adaptation (UDA) method with generated images improves the performance of a supervised learning (SL) model for prostate cancer (PCa) detection using multisite biparametric (bp) MRI datasets. Materials and Methods This retrospective study included data from 5150 patients (14 191 samples) collected across nine different imaging centers. A novel UDA method using a unified generative model was developed for PCa detection using multisite bpMRI datasets. This method translates diffusion-weighted imaging (DWI) acquisitions, including apparent diffusion coefficient (ADC) and individual diffusion-weighted (DW) images acquired using various b values, to align with the style of images acquired using b values recommended by Prostate Imaging Reporting and Data System (PI-RADS) guidelines. The generated ADC and DW images replace the original images for PCa detection. An independent set of 1692 test cases (2393 samples) was used for evaluation. The area under the receiver operating characteristic curve (AUC) was used as the primary metric, and statistical analysis was performed via bootstrapping. Results For all test cases, the AUC values for baseline SL and UDA methods were 0.73 and 0.79 ( P < .001), respectively, for PCa lesions with PI-RADS score of 3 or greater and 0.77 and 0.80 ( P < .001) for lesions with PI-RADS scores of 4 or greater. In the 361 test cases under the most unfavorable image acquisition setting, the AUC values for baseline SL and UDA were 0.49 and 0.76 ( P < .001) for lesions with PI-RADS scores of 3 or greater and 0.50 and 0.77 ( P < .001) for lesions with PI-RADS scores of 4 or greater. Conclusion UDA with generated images improved the performance of SL methods in PCa lesion detection across multisite datasets with various b values, especially for images acquired with significant deviations from the PI-RADS-recommended DWI protocol (eg, with an extremely high b value). Keywords: Prostate Cancer Detection, Multisite, Unsupervised Domain Adaptation, Diffusion-weighted Imaging, b Value Supplemental material is available for this article. © RSNA, 2024.
- Published
- 2024
- Full Text
- View/download PDF
15. A new predictor is comparable to the updated nomogram in predicting the intermediate- and high-risk prostate cancer but outperforms nomogram in reducing the overtreatment for the low-risk Pca
- Author
-
Wang H, Tai S, Zhang L, Zhou J, and Liang C
- Subjects
age ,PSA ,PSA density ,prostate cancer detection ,PI-RADS ,Nomogram ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Hui Wang,1–3 Sheng Tai,1,2 Li Zhang,1,3 Jun Zhou,1–3 Chaozhao Liang1–31Department of Urology, The First Affiliated Hospital of Anhui Medical University, Hefei, People’s Republic of China; 2Anhui Province Key Laboratory of Genitourinary Diseases, Anhui Medical University, Hefei, People’s Republic of China; 3The Institute of Urology, Anhui Medical University, Hefei, People’s Republic of ChinaPurposes: To develop a new predictor and update nomogram based on prostate imaging reporting and data system version 2 (PI-RADS V2) in predicting intermediate- and high-risk prostate cancer (IH-Pca) and reducing the overtreatment for low-risk Pca (L-Pca).Methods: All men that underwent trans-rectal ultrasound-guided 12+X-core prostate biopsy between January 2015 and June 2018 were collected and analyzed. The significant risks (SRs) of Pca were selected by univariate and multivariate analysis. All SRs were divided into four groups (0 to 3 points) based on the probability of PI-RADS. Each patient can obtain a total score (TS). The updated nomogram was established by R package version 3.0. The area under the curve (AUC), net reclassification index (NRI), calibration curves and decision curves were used to evaluate the diagnostic performance.Results: There were 1,078 patients, including 640 (59%) men with normal or L-Pca (N-LPca) and 438 (41%) men with IH-Pca. The scores of TS for IH-Pca and N-LPca were 16.13±3.11 and 10.52±3.32, respectively (P
- Published
- 2019
16. A Comprehensive Study of Data Augmentation Strategies for Prostate Cancer Detection in Diffusion-Weighted MRI Using Convolutional Neural Networks.
- Author
-
Hao, Ruqian, Namdar, Khashayar, Liu, Lin, Haider, Masoom A., and Khalvati, Farzad
- Subjects
DIGITAL image processing ,DEEP learning ,MAGNETIC resonance imaging ,CANCER patients ,DESCRIPTIVE statistics ,COMPUTER-aided diagnosis ,ARTIFICIAL neural networks ,RECEIVER operating characteristic curves ,PROSTATE tumors ,ALGORITHMS - Abstract
Data augmentation refers to a group of techniques whose goal is to battle limited amount of available data to improve model generalization and push sample distribution toward the true distribution. While different augmentation strategies and their combinations have been investigated for various computer vision tasks in the context of deep learning, a specific work in the domain of medical imaging is rare and to the best of our knowledge, there has been no dedicated work on exploring the effects of various augmentation methods on the performance of deep learning models in prostate cancer detection. In this work, we have statically applied five most frequently used augmentation techniques (random rotation, horizontal flip, vertical flip, random crop, and translation) to prostate diffusion-weighted magnetic resonance imaging training dataset of 217 patients separately and evaluated the effect of each method on the accuracy of prostate cancer detection. The augmentation algorithms were applied independently to each data channel and a shallow as well as a deep convolutional neural network (CNN) was trained on the five augmented sets separately. We used area under receiver operating characteristic (ROC) curve (AUC) to evaluate the performance of the trained CNNs on a separate test set of 95 patients, using a validation set of 102 patients for finetuning. The shallow network outperformed the deep network with the best 2D slice-based AUC of 0.85 obtained by the rotation method. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
17. Deep learning in prostate cancer diagnosis and Gleason grading in histopathology images: An extensive study
- Author
-
Ali Hasan Md. Linkon, Md. Mahir Labib, Tarik Hasan, Mozammal Hossain, and Marium-E- Jannat
- Subjects
Deep learning ,Convolutional neural network ,Computer-aided detection ,Medical imaging ,Prostate cancer detection ,Gleason grading ,Computer applications to medicine. Medical informatics ,R858-859.7 - Abstract
Among American men, prostate cancer is the cause of the second-highest death by any cancer. It is also the most common cancer in men worldwide, and the annual numbers are quite alarming. The most prognostic marker for prostate cancer is the Gleason grading system on histopathology images. Pathologists determine the Gleason grade on stained tissue specimens of Hematoxylin and Eosin (H&E) based on tumor structural growth patterns from whole slide images. Recent advances in Computer-Aided Detection (CAD) using deep learning have brought the immense scope of automatic detection and recognition at very high accuracy in prostate cancer like other medical diagnoses and prognoses. Automated deep learning systems have delivered promising results from histopathological images to accurate grading of prostate cancer. Many studies have shown that deep learning strategies can achieve better outcomes than simpler systems that make use of pathology samples. This article aims to provide an insight into the gradual evolution of deep learning in detecting prostate cancer and Gleason grading. This article also evaluates a comprehensive, synthesized overview of the current state and existing methodological approaches as well as unique insights in prostate cancer detection using deep learning. We have also described research findings, current limitations, and future avenues for research. We have tried to make this paper applicable to deep learning communities and hope it will encourage new collaborations to create dedicated applications and improvements for prostate cancer detection and Gleason grading.
- Published
- 2021
- Full Text
- View/download PDF
18. Least squares support vector machines with fast leave-one-out AUC optimization on imbalanced prostate cancer data.
- Author
-
Wang, Guanjin, Teoh, Jeremy Yuen-Chun, Lu, Jie, and Choi, Kup-Sze
- Abstract
Quite often, the available pre-biopsy data for early prostate cancer detection are imbalanced. When the least squares support vector machines (LS-SVMs) are applied to such scenarios, it becomes naturally desirable for us to introduce the well-known AUC performance index into the LS-SVMs framework to avoid bias towards majority classes. However, this may result in high computational complexity for the minimal leave-one-out error. In this paper, by introducing the parameter λ , a generalized Area under the ROC curve (AUC) performance index R AUCLS is developed to theoretically guarantee that R AUCLS linearly depends on the classical AUC performance index R AUC . Based on both R AUCLS and the classical LS-SVM, a new AUC-based least squares support vector machine called AUC-LS-SVMs is proposed for directly and effectively classifying imbalanced prostate cancer data. The distinctive advantage of the proposed classifier AUC-LS-SVMs exists in that it can achieve the minimal leave-one-out error by quickly optimizing the parameter λ in R AUCLS using the proposed fast leave-one-out cross validation (LOOCV) strategy. The proposed classifier is first evaluated using generic public datasets. Further experiments are then conducted on a real-world prostate cancer dataset to demonstrate the efficacy of our proposed classifier for early prostate cancer detection. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
19. A Hybrid End-to-End Approach Integrating Conditional Random Fields into CNNs for Prostate Cancer Detection on MRI.
- Author
-
Lapa, Paulo, Castelli, Mauro, Gonçalves, Ivo, Sala, Evis, and Rundo, Leonardo
- Subjects
ARTIFICIAL neural networks ,PROSTATE cancer ,CONDITIONAL random fields ,RECURRENT neural networks ,MARKOV random fields ,ENDORECTAL ultrasonography ,MAGNETIC resonance imaging ,FEATURE extraction - Abstract
Featured Application: Integration of Conditional Random Fields into Convolutional Neural Networks as a hybrid end-to-end approach for prostate cancer detection on non-contrast-enhanced Magnetic Resonance Imaging. Prostate Cancer (PCa) is the most common oncological disease in Western men. Even though a growing effort has been carried out by the scientific community in recent years, accurate and reliable automated PCa detection methods on multiparametric Magnetic Resonance Imaging (mpMRI) are still a compelling issue. In this work, a Deep Neural Network architecture is developed for the task of classifying clinically significant PCa on non-contrast-enhanced MR images. In particular, we propose the use of Conditional Random Fields as a Recurrent Neural Network (CRF-RNN) to enhance the classification performance of XmasNet, a Convolutional Neural Network (CNN) architecture specifically tailored to the PROSTATEx17 Challenge. The devised approach builds a hybrid end-to-end trainable network, CRF-XmasNet, composed of an initial CNN component performing feature extraction and a CRF-based probabilistic graphical model component for structured prediction, without the need for two separate training procedures. Experimental results show the suitability of this method in terms of classification accuracy and training time, even though the high-variability of the observed results must be reduced before transferring the resulting architecture to a clinical environment. Interestingly, the use of CRFs as a separate postprocessing method achieves significantly lower performance with respect to the proposed hybrid end-to-end approach. The proposed hybrid end-to-end CRF-RNN approach yields excellent peak performance for all the CNN architectures taken into account, but it shows a high-variability, thus requiring future investigation on the integration of CRFs into a CNN. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
20. Stacking-based ensemble learning of decision trees for interpretable prostate cancer detection.
- Author
-
Wang, Yuyan, Wang, Dujuan, Geng, Na, Wang, Yanzhang, Yin, Yunqiang, and Jin, Yaochu
- Subjects
RANDOM forest algorithms ,DECISION trees ,PROSTATE cancer ,EARLY detection of cancer ,DATA mining ,DIAGNOSIS methods - Abstract
Abstract Prostate cancer is a highly incident malignant cancer among men. Early detection of prostate cancer is necessary for deciding whether a patient should receive costly and invasive biopsy with possible serious complications. However, existing cancer diagnosis methods based on data mining only focus on diagnostic accuracy, while neglecting the interpretability of the diagnosis model that is necessary for helping doctors make clinical decisions. To take both accuracy and interpretability into consideration, we propose a stacking-based ensemble learning method that simultaneously constructs the diagnostic model and extracts interpretable diagnostic rules. For this purpose, a multi-objective optimization algorithm is devised to maximize the classification accuracy and minimize the ensemble complexity for model selection. As for model combination, a random forest classifier-based stacking technique is explored for the integration of base learners, i.e., decision trees. Empirical results on real-world data from the General Hospital of PLA demonstrate that the classification performance of the proposed method outperforms that of several state-of-the-art methods in terms of the classification accuracy, sensitivity and specificity. Moreover, the results reveal that several diagnostic rules extracted from the constructed ensemble learning model are accurate and interpretable. Highlights • We propose a stacking-based interpretable selective ensemble learning method. • We select ensemble models with accuracy and complexity under consideration. • We combine selected effective models by random forest-based stacking. • The proposed method is more accurate and interpretable in prostate cancer detection. • We extract a few of effective diagnostic rules for clinical decision support. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
21. Minimally invasive prostate cancer detection test using FISH probes
- Author
-
Tinawi-Aljundi R, Knuth ST, Gildea M, Khal J, Hafron J, Kernen K, Di Loreto R, and Aurich-Costa J
- Subjects
Prostate cancer detection ,OligoFISH ,Oncology ,PSA screening ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Rima Tinawi-Aljundi,1 Shannon T Knuth,2 Michael Gildea,2 Joshua Khal,2 Jason Hafron,1 Kenneth Kernen,1 Robert Di Loreto,1 Joan Aurich-Costa2 1Pathology and Research Department, Michigan Institute of Urology, St Clair Shores, MI, USA; 2Research and Development, Cellay, Inc., Cambridge, MA, USA Purpose: The ability to test for and detect prostate cancer with minimal invasiveness has the potential to reduce unnecessary prostate biopsies. This study was conducted as part of a clinical investigation for the development of an OligoFISH® probe panel for more accurate detection of prostate cancer.Materials and methods: One hundred eligible male patients undergoing transrectal ultrasound biopsies were enrolled in the study. After undergoing digital rectal examination with pressure, voided urine was collected in sufficient volume to prepare at least two slides using ThinPrep. Probe panels were tested on the slides, and 500 cells were scored when possible. From the 100 patients recruited, 85 had more than 300 cells scored and were included in the clinical performance calculations.Results: Chromosomes Y, 7, 10, 20, 6, 8, 16, and 18 were polysomic in most prostate carcinoma cases. Of these eight chromosomes, chromosomes 7, 16, 18, and 20 were identified as having the highest clinical performance as a fluorescence in situ hybridization test and used to manufacture the fluorescence in situ hybridization probe panels. The OligoFISH® probes performed with 100% analytical specificity. When the OligoFISH® probes were compared with the biopsy results for each individual, the test results highly correlated with positive and negative prostate biopsy pathology findings, supporting their high specificity and accuracy. Probes for chromosomes 7, 16, 18, and 20 showed in the receiver operator characteristics analysis an area under the curve of 0.83, with an accuracy of 81% in predicting the biopsy result.Conclusion: This investigation demonstrates the ease of use with high specificity, high predictive value, and accuracy in identifying prostate cancer in voided urine after digital rectal examination with pressure. The test is likely to have positive impact on clinical practice and advance approaches to the detection of prostate cancer. Further evaluation is warranted. Keywords: prostate cancer detection, OligoFISH®, oncology, PSA screening
- Published
- 2016
22. A Hybrid End-to-End Approach Integrating Conditional Random Fields into CNNs for Prostate Cancer Detection on MRI
- Author
-
Paulo Lapa, Mauro Castelli, Ivo Gonçalves, Evis Sala, and Leonardo Rundo
- Subjects
prostate cancer detection ,magnetic resonance imaging ,convolutional neural networks ,conditional random fields ,recurrent neural networks ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Prostate Cancer (PCa) is the most common oncological disease in Western men. Even though a growing effort has been carried out by the scientific community in recent years, accurate and reliable automated PCa detection methods on multiparametric Magnetic Resonance Imaging (mpMRI) are still a compelling issue. In this work, a Deep Neural Network architecture is developed for the task of classifying clinically significant PCa on non-contrast-enhanced MR images. In particular, we propose the use of Conditional Random Fields as a Recurrent Neural Network (CRF-RNN) to enhance the classification performance of XmasNet, a Convolutional Neural Network (CNN) architecture specifically tailored to the PROSTATEx17 Challenge. The devised approach builds a hybrid end-to-end trainable network, CRF-XmasNet, composed of an initial CNN component performing feature extraction and a CRF-based probabilistic graphical model component for structured prediction, without the need for two separate training procedures. Experimental results show the suitability of this method in terms of classification accuracy and training time, even though the high-variability of the observed results must be reduced before transferring the resulting architecture to a clinical environment. Interestingly, the use of CRFs as a separate postprocessing method achieves significantly lower performance with respect to the proposed hybrid end-to-end approach. The proposed hybrid end-to-end CRF-RNN approach yields excellent peak performance for all the CNN architectures taken into account, but it shows a high-variability, thus requiring future investigation on the integration of CRFs into a CNN.
- Published
- 2020
- Full Text
- View/download PDF
23. ProCDet: A New Method for Prostate Cancer Detection Based on MR Images
- Author
-
Zengyou Zhang, Yuejing Qian, and Bo Wang
- Subjects
medicine.medical_specialty ,General Computer Science ,medicine.diagnostic_test ,Computer science ,Feature extraction ,General Engineering ,prostate segmentation ,Cancer ,Magnetic resonance imaging ,MR image ,Image segmentation ,medicine.disease ,Convolutional neural network ,TK1-9971 ,Prostate cancer ,image registration ,medicine.anatomical_structure ,Prostate ,self-supervised learning ,medicine ,General Materials Science ,Segmentation ,Radiology ,Electrical engineering. Electronics. Nuclear engineering ,Prostate cancer detection - Abstract
Prostate cancer is a malignant tumor that occurs in the male prostate. Prostate cancer lesions have the characteristics of small size and blurry outline, which is a challenge to design a robust prostate cancer detection method. At present, clinical diagnosis of prostate cancer is mainly based on magnetic resonance (MR) imaging. However, it is difficult to obtain prostate cancer data, and the data with true values is also very limited, which further increases the difficulty of prostate cancer detection methods based on MR images. To solve these problems, this paper designs a new method of prostate cancer detection based on MR images, which is recorded as ProCDet. The method consists of three modules: registration of prostate MR images, segmentation of prostate, and segmentation of prostate cancer lesions. First, the registration between different sequences of MR images is performed to find the spatial relationship between the different sequences. Then, the designed prostate segmentation network based on the attention mechanism is used to segment the prostate to remove the interference of background information. Finally, a 3D prostate cancer lesion segmentation network based on Focal Tversky Loss is applied to determine the specific location of prostate cancer. Moreover, in order to take full advantage of unlabeled prostate data, this paper designs a self-supervised learning method to improve the accuracy of prostate cancer detection. The proposed ProCDet has been experimentally verified on the ProstateX dataset. When the average number of false-positive lesions per patient is 0.6275, the true-positive rate is 91.82%. Experimental results show that the ProCDet can obtain competitive detection performance.
- Published
- 2021
24. Evaluation of the Differences between Normal and Cancerous Prostate Tissue Response to Simple and Vibro-Neural Stimulation
- Author
-
H. Jamshidian, Farhad Tabatabai Ghomsheh, and Samir Zein
- Subjects
Shear wave elastography ,energy dissipation ,business.industry ,lcsh:R ,Early detection ,lcsh:Medicine ,Stimulation ,prostate cancer detection ,medicine.disease ,prostate tissue ,residual displacement ,Intensity (physics) ,Prostate cancer ,medicine.anatomical_structure ,Prostate ,Neural stimulation ,medicine ,In patient ,neural stimulation ,business ,Biomedical engineering - Abstract
Background: Early detection of prostate cancer has significant benefits for its treatment and can increase the survival chance in patients. In recent years, new methods such as shear wave elastography and vibro-elastography, as well as artificial tactile sensing, have been used to detect a mass in the prostate tissue in-vivo and ex-vivo. This paper aims to investigate the difference between normal and malignant prostate tissue reaction to simple and vibro-neural stimulation for prostate tissue mass detection in order to determine neural stimulation intensity, velocity, and frequency to obtain the best result in detecting the type and location of the tumor. Methods: This study has utilized neural stimulation devices in normal and cancerous tissues. The stimulation velocity, probe location, and the frequency of neural stimulation considered as the independent variables. Results: The results show that for superficial masses, although dependent on the probe, the accuracy of detection at the low speed of 5mm/s is 50% higher than other conditions. On the other hand, in deep masses, with increasing mass depth, the accuracy of detection at the medium speed of 8mm/s is 30% higher than the low speed. Finally, the results showed that with increased stimulation frequency, the possibility of tumor detection, and its accuracy increases by 35%. Conclusion: By improving the accuracy of the neural stimulation device, it can apply to detect hard materials such as tumors and malignant tissues.
- Published
- 2020
25. The addition of a sagittal image fusion improves the prostate cancer detection in a sensor-based MRI /ultrasound fusion guided targeted biopsy.
- Author
-
Günzel, Karsten, Cash, Hannes, Buckendahl, John, Königbauer, Maximilian, Asbach, Patrick, Haas, Matthias, Neymeyer, Jörg, Hinz, Stefan, Miller, Kurt, and Kempkensteffen, Carsten
- Subjects
SAGITTAL curve ,IMAGE fusion ,PROSTATE cancer treatment ,MAGNETIC resonance imaging ,ULTRASONIC imaging ,BIOPSY - Abstract
Background: To explore the diagnostic benefit of an additional image fusion of the sagittal plane in addition to the standard axial image fusion, using a sensor-based MRI/US fusion platform.Methods: During July 2013 and September 2015, 251 patients with at least one suspicious lesion on mpMRI (rated by PI-RADS) were included into the analysis. All patients underwent MRI/US targeted biopsy (TB) in combination with a 10 core systematic prostate biopsy (SB). All biopsies were performed on a sensor-based fusion system. Group A included 162 men who received TB by an axial MRI/US image fusion. Group B comprised 89 men in whom the TB was performed with an additional sagittal image fusion.Results: The median age in group A was 67 years (IQR 61-72) and in group B 68 years (IQR 60-71). The median PSA level in group A was 8.10 ng/ml (IQR 6.05-14) and in group B 8.59 ng/ml (IQR 5.65-12.32). In group A the proportion of patients with a suspicious digital rectal examination (DRE) (14 vs. 29%, p = 0.007) and the proportion of primary biopsies (33 vs 46%, p = 0.046) were significantly lower. The rate of PI-RADS 3 lesions were overrepresented in group A compared to group B (19 vs. 9%; p = 0.044). Classified according to PI-RADS 3, 4 and 5, the detection rates of TB were 42, 48, 75% in group A and 25, 74, 90% in group B. The rate of PCa with a Gleason score ≥7 missed by TB was 33% (18 cases) in group A and 9% (5 cases) in group B; p-value 0.072. An explorative multivariate binary logistic regression analysis revealed that PI-RADS, a suspicious DRE and performing an additional sagittal image fusion were significant predictors for PCa detection in TB. 9 PCa were only detected by TB with sagittal fusion (sTB) and sTB identified 10 additional clinically significant PCa (Gleason ≥7).Conclusion: Performing an additional sagittal image fusion besides the standard axial fusion appears to improve the accuracy of the sensor-based MRI/US fusion platform. [ABSTRACT FROM AUTHOR]- Published
- 2017
- Full Text
- View/download PDF
26. Prostate Cancer Detection and Prognosis: From Prostate Specific Antigen (PSA) to Exosomal Biomarkers.
- Author
-
Filella, Xavier and Foj, Laura
- Subjects
- *
PROSTATE-specific antigen , *DIAGNOSIS , *PROSTATE cancer , *PROGNOSIS , *BIOMARKERS , *MICRORNA - Abstract
Prostate specific antigen (PSA) remains the most used biomarker in the management of early prostate cancer (PCa), in spite of the problems related to false positive results and overdiagnosis. New biomarkers have been proposed in recent years with the aim of increasing specificity and distinguishing aggressive from non-aggressive PCa. The emerging role of the prostate health index and the 4Kscore is reviewed in this article. Both are blood-based tests related to the aggressiveness of the tumor, which provide the risk of suffering PCa and avoiding negative biopsies. Furthermore, the use of urine has emerged as a non-invasive way to identify new biomarkers in recent years, including the PCA3 and TMPRSS2:ERG fusion gene. Available results about the PCA3 score showed its usefulness to decide the repetition of biopsy in patients with a previous negative result, although its relationship with the aggressiveness of the tumor is controversial. More recently, aberrant microRNA expression in PCa has been reported by different authors. Preliminary results suggest the utility of circulating and urinary microRNAs in the detection and prognosis of PCa. Although several of these new biomarkers have been recommended by different guidelines, large prospective and comparative studies are necessary to establish their value in PCa detection and prognosis. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
27. MAPS: A Quantitative Radiomics Approach for Prostate Cancer Detection.
- Author
-
Cameron, Andrew, Khalvati, Farzad, Haider, Masoom A., and Wong, Alexander
- Subjects
- *
DIAGNOSIS , *PROSTATE cancer , *MAGNETIC resonance imaging of cancer , *COMPUTER-assisted image analysis (Medicine) , *FEATURE extraction , *BIOMARKERS , *DIAGNOSTIC imaging - Abstract
This paper presents a quantitative radiomics feature model for performing prostate cancer detection using multiparametric MRI (mpMRI). It incorporates a novel tumor candidate identification algorithm to efficiently and thoroughly identify the regions of concern and constructs a comprehensive radiomics feature model to detect tumorous regions. In contrast to conventional automated classification schemes, this radiomics-based feature model aims to ground its decisions in a way that can be interpreted and understood by the diagnostician. This is done by grouping features into high-level feature categories which are already used by radiologists to diagnose prostate cancer: Morphology, Asymmetry, Physiology, and Size (MAPS), using biomarkers inspired by the PI-RADS guidelines for performing structured reporting on prostate MRI. Clinical mpMRI data were collected from 13 men with histology-confirmed prostate cancer and labeled by an experienced radiologist. These annotated data were used to train classifiers using the proposed radiomics-driven feature model in order to evaluate the classification performance. The preliminary experimental results indicated that the proposed model outperformed each of its constituent feature groups as well as a comparable conventional mpMRI feature model. A further validation of the proposed algorithm will be conducted using a larger dataset as future work. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
28. The Role and Significance of Bioumoral Markers in Prostate Cancer
- Author
-
Maria Magdalena Constantin, Diana Alexandra Savu, Traian Constantin, Gabriel Predoiu, Viorel Jinga, and Ștefana Bucur
- Subjects
Oncology ,Cancer Research ,medicine.medical_specialty ,prostate cancer detection ,Disease ,Review ,urologic and male genital diseases ,bioumoral markers ,Prostate cancer ,Prostate ,Internal medicine ,Medicine ,Blood test ,RC254-282 ,medicine.diagnostic_test ,business.industry ,Genitourinary system ,Incidence (epidemiology) ,screening ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Rectal examination ,medicine.disease ,Prostate-specific antigen ,medicine.anatomical_structure ,business - Abstract
Simple Summary Prostate cancer (PCa) represents a very important health problem worldwide. Used as the main screening method for almost four decades, PSA (Prostate Specific Antigen) has proven its limitations. In this review, the authors try to make an evaluation of the biomarkers commercially available and used to improve the PCa detection in patients with elevated PSA. The authors also present the current PCa screening and diagnosis protocols in Romania. Abstract The prostate is one of the most clinically accessible internal organs of the genitourinary tract in men. For decades, the only method of screening for prostate cancer (PCa) has been digital rectal examination of 1990s significantly increased the incidence and prevalence of PCa and consequently the morbidity and mortality associated with this disease. In addition, the different types of oncology treatment methods have been linked to specific complications and side effects, which would affect the patient’s quality of life. In the first two decades of the 21st century, over-detection and over-treatment of PCa patients has generated enormous costs for health systems, especially in Europe and the United States. The Prostate Specific Antigen (PSA) is still the most common and accessible screening blood test for PCa, but with low sensibility and specificity at lower values (
- Published
- 2021
29. A new predictor is comparable to the updated nomogram in predicting the intermediate- and high-risk prostate cancer but outperforms nomogram in reducing the overtreatment for the low-risk Pca
- Author
-
Hui Wang, Jun Zhou, Sheng Tai, Li Zhang, and Chaozhao Liang
- Subjects
0301 basic medicine ,medicine.medical_specialty ,Multivariate analysis ,Prostate biopsy ,Urology ,prostate cancer detection ,urologic and male genital diseases ,nomogram ,PSA ,03 medical and health sciences ,Prostate cancer ,0302 clinical medicine ,Prostate ,medicine ,Original Research ,PI-RADS ,medicine.diagnostic_test ,business.industry ,Univariate ,Area under the curve ,Nomogram ,medicine.disease ,PSA density ,030104 developmental biology ,medicine.anatomical_structure ,age ,Oncology ,Cancer Management and Research ,030220 oncology & carcinogenesis ,business - Abstract
Hui Wang,1–3 Sheng Tai,1,2 Li Zhang,1,3 Jun Zhou,1–3 Chaozhao Liang1–31Department of Urology, The First Affiliated Hospital of Anhui Medical University, Hefei, People’s Republic of China; 2Anhui Province Key Laboratory of Genitourinary Diseases, Anhui Medical University, Hefei, People’s Republic of China; 3The Institute of Urology, Anhui Medical University, Hefei, People’s Republic of ChinaPurposes: To develop a new predictor and update nomogram based on prostate imaging reporting and data system version 2 (PI-RADS V2) in predicting intermediate- and high-risk prostate cancer (IH-Pca) and reducing the overtreatment for low-risk Pca (L-Pca).Methods: All men that underwent trans-rectal ultrasound-guided 12+X-core prostate biopsy between January 2015 and June 2018 were collected and analyzed. The significant risks (SRs) of Pca were selected by univariate and multivariate analysis. All SRs were divided into four groups (0 to 3 points) based on the probability of PI-RADS. Each patient can obtain a total score (TS). The updated nomogram was established by R package version 3.0. The area under the curve (AUC), net reclassification index (NRI), calibration curves and decision curves were used to evaluate the diagnostic performance.Results: There were 1,078 patients, including 640 (59%) men with normal or L-Pca (N-LPca) and 438 (41%) men with IH-Pca. The scores of TS for IH-Pca and N-LPca were 16.13±3.11 and 10.52±3.32, respectively (P
- Published
- 2019
- Full Text
- View/download PDF
30. Feature fusion of Raman chemical imaging and digital histopathology using machine learning for prostate cancer detection
- Author
-
Stephen P. Finn, Claudia Aura, Patrick Jackman, Susan McKeever, Tiarnan Murphy, R. William G. Watson, Nebras Al-Attar, Elaine W. Kay, Amanda O'Neill, Trevor Doherty, Aoife Gowen, William M. Gallagher, Arman Rahman, Irish Health Research Board (Grant Number HRA-POR-2015-1078), with additional support from the Science Foundation Ireland Investigator Programme OPTi-PREDICT (grant code 15/IA/3104), and the Science Foundation Ireland Strategic Partnership Programme Precision Oncology Ireland POI (grant code 18/SPP/3522). Funding for the Irish Prostate Cancer Research Consortium tissue samples was from Science Foundation Ireland, Grant number: TRA/2010/18, Irish Cancer Society, Grant number: PCI11WAT, and Welcome Trust-HRB Dublin Centre for Clinical Research.
- Subjects
FOS: Computer and information sciences ,Chemical imaging ,Male ,Computer Science - Machine Learning ,medicine.medical_specialty ,Digital Histopathology ,Prostate Cancer Detection ,Quantitative Biology - Quantitative Methods ,Biochemistry ,Machine Learning (cs.LG) ,030218 nuclear medicine & medical imaging ,Analytical Chemistry ,Machine Learning ,03 medical and health sciences ,Prostate cancer ,Engineering ,0302 clinical medicine ,Text mining ,FOS: Electrical engineering, electronic engineering, information engineering ,Electrochemistry ,medicine ,Environmental Chemistry ,Humans ,Raman Chemical Imaging ,Quantitative Methods (q-bio.QM) ,Spectroscopy ,Tissue microarray ,Modality (human–computer interaction) ,business.industry ,Image and Video Processing (eess.IV) ,Cancer ,Prostatic Neoplasms ,Multimodal therapy ,Electrical Engineering and Systems Science - Image and Video Processing ,medicine.disease ,3. Good health ,FOS: Biological sciences ,030220 oncology & carcinogenesis ,Quality of Life ,Histopathology ,Radiology ,Neoplasm Grading ,business - Abstract
The diagnosis of prostate cancer is challenging due to the heterogeneity of its presentations, leading to the over diagnosis and treatment of non-clinically important disease. Accurate diagnosis can directly benefit a patient's quality of life and prognosis. Towards addressing this issue, we present a learning model for the automatic identification of prostate cancer. While many prostate cancer studies have adopted Raman spectroscopy approaches, none have utilised the combination of Raman Chemical Imaging (RCI) and other imaging modalities. This study uses multimodal images formed from stained Digital Histopathology (DP) and unstained RCI. The approach was developed and tested on a set of 178 clinical samples from 32 patients, containing a range of non-cancerous, Gleason grade 3 (G3) and grade 4 (G4) tissue microarray samples. For each histological sample, there is a pathologist labelled DP - RCI image pair. The hypothesis tested was whether multimodal image models can outperform single modality baseline models in terms of diagnostic accuracy. Binary non-cancer/cancer models and the more challenging G3/G4 differentiation were investigated. Regarding G3/G4 classification, the multimodal approach achieved a sensitivity of 73.8% and specificity of 88.1% while the baseline DP model showed a sensitivity and specificity of 54.1% and 84.7% respectively. The multimodal approach demonstrated a statistically significant 12.7% AUC advantage over the baseline with a value of 85.8% compared to 73.1%, also outperforming models based solely on RCI and median Raman spectra. Feature fusion of DP and RCI does not improve the more trivial task of tumour identification but does deliver an observed advantage in G3/G4 discrimination. Building on these promising findings, future work could include the acquisition of larger datasets for enhanced model generalization., Comment: 19 pages, 8 tables, 18 figures
- Published
- 2021
31. Selective invocation of shape priors for deformable segmentation and morphologic classification of prostate cancer tissue microarrays.
- Author
-
Ali, Sahirzeeshan, Veltri, Robert, Epstein, Jonathan I., Christudass, Christhunesa, and Madabhushi, Anant
- Subjects
- *
PROSTATE cancer , *DNA microarrays , *HISTOLOGY , *HYBRID systems , *COMPARATIVE studies , *GLEASON grading system - Abstract
Shape based active contours have emerged as a natural solution to overlap resolution. However, most of these shape-based methods are computationally expensive. There are instances in an image where no overlapping objects are present and applying these schemes results in significant computational overhead without any accompanying, additional benefit. In this paper we present a novel adaptive active contour scheme (AdACM) that combines boundary and region based energy terms with a shape prior in a multi level set formulation. To reduce the computational overhead, the shape prior term in the variational formulation is only invoked for those instances in the image where overlaps between objects are identified; these overlaps being identified via a contour concavity detection scheme. By not having to invoke all three terms (shape, boundary, region) for segmenting every object in the scene, the computational expense of the integrated active contour model is dramatically reduced, a particularly relevant consideration when multiple objects have to be segmented on very large histopathological images. The AdACM was employed for the task of segmenting nuclei on 80 prostate cancer tissue microarray images from 40 patient studies. Nuclear shape based, architectural and textural features extracted from these segmentations were extracted and found to able to discriminate different Gleason grade patterns with a classification accuracy of 86% via a quadratic discriminant analysis (QDA) classifier. On average the AdACM model provided 60% savings in computational times compared to a non-optimized hybrid active contour model involving a shape prior. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
32. Automated prostate cancer grading and diagnosis system using deep learning-based Yolo object detection algorithm.
- Author
-
Salman, Mehmet Emin, Çakirsoy Çakar, Gözde, Azimjonov, Jahongir, Kösem, Mustafa, and Cedi̇moğlu, İsmail Hakkı
- Subjects
- *
CANCER diagnosis , *OBJECT recognition (Computer vision) , *DEEP learning , *COMPUTER vision , *ALGORITHMS , *PROSTATE biopsy , *DATA augmentation - Abstract
Developing an artificial intelligence-based prostate cancer detection and diagnosis system that can automatically determine important regions and accurately classify the determined regions on an input biopsy image. The Yolo general-purpose object detection algorithm was utilized to detect important regions (for the localization task) and to grade the detected regions (for the classification task). The algorithm was re-trained with our prostate cancer dataset. The dataset was created by annotating 500 real prostate tissue biopsy images. The dataset was split into train/test parts as 450/50 real prostate tissue images, respectively, before the data augmentation process. Next, the training set consisting of 450 labeled biopsy images was pre-processed with the data augmentation method. This way, the number of biopsy images in the dataset was increased from 450 to 1776. Then, the algorithm was trained with the dataset and the automatic prostate cancer detection and diagnosis tool was developed. The developed tool was tested with two test sets. The first test set contains 50 images that are similar to the train set. Hence, 97% detection and classification accuracy has been achieved. The second test set contains 137 completely different real prostate tissue biopsy images, thus, 89% detection accuracy has been achieved. In this study, an automatic prostate cancer detection and diagnosis tool was developed. The test results show that high-accuracy (high-performance) prostate cancer diagnosis tools can be developed using AI (computer vision) methods such as object detection algorithms. These systems can decrease the inter-observer variability among pathologists, and help prevent the time delay in the diagnosis phase. • Automated prostate cancer detection and diagnosis system was developed. • The system was developed by applying the Gleason grading on prostate tissue images. • A new PCa dataset was created by a pathologist and reviewed by two other pathologists. • The fine-tuned Yolo object detection algorithm was re-trained via the dataset. • Grading outcomes of the Yolo algorithm was fused with ISUP to make the final decision. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
33. Artificial Intelligence Techniques for Prostate Cancer Detection through Dual-Channel Tissue Feature Engineering
- Author
-
Cho-Hee Kim, Nam Hoon Cho, Suki Kang, Subrata Bhattacharjee, Hee-Cheol Kim, Heung-Kook Choi, and Deekshitha Prakash
- Subjects
Feature engineering ,Cancer Research ,Boosting (machine learning) ,Channel (digital image) ,Computer science ,prostate cancer detection ,Logistic regression ,lcsh:RC254-282 ,Article ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,texture analysis ,binary classification ,business.industry ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,artificial intelligence ,prostate cancer ,Support vector machine ,Tree (data structure) ,Oncology ,Binary classification ,Feature (computer vision) ,dual-channel ,030220 oncology & carcinogenesis ,Artificial intelligence ,business ,tissue feature engineering - Abstract
The optimal diagnostic and treatment strategies for prostate cancer (PCa) are constantly changing. Given the importance of accurate diagnosis, texture analysis of stained prostate tissues is important for automatic PCa detection. We used artificial intelligence (AI) techniques to classify dual-channel tissue features extracted from Hematoxylin and Eosin (H&, E) tissue images, respectively. Tissue feature engineering was performed to extract first-order statistic (FOS)-based textural features from each stained channel, and cancer classification between benign and malignant was carried out based on important features. Recursive feature elimination (RFE) and one-way analysis of variance (ANOVA) methods were used to identify significant features, which provided the best five features out of the extracted six features. The AI techniques used in this study for binary classification (benign vs. malignant and low-grade vs. high-grade) were support vector machine (SVM), logistic regression (LR), bagging tree, boosting tree, and dual-channel bidirectional long short-term memory (DC-BiLSTM) network. Further, a comparative analysis was carried out between the AI algorithms. Two different datasets were used for PCa classification. Out of these, the first dataset (private) was used for training and testing the AI models and the second dataset (public) was used only for testing to evaluate model performance. The automatic AI classification system performed well and showed satisfactory results according to the hypothesis of this study.
- Published
- 2021
34. Prostate-Specific Antigen Modulatory Effect of a Fermented Soy Supplement for Patients with an Elevated Risk of Prostate Cancer: a Non-Randomized, Retrospective Observational Registration
- Author
-
Gert De Meerleer, Steven Joniau, L. Goeman, Gaëtan Devos, Guy Boeckx, Lorenzo Tosco, and A. Battaglia
- Subjects
medicine.medical_specialty ,Prostate biopsy ,Urology ,030232 urology & nephrology ,urologic and male genital diseases ,Gastroenterology ,03 medical and health sciences ,Prostate cancer ,0302 clinical medicine ,Antigen ,Prostate ,Internal medicine ,medicine ,Statistical analysis ,Prospective cohort study ,Original Paper ,medicine.diagnostic_test ,business.industry ,Phytotherapeutics ,medicine.disease ,Prostate-specific antigen ,medicine.anatomical_structure ,Oncology ,Reproductive Medicine ,030220 oncology & carcinogenesis ,Observational study ,business ,Prostate specific antigen ,Prostate cancer detection - Abstract
OBJECTIVE: To investigate the efficacy of a 6-month fermented soy supplement (equol-containing), measured by prostate-specific antigen (PSA) stabilization or PSA decrease from baseline (PSA modulatory effect) in men with an elevated risk of prostate cancer (PCa), with a WHO performance 0-2 and a follow-up of 12 months. METHODS: The patient population consisted of men with an elevated risk of PCa and a prior negative prostate biopsy within 1 year from starting therapy. Serum PSA values were recorded at inclusion (iPSA), at 6 months (1PSA), and optionally at 12 months (2PSA). Statistical analysis was carried out using the Wilcoxon rank sum test (p < 0.05). RESULTS: In total, 137 men used fermented soy for any prostatic reason. After inclusion criteria for an elevated risk of PCa and a prior negative prostate biopsy, we selected 58 patients. Among these, there was a significant PSA modulatory effect (iPSA-1PSA, p = 0.003). This modulatory effect was more strongly evident in the subgroup of patients with an elevated iPSA (≥ 4 ng/ml) (n = 33, iPSA-1PSA, p = 0.003, iPSA-2PSA, p = 0.002). CONCLUSIONS: We demonstrated a significant PSA modulatory effect of a 6-month fermented soy supplement in men with an elevated risk of PCa and a prior negative prostate biopsy. This positive effect is currently being investigated in a prospective study. Further evaluation of the role of fermented soy supplements is warranted in a preventive and therapeutic setting of men at an elevated risk of PCa. ispartof: CURRENT UROLOGY vol:14 issue:3 pages:142-149 ispartof: location:United States status: published
- Published
- 2020
35. MRI-targeted prostate biopsy: the next step forward!
- Author
-
Dan-Vasile Stanca, Iulia Andras, Teodora Telecan, Radu-Tudor Coman, Emanuel Darius Cata, Ioan Coman, Atilla Tamas-Szora, and Nicolae Crisan
- Subjects
medicine.medical_specialty ,Prostate biopsy ,medicine.diagnostic_test ,business.industry ,Transperineal biopsy ,Review: Urology ,In-Bore MRI targeted biopsy ,multiparametric MRI ,prostate cancer detection ,General Medicine ,Gold standard (test) ,medicine.disease ,Management of prostate cancer ,Fusion targeted biopsy ,Prostate cancer ,systematic prostate biopsy ,medicine ,Radiology ,targeted prostate biopsy ,Overdiagnosis ,business ,Prospective cohort study ,Multiparametric Magnetic Resonance Imaging - Abstract
Aim. For decades, the gold standard technique for diagnosing prostate cancer was the 10 to 12 core systematic transrectal or transperineal biopsy, under ultrasound guidance. Over the past years, an increased rate of false negative results and detection of clinically insignificant prostate cancer has been noted, resulting into overdiagnosis and overtreatment. The purpose of the current study was to evaluate the changes in diagnosis and management of prostate cancer brought by MRI-targeted prostate biopsy. Methods. A critical review of literature was carried out using the Medline database through a PubMed search, 37 studies meeting the inclusion criteria: prospective studies published in the past 8 years with at least 100 patients per study, which used multiparametric magnetic resonance imaging as guidance for targeted biopsies. Results. In-Bore MRI targeted biopsy and Fusion targeted biopsy outperform standard systematic biopsy both in terms of overall and clinically significant prostate cancer detection, and ensure a lower detection rate of insignificant prostate cancer, with fewer cores needed. In-Bore MRI targeted biopsy performs better than Fusion biopsy especially in cases of apical lesions. Conclusion. Targeted biopsy is an emerging and developing technique which offers the needed improvements in diagnosing clinically significant prostate cancer and lowers the incidence of insignificant ones, providing a more accurate selection of the patients for active surveillance and focal therapies.
- Published
- 2020
36. Ensemble based system for whole-slide prostate cancer probability mapping using color texture features
- Author
-
DiFranco, Matthew D., O’Hurley, Gillian, Kay, Elaine W., Watson, R. William G., and Cunningham, Padraig
- Subjects
- *
PROSTATE cancer , *DIGITAL technology , *MEDICAL technology , *HISTOLOGY , *PROSTATECTOMY , *CARTOGRAPHY software , *BEAMFORMING , *CLASSIFICATION - Abstract
Abstract: We present a tile-based approach for producing clinically relevant probability maps of prostatic carcinoma in histological sections from radical prostatectomy. Our methodology incorporates ensemble learning for feature selection and classification on expert-annotated images. Random forest feature selection performed over varying training sets provides a subset of generalized CIEL*a*b* co-occurrence texture features, while sample selection strategies with minimal constraints reduce training data requirements to achieve reliable results. Ensembles of classifiers are built using expert-annotated tiles from training images, and scores for the probability of cancer presence are calculated from the responses of each classifier in the ensemble. Spatial filtering of tile-based texture features prior to classification results in increased heat-map coherence as well as AUC values of 95% using ensembles of either random forests or support vector machines. Our approach is designed for adaptation to different imaging modalities, image features, and histological decision domains. [Copyright &y& Elsevier]
- Published
- 2011
- Full Text
- View/download PDF
37. Efforts to resolve the contradictions in early diagnosis of prostate cancer: a comparison of different algorithms of sarcosine in urine.
- Author
-
Cao, D.-L., Ye, D.-W., Zhu, Y., Zhang, H.-L., Wang, Y.-X., and Yao, X.-D.
- Subjects
- *
PROSTATE cancer , *DIAGNOSIS , *ANTIGENS , *BIOMARKERS , *URINE , *ALGORITHMS - Abstract
Controversial data on sarcosine as a promising biomarker for prostate cancer (PCa) detection are present. The objective was to clarify these discrepancies and reevaluate the potential value of sarcosine in PCa. Sarcosine algorithms (supernatant and sediment sarcosine/creatinine, supernatant and sediment log2 (sarcosine/alanine)) in urine samples from 71 untreated patients with PCa, 39 patients with no evidence of malignancy (NEM) and 20 healthy women and men were quantified by liquid chromatography/tandem mass spectrometry. Although any sarcosine algorithms were significantly higher in PCa patients than in NEM patients (all P<0.05), comparable sarcosine values were measured in healthy women and men. Additionally, neither biopsy Gleason score nor clinical T-stage were correlated with sarcosine algorithms (all P>0.05), and receiver operating characteristic curve analysis indicated that the diagnostic power of any of sarcosine algorithms was nonsignificantly higher than that of serum and urine PSA, but nonsignificantly lower than prostate cancer antigen 3 (PCA3) and the percent-free PSA (%fPSA). Improved diagnostic performances were observed when any of sarcosine algorithms was combined with PCA3 or %fPSA. In conclusion, the predictive power of sarcosine in PCa is modest compared with PCA3 and %fPSA. Sarcosine, which awaits more validation before it reaches the clinic, could be included into the list of candidate PCa biomarkers. [ABSTRACT FROM AUTHOR]
- Published
- 2011
- Full Text
- View/download PDF
38. Optimal biopsy strategy for prostate cancer detection by performing a Bayesian network meta-analysis of randomized controlled trials
- Author
-
Yichun Wang, Zhiqiang Qin, Yi Wang, Yamin Wang, Xiang Zhou, Jundong Zhu, Qijie Zhang, Chen Chen, Ninghong Song, and Xianghu Meng
- Subjects
medicine.medical_specialty ,Prostate biopsy ,030232 urology & nephrology ,prostate cancer detection ,urologic and male genital diseases ,law.invention ,03 medical and health sciences ,Prostate cancer ,0302 clinical medicine ,Randomized controlled trial ,law ,Biopsy ,Credible interval ,Medicine ,network meta-analysis ,medicine.diagnostic_test ,business.industry ,Odds ratio ,prostate cancer ,medicine.disease ,Oncology ,Sample size determination ,030220 oncology & carcinogenesis ,Meta-analysis ,randomized controlled trials ,Radiology ,business ,Research Paper - Abstract
Objective: With the increasing recognition of the over-diagnosis and over-treatment of prostate cancer (PCa), the choice of a better prostate biopsy strategy had confused both the patients and clinical surgeons. Hence, this network meta-analysis was conducted to clarify this question. Methods: In the current network meta-analysis, twenty eligible randomized controlled trials (RCTs) with 4,571 participants were comprehensively identified through Pubmed, Embase and Web of Science databases up to July 2017. The pooled odds ratio (OR) with 95% credible interval (CrI) was calculated by Markov chain Monte Carlo methods. A Bayesian network meta-analysis was conducted by using R-3.4.0 software with the help of package “gemtc” version 0.8.2. Results: Six different PCa biopsy strategies and four clinical outcomes were ultimately analyzed in this study. Although, the efficacy of different PCa biopsy strategies by ORs with corresponding 95% CrIs had not yet reached statistical differences, the cumulative rank probability indicated that overall PCa detection rate from best to worst was FUS-GB plus TRUS-GB, FUS-GB, CEUS, MRI-GB, TRUS-GB and TPUS-GB. In terms of clinically significant PCa detection, CEUS, FUS-GB or FUS-GB plus TRUS-GB had a higher, whereas TRUS-GB or TPUS-GB had a relatively lower significant detection rate. Meanwhile, TPUS-GB or TRUS-GB had a higher insignificant PCa detection rate. As for TRUS-guided biopsy, the general trend was that the more biopsy cores, the higher overall PCa detection rate. As for targeted biopsy, it could yield a comparable or even a better effect with fewer cores, compared with traditional random biopsy. Conclusion: Taken together, in a comprehensive consideration of four clinical outcomes, our outcomes shed light on that FUS-GB or FUS-GB plus TRUS-GB showed their superiority, compared with other puncture methods in the detection of PCa. Moreover, TPUS or TRUS-GB was more easily associated with the over-diagnosis and over-treatment of PCa. In addition, targeted biopsy was obviously more effective than traditional random biopsy. The subsequent RCTs with larger sample sizes were required to validate our findings.
- Published
- 2018
- Full Text
- View/download PDF
39. Prostate biopsy in Western Australia 1998–2004.
- Author
-
O'Brien, B. A., Brown, A. L., Shannon, T., and Cohen, R. J.
- Subjects
- *
PROSTATE cancer , *DIAGNOSIS , *PROSTATE-specific antigen , *DIAGNOSTIC specimens , *BIOPSY , *TUMORS - Abstract
We reviewed the status of prostate cancer diagnosis in Western Australia (WA) with the aim of improving decision-making about PSA testing and prostate biopsy. Our patient cohort was 5145 men undergoing an initial biopsy for prostate cancer diagnosis in WA between 1998 and 2004. Transrectal ultrasound-guided biopsies were performed by one of 18 clinicians whereas all pathology was assessed by one urological pathologist. Cancer detection rates were 59% for initial biopsies and 32% for repeat biopsies. High-grade cancer (Gleason sum 7) accounted for 69 and 38% of tumours diagnosed on initial and repeat biopsy, respectively. The rates of cancer diagnosis and detection of high-grade tumours were both 1.6-fold higher in WA patients compared with those obtained at baseline screening of the Prostate, Lung, Colorectal and Ovarian (PLCO) cancer screening trial of US men (P<0.001). These higher than expected rates of cancer detection and high histological grade indicate that urological practice in WA between 1998 and 2004 was significantly more conservative than US practice over this time period, probably leading to underdiagnosis of prostate cancer. Our findings may be relevant to other countries where urological practice differs from that in the United States. [ABSTRACT FROM AUTHOR]
- Published
- 2010
- Full Text
- View/download PDF
40. Multiplexed targeted mass spectrometry assays for prostate cancer-associated urinary proteins
- Author
-
Robin J. Leach, Tao Liu, Tujin Shi, Carrie D. Nicora, Elizabeth A. Vitello, Richard D. Smith, Ian M. Thompson, Sue Ing Quek, Yuqian Gao, William J. Ellis, Thomas L. Fillmore, Alvin Y. Liu, Karin D. Rodland, Wei-Jun Qian, and Song Nie
- Subjects
0301 basic medicine ,Oncology ,medicine.medical_specialty ,Pathology ,Urinary system ,prostate cancer detection ,Urine ,03 medical and health sciences ,Prostate cancer ,Antigen ,targeted mass spectrometry ,Prostate ,Internal medicine ,medicine ,Risk level ,business.industry ,secreted protein biomarkers ,Selected reaction monitoring ,prostate cancer ,medicine.disease ,3. Good health ,030104 developmental biology ,medicine.anatomical_structure ,Targeted mass spectrometry ,selected reaction monitoring ,business ,Research Paper - Abstract
Biomarkers for effective early diagnosis and prognosis of prostate cancer are still lacking. Multiplexed assays for cancer-associated proteins could be useful for identifying biomarkers for cancer detection and stratification. Herein, we report the development of sensitive targeted mass spectrometry assays for simultaneous quantification of 10 prostate cancer-associated proteins in urine. The diagnostic utility of these markers was evaluated with an initial cohort of 20 clinical urine samples. Individual marker concentration was normalized against the measured urinary prostate-specific antigen level as a reference of prostate-specific secretion. The areas under the receiver-operating characteristic curves for the 10 proteins ranged from 0.75 for CXL14 to 0.87 for CEAM5. Furthermore, MMP9 level was found to be significantly higher in patients with high Gleason scores, suggesting a potential of MMP9 as a marker for risk level assessment. Taken together, our work illustrated the feasibility of accurate multiplexed measurements of low-abundance cancer-associated proteins in urine and provided a viable path forward for preclinical verification of candidate biomarkers for prostate cancer.
- Published
- 2017
- Full Text
- View/download PDF
41. Detección de cáncer de próstata en imagen médica mediante Deep Learning
- Author
-
Fuentes Fernández, Javier, Pizarro Pérez, Daniel, Fuentes Jiménez, David, and Universidad de Alcalá. Escuela Politécnica Superior
- Subjects
Resonancia magnética ,Detección de cáncer de próstata ,Deep neural networks ,informática ,Computer science ,Redes neuronales profundas ,Prostate cancer detection ,MRI - Abstract
Este trabajo de fin de grado propone un método de apoyo al diagnóstico de cáncer de próstata a partir de imágenes de resonancia magnética (RM) multiparamétrica. Para ello se plantea un sistema en el cual se pre-procesan dichas imágenes y hace uso de redes neuronales para detectar y localizar el posible cáncer. Se obtiene como resultado la ubicación del cáncer en el espacio ocupado por la próstata y la significancia de la posible anomalía encontrada. Con estos resultados se pretende facilitar la tarea de los radiólogos y permitir que el método de detección por resonancia magnética sea menos costoso y logrando así sustituir a otros métodos mas invasivos y con menos especificidad como las biopsias transrectales., This final degree project proposes a method that can support the diagnose of prostate cancer using multiparametric magnetic resonance imaging (MRI). For this, a system is proposed in which these images are pre-processed and making use of neural networks it is able detect and locate the possible cancer tumour. The result is the location of the cancer in the space occupied by the prostate and the significance of the possible anomaly found. These results are intended to facilitate the task of radiologists and allow the magnetic resonance detection method to be less expensive, thus succeeding in replacing other more invasive and less specific methods such as transrectal biopsies., Grado en Ingeniería Informática
- Published
- 2020
42. A Hybrid End-to-End Approach Integrating Conditional Random Fields into CNNs for Prostate Cancer Detection on MRI
- Author
-
Leonardo Rundo, Ivo Gonçalves, Evis Sala, Mauro Castelli, Paulo Lapa, NOVA Information Management School (NOVA IMS), Information Management Research Center (MagIC) - NOVA Information Management School, NOVA IMS Research and Development Center (MagIC), Castelli, Mauro [0000-0002-8793-1451], Apollo - University of Cambridge Repository, Castelli, M [0000-0002-8793-1451], and Gonçalves, I [0000-0002-5336-7768]
- Subjects
Conditional random field ,Computer science ,02 engineering and technology ,Convolutional neural network ,lcsh:Technology ,030218 nuclear medicine & medical imaging ,lcsh:Chemistry ,0302 clinical medicine ,convolutional neural networks ,0202 electrical engineering, electronic engineering, information engineering ,magnetic resonance imaging ,General Materials Science ,recurrent neural networks ,Graphical model ,Structured prediction ,CRFS ,Instrumentation ,lcsh:QH301-705.5 ,Engineering(all) ,Fluid Flow and Transfer Processes ,General Engineering ,lcsh:QC1-999 ,Computer Science Applications ,020201 artificial intelligence & image processing ,Convolutional neural networks ,udc:004:78 ,Feature extraction ,prostate cancer detection ,Conditional random fields ,03 medical and health sciences ,Magnetic resonance imaging ,conditional random fields ,Materials Science(all) ,SDG 3 - Good Health and Well-being ,Prostate cancer detection ,Recurrent neural networks ,business.industry ,lcsh:T ,Process Chemistry and Technology ,Probabilistic logic ,Pattern recognition ,Recurrent neural network ,lcsh:Biology (General) ,lcsh:QD1-999 ,lcsh:TA1-2040 ,Artificial intelligence ,business ,lcsh:Engineering (General). Civil engineering (General) ,lcsh:Physics - Abstract
Lapa, P., Castelli, M., Gonçalves, I., Sala, E., & Rundo, L. (2020). A hybrid end-to-end approach integrating conditional random fields into CNNs for prostate cancer detection on MRI. Applied Sciences (Switzerland), 10(1), [338]. [Special Issue: Deep Learning and Neuro-Evolution Methods in Biomedicine and Bioinformatics)]. Doi: https://doi.org/10.3390/app10010338 Prostate Cancer (PCa) is the most common oncological disease inWestern men. Even though a growing effort has been carried out by the scientific community in recent years, accurate and reliable automated PCa detection methods on multiparametric Magnetic Resonance Imaging (mpMRI) are still a compelling issue. In this work, a Deep Neural Network architecture is developed for the task of classifying clinically significant PCa on non-contrast-enhanced MR images. In particular, we propose the use of Conditional Random Fields as a Recurrent Neural Network (CRF-RNN) to enhance the classificationperformance of XmasNet, a Convolutional Neural Network (CNN) architecture specifically tailored to the PROSTATEx17 Challenge. The devised approach builds a hybrid end-to-end trainable network, CRF-XmasNet, composed of an initial CNN component performing feature extraction and a CRF-based probabilistic graphical model component for structured prediction, without the need for two separate training procedures. Experimental results show the suitability of this method in terms ofclassification accuracy and training time, even though the high-variability of the observed results must be reduced before transferring the resulting architecture to a clinical environment. Interestingly, the use of CRFs as a separate postprocessing method achieves significantly lower performance with respect to the proposed hybrid end-to-end approach. The proposed hybrid end-to-end CRF-RNN approach yields excellent peak performance for all the CNN architectures taken into account, but it shows a high-variability, thus requiring future investigation on the integration of CRFs into a CNN. publishersversion published
- Published
- 2020
43. 'In-Bore' MRI-guided prostate biopsy for prostate cancer diagnosis: Results from 140 consecutive patients
- Author
-
Marco Giampaoli, Daniele D'Agostino, Riccardo Schiavina, Daniele Romagnoli, Federico Mineo Bianchi, Paolo Corsi, Walter Artibani, Eugenio Brunocilla, Alessandro Del Rosso, Angelo Porreca, D'Agostino D., Romagnoli D., Giampaoli M., Bianchi F.M., Corsi P., Del Rosso A., Schiavina R., Brunocilla E., Artibani W., and Porreca A.
- Subjects
medicine.medical_specialty ,Prostate biopsy ,Urology ,030232 urology & nephrology ,03 medical and health sciences ,Prostate cancer ,0302 clinical medicine ,Multiparametric magnetic resonance ,Prostate ,Biopsy ,medicine ,Transrectal ultrasound-guided prostate biopsy ,Original Paper ,Errata ,medicine.diagnostic_test ,Genitourinary system ,business.industry ,Incidence (epidemiology) ,Magnetic resonance imaging ,medicine.disease ,medicine.anatomical_structure ,Oncology ,Reproductive Medicine ,030220 oncology & carcinogenesis ,Radiology ,business ,Mri guided ,Prostate cancer detection - Abstract
Objectives Transrectal ultrasound-guided biopsy (TRUS-GB) is the current reference standard procedure for diagnosis of prostate cancer (PCa) but this procedure has limitations related to the low detection rate (DR) described in the literature. The aim of the study was to evaluate the DR efficiency, and complication rate in a pure "in-bore" magnetic resonance imaging-guided biopsy (MRI-GB) series according to the Prostate Imaging Reporting and Data System, version 2 (PI-RADS v2). Materials and methods From July 2015 to April 2018, a series of 142 consecutive patients undergoing MRI-GB were prospectively enrolled. According to the European Society of Urogenital Radiology guidelines, the presence of clinically significant PCa (csPCa) on multiparametric magnetic resonance imaging was defined as equivocal, likely, or highly likely according to a PI-RADS v2, score of 3, 4, or 5, respectively. Results Of 142 patients, 76 (53.5%) were biopsy naive and 66 (46.5%) had ≤ 1 previous negative set of random TRUS-GB findings. The MRI-GB findings were positive in 75 of 142 patients with a DR of 52.8%. Of the 76 patients with ≤ 1 previous set of TRUS-GB, 43 had PCa found by MRI-GB, with a DR of 57.3%. The DR in the 66 biopsy-naive patients was 48% (32/66). Of the 75 patients with positive biopsy findings, 54 (80.5%) were found to have csPCa on histological examination. Of these 54 patients, 28 had an International Society of Urological Pathology grade 2; 5 had grade 3, 19 had grade 4, and 2 had grade 5. Considering the anatomic distribution of the index lesions using the PI-RADS v2 scheme, the probability of PCa was greater for lesions located in the peripheral zone (55 of 75, 73.3%) than for those in the central zone (20 of 75, 26.7%). Conclusions Our study conducted on 142 patients confirmed the greater DR of csPCa by MRI-GB, with a very low number of cores needed and a negligible incidence of complications, especially in patients with a previous negative biopsy. MRI-GB is optimal for the diagnosis of anterior and central lesions.
- Published
- 2020
44. A study with the semantic learning machine
- Author
-
Lapa, Paulo, Rundo, Leonardo, Gonçalves, Ivo, Castelli, Mauro, NOVA Information Management School (NOVA IMS), and Information Management Research Center (MagIC) - NOVA Information Management School
- Subjects
SDG 3 - Good Health and Well-being ,Artificial Intelligence ,Multiparamet-ric Magnetic Resonance Imaging ,Semantic Learning Machine ,Convolutional Neural Networks ,Classification ,Neuroevolution ,Software ,Prostate cancer detection ,Theoretical Computer Science - Abstract
Lapa, P., Rundo, L., Gonçalves, I., & Castelli, M. (2019). Enhancing classification performance of convolutional neural networks for prostate cancer detection on magnetic resonance images: A study with the semantic learning machine. In GECCO 2019 : Proceedings of the 2019 Genetic and Evolutionary Computation Conference Companion (pp. 381-382). (GECCO 2019 Companion - Proceedings of the 2019 Genetic and Evolutionary Computation Conference Companion). Association for Computing Machinery, Inc. https://doi.org/10.1145/3319619.3322035 --- This work was partially supported by projects UID/MULTI/00308/2019 and by the European Regional Development Fund through the COMPETE 2020 Programme, FCT - Portuguese Foundation for Science and Technology and Regional Operational Program of the Center Region (CENTRO2020) within project MAnAGER (POCI-01-0145-FEDER-028040). This work was also partially supported by national funds through FCT (Fundação para a Ciência e a Tecnologia) under project DSAIPA/DS/0022/2018 (GADgET). Prostate cancer (PCa) is the most common oncological disease in Western men. Even though a significant effort has been carried out by the scientific community, accurate and reliable automated PCa detection methods are still a compelling issue. In this clinical scenario, high-resolution multiparametric Magnetic Resonance Imaging (MRI) is becoming the most used modality, also enabling quantitative studies. Recently, deep learning techniques have achieved outstanding results in prostate MRI analysis tasks, in particular with regard to image classification. This paper studies the feasibility of using the Semantic Learning Machine (SLM) neuroevolution algorithm to replace the fully-connected architecture commonly used in the last layers of Convolutional Neural Networks (CNNs). The experimental phase considered the PROSTATEx dataset composed of multispectral MRI sequences. The achieved results show that, on the same non-contrast-enhanced MRI series, SLM outperforms with statistical significance a state-of-the-art CNN trained with backpropagation. The SLM performance is achieved without pre-training the underlying CNN with backpropagation. Furthermore, on average the SLM training time is approximately 14 times faster than the backpropagation-based approach. authorsversion published
- Published
- 2019
45. Automatic high-grade cancer detection on prostatectomy histopathology images
- Author
-
Jose A. Gomez, Joseph L. Chin, Carol Johnson, Stephen E. Pautler, Mena Gaed, Madeleine Moussa, Wenchao Han, Aaron D. Ward, and Glenn Bauman
- Subjects
medicine.medical_specialty ,Prostatectomy ,business.industry ,Whole-slide imaging ,medicine.medical_treatment ,Histopathology ,Gleason grade ,Grading ,Grade Cancer ,Region of interest ,medicine ,Adjuvant therapy ,Radiology ,Treatment decision making ,business ,Grading (education) ,Prostate cancer detection - Abstract
Automatic cancer grading and high-grade cancer detection for radical prostatectomy (RP) specimens can benefit pathological assessment for prognosis and post-surgery treatment decision making. We developed and validated an automatic system which grades cancerous tissue as high-grade (Gleason grade 4 and higher) vs. low-grade (Gleason grade 3) on digital histopathology whole-slide images (WSIs). We combined this grading system with our previouslyreported cancer detection system to build a high-grade cancer detection system which automatically finds high-grade cancerous foci on WSIs. The system was tuned on a 3-patient data set and cross-validated against expert-drawn contours on a separate 68-patient data set comprising 286 mid-gland whole-slide images of RP specimens. The system uses machine learning techniques to classify each region of interest (ROI) on the slide as cancer or non-cancer and each cancerous ROI as high-grade or low-grade cancer. We used leave-one-patient-out cross-validation to measure the performance of cancer grading for classified ROIs with three different classifiers and the performance of the high-grade cancer detection system on a per tumor focus basis. The best performing (Fisher) classifier yielded an area under the receiver-operating characteristic curve of 0.87 for cancer grading. The system yielded error rates of 19.5% and 23.4% for pure high-grade (Gleason 4+4, 5+5) and high-grade (Gleason Score ≥ 7) cancer detection, respectively. The system demonstrated potential for practical computation speeds. Upon successful multi-centre validation, this system has the potential to assist the pathologist to find high-grade cancer more efficiently, which benefits the selection and guidance of adjuvant therapy and prognosis post RP.
- Published
- 2019
- Full Text
- View/download PDF
46. Low Levels of Urinary PSA Better Identify Prostate Cancer Patients
- Author
-
Giulio Mengozzi, Sergio Occhipinti, Marco Oderda, Andrea Zitella, Francesco Novelli, Mirella Giovarelli, Luca Molinaro, and Paolo Gontero
- Subjects
Cancer Research ,medicine.medical_specialty ,Prostate biopsy ,diagnosis ,Urinary system ,prostate cancer prevention ,030232 urology & nephrology ,Urology ,prostate cancer detection ,Urine ,Disease ,urologic and male genital diseases ,Article ,03 medical and health sciences ,Prostate cancer ,0302 clinical medicine ,Antigen ,Prostate ,medicine ,Stage (cooking) ,early detection ,RC254-282 ,medicine.diagnostic_test ,business.industry ,screening ,biomarkers ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,medicine.disease ,medicine.anatomical_structure ,Oncology ,030220 oncology & carcinogenesis ,Biomarkers ,Diagnosis ,Early detection ,Prostate cancer detection ,Prostate cancer prevention ,Screening ,business - Abstract
Simple Summary Elevated PSA levels in blood tests are the gold standard for early prostate cancer detection, but its lack of specificity limits its clinical use as a mass screening test. The paradox is that it has long been known that advanced prostate cancers can lose PSA expression. We have observed that in the presence of tumors, the prostate produces and secretes less PSA than in healthy or benign conditions. Therefore, the PSA evaluation in urine provided more accurate information on the presence of prostate tumors than the blood test, representing a new method for the screening of prostate cancer. Abstract Serum prostatic specific antigen (PSA) has proven to have limited accuracy in early diagnosis and in making clinical decisions about different therapies for prostate cancer (PCa). This is partially due to the fact that an increase in PSA in the blood is due to the compromised architecture of the prostate, which is only observed in advanced cancer. On the contrary, PSA observed in the urine (uPSA) reflects the quantity produced by the prostate, and therefore can give more information about the presence of disease. We enrolled 574 men scheduled for prostate biopsy at the urology clinic, and levels of uPSA were evaluated. uPSA levels resulted lower among subjects with PCa when compared to patients with negative biopsies. An indirect correlation was observed between uPSA amount and the stage of disease. Loss of expression of PSA appears as a characteristic of prostate cancer development and its evaluation in urine represents an interesting approach for the early detection of the disease and the stratification of patients.
- Published
- 2021
- Full Text
- View/download PDF
47. The Role and Significance of Bioumoral Markers in Prostate Cancer.
- Author
-
Constantin, Traian, Savu, Diana Alexandra, Bucur, Ștefana, Predoiu, Gabriel, Constantin, Maria Magdalena, and Jinga, Viorel
- Subjects
- *
EARLY detection of cancer , *METASTASIS , *RISK assessment , *QUALITY of life , *TUMOR markers , *PROSTATE-specific antigen , *PROSTATE tumors - Abstract
Simple Summary: Prostate cancer (PCa) represents a very important health problem worldwide. Used as the main screening method for almost four decades, PSA (Prostate Specific Antigen) has proven its limitations. In this review, the authors try to make an evaluation of the biomarkers commercially available and used to improve the PCa detection in patients with elevated PSA. The authors also present the current PCa screening and diagnosis protocols in Romania. The prostate is one of the most clinically accessible internal organs of the genitourinary tract in men. For decades, the only method of screening for prostate cancer (PCa) has been digital rectal examination of 1990s significantly increased the incidence and prevalence of PCa and consequently the morbidity and mortality associated with this disease. In addition, the different types of oncology treatment methods have been linked to specific complications and side effects, which would affect the patient's quality of life. In the first two decades of the 21st century, over-detection and over-treatment of PCa patients has generated enormous costs for health systems, especially in Europe and the United States. The Prostate Specific Antigen (PSA) is still the most common and accessible screening blood test for PCa, but with low sensibility and specificity at lower values (<10 ng/mL). Therefore, in order to avoid unnecessary biopsies, several screening tests (blood, urine, or genetic) have been developed. This review analyzes the most used bioumoral markers for PCa screening and also those that could predict the evolution of metastases of patients diagnosed with PCa. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
48. Prediction Medicine: Biomarkers, Risk Calculators and Magnetic Resonance Imaging as Risk Stratification Tools in Prostate Cancer Diagnosis
- Author
-
Osses, D.F. (Daniël), Roobol-Bouts, M.J. (Monique), Schoots, I.G. (Ivo), Osses, D.F. (Daniël), Roobol-Bouts, M.J. (Monique), and Schoots, I.G. (Ivo)
- Abstract
This review discusses the most recent evidence for currently available risk stratification tools in the detection of clinically significant prostate cancer (csPCa), and evaluates diagnostic strategies that combine these tools. Novel blood biomarkers, such as the Prostate Health Index (PHI) and 4Kscore, show similar ability to predict csPCa. Prostate cancer antigen 3 (PCA3) is a urinary biomarker that has inferior prediction of csPCa compared to PHI, but may be combined with other markers like TMPRSS2-ERG to improve its performance. Original risk calculators (RCs) have the advantage of incorporating easy to retrieve clinical variables and being freely accessible as a web tool/mobile application. RCs perform similarly well as most novel biomarkers. New promising risk models including novel (genetic) markers are the SelectMDx and Stockholm-3 model (S3M). Prostate magnetic resonance imaging (MRI) has evolved as an appealing tool in the diagnostic arsenal with even stratifying abilities, including in the initial biopsy setting. Merging biomarkers, RCs and MRI results in higher performances than their use as standalone tests. In the current era of prostate MRI, the way forward seems to be multivariable risk assessment based on blood and clinical parameters, potentially extended with information from urine samples, as a triaging test for the selection of candidates for MRI and biopsy
- Published
- 2019
- Full Text
- View/download PDF
49. Minimally invasive prostate cancer detection test using FISH probes
- Author
-
Jason Hafron, Rima Tinawi-Aljundi, Joshua Khal, Shannon T Knuth, Joan Aurich-Costa, Robert Di Loreto, Kenneth Kernen, and Michael Gildea
- Subjects
0301 basic medicine ,medicine.medical_specialty ,Prostate biopsy ,OligoFISH® ,Urology ,prostate cancer detection ,03 medical and health sciences ,Prostate cancer ,0302 clinical medicine ,Prostate ,Biopsy ,medicine ,Original Research ,medicine.diagnostic_test ,Receiver operating characteristic ,Research and Reports in Urology ,business.industry ,Ultrasound ,Rectal examination ,medicine.disease ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,oncology ,PSA screening ,Radiology ,business ,Fluorescence in situ hybridization - Abstract
Rima Tinawi-Aljundi,1 Shannon T Knuth,2 Michael Gildea,2 Joshua Khal,2 Jason Hafron,1 Kenneth Kernen,1 Robert Di Loreto,1 Joan Aurich-Costa2 1Pathology and Research Department, Michigan Institute of Urology, StClairShores, MI, USA;2Research and Development, Cellay, Inc., Cambridge, MA, USA Purpose: The ability to test for and detect prostate cancer with minimal invasiveness has the potential to reduce unnecessary prostate biopsies. This study was conducted as part of a clinical investigation for the development of an OligoFISH® probe panel for more accurate detection of prostate cancer.Materials and methods: One hundred eligible male patients undergoing transrectal ultrasound biopsies were enrolled in the study. After undergoing digital rectal examination with pressure, voided urine was collected in sufficient volume to prepare at least two slides using ThinPrep. Probe panels were tested on the slides, and 500 cells were scored when possible. From the 100 patients recruited, 85 had more than 300 cells scored and were included in the clinical performance calculations.Results: Chromosomes Y, 7, 10, 20, 6, 8, 16, and 18 were polysomic in most prostate carcinoma cases. Of these eight chromosomes, chromosomes 7, 16, 18, and 20 were identified as having the highest clinical performance as a fluorescence in situ hybridization test and used to manufacture the fluorescence in situ hybridization probe panels. The OligoFISH® probes performed with 100% analytical specificity. When the OligoFISH® probes were compared with the biopsy results for each individual, the test results highly correlated with positive and negative prostate biopsy pathology findings, supporting their high specificity and accuracy. Probes for chromosomes 7, 16, 18, and 20 showed in the receiver operator characteristics analysis an area under the curve of 0.83, with an accuracy of 81% in predicting the biopsy result.Conclusion: This investigation demonstrates the ease of use with high specificity, high predictive value, and accuracy in identifying prostate cancer in voided urine after digital rectal examination with pressure. The test is likely to have positive impact on clinical practice and advance approaches to the detection of prostate cancer. Further evaluation is warranted. Keywords: prostate cancer detection, OligoFISH®, oncology, PSA screening
- Published
- 2016
50. Automatic cancer detection on digital histopathology images of mid-gland radical prostatectomy specimens
- Author
-
Andrew Warner, Wenchao Han, Mena Gaed, Stephen E. Pautler, Glenn Bauman, Carol Johnson, Aaron D. Ward, Jose A. Gomez, Madeleine Moussa, and Joseph L. Chin
- Subjects
medicine.medical_specialty ,medicine.medical_treatment ,prostate cancer detection ,transfer learning ,Cross-validation ,030218 nuclear medicine & medical imaging ,Surgical pathology ,03 medical and health sciences ,0302 clinical medicine ,Region of interest ,medicine ,Radiology, Nuclear Medicine and imaging ,Radiation treatment planning ,Receiver operating characteristic ,radical prostatectomy pathology ,Prostatectomy ,business.industry ,Digital Pathology ,Image segmentation ,whole-slide histopathology imaging ,Thresholding ,machine learning ,030220 oncology & carcinogenesis ,Radiology ,tissue component segmentation ,business - Abstract
Purpose: Automatic cancer detection on radical prostatectomy (RP) sections facilitates graphical and quantitative surgical pathology reporting, which can potentially benefit postsurgery follow-up care and treatment planning. It can also support imaging validation studies using a histologic reference standard and pathology research studies. This problem is challenging due to the large sizes of digital histopathology whole-mount whole-slide images (WSIs) of RP sections and staining variability across different WSIs. Approach: We proposed a calibration-free adaptive thresholding algorithm, which compensates for staining variability and yields consistent tissue component maps (TCMs) of the nuclei, lumina, and other tissues. We used and compared three machine learning methods for classifying each cancer versus noncancer region of interest (ROI) throughout each WSI: (1) conventional machine learning methods and 14 texture features extracted from TCMs, (2) transfer learning with pretrained AlexNet fine-tuned by TCM ROIs, and (3) transfer learning with pretrained AlexNet fine-tuned with raw image ROIs. Results: The three methods yielded areas under the receiver operating characteristic curve of 0.96, 0.98, and 0.98, respectively, in leave-one-patient-out cross validation using 1.3 million ROIs from 286 mid-gland whole-mount WSIs from 68 patients. Conclusion: Transfer learning with the use of TCMs demonstrated state-of-the-art overall performance and is more stable with respect to sample size across different tissue types. For the tissue types involving Gleason 5 (most aggressive) cancer, it achieved the best performance compared to the other tested methods. This tool can be translated to clinical workflow to assist graphical and quantitative pathology reporting for surgical specimens upon further multicenter validation.
- Published
- 2020
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.