138 results on '"Valášek, Leoš Shivaya"'
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2. Human DUS1L catalyzes dihydrouridine modification at tRNA positions 16/17, and DUS1L overexpression perturbs translation
3. Differential effects of 40S ribosome recycling factors on reinitiation at regulatory uORFs in GCN4 mRNA are not dictated by their roles in bulk 40S recycling
4. Stem-loop-induced ribosome queuing in the uORF2/ATF4 overlap fine-tunes stress-induced human ATF4 translational control
5. Author Correction: Short tRNA anticodon stem and mutant eRF1 allow stop codon reassignment
6. Short tRNA anticodon stem and mutant eRF1 allow stop codon reassignment
7. Perturbations in eIF3 subunit stoichiometry alter expression of ribosomal proteins and key components of the MAPK signaling pathways.
8. Structural Differences in Translation Initiation between Pathogenic Trypanosomatids and Their Mammalian Hosts
9. Selective Translation Complex Profiling Reveals Staged Initiation and Co-translational Assembly of Initiation Factor Complexes
10. RIP-seq reveals RNAs that interact with RNA polymerase and primary sigma factors in bacteria
11. RIP-seq reveals RNAs that interact with RNA polymerase and primary sigma factors in bacteria.
12. Dynamics of the Pollen Sequestrome Defined by Subcellular Coupled Omics
13. Stops making sense – For the people?
14. ZOMES: Cell physiology determined by PCI complexes and protein turnover
15. Functional Characterization of the Role of the N-terminal Domain of the c/Nip1 Subunit of Eukaryotic Initiation Factor 3 (eIF3) in AUG Recognition
16. eIF4G is retained on ribosomes elongating and terminating on short upstream ORFs to control reinitiation in yeast
17. Fail-safe mechanism of GCN4 translational control—uORF2 promotes reinitiation by analogous mechanism to uORF1 and thus secures its key role in GCN4 expression
18. Structural integrity of the PCI domain of eIF3a/TIF32 is required for mRNA recruitment to the 43S pre-initiation complexes
19. Cysteine tRNA acts as a stop codon readthrough-inducing tRNA in the human HEK293T cell line
20. Increased expression of tryptophan and tyrosine tRNAs elevates stop codon readthrough of reporter systems in human cell lines
21. The eIF3c/NIP1 PCI domain interacts with RNA and RACK1/ASC1 and promotes assembly of translation preinitiation complexes
22. Unique features of mRNA translation initiation in trypanosomatids
23. Canonical and non-canonical nuclear genetic codes: genomics of Blastocrithidiinae.
24. Adapted formaldehyde gradient cross-linking protocol implicates human eIF3d and eIF3c, k and l subunits in the 43S and 48S pre-initiation complex assembly, respectively
25. uS3/Rps3 controls fidelity of translation termination and programmed stop codon readthrough in co-operation with eIF3
26. Stem-loop-induced ribosome queuing in the uORF2/ATF4overlap fine-tunes stress-induced human ATF4 translational control
27. Adapted formaldehyde gradient cross-linking protocol implicates human eIF3d and eIF3c, k and l subunits in the 43S and 48S pre-initiation complex assembly, respectively.
28. Please do not recycle! Translation reinitiation in microbes and higher eukaryotes
29. Does eIF3 promote reinitiation after translation of short upstream ORFs also in mammalian cells?
30. Embraced by eIF3: structural and functional insights into the roles of eIF3 across the translation cycle
31. An emergency brake for protein synthesis
32. In vivoevidence that eIF3 stays bound to ribosomes elongating and terminating on short upstream ORFs to promote reinitiation
33. Protocol for detecting and quantifying human ATF4-HA in non-stress versus stress conditions using automated and quantitative western blotting (Jess)
34. Eukaryotic translation initiation factor 3 plays distinct roles at the mRNA entry and exit channels of the ribosomal preinitiation complex
35. Human eIF3b and eIF3a serve as the nucleation core for the assembly of eIF3 into two interconnected modules: the yeast-like core and the octamer
36. A systematic computational analysis of the rRNA–3′ UTR sequence complementarity suggests a regulatory mechanism influencing post-termination events in metazoan translation
37. In-depth analysis of cis-determinants that either promote or inhibit reinitiation on GCN4 mRNA after translation of its four short uORFs
38. Rules of UGA-N decoding by near-cognate tRNAs and analysis of readthrough on short uORFs in yeast
39. Translation initiation factor eIF3 promotes programmed stop codon readthrough
40. In vivo evidence that eIF3 stays bound to ribosomes elongating and terminating on short upstream ORFs to promote reinitiation.
41. Author Correction: Short tRNA anticodon stem and mutant eRF1 allow stop codon reassignment.
42. Functional and Biochemical Characterization of Human Eukaryotic Translation Initiation Factor 3 in Living Cells
43. Translation Initiation Factors eIF3 and HCR1 Control Translation Termination and Stop Codon Read-Through in Yeast Cells
44. Nuclear LSm8 affects number of cytoplasmic processing bodies via controlling cellular distribution of Like-Sm proteins
45. Small Ribosomal Protein RPS0 Stimulates Translation Initiation by Mediating 40S-Binding of eIF3 via Its Direct Contact with the eIF3a/TIF32 Subunit
46. The eIF3c/NIP1 PCI domain interacts with RNA and RACK1/ASC1 and promotes assembly of translation preinitiation complexes
47. Translation Reinitiation Relies on the Interaction between eIF3a/TIF32 and Progressively Folded cis-Acting mRNA Elements Preceding Short uORFs
48. Fail-safe mechanism of GCN4 translational control--uORF2 promotes reinitiation by analogous mechanism to uORF1 and thus secures its key role in GCN4 exp\ression.
49. Protocol for detecting and quantifying hATF4-HA in non-stress versus stress conditions using automated and quantitative Jess western blotting.
50. Impacts of yeast Tma20/MCTS1, Tma22/DENR and Tma64/eIF2D on translation reinitiation and ribosome recycling.
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