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Dryland ecosystems cover 40% of our planet's land surface, support billions of people, and are responding rapidly to climate and land use change. These expansive systems also dominate core aspects of Earth's climate, storing and exchanging vast amounts of water, carbon, and energy with the atmosphere. Despite their indispensable ecosystem services and high vulnerability to change, drylands are one of the least understood ecosystem types, partly due to challenges studying their heterogeneous landscapes and misconceptions that drylands are unproductive "wastelands." Consequently, inadequate understanding of dryland processes has resulted in poor model representation and forecasting capacity, hindering decision making for these at‐risk ecosystems. NASA satellite resources are increasingly available at the higher resolutions needed to enhance understanding of drylands' heterogeneous spatiotemporal dynamics. NASA's Terrestrial Ecology Program solicited proposals for scoping a multi‐year field campaign, of which Adaptation and Response in Drylands (ARID) was one of two scoping studies selected. A primary goal of the scoping study is to gather input from the scientific and data end‐user communities on dryland research gaps and data user needs. Here, we provide an overview of the ARID team's community engagement and how it has guided development of our framework. This includes an ARID kickoff meeting with over 300 participants held in October 2023 at the University of Arizona to gather input from data end‐users and scientists. We also summarize insights gained from hundreds of follow‐up activities, including from a tribal‐engagement focused workshop in New Mexico, conference town halls, intensive roundtables, and international engagements. Plain Language Summary: Drylands are landscapes with limited water availability, which cover 40% of Earth's land surfaces, support billions of humans, and play a substantial role in Earth's weather and climate systems. However, these ecosystems are under threat from droughts and heatwaves. They are also poorly understood because of challenges measuring their highly diverse vegetation types and interspersed vegetation cover and because of incorrect perceptions that they are unimportant "wastelands." These limitations make it challenging to manage their landscapes and quantify how drylands are driving Earth's weather and climate. NASA solicited proposals for a multi‐year field campaign, of which Adaptation and Response in Drylands (ARID) was one of two scoping studies selected. The ARID scoping study aims to design a plan for how NASA satellite, aircraft, and field instruments can be used to better understand dryland ecosystems and their response to change. A primary scoping goal is to engage with scientists and data‐users, especially those who manage land, to understand research and management priorities in drylands. Here, we discuss details of our meeting with over 300 scientists and data‐users in Tucson, AZ in October 2023. We also highlight feedback from our tribal‐focused workshop in New Mexico, conference town halls, and international meetings. Key Points: Adaptation and Response in Drylands (ARID) is a 1‐year scoping study for a multi‐year NASA Terrestrial Ecology dryland field campaignAn ARID workshop was held in Tucson, Arizona in October 2023 with more than 30 data end‐users and 300 scientists in attendanceFurther input from hundreds of researchers and end‐users was obtained through workshops, conference townhalls, and tribal engagement [ABSTRACT FROM AUTHOR]

Abstract Ongoing pressures on global biodiversity require conservation action that is not possible without effective biomonitoring. Terrestrial vertebrate surveys are commonly performed using camera traps, a time‐intensive method known to miss many small or arboreal species and birds. Recent advances have shown airborne eDNA to be a potentially suitable technique to more effectively monitor vertebrate communities in a time‐ and cost‐effective manner. Here, we test whether commercially available air samplers that collect air particles 24/7 during a 1‐week period can be used to detect the presence of vertebrates through airborne eDNA. The results are compared to camera trap records at three locations with differing habitats in the Netherlands. Simultaneous sampling with three different air samplers for 3 weeks resulted in detection of 154 vertebrate taxa, of which the majority were birds or mammals (113 and 33 species, respectively), along with four fish and four amphibian species. All species observed using camera traps were also retrieved via airborne eDNA, although not on every day of sampling. The Burkard spore trap, used routinely for pollen monitoring, showed the highest number of vertebrate species, and only in three samples when a mammal species was detected using a camera trap it remained undetected via eDNA. We also detected unique species at the three locations using airborne eDNA, indicative of the habitat in which they were living. However, we also detected species that we could not account for. The multitude of species found using airborne eDNA compared to camera traps indicate the sensitivity of the method; however, subsequent studies should prioritize validation of these findings through alternative biomonitoring approaches.

There is increasing evidence that fossil-fuel burning, and consequential global heating of 1.1°C to date, has led to the increased occurrence and severity of extreme environmental events. It is well documented how such events have impacted society outside Antarctica through enhanced levels of rainfall and flooding, heatwaves and wildfires, drought and water/food shortages and episodes of intense cooling. Here, we briefly examine evidence for extreme events in Antarctica and the Southern Ocean across a variety of environments and timescales. We show how vulnerable natural Antarctic systems are to extreme events and highlight how governance and environmental protection of the continent must take them into account. Given future additional heating of at least 0.4°C is now unavoidable (to contain heating to the “Paris Agreement 1.5°C” scenario), and may indeed be higher unless drastic action is successfully taken on reducing greenhouse gas emissions to net zero by mid-Century, we explain it is virtually certain that future Antarctic extreme events will be more pronounced than those observed to date.

Ecologists are increasingly recognizing the importance of stochastic processes in generating spatial and temporal variation in biological communities. This variation is very high in soil, which hosts not

Decomposition studies have been conducted in several regions of the world, but relatively few have investigated taphonomy in tropical environments. Even fewer have explored carcass decomposition during multiple tropical seasons, leaving the relationships between season and decomposition in tropical environments poorly understood. Ten decomposition studies using 30 carcasses were conducted in Honolulu, Hawaii, USA to start addressing this knowledge gap. These studies show that some postmortem processes were observed regardless of season. Carcass temperature and chemistry were spatiotemporally variable. Fly larval masses were consistently observed within 3 days (∼75 ADD) postmortem and carcasses lost 60%–90% of mass by 10 days (∼250 ADD) postmortem (Total Body Score ∼26). Season had a significant effect on decomposition, yet the warmest and most humid seasons did not always result in the most rapid and extensive decomposition. Seasonal variation appears to be less pronounced than at other tropical decomposition sites.

This research investigates the potential of additive manufacturing and digital planning tools for the creation of location-specific façade redesigns that can host cavity-dependent animal species and develops methods for their realization. The proposed approach is explored based on a case study of a student dormitory in need of renovation in the urban area of Munich. Based on theoretical knowledge and design experimentations that link the fields of architecture, climate-responsive design, terrestrial ecology, and digital fabrication, a set of design principles for the additive manufacturing of inhabitable ceramic tiles is conceived and transferred into a computational design tool. The conception of single tiles and the overall façade design are developed in terms of their positive climatic impact on both the animal species and humans, their nesting opportunities, their structural feasibility, and their integrability with standard ceramic façade systems. To verify the fabricability of the proposed design, a façade fragment was additively manufactured as a prototype in 1:1 scale. The initial findings presented in this paper provide a glimpse of how emerging digital technologies could provide new ways to expand current habitual architectural planning and fabrication tools, to enable the creation of site-specific solutions, and to bring together human and animal needs.

This research investigates the potential of additive manufacturing and digital planning tools for the creation of location-specific façade redesigns that can host cavity-dependent animal species and develops methods for their realization. The proposed approach is explored based on a case study of a student dormitory in need of renovation in the urban area of Munich. Based on theoretical knowledge and design experimentations that link the fields of architecture, climate-responsive design, terrestrial ecology, and digital fabrication, a set of design principles for the additive manufacturing of inhabitable ceramic tiles is conceived and transferred into a computational design tool. The conception of single tiles and the overall façade design are developed in terms of their positive climatic impact on both the animal species and humans, their nesting opportunities, their structural feasibility, and their integrability with standard ceramic façade systems. To verify the fabricability of the proposed design, a façade fragment was additively manufactured as a prototype in 1:1 scale. The initial findings presented in this paper provide a glimpse of how emerging digital technologies could provide new ways to expand current habitual architectural planning and fabrication tools, to enable the creation of site-specific solutions, and to bring together human and animal needs. [ABSTRACT FROM AUTHOR]

The current and future consequences of anthropogenic impacts such as climate change and habitat loss on ecosystems will be better understood and therefore addressed if diverse ecological data from multiple environmental contexts are more effectively shared. Re-use requires that data are readily available to the scientific scrutiny of the research community. A number of repositories to store shared data have emerged in different ecological domains and developments are underway to define common data and metadata standards. Nevertheless, the goal is far from being achieved and many challenges still need to be addressed. The definition of best practices for data sharing and re-use can benefit from the experience accumulated by pilot collaborative projects. The Euromammals bottom-up initiative has pioneered collaborative science in spatial animal ecology since 2007. It involves more than 150 institutes to address scientific, management and conservation questions regarding terrestrial mammal species in Europe using data stored in a shared database. In this manuscript we present some key lessons that we have learnt from the process of making shared data and knowledge accessible to researchers and we stress the importance of data management for data quality assurance. We suggest putting in place a pro-active data review before data are made available in shared repositories via robust technical support and users’ training in data management and standards. We recommend pursuing the definition of common data collection protocols, data and metadata standards, and shared vocabularies with direct involvement of the community to boost their implementation. We stress the importance of knowledge sharing, in addition to data sharing. We show the crucial relevance of collaborative networking with pro-active involvement of data providers in all stages of the scientific process. Our main message is that for data-sharing collaborative efforts to obtain substantial and durable scientific returns, the goals should not only consist in the creation of e-infrastructures and software tools but primarily in the establishment of a network and community trust. This requires moderate investment, but over long-term horizons.

Dispersal is a critical, but costly, stage of life. During the active phase of dispersal—called transience—individuals face many costs, from increased mortality to reduced foraging opportunities. One cost that is often assumed, but rarely explicitly tested, is the energy expended in making large dispersal movements. However, this cost is not only determined by the distance individual's move, but also how they move. Using high‐resolution GPS tracking of dispersing and resident vulturine guineafowl (Acryllium vulturinum), we show that transient individuals exhibit distinct movement behaviours—travelling farther, faster and straighter—that result in a significant reduction in the energetic costs of making large displacements. This strategy allows dispersing birds to travel, on average, 33.8% farther each day with only a 4.1% cost increase and without spending more time moving. Our study suggests that adaptive movement strategies can largely mitigate movement costs during dispersal, and that such strategies may be common. [ABSTRACT FROM AUTHOR]

Abstract The biogeochemical processes of carbon (C), nitrogen (N), and phosphorous (P) are fully coupled in the Earth system, which shape the structure, functioning, and dynamics of terrestrial ecosystems. However, the representation of P cycle in terrestrial biosphere models (TBMs) is still in an early stage. Here we incorporated P processes and C‐N‐P interactions into the C‐N coupled Dynamic Land Ecosystem Model (DLEM‐CNP), which had a major feature of the ability in simulating the N and P colimitation on vegetation C assimilation. DLEM‐CNP was intensively calibrated and validated against daily or annual observations from four eddy covariance flux sites, two Hawaiian sites along a chronosequence of soils, and other 13 tropical forest sites. The results indicate that DLEM‐CNP significantly improved simulations of forest gross and net primary production (R2: 0.36–0.97, RMSE:1.1–1.49 g C m−2 year−1 for daily GPP at eddy covariance flux sites; R2 = 0.92, RMSE = 176.7 g C m−2 year−1 for annual NPP across 13 tropical forest sites). The simulations were also consistent with field observations in terms of biomass, leaf N:P ratio and plant response to fertilizer addition. A sensitivity analysis suggests that simulated results are reasonably robust against uncertainties in model parameter estimates and the model was very sensitive to parameters of P uptake. These results suggest that incorporating P processes and N‐P interaction into terrestrial biosphere models is of critical importance for accurately estimating C dynamics in tropical forests, particularly those P‐limited ones.

Environmental sensor networks are now commonly being deployed within environmental observatories and as components of smaller-scale ecological and environmental experiments. Effectively using data from these sensor networks presents technical challenges that are difficult for scientists to overcome, severely limiting the adoption of automated sensing technologies in environmental science. The Realtime Environment for Analytical Processing (REAP) is an NSF-funded project to address the technical challenges related to accessing and using heterogeneous sensor data from within the Kepler scientific workflow system. Using distinct use cases in terrestrial ecology and oceanography as motivating examples, we describe workflows and extensions to Kepler to stream and analyze data from observatory networks and archives. We focus on the use of two newly integrated data sources in Kepler: DataTurbine and OPeNDAP. Integrated access to both near real-time data streams and data archives from within Kepler facilitates both simple data exploration and sophisticated analysis and modeling with these data sources.

The biogeochemical processes of carbon (C), nitrogen (N), and phosphorous (P) are fully coupled in the Earth system, which shape the structure, functioning, and dynamics of terrestrial ecosystems. However, the representation of P cycle in terrestrial biosphere models (TBMs) is still in an early stage. Here we incorporated P processes and C‐N‐P interactions into the C‐N coupled Dynamic Land Ecosystem Model (DLEM‐CNP), which had a major feature of the ability in simulating the N and P colimitation on vegetation C assimilation. DLEM‐CNP was intensively calibrated and validated against daily or annual observations from four eddy covariance flux sites, two Hawaiian sites along a chronosequence of soils, and other 13 tropical forest sites. The results indicate that DLEM‐CNP significantly improved simulations of forest gross and net primary production (R2: 0.36–0.97, RMSE:1.1–1.49 g C m−2 year−1 for daily GPP at eddy covariance flux sites; R2 = 0.92, RMSE = 176.7 g C m−2 year−1 for annual NPP across 13 tropical forest sites). The simulations were also consistent with field observations in terms of biomass, leaf N:P ratio and plant response to fertilizer addition. A sensitivity analysis suggests that simulated results are reasonably robust against uncertainties in model parameter estimates and the model was very sensitive to parameters of P uptake. These results suggest that incorporating P processes and N‐P interaction into terrestrial biosphere models is of critical importance for accurately estimating C dynamics in tropical forests, particularly those P‐limited ones. Plain Language Summary: Terrestrial carbon dynamics are usually regulated by nitrogen and phosphorus availability. However, most current terrestrial biosphere models or land surface models have ignored C, N, and P interactions, resulting in a large uncertainty in estimating the response of terrestrial ecosystems to environmental changes. Through coupling the P processes into an existing C‐N model, we have improved the model performance in simulating carbon dynamics in tropical forests. Model evaluation against field observations indicates that inclusion of P processes and N‐P colimitation on carbon assimilation is critical for tropical forests of different nutrient limits. Key Points: Phosphorus processes have been incorporated into the Dynamic Land Ecosystem ModelThe newly introduced N and P colimitation scheme improves the simulations of tropical forest GPP and NPPRepresentation of N and P interactions in terrestrial biosphere models is important for P‐limited tropical forests [ABSTRACT FROM AUTHOR]

Abstract: Terrestrial LiDAR (light detection and ranging) technologies have created new means of quantifying forest canopy structure, allowing not only the estimation of biomass, but also descriptions of the position and variability in canopy elements in space. Such measures provide novel structural information broadly useful to ecologists. There is a growing need for both a detailed taxonomy of forest canopy structural complexity (CSC) and open, transparent, and flexible tools to quantify complexity in ways that will advance foundational ecological knowledge of structure‐function relationships. The CSC taxonomy we present groups structural descriptors into five categories: leaf area and density, canopy height, canopy arrangement, canopy openness, and canopy variability. This paper also introduces the r package forestr, the first open‐source r package for the calculation of CSC metrics from terrestrial LiDAR data. The r package forestr is an analysis toolbox that works with portable canopy LiDAR (PCL) data and other pixelated/voxelized point clouds derived from terrestrial LiDAR scanning (TLS) data to calculate CSC metrics of interest to ecologists, modellers, forest managers, and remote sensing scientists. [ABSTRACT FROM AUTHOR]

NASA’s Ice, Cloud and Land Elevation Satellite-2 (ICESat-2) launched in fall 2018 and has since collected continuous elevation data over the Earth’s surface. The primary scientific objective is to measure the cryosphere for studies related to land ice and sea ice characteristics. The vantage point from space, however, provides the opportunity to measure global surfaces including oceans, land, and vegetation. The ICESat-2 mission has dedicated products to the represented surface types, including an along-track elevation profile of terrain and canopy heights (ATL08). This study presents the first look at the ATL08 product and the quantitative assessment of the canopy and terrain height retrievals as compared to airborne lidar data. The study also provides qualitative examples of ICESat-2 observations from selected ecosystems to highlight the broad capability of the satellite for vegetation applications. Analysis of the mission’s preliminary ATL08 data product accuracy using an ICESat-2 transect over a vegetated region of Finland indicates a 5 m offset in geolocation knowledge (horizontal accuracy) well within the 6.5 m mission requirement. The vertical RMSE for the terrain and canopy height retrievals for one transect are 0.85 m and 3.2 m respectively.

Decomposition studies have been conducted in several regions of the world, but relatively few have investigated taphonomy in tropical environments. Even fewer have explored carcass decomposition during multiple tropical seasons, leaving the relationships between season and decomposition in tropical environments poorly understood. Ten decomposition studies using 30 carcasses were conducted in Honolulu, Hawaii, USA to start addressing this knowledge gap. These studies show that some postmortem processes were observed regardless of season. Carcass temperature and chemistry were spatiotemporally variable. Fly larval masses were consistently observed within 3 days (∼75 ADD) postmortem and carcasses lost 60%-90% of mass by 10 days (∼250 ADD) postmortem (Total Body Score ∼26). Season had a significant effect on decomposition, yet the warmest and most humid seasons did not always result in the most rapid and extensive decomposition. Seasonal variation appears to be less pronounced than at other tropical decomposition sites., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2023 The Authors.)

The importance of vegetation structure and biomass in controlling land-atmosphere exchange is widely recognized, but measurements of canopy structure are challenging, time consuming, and often rely on destructive methods. The Microsoft Kinect is an infrared sensor designed for video gaming that outputs synchronized color and depth images and that has the potential to allow rapid characterization of vegetation structure. We compared depth images from a Kinect sensor with manual measurements of plant structure and size for two species growing in a California grassland. The depth images agreed well with the horizontal and vertical measurements of plant size made manually. Similarly, the plant volumes calculated with a three-dimensional convex hulls approach was well related to plant biomass. The Kinect showed some limitations for ecological observation associated with a short measurement range and daytime light contamination. Nonetheless, the Kinect’s light weight, fast acquisition time, low power requirement, and cost make it a promising tool for rapid field surveys of canopy structure, especially in small-statured vegetation.

Phi coefficient directly depends on the frequencies of occurrence of organisms and has been widely used in vegetation ecology to analyse the associations of organisms with site groups, providing a characterization of ecological preference, but its application in soil ecology remains rare. Based on a single field experiment, this study assessed the applicability of phi coefficient in indicating the habitat preferences of soil fauna, through comparing phi coefficient-induced results with those of ordination methods in charactering soil fauna-habitat(factors) relationships. Eight different habitats of soil fauna were implemented by reciprocal transfer of defaunated soil cores between two types of subtropical forests. Canonical correlation analysis (CCorA) showed that ecological patterns of fauna-habitat relationships and inter-fauna taxa relationships expressed, respectively, by phi coefficients and predicted abundances calculated from partial redundancy analysis (RDA), were extremely similar, and a highly significant relationship between the two datasets was observed (Pillai's trace statistic = 1.998, P = 0.007). In addition, highly positive correlations between phi coefficients and predicted abundances for Acari, Collembola, Nematode and Hemiptera were observed using linear regression analysis. Quantitative relationships between habitat preferences and soil chemical variables were also obtained by linear regression, which were analogous to the results displayed in a partial RDA biplot. Our results suggest that phi coefficient could be applicable on a local scale in evaluating habitat preferences of soil fauna at coarse taxonomic levels, and that the phi coefficient-induced information, such as ecological preferences and the associated quantitative relationships with habitat factors, will be largely complementary to the results of ordination methods. The application of phi coefficient in soil ecology may extend our knowledge about habitat preferences and distribution-abundance relationships, which will benefit the understanding of biodistributions and variations in community compositions in the soil. Similar studies in other places and scales apart from our local site will be need for further evaluation of phi coefficient. [ABSTRACT FROM AUTHOR]

To address the need for published data, considerable effort has gone into formalizing the process of data publication. From funding agencies to publishers, data publication has rapidly become a requirement. Digital Object Identifiers (DOI) and data citations have enhanced the integration and availability of data. The challenge facing data publishers now is to deal with the increased number of publishable data products and most importantly the difficulties of publishing diverse data products into an online archive. The Oak Ridge National Laboratory Distributed Active Archive Center (ORNL DAAC), a NASA-funded data center, faces these challenges as it deals with data products created by individual investigators. This paper summarizes the challenges of curating data and provides a summary of a workflow solution that ORNL DAAC researcher and technical staffs have created to deal with publication of the diverse data products. The workflow solution presented here is generic and can be applied to data from any scientific domain and data located at any data center. [ABSTRACT FROM AUTHOR]

Despite suggestions that animal pollinators are crucial for human nutritional health, no studies have actually tested this claim. Here, we combined data on crop pollination requirements, food nutrient densities, and actual human diets to predict the effects of pollinator losses on the risk of nutrient deficiency. In four developing countries and across five nutrients, we found that 0 to 56% of populations would become newly at risk if pollinators were removed. Increases in risk were most pronounced for vitamin A in populations with moderate levels of total nutrient intake. Overall, the effects of pollinator decline varied widely among populations and nutrients. We conclude that the importance of pollinators to human nutrition depends critically on the composition of local diets, and cannot be reliably predicted from global commodity analyses. We identify conditions under which severe health effects of pollinator loss are most likely to occur. [ABSTRACT FROM AUTHOR]

Climate change may affect ecosystems and biodiversity through the impacts of rising temperature on species’ body size. In terms of physiology and genetics, the colony is the unit of selection for ants so colony size can be considered the body size of a colony. For polydomous ant species, a colony is spread across several nests. This study aims to clarify how climate change may influence an ecologically significant ant species group by investigating thermal effects on wood ant colony size. The strong link between canopy cover and the local temperatures of wood ant’s nesting location provides a feasible approach for our study. Our results showed that nests were larger in shadier areas where the thermal environment was colder and more stable compared to open areas. Colonies (sum of nests in a polydomous colony) also tended to be larger in shadier areas than in open areas. In addition to temperature, our results supported that food resource availability may be an additional factor mediating the relationship between canopy cover and nest size. The effects of canopy cover on total colony size may act at the nest level because of the positive relationship between total colony size and mean nest size, rather than at the colony level due to lack of link between canopy cover and number of nests per colony. Causal relationships between the environment and the life-history characteristics may suggest possible future impacts of climate change on these species. [ABSTRACT FROM AUTHOR]

The fact that herbivores and predators exert top-down effects to alter community composition and dynamics at lower trophic levels is no longer controversial, yet we still lack evidence of the full nature, extent, and longer-term effects of these impacts. Here, we use results from a set of replicated experiments on the local impacts of white-tailed deer to evaluate the extent to which such impacts could account for half-century shifts in forest plant communities across the upper Midwest, USA. We measured species' responses to deer at four sites using 10–20 year-old deer exclosures. Among common species, eight were more abundant outside the exclosures, seven were commoner inside, and 16 had similar abundances in- and outside. Deer herbivory greatly increased the abundance of ferns and graminoids and doubled the abundance of exotic plants. In contrast, deer greatly reduced tree regeneration, shrub cover (100–200 fold in two species), plant height, plant reproduction, and the abundance of forbs. None of 36 focal species increased in reproduction or grew taller in the presence of deer, contrary to expectations. We compared these results to data on 50-year regional shifts in species abundances across 62 sites. The effects of herbivory by white-tailed deer accurately account for many of the long-term regional shifts observed in species' abundances (R2 = 0.41). These results support the conjecture that deer impacts have driven many of the regional shifts in forest understory cover and composition observed in recent decades. Our ability to link results from shorter-term, local experiments to regional long-term studies of ecological change strengthens the inferences we can draw from both approaches. [ABSTRACT FROM AUTHOR]

In an era of biodiversity crisis, arthropods have great potential to inform conservation assessment and test hypotheses about community assembly. This is because their relatively narrow geographic distributions and high diversity offer high-resolution data on landscape-scale patterns of biodiversity. However, a major impediment to the more widespread application of arthropod data to a range of scientific and policy questions is the poor state of modern arthropod taxonomy, especially in the tropics. Inventories of spiders and other megadiverse arthropods from tropical forests are dominated by undescribed species. Such studies typically organize their data using morphospecies codes, which make it difficult for data from independent inventories to be compared and combined. To combat this shortcoming, we offer cyberdiversity, an online community-based approach for reconciling results of independent inventory studies where current taxonomic knowledge is incomplete. Participating scientists can upload images and DNA barcode sequences to dedicated databases and submit occurrence data and links to a web site (). Taxonomic determinations can be shared with a crowdsourcing comments feature, and researchers can discover specimens of interest available for loan and request aliquots of genomic DNA extract. To demonstrate the value of the cyberdiversity framework, we reconcile data from three rapid structured inventories of spiders conducted in Vietnam with an independent inventory (Doi Inthanon, Thailand) using online image libraries. Species richness and inventory completeness were assessed using non-parametric estimators. Community similarity was evaluated using a novel index based on the Jaccard replacing observed with estimated values to correct for unobserved species. We use a distance-decay framework to demonstrate a rudimentary model of landscape-scale changes in community composition that will become increasingly informative as additional inventories participate. With broader adoption of the cyberdiversity approach, networks of information-sharing taxonomists can more efficiently and effectively address taxonomic impediments while elucidating landscape scale patterns of biodiversity. [ABSTRACT FROM AUTHOR]

The honeybee (Apis mellifera) waggle dance, which is performed inside the hive by forager bees, informs hive mates about a potent food source, and recruits them to its location. It consists of a repeated figure-8 pattern: two oppositely directed turns interspersed by a short straight segment, the “waggle run”. The waggle run consists of a single stride emphasized by lateral waggling motions of the abdomen. Directional information pointing to a food source relative to the sun's azimuth is encoded in the angle between the waggle run line and a reference line, which is generally thought to be established by gravity. Yet, there is tantalizing evidence that the local (ambient) geomagnetic field (LGMF) could play a role. We tested the effect of the LGMF on the recruitment success of forager bees by placing observation hives inside large Helmholtz coils, and then either reducing the LGMF to 2% or shifting its apparent declination. Neither of these treatments reduced the number of nest mates that waggle dancing forager bees recruited to a feeding station located 200 m north of the hive. These results indicate that the LGMF does not act as the reference for the alignment of waggle-dancing bees. [ABSTRACT FROM AUTHOR]

Complex ecological and epidemiological systems require multidisciplinary and innovative research. Low cost unmanned aircraft systems (UAS) can provide information on the spatial pattern of hosts’ distribution and abundance, which is crucial as regards modelling the determinants of disease transmission and persistence on a fine spatial scale. In this context we have studied the spatial epidemiology of tuberculosis (TB) in the ungulate community of Doñana National Park (South-western Spain) by modelling species host (red deer, fallow deer and cattle) abundance at fine spatial scale. The use of UAS high-resolution images has allowed us to collect data to model the environmental determinants of host abundance, and in a further step to evaluate their relationships with the spatial risk of TB throughout the ungulate community. We discuss the ecological, epidemiological and logistic conditions under which UAS may contribute to study the wildlife/livestock sanitary interface, where the spatial aggregation of hosts becomes crucial. These findings are relevant for planning and implementing research, fundamentally when managing disease in multi-host systems, and focusing on risky areas. Therefore, managers should prioritize the implementation of control strategies to reduce disease of conservation, economic and social relevance. [ABSTRACT FROM AUTHOR]

Reversing anthropogenic impacts on habitat structure is frequently successful through restoration, but the mechanisms linking habitat change, community reassembly and recovery of ecosystem functioning remain unknown. We test for the influence of edge effects and matrix habitat restoration on the reassembly of dung beetle communities and consequent recovery of dung removal rates across tropical forest edges. Using path modelling, we disentangle the relative importance of community-weighted trait means and functional trait dispersion from total biomass effects on rates of dung removal. Community trait composition and biomass of dung beetle communities responded divergently to edge effects and matrix habitat restoration, yielding opposing effects on dung removal. However, functional dispersion—used in this study as a measure of niche complementarity—did not explain a significant amount of variation in dung removal rates across habitat edges. Instead, we demonstrate that the path to functional recovery of these altered ecosystems depends on the trait-mean composition of reassembling communities, over and above purely biomass-dependent processes that would be expected under neutral theory. These results suggest that any ability to manage functional recovery of ecosystems during habitat restoration will demand knowledge of species' roles in ecosystem processes. [ABSTRACT FROM AUTHOR]

Habitat destruction and overhunting are two major drivers of mammal population declines and extinctions in tropical forests. The construction of roads can be a catalyst for these two threats. In Southeast Asia, the impacts of roads on mammals have not been well-documented at a regional scale. Before evidence-based conservation strategies can be developed to minimize the threat of roads to endangered mammals within this region, we first need to locate where and how roads are contributing to the conversion of their habitats and illegal hunting in each country. We interviewed 36 experts involved in mammal research from seven Southeast Asian countries to identify roads that are contributing the most, in their opinion, to habitat conversion and illegal hunting. Our experts highlighted 16 existing and eight planned roads - these potentially threaten 21% of the 117 endangered terrestrial mammals in those countries. Apart from gathering qualitative evidence from the literature to assess their claims, we demonstrate how species-distribution models, satellite imagery and animal-sign surveys can be used to provide quantitative evidence of roads causing impacts by (1) cutting through habitats where endangered mammals are likely to occur, (2) intensifying forest conversion, and (3) contributing to illegal hunting and wildlife trade. To our knowledge, ours is the first study to identify specific roads threatening endangered mammals in Southeast Asia. Further through highlighting the impacts of roads, we propose 10 measures to limit road impacts in the region. [ABSTRACT FROM AUTHOR]

Mast-seeding species exhibit not only a large inter-annual variability in seed production but also considerable variability among individuals within the same year. However, very little is known about the causes and consequences for population dynamics of this potentially large between-individual variability. Here, we quantified seed production over ten consecutive years in two Mediterranean oak species – the deciduous Quercus canariensis and the evergreen Q. suber - that coexist in forests of southern Spain. First, we calibrated likelihood models to identify which abiotic and biotic variables best explain the magnitude (hereafter seed productivity) and temporal variation of seed production at the individual level (hereafter CVi), and infer whether reproductive effort results from the available soil resources for the plant or is primarily determined by selectively favoured strategies. Second, we explored the contribution of between-individual variability in seed production as a potential mechanism of satiation for predispersal seed predators. We found that Q. canariensis trees inhabiting moister and more fertile soils were more productive than those growing in more resource-limited sites. Regarding temporal variation, individuals of the two studied oak species inhabiting these resource-rich environments also exhibited larger values of CVi. Interestingly, we detected a satiating effect on granivorous insects at the tree level in Q. suber, which was evident in those years where between-individual variability in acorn production was higher. These findings suggest that individual seed production (both in terms of seed productivity and inter-annual variability) is strongly dependent on soil resource heterogeneity (at least for one of the two studied oak species) with potential repercussions for recruitment and population dynamics. However, other external factors (such as soil heterogeneity in pathogen abundance) or certain inherent characteristics of the tree might be also involved in this process. [ABSTRACT FROM AUTHOR]

Understanding the mechanisms that drive population dynamics is fundamental for management of wild populations. The guanaco (Lama guanicoe) is one of two wild camelid species in South America. We evaluated the effects of density dependence and weather variables on population regulation based on a time series of 36 years of population sampling of guanacos in Tierra del Fuego, Chile. The population density varied between 2.7 and 30.7 guanaco/km2, with an apparent monotonic growth during the first 25 years; however, in the last 10 years the population has shown large fluctuations, suggesting that it might have reached its carrying capacity. We used a Bayesian state-space framework and model selection to determine the effect of density and environmental variables on guanaco population dynamics. Our results show that the population is under density dependent regulation and that it is currently fluctuating around an average carrying capacity of 45,000 guanacos. We also found a significant positive effect of previous winter temperature while sheep density has a strong negative effect on the guanaco population growth. We conclude that there are significant density dependent processes and that climate as well as competition with domestic species have important effects determining the population size of guanacos, with important implications for management and conservation. [ABSTRACT FROM AUTHOR]

In the present study, the terminal-restriction fragment length polymorphism (T-RFLP) technique, combined with the use of a clone library, was applied to assess the baseline diversity of fungal endophyte communities associated with rhizomes of Alpinia officinarum Hance, a medicinal plant with a long history of use. A total of 46 distinct T-RFLP fragment peaks were detected using HhaI or MspI mono-digestion-targeted, amplified fungal rDNA ITS sequences from A. officinarum rhizomes. Cloning and sequencing of representative sequences resulted in the detection of members of 10 fungal genera: Pestalotiopsis, Sebacina, Penicillium, Marasmius, Fusarium, Exserohilum, Mycoleptodiscus, Colletotrichum, Meyerozyma, and Scopulariopsis. The T-RFLP profiles revealed an influence of growth year of the host plant on fungal endophyte communities in rhizomes of this plant species; whereas, the geographic location where A. officinarum was grown contributed to only limited variation in the fungal endophyte communities of the host tissue. Furthermore, non-metric multidimensional scaling (NMDS) analysis across all of the rhizome samples showed that the fungal endophyte community assemblages in the rhizome samples could be grouped according to the presence of two types of active indicator chemicals: total volatile oils and galangin. Our present results, for the first time, address a diverse fungal endophyte community is able to internally colonize the rhizome tissue of A. officinarum. The diversity of the fungal endophytes found in the A. officinarum rhizome appeared to be closely correlated with the accumulation of active chemicals in the host plant tissue. The present study also provides the first systematic overview of the fungal endophyte communities in plant rhizome tissue using a culture-independent method. [ABSTRACT FROM AUTHOR]

Biogeography and metacommunity ecology provide two different perspectives on species diversity. Both are spatial in nature but their spatial scales do not necessarily match. With recent boom of metacommunity studies, we see an increasing need for clear discrimination of spatial scales relevant for both perspectives. This discrimination is a necessary prerequisite for improved understanding of ecological phenomena across scales. Here we provide a case study to illustrate some spatial scale-dependent concepts in recent metacommunity studies and identify potential pitfalls. We presented here the diversity patterns of Neotropical lepidopterans and spiders viewed both from metacommunity and biogeographical perspectives. Specifically, we investigated how the relative importance of niche- and dispersal-based processes for community assembly change at two spatial scales: metacommunity scale, i.e. within a locality, and biogeographical scale, i.e. among localities widely scattered along a macroclimatic gradient. As expected, niche-based processes dominated the community assembly at metacommunity scale, while dispersal-based processes played a major role at biogeographical scale for both taxonomical groups. However, we also observed small but significant spatial effects at metacommunity scale and environmental effects at biogeographical scale. We also observed differences in diversity patterns between the two taxonomical groups corresponding to differences in their dispersal modes. Our results thus support the idea of continuity of processes interactively shaping diversity patterns across scales and emphasize the necessity of integration of metacommunity and biogeographical perspectives. [ABSTRACT FROM AUTHOR]

The majority of terrestrial biomass is wood, but the elemental composition of its potential consumers, xylophages, differs hugely from that of wood. This causes a severe nutritional imbalance. We studied the stoichiometric relationships of 11 elements (C, N, P, K, Ca, Mg, Fe, Zn, Mn, Cu, Na) in three species of pine-xylem-feeding insects, Stictoleptura rubra, Arhopalus rusticus (Coleoptera, Cerambycidae) and Chalcophora mariana (Coleoptera, Buprestidae), to elucidate their mechanisms of tissue growth and to match their life histories to their dietary constraints. These beetles do not differ from other Coleoptera in their absolute elemental compositions, which are approximately 1000 (N), 100 (P, Cu) and 50 (K, Na) times higher than in dead but undecayed pine wood. This discrepancy diminishes along the wood decay gradient, but the elemental concentrations remain higher by an order of magnitude in beetles than in highly decayed wood. Numerical simulation of the life history of S. rubra shows that feeding on nutrient-poor undecayed wood would extend its development time to implausible values, whereas feeding on highly decomposed wood (heavily infected with fungi) would barely balance its nutritional budget during the long development period of this species. The changes in stoichiometry indicate that the relative change in the nutrient levels in decaying wood cannot be attributed solely to carbon loss resulting from decomposer respiration: the action of fungi substantially enriches the decaying wood with nutritional elements imported from the outside of the system, making it a suitable food for wood-eating invertebrates. [ABSTRACT FROM AUTHOR]

The role of forest plantations in biodiversity conservation has gained more attention in recent years. However, most work on evaluating the diversity of forest plantations focuses only on one spatial scale; thus, we examined the effects of sampling scale on diversity in forest plantations. We designed a hierarchical sampling strategy to collect data on woody species diversity in planted pine (Pinus tabuliformis Carr.), planted larch (Larix principis-rupprechtii Mayr.), and natural secondary deciduous broadleaf forests in a mountainous region of Beijing, China. Additive diversity partition analysis showed that, compared to natural forests, the planted pine forests had a different woody species diversity partitioning pattern at multi-scales (except the Simpson diversity in the regeneration layer), while the larch plantations did not show multi-scale diversity partitioning patterns that were obviously different from those in the natural secondary broadleaf forest. Compare to the natural secondary broadleaf forests, the effects of planted pine forests on woody species diversity are dependent on the sampling scale and layers selected for analysis. Diversity in the planted larch forest, however, was not significantly different from that in the natural forest for all diversity components at all sampling levels. Our work demonstrated that the species selected for afforestation and the sampling scales selected for data analysis alter the conclusions on the levels of diversity supported by plantations. We suggest that a wide range of scales should be considered in the evaluation of the role of forest plantations on biodiversity conservation. [ABSTRACT FROM AUTHOR]