102 results on '"Sidhu C"'
Search Results
2. Pollination supply models from a local to global scale
- Author
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Giménez-García, Angel, primary, Allen-Perkins, Alfonso, additional, Bartomeus, Ignasi, additional, Balbi, Stefano, additional, Knapp, Jessica L., additional, Hevia, Violeta, additional, Woodcock, Ben Alex, additional, Smagghe, Guy, additional, Miñarro, Marcos, additional, Eeraerts, Maxime, additional, Colville, Jonathan F., additional, Hipólito, Juliana, additional, Cavigliasso, Pablo, additional, Nates-Parra, Guiomar, additional, Herrera, José M., additional, Cusser, Sarah, additional, Simmons, Benno I., additional, Wolters, Volkmar, additional, Jha, Shalene, additional, Freitas, Breno M., additional, Horgan, Finbarr G., additional, Artz, Derek R., additional, Sidhu, C. Sheena, additional, Otieno, Mark, additional, Boreux, Virginie, additional, Biddinger, David J., additional, Klein, Alexandra-Maria, additional, Joshi, Neelendra K., additional, Stewart, Rebecca I. A., additional, Albrecht, Matthias, additional, Nicholson, Charlie C., additional, O'Reilly, Alison D., additional, Crowder, David William, additional, Burns, Katherine L. W., additional, Nabaes Jodar, Diego Nicolás, additional, Garibaldi, Lucas Alejandro, additional, Sutter, Louis, additional, Dupont, Yoko L., additional, Dalsgaard, Bo, additional, da Encarnação Coutinho, Jeferson Gabriel, additional, Lázaro, Amparo, additional, Andersson, Georg K. S., additional, Raine, Nigel E., additional, Krishnan, Smitha, additional, Dainese, Matteo, additional, van der Werf, Wopke, additional, Smith, Henrik G., additional, and Magrach, Ainhoa, additional
- Published
- 2023
- Full Text
- View/download PDF
3. Distribution and characterization of wild bee nesting sites on San Clemente Island, California Channel Islands
- Author
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Sidhu, C. Sheena and Rankin, Erin E. Wilson
- Published
- 2018
4. Proposed quality indicators and recommended standard reporting items in performance of EBUS bronchoscopy: An official World Association for Bronchology and Interventional Pulmonology Expert Panel consensus statement.
- Author
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Steinfort, D.P., Evison, M., Witt, A., Tsaknis, G., Kheir, F., Manners, D., Madan, K., Sidhu, C., Fantin, A., Korevaar, D.A., Heijden, E. van der, Steinfort, D.P., Evison, M., Witt, A., Tsaknis, G., Kheir, F., Manners, D., Madan, K., Sidhu, C., Fantin, A., Korevaar, D.A., and Heijden, E. van der
- Abstract
01 augustus 2023, Contains fulltext : 294974.pdf (Publisher’s version ) (Open Access), BACKGROUND: Since their introduction, both linear and radial endobronchial ultrasound (EBUS) have become an integral component of the practice of Pulmonology and Thoracic Oncology. The quality of health care can be measured by comparing the performance of an individual or a health service with an ideal threshold or benchmark. The taskforce sought to evaluate quality indicators in EBUS bronchoscopy based on clinical relevance/importance and on the basis that observed significant variation in outcomes indicates potential for improvement in health care outcomes. METHODS: A comprehensive literature review informed the composition of a comprehensive list of candidate quality indicators in EBUS. A multiple-round modified Delphi consensus process was subsequently performed with the aim of reaching consensus over a final list of quality indicators and performance targets for these indicators. Standard reporting items were developed, with a strong preference for items where evidence demonstrates a relationship with quality indicator outcomes. RESULTS: Twelve quality Indicators are proposed, with performance targets supported by evidence from the literature. Standardized reporting items for both radial and linear EBUS are recommended, with evidence supporting their utility in assessing procedural outcomes presented. CONCLUSION: This statement is intended to provide a framework for individual proceduralists to assess the quality of EBUS they provide their patients through the identification of clinically relevant, feasible quality measures. Emphasis is placed on outcome measures, with a preference for consistent terminology to allow communication and benchmarking between centres.
- Published
- 2023
5. Pollination supply models from a local to global scale
- Author
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Giménez-García, Angel, Allen-Perkins, Alfonso, Bartomeus, Ignasi, Balbi, Stefano, Knapp, Jessica L., Hevia, Violeta, Woodcock, Ben Alex, Smagghe, Guy, Miñarro, Marcos, Eeraerts, Maxime, Colville, Jonathan F., Hipólito, Juliana, Cavigliasso, Pablo, Nates-Parra, Guiomar, Herrera, José M., Cusser, Sarah, Simmons, Benno I., Wolters, Volkmar, Jha, Shalene, Freitas, Breno M., Horgan, Finbarr G., Artz, Derek R., Sidhu, C. Sheena, Otieno, Mark, Boreux, Virginie, Biddinger, David J., Klein, Alexandra-Maria, Joshi, Neelendra K., Stewart, Rebecca I.A., Albrecht, Matthias, Nicholson, Charlie C., O'Reilly, Alison D., Crowder, David William, Burns, Katherine L.W., Nabaes Jodar, Diego Nicolás, Garibaldi, Lucas Alejandro, Sutter, Louis, Dupont, Yoko L., Dalsgaard, Bo, da Encarnação Coutinho, Jeferson Gabriel, Lázaro, Amparo, Andersson, Georg K.S., Raine, Nigel E., Krishnan, Smitha, Dainese, Matteo, van der Werf, Wopke, Smith, Henrik G., Magrach, Ainhoa, Giménez-García, Angel, Allen-Perkins, Alfonso, Bartomeus, Ignasi, Balbi, Stefano, Knapp, Jessica L., Hevia, Violeta, Woodcock, Ben Alex, Smagghe, Guy, Miñarro, Marcos, Eeraerts, Maxime, Colville, Jonathan F., Hipólito, Juliana, Cavigliasso, Pablo, Nates-Parra, Guiomar, Herrera, José M., Cusser, Sarah, Simmons, Benno I., Wolters, Volkmar, Jha, Shalene, Freitas, Breno M., Horgan, Finbarr G., Artz, Derek R., Sidhu, C. Sheena, Otieno, Mark, Boreux, Virginie, Biddinger, David J., Klein, Alexandra-Maria, Joshi, Neelendra K., Stewart, Rebecca I.A., Albrecht, Matthias, Nicholson, Charlie C., O'Reilly, Alison D., Crowder, David William, Burns, Katherine L.W., Nabaes Jodar, Diego Nicolás, Garibaldi, Lucas Alejandro, Sutter, Louis, Dupont, Yoko L., Dalsgaard, Bo, da Encarnação Coutinho, Jeferson Gabriel, Lázaro, Amparo, Andersson, Georg K.S., Raine, Nigel E., Krishnan, Smitha, Dainese, Matteo, van der Werf, Wopke, Smith, Henrik G., and Magrach, Ainhoa
- Abstract
Ecological intensification has been embraced with great interest by the academic sector but is still rarely taken up by farmers because monitoring the state of different ecological functions is not straightforward. Modelling tools can represent a more accessible alternative of measuring ecological functions, which could help promote their use amongst farmers and other decision-makers. In the case of crop pollination, modelling has traditionally followed either a mechanistic or a data-driven approach. Mechanistic models simulate the habitat preferences and foraging behaviour of pollinators, while data-driven models associate georeferenced variables with real observations. Here, we test these two approaches to predict pollination supply and validate these predictions using data from a newly released global dataset on pollinator visitation rates to different crops. We use one of the most extensively used models for the mechanistic approach, while for the data-driven approach, we select from among a comprehensive set of state-of-the-art machine-learning models. Moreover, we explore a mixed approach, where data-derived inputs, rather than expert assessment, inform the mechanistic model. We find that, at a global scale, machine-learning models work best, offering a rank correlation coefficient between predictions and observations of pollinator visitation rates of 0.56. In turn, the mechanistic model works moderately well at a global scale for wild bees other than bumblebees. Biomes characterized by temperate or Mediterranean forests show a better agreement between mechanistic model predictions and observations, probably due to more comprehensive ecological knowledge and therefore better parameterization of input variables for these biomes. This study highlights the challenges of transferring input variables across multiple biomes, as expected given the different composition of species in different biomes. Our results provide clear guidance on which pollination supply mode
- Published
- 2023
6. Pollination supply models from a local to global scale
- Author
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Agencia Estatal de Investigación (España), Eusko Jaurlaritza, Comunidad de Madrid, European Commission, Universidad Politécnica de Madrid, Research Foundation - Flanders, Ministerio de Economía y Competitividad (España), Ministerio de Universidades (España), Fundação para a Ciência e a Tecnologia (Portugal), Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Department of Agriculture (US), German Research Foundation, Irish Research Council, Swedish Research Council, Giménez-García, Ángel, Allen-Perkins, Alfonso, Bartomeus, Ignasi, Balbi, Stefano, Knapp, Jessica L., Hevia, Violeta, Woodcock, Ben Alex, Smagghe, Guy, Miñarro, Marcos, Eeraerts, Maxime, Colville, Jonathan F., Hipólito, Juliana, Cavigliasso, Pablo, Nates-Parra, Guiomar, Herrera, José M., Cusser, Sarah, Simmons, Benno I., Wolters, Volkmar, Jha, Shalene, Freitas, Breno M., Horgan, Finbarr G., Artz, Derek R., Sidhu, C. Sheena, Otieno, Mark, Boreux, Virginie, Biddinger, David J., Klein, Alexandra Maria, Joshi, Neelendra K., Stewart, Rebecca I.A., Albrecht, Matthias, Nicholson, Charlie C., O'Reilly, Alison D., Crowder, David William, Burns, Katherine L.W., Nabaes Jodar, Diego Nicolás, Garibaldi, Lucas Alejandro, Sutter, Louis, Dupont, Yoko L., Dalsgaard, Bo, Da Encarnação Coutinho, Jeferson Gabriel, Lázaro, Amparo, Andersson, Georg K. S., Raine, Nigel E., Krishnan, Smitha, Dainese, Matteo, Van Der Werf, Wopke, Smith, Henrik G., Magrach, Ainhoa, Agencia Estatal de Investigación (España), Eusko Jaurlaritza, Comunidad de Madrid, European Commission, Universidad Politécnica de Madrid, Research Foundation - Flanders, Ministerio de Economía y Competitividad (España), Ministerio de Universidades (España), Fundação para a Ciência e a Tecnologia (Portugal), Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Department of Agriculture (US), German Research Foundation, Irish Research Council, Swedish Research Council, Giménez-García, Ángel, Allen-Perkins, Alfonso, Bartomeus, Ignasi, Balbi, Stefano, Knapp, Jessica L., Hevia, Violeta, Woodcock, Ben Alex, Smagghe, Guy, Miñarro, Marcos, Eeraerts, Maxime, Colville, Jonathan F., Hipólito, Juliana, Cavigliasso, Pablo, Nates-Parra, Guiomar, Herrera, José M., Cusser, Sarah, Simmons, Benno I., Wolters, Volkmar, Jha, Shalene, Freitas, Breno M., Horgan, Finbarr G., Artz, Derek R., Sidhu, C. Sheena, Otieno, Mark, Boreux, Virginie, Biddinger, David J., Klein, Alexandra Maria, Joshi, Neelendra K., Stewart, Rebecca I.A., Albrecht, Matthias, Nicholson, Charlie C., O'Reilly, Alison D., Crowder, David William, Burns, Katherine L.W., Nabaes Jodar, Diego Nicolás, Garibaldi, Lucas Alejandro, Sutter, Louis, Dupont, Yoko L., Dalsgaard, Bo, Da Encarnação Coutinho, Jeferson Gabriel, Lázaro, Amparo, Andersson, Georg K. S., Raine, Nigel E., Krishnan, Smitha, Dainese, Matteo, Van Der Werf, Wopke, Smith, Henrik G., and Magrach, Ainhoa
- Abstract
Ecological intensification has been embraced with great interest by the academic sector but is still rarely taken up by farmers because monitoring the state of different ecological functions is not straightforward. Modelling tools can represent a more accessible alternative of measuring ecological functions, which could help promote their use amongst farmers and other decision-makers. In the case of crop pollination, modelling has traditionally followed either a mechanistic or a data-driven approach. Mechanistic models simulate the habitat preferences and foraging behaviour of pollinators, while data-driven models associate georeferenced variables with real observations. Here, we test these two approaches to predict pollination supply and validate these predictions using data from a newly released global dataset on pollinator visitation rates to different crops. We use one of the most extensively used models for the mechanistic approach, while for the data-driven approach, we select from among a comprehensive set of state-of-The-Art machine-learning models. Moreover, we explore a mixed approach, where data-derived inputs, rather than expert assessment, inform the mechanistic model. We find that, at a global scale, machine-learning models work best, offering a rank correlation coefficient between predictions and observations of pollinator visitation rates of 0.56. In turn, the mechanistic model works moderately well at a global scale for wild bees other than bumblebees. Biomes characterized by temperate or Mediterranean forests show a better agreement between mechanistic model predictions and observations, probably due to more comprehensive ecological knowledge and therefore better parameterization of input variables for these biomes. This study highlights the challenges of transferring input variables across multiple biomes, as expected given the different composition of species in different biomes. Our results provide clear guidance on which pollination supply mode
- Published
- 2023
7. Pollination Ecology of Island Endemic Plants: A Case Study on the California Channel Islands
- Author
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Sidhu, C. Sheena, primary, Lozano, Giselle E., additional, Miner, Michelle C., additional, Howe, Emily, additional, and Wilson-Rankin, Erin E., additional
- Published
- 2022
- Full Text
- View/download PDF
8. MT9 US Payer Management of Digital Therapeutics and Future Outlook
- Author
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Sidhu, C, primary, Waththuhewa, M, additional, and Sullivan, N, additional
- Published
- 2022
- Full Text
- View/download PDF
9. CropPol: a dynamic, open and global database on crop pollination
- Author
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Allen-Perkins, Alfonso, Magrach, Ainhoa, Dainese, Matteo, Garibaldi, Lucas A., Kleijn, David, Rader, Romina, Reilly, James R., Winfree, Rachael, Lundin, Ola, McGrady, Carley M., Brittain, Claire, Biddinger, David J., Artz, Derek R., Elle, Elizabeth, Hoffman, George, Ellis, James D., Daniels, Jaret, Gibbs, Jason, Campbell, Joshua W., Brokaw, Julia, Wilson, Julianna K., Mason, Keith, Ward, Kimiora L., Gundersen, Knute B., Bobiwash, Kyle, Gut, Larry, Rowe, Logan M., Boyle, Natalie K., Williams, Neal M., Joshi, Neelendra K., Rothwell, Nikki, Gillespie, Robert L., Isaacs, Rufus, Fleischer, Shelby J., Peterson, Stephen S., Rao, Sujaya, Pitts-Singer, Theresa L., Fijen, Thijs, Boreux, Virginie, Rundlöf, Maj, Viana, Blandina Felipe, Klein, Alexandra-Maria, Smith, Henrik G., Bommarco, Riccardo, Carvalheiro, Luísa G., Ricketts, Taylor H., Ghazoul, Jaboury, Krishnan, Smitha, Benjamin, Faye E., Loureiro, João, Castro, Sílvia, Raine, Nigel E., de Groot, Gerard Arjen, Horgan, Finbarr G., Hipólito, Juliana, Smagghe, Guy, Meeus, Ivan, Eeraerts, Maxime, Potts, Simon G., Kremen, Claire, García, Daniel, Miñarro, Marcos, Crowder, David W., Pisanty, Gideon, Mandelik, Yael, Vereecken, Nicolas J., Leclercq, Nicolas, Weekers, Timothy, Lindstrom, Sandra A. M., Stanley, Dara A., Zaragoza-Trello, Carlos, Nicholson, Charlie C., Scheper, Jeroen, Rad, Carlos, Marks, Evan A. N., Mota, Lucie, Danforth, Bryan, Park, Mia, Bezerra, Antônio Diego M., Freitas, Breno M., Mallinger, Rachel E., da Silva, Fabiana Oliveira, Willcox, Bryony, Ramos, Davi L., da Silva e Silva, Felipe D., Lázaro, Amparo, Alomar, David, González-Estévez, Miguel A., Taki, Hisatomo, Cariveau, Daniel P., Garratt, Michael P. D., Nabaes Jodar, Diego N., Stewart, Rebecca I. A., Ariza, Daniel, Pisman, Matti, Lichtenberg, Elinor M., Schüepp, Christof, Herzog, Felix, Entling, Martin H., Dupont, Yoko L., Michener, Charles D., Daily, Gretchen C., Ehrlich, Paul R., Burns, Katherine L. W., Vilà, Montserrat, Robson, Andrew, Howlett, Brad, Blechschmidt, Leah, Jauker, Frank, Schwarzbach, Franziska, Nesper, Maike, Diekötter, Tim, Wolters, Volkmar, Castro, Helena, Gaspar, Hugo, Nault, Brian A., Badenhausser, Isabelle, Petersen, Jessica D., Tscharntke, Teja, Bretagnolle, Vincent, Chan, D. Susan Willis, Chacoff, Natacha, Andersson, Georg K. S., Jha, Shalene, Colville, Jonathan F., Veldtman, Ruan, Coutinho, Jeferson, Bianchi, Felix J. J. A., Sutter, Louis, Albrecht, Matthias, Jeanneret, Philippe, Zou, Yi, Averill, Anne L., Saez, Agustin, Sciligo, Amber R., Vergara, Carlos H., Bloom, Elias H., Oeller, Elisabeth, Badano, Ernesto I., Loeb, Gregory M., Grab, Heather, Ekroos, Johan, Gagic, Vesna, Cunningham, Saul A., Aström, Jens, Cavigliasso, Pablo, Trillo, Alejandro, Classen, Alice, Mauchline, Alice L., Montero-Castaño, Ana, Wilby, Andrew, Woodcock, Ben A., Sidhu, C. Sheena, Steffan-Dewenter, Ingolf, Vogiatzakis, Ioannis N., Herrera, José M., Otieno, Mark, Gikungu, Mary W., Cusser, Sarah J., Nauss, Thomas, Nilsson, Lovisa, Knapp, Jessica, Ortega-Marcos, Jorge J., González, José A., Osborne, Juliet L., Blanche, Rosalind, Shaw, Rosalind F., Hevia, Violeta, Stout, Jane, Arthur, Anthony D., Blochtein, Betina, Szentgyorgyi, Hajnalka, Li, Jin, Mayfield, Margaret M., Woyciechowski, Michał, Nunes-Silva, Patrícia, de Oliveira, Rosana Halinski, Henry, Steve, Simmons, Benno I., Dalsgaard, Bo, Hansen, Katrine, Sritongchuay, Tuanjit, O'Reilly, Alison D., García, Fermín José Chamorro, Parra, Guiomar Nates, Pigozo, Camila Magalhães, Bartomeus, Ignasi, Allen-Perkins, Alfonso, Magrach, Ainhoa, Dainese, Matteo, Garibaldi, Lucas A., Kleijn, David, Rader, Romina, Reilly, James R., Winfree, Rachael, Lundin, Ola, McGrady, Carley M., Brittain, Claire, Biddinger, David J., Artz, Derek R., Elle, Elizabeth, Hoffman, George, Ellis, James D., Daniels, Jaret, Gibbs, Jason, Campbell, Joshua W., Brokaw, Julia, Wilson, Julianna K., Mason, Keith, Ward, Kimiora L., Gundersen, Knute B., Bobiwash, Kyle, Gut, Larry, Rowe, Logan M., Boyle, Natalie K., Williams, Neal M., Joshi, Neelendra K., Rothwell, Nikki, Gillespie, Robert L., Isaacs, Rufus, Fleischer, Shelby J., Peterson, Stephen S., Rao, Sujaya, Pitts-Singer, Theresa L., Fijen, Thijs, Boreux, Virginie, Rundlöf, Maj, Viana, Blandina Felipe, Klein, Alexandra-Maria, Smith, Henrik G., Bommarco, Riccardo, Carvalheiro, Luísa G., Ricketts, Taylor H., Ghazoul, Jaboury, Krishnan, Smitha, Benjamin, Faye E., Loureiro, João, Castro, Sílvia, Raine, Nigel E., de Groot, Gerard Arjen, Horgan, Finbarr G., Hipólito, Juliana, Smagghe, Guy, Meeus, Ivan, Eeraerts, Maxime, Potts, Simon G., Kremen, Claire, García, Daniel, Miñarro, Marcos, Crowder, David W., Pisanty, Gideon, Mandelik, Yael, Vereecken, Nicolas J., Leclercq, Nicolas, Weekers, Timothy, Lindstrom, Sandra A. M., Stanley, Dara A., Zaragoza-Trello, Carlos, Nicholson, Charlie C., Scheper, Jeroen, Rad, Carlos, Marks, Evan A. N., Mota, Lucie, Danforth, Bryan, Park, Mia, Bezerra, Antônio Diego M., Freitas, Breno M., Mallinger, Rachel E., da Silva, Fabiana Oliveira, Willcox, Bryony, Ramos, Davi L., da Silva e Silva, Felipe D., Lázaro, Amparo, Alomar, David, González-Estévez, Miguel A., Taki, Hisatomo, Cariveau, Daniel P., Garratt, Michael P. D., Nabaes Jodar, Diego N., Stewart, Rebecca I. A., Ariza, Daniel, Pisman, Matti, Lichtenberg, Elinor M., Schüepp, Christof, Herzog, Felix, Entling, Martin H., Dupont, Yoko L., Michener, Charles D., Daily, Gretchen C., Ehrlich, Paul R., Burns, Katherine L. W., Vilà, Montserrat, Robson, Andrew, Howlett, Brad, Blechschmidt, Leah, Jauker, Frank, Schwarzbach, Franziska, Nesper, Maike, Diekötter, Tim, Wolters, Volkmar, Castro, Helena, Gaspar, Hugo, Nault, Brian A., Badenhausser, Isabelle, Petersen, Jessica D., Tscharntke, Teja, Bretagnolle, Vincent, Chan, D. Susan Willis, Chacoff, Natacha, Andersson, Georg K. S., Jha, Shalene, Colville, Jonathan F., Veldtman, Ruan, Coutinho, Jeferson, Bianchi, Felix J. J. A., Sutter, Louis, Albrecht, Matthias, Jeanneret, Philippe, Zou, Yi, Averill, Anne L., Saez, Agustin, Sciligo, Amber R., Vergara, Carlos H., Bloom, Elias H., Oeller, Elisabeth, Badano, Ernesto I., Loeb, Gregory M., Grab, Heather, Ekroos, Johan, Gagic, Vesna, Cunningham, Saul A., Aström, Jens, Cavigliasso, Pablo, Trillo, Alejandro, Classen, Alice, Mauchline, Alice L., Montero-Castaño, Ana, Wilby, Andrew, Woodcock, Ben A., Sidhu, C. Sheena, Steffan-Dewenter, Ingolf, Vogiatzakis, Ioannis N., Herrera, José M., Otieno, Mark, Gikungu, Mary W., Cusser, Sarah J., Nauss, Thomas, Nilsson, Lovisa, Knapp, Jessica, Ortega-Marcos, Jorge J., González, José A., Osborne, Juliet L., Blanche, Rosalind, Shaw, Rosalind F., Hevia, Violeta, Stout, Jane, Arthur, Anthony D., Blochtein, Betina, Szentgyorgyi, Hajnalka, Li, Jin, Mayfield, Margaret M., Woyciechowski, Michał, Nunes-Silva, Patrícia, de Oliveira, Rosana Halinski, Henry, Steve, Simmons, Benno I., Dalsgaard, Bo, Hansen, Katrine, Sritongchuay, Tuanjit, O'Reilly, Alison D., García, Fermín José Chamorro, Parra, Guiomar Nates, Pigozo, Camila Magalhães, and Bartomeus, Ignasi
- Abstract
Seventy five percent of the world's food crops benefit from insect pollination. Hence, there has been increased interest in how global change drivers impact this critical ecosystem service. Because standardized data on crop pollination are rarely available, we are limited in our capacity to understand the variation in pollination benefits to crop yield, as well as to anticipate changes in this service, develop predictions, and inform management actions. Here, we present CropPol, a dynamic, open and global database on crop pollination. It contains measurements recorded from 202 crop studies, covering 3,394 field observations, 2,552 yield measurements (i.e. berry weight, number of fruits and kg per hectare, among others), and 47,752 insect records from 48 commercial crops distributed around the globe. CropPol comprises 32 of the 87 leading global crops and commodities that are pollinator dependent. Malus domestica is the most represented crop (32 studies), followed by Brassica napus (22 studies), Vaccinium corymbosum (13 studies), and Citrullus lanatus (12 studies). The most abundant pollinator guilds recorded are honey bees (34.22% counts), bumblebees (19.19%), flies other than Syrphidae and Bombyliidae (13.18%), other wild bees (13.13%), beetles (10.97%), Syrphidae (4.87%), and Bombyliidae (0.05%). Locations comprise 34 countries distributed among Europe (76 studies), Northern America (60), Latin America and the Caribbean (29), Asia (20), Oceania (10), and Africa (7). Sampling spans three decades and is concentrated on 2001-05 (21 studies), 2006-10 (40), 2011-15 (88), and 2016-20 (50). This is the most comprehensive open global data set on measurements of crop flower visitors, crop pollinators and pollination to date, and we encourage researchers to add more datasets to this database in the future. This data set is released for non-commercial use only. Credits should be given to this paper (i.e., proper citation), and the products generated with this database should
- Published
- 2022
10. CropPol:A dynamic, open and global database on crop pollination
- Author
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Allen‐Perkins, Alfonso, Magrach, Ainhoa, Dainese, Matteo, Garibaldi, Lucas A., Kleijn, David, Rader, Romina, Reilly, James R., Winfree, Rachael, Lundin, Ola, McGrady, Carley M., Brittain, Claire, Biddinger, David J., Artz, Derek R., Elle, Elizabeth, Hoffman, George, Ellis, James D., Daniels, Jaret, Gibbs, Jason, Campbell, Joshua W., Brokaw, Julia, Wilson, Julianna K., Mason, Keith, Ward, Kimiora L., Gundersen, Knute B., Bobiwash, Kyle, Gut, Larry, Rowe, Logan M., Boyle, Natalie K., Williams, Neal M., Joshi, Neelendra K., Rothwell, Nikki, Gillespie, Robert L., Isaacs, Rufus, Fleischer, Shelby J., Peterson, Stephen S., Rao, Sujaya, Pitts‐Singer, Theresa L., Fijen, Thijs, Boreux, Virginie, Rundlöf, Maj, Viana, Blandina Felipe, Klein, Alexandra‐Maria, Smith, Henrik G., Bommarco, Riccardo, Carvalheiro, Luísa G., Ricketts, Taylor H., Ghazoul, Jaboury, Krishnan, Smitha, Benjamin, Faye E., Loureiro, João, Castro, Sílvia, Raine, Nigel E., Groot, Gerard Arjen, Horgan, Finbarr G., Hipólito, Juliana, Smagghe, Guy, Meeus, Ivan, Eeraerts, Maxime, Potts, Simon G., Kremen, Claire, García, Daniel, Miñarro, Marcos, Crowder, David W., Pisanty, Gideon, Mandelik, Yael, Vereecken, Nicolas J., Leclercq, Nicolas, Weekers, Timothy, Lindstrom, Sandra A. M., Stanley, Dara A., Zaragoza‐Trello, Carlos, Nicholson, Charlie C., Scheper, Jeroen, Rad, Carlos, Marks, Evan A. N., Mota, Lucie, Danforth, Bryan, Park, Mia, Bezerra, Antônio Diego M., Freitas, Breno M., Mallinger, Rachel E., Oliveira da Silva, Fabiana, Willcox, Bryony, Ramos, Davi L., D. da Silva e Silva, Felipe, Lázaro, Amparo, Alomar, David, González‐Estévez, Miguel A., Taki, Hisatomo, Cariveau, Daniel P., Garratt, Michael P. D., Nabaes Jodar, Diego N., Stewart, Rebecca I. A., Ariza, Daniel, Pisman, Matti, Lichtenberg, Elinor M., Schüepp, Christof, Herzog, Felix, Entling, Martin H., Dupont, Yoko L., Michener, Charles D., Daily, Gretchen C., Ehrlich, Paul R., Burns, Katherine L. W., Vilà, Montserrat, Robson, Andrew, Howlett, Brad, Blechschmidt, Leah, Jauker, Frank, Schwarzbach, Franziska, Nesper, Maike, Diekötter, Tim, Wolters, Volkmar, Castro, Helena, Gaspar, Hugo, Nault, Brian A., Badenhausser, Isabelle, Petersen, Jessica D., Tscharntke, Teja, Bretagnolle, Vincent, Willis Chan, D. Susan, Chacoff, Natacha, Andersson, Georg K. S., Jha, Shalene, Colville, Jonathan F., Veldtman, Ruan, Coutinho, Jeferson, Bianchi, Felix J. J. A., Sutter, Louis, Albrecht, Matthias, Jeanneret, Philippe, Zou, Yi, Averill, Anne L., Saez, Agustin, Sciligo, Amber R., Vergara, Carlos H., Bloom, Elias H., Oeller, Elisabeth, Badano, Ernesto I., Loeb, Gregory M., Grab, Heather, Ekroos, Johan, Gagic, Vesna, Cunningham, Saul A., Åström, Jens, Cavigliasso, Pablo, Trillo, Alejandro, Classen, Alice, Mauchline, Alice L., Montero‐Castaño, Ana, Wilby, Andrew, Woodcock, Ben A., Sidhu, C. Sheena, Steffan‐Dewenter, Ingolf, Vogiatzakis, Ioannis N., Herrera, José M., Otieno, Mark, Gikungu, Mary W., Cusser, Sarah J., Nauss, Thomas, Nilsson, Lovisa, Knapp, Jessica, Ortega‐Marcos, Jorge J., González, José A., Osborne, Juliet L., Blanche, Rosalind, Shaw, Rosalind F., Hevia, Violeta, Stout, Jane, Arthur, Anthony D., Blochtein, Betina, Szentgyorgyi, Hajnalka, Li, Jin, Mayfield, Margaret M., Woyciechowski, Michał, Nunes‐Silva, Patrícia, Halinski de Oliveira, Rosana, Henry, Steve, Simmons, Benno I., Dalsgaard, Bo, Hansen, Katrine, Sritongchuay, Tuanjit, O'Reilly, Alison D., Chamorro García, Fermín José, Nates Parra, Guiomar, Magalhães Pigozo, Camila, Bartomeus, Ignasi, Allen‐Perkins, Alfonso, Magrach, Ainhoa, Dainese, Matteo, Garibaldi, Lucas A., Kleijn, David, Rader, Romina, Reilly, James R., Winfree, Rachael, Lundin, Ola, McGrady, Carley M., Brittain, Claire, Biddinger, David J., Artz, Derek R., Elle, Elizabeth, Hoffman, George, Ellis, James D., Daniels, Jaret, Gibbs, Jason, Campbell, Joshua W., Brokaw, Julia, Wilson, Julianna K., Mason, Keith, Ward, Kimiora L., Gundersen, Knute B., Bobiwash, Kyle, Gut, Larry, Rowe, Logan M., Boyle, Natalie K., Williams, Neal M., Joshi, Neelendra K., Rothwell, Nikki, Gillespie, Robert L., Isaacs, Rufus, Fleischer, Shelby J., Peterson, Stephen S., Rao, Sujaya, Pitts‐Singer, Theresa L., Fijen, Thijs, Boreux, Virginie, Rundlöf, Maj, Viana, Blandina Felipe, Klein, Alexandra‐Maria, Smith, Henrik G., Bommarco, Riccardo, Carvalheiro, Luísa G., Ricketts, Taylor H., Ghazoul, Jaboury, Krishnan, Smitha, Benjamin, Faye E., Loureiro, João, Castro, Sílvia, Raine, Nigel E., Groot, Gerard Arjen, Horgan, Finbarr G., Hipólito, Juliana, Smagghe, Guy, Meeus, Ivan, Eeraerts, Maxime, Potts, Simon G., Kremen, Claire, García, Daniel, Miñarro, Marcos, Crowder, David W., Pisanty, Gideon, Mandelik, Yael, Vereecken, Nicolas J., Leclercq, Nicolas, Weekers, Timothy, Lindstrom, Sandra A. M., Stanley, Dara A., Zaragoza‐Trello, Carlos, Nicholson, Charlie C., Scheper, Jeroen, Rad, Carlos, Marks, Evan A. N., Mota, Lucie, Danforth, Bryan, Park, Mia, Bezerra, Antônio Diego M., Freitas, Breno M., Mallinger, Rachel E., Oliveira da Silva, Fabiana, Willcox, Bryony, Ramos, Davi L., D. da Silva e Silva, Felipe, Lázaro, Amparo, Alomar, David, González‐Estévez, Miguel A., Taki, Hisatomo, Cariveau, Daniel P., Garratt, Michael P. D., Nabaes Jodar, Diego N., Stewart, Rebecca I. A., Ariza, Daniel, Pisman, Matti, Lichtenberg, Elinor M., Schüepp, Christof, Herzog, Felix, Entling, Martin H., Dupont, Yoko L., Michener, Charles D., Daily, Gretchen C., Ehrlich, Paul R., Burns, Katherine L. W., Vilà, Montserrat, Robson, Andrew, Howlett, Brad, Blechschmidt, Leah, Jauker, Frank, Schwarzbach, Franziska, Nesper, Maike, Diekötter, Tim, Wolters, Volkmar, Castro, Helena, Gaspar, Hugo, Nault, Brian A., Badenhausser, Isabelle, Petersen, Jessica D., Tscharntke, Teja, Bretagnolle, Vincent, Willis Chan, D. Susan, Chacoff, Natacha, Andersson, Georg K. S., Jha, Shalene, Colville, Jonathan F., Veldtman, Ruan, Coutinho, Jeferson, Bianchi, Felix J. J. A., Sutter, Louis, Albrecht, Matthias, Jeanneret, Philippe, Zou, Yi, Averill, Anne L., Saez, Agustin, Sciligo, Amber R., Vergara, Carlos H., Bloom, Elias H., Oeller, Elisabeth, Badano, Ernesto I., Loeb, Gregory M., Grab, Heather, Ekroos, Johan, Gagic, Vesna, Cunningham, Saul A., Åström, Jens, Cavigliasso, Pablo, Trillo, Alejandro, Classen, Alice, Mauchline, Alice L., Montero‐Castaño, Ana, Wilby, Andrew, Woodcock, Ben A., Sidhu, C. Sheena, Steffan‐Dewenter, Ingolf, Vogiatzakis, Ioannis N., Herrera, José M., Otieno, Mark, Gikungu, Mary W., Cusser, Sarah J., Nauss, Thomas, Nilsson, Lovisa, Knapp, Jessica, Ortega‐Marcos, Jorge J., González, José A., Osborne, Juliet L., Blanche, Rosalind, Shaw, Rosalind F., Hevia, Violeta, Stout, Jane, Arthur, Anthony D., Blochtein, Betina, Szentgyorgyi, Hajnalka, Li, Jin, Mayfield, Margaret M., Woyciechowski, Michał, Nunes‐Silva, Patrícia, Halinski de Oliveira, Rosana, Henry, Steve, Simmons, Benno I., Dalsgaard, Bo, Hansen, Katrine, Sritongchuay, Tuanjit, O'Reilly, Alison D., Chamorro García, Fermín José, Nates Parra, Guiomar, Magalhães Pigozo, Camila, and Bartomeus, Ignasi
- Abstract
Seventy five percent of the world's food crops benefit from insect pollination. Hence, there has been increased interest in how global change drivers impact this critical ecosystem service. Because standardized data on crop pollination are rarely available, we are limited in our capacity to understand the variation in pollination benefits to crop yield, as well as to anticipate changes in this service, develop predictions, and inform management actions. Here, we present CropPol, a dynamic, open, and global database on crop pollination. It contains measurements recorded from 202 crop studies, covering 3,394 field observations, 2,552 yield measurements (i.e., berry mass, number of fruits, and fruit density [kg/ha], among others), and 47,752 insect records from 48 commercial crops distributed around the globe. CropPol comprises 32 of the 87 leading global crops and commodities that are pollinator dependent. Malus domestica is the most represented crop (32 studies), followed by Brassica napus (22 studies), Vaccinium corymbosum (13 studies), and Citrullus lanatus (12 studies). The most abundant pollinator guilds recorded are honey bees (34.22% counts), bumblebees (19.19%), flies other than Syrphidae and Bombyliidae (13.18%), other wild bees (13.13%), beetles (10.97%), Syrphidae (4.87%), and Bombyliidae (0.05%). Locations comprise 34 countries distributed among Europe (76 studies), North America (60), Latin America and the Caribbean (29), Asia (20), Oceania (10), and Africa (7). Sampling spans three decades and is concentrated on 2001–2005 (21 studies), 2006–2010 (40), 2011–2015 (88), and 2016–2020 (50). This is the most comprehensive open global data set on measurements of crop flower visitors, crop pollinators and pollination to date, and we encourage researchers to add more datasets to this database in the future. This data set is released for non-commercial use only. Credits should be given to this paper (i.e., proper citation), and the products generated with this da
- Published
- 2022
11. CropPol: A dynamic, open and global database on crop pollination
- Author
-
Belmont Forum, European Commission, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Netherlands Organization for Scientific Research, National Science Foundation (US), Allen, Alfonso, Magrach, Ainhoa, Dainese, Matteo, Garibaldi, Lucas A., Kleijn, David, Rader, Romina, Reilly, James R., Winfree, Rachael, Lundin, Ola, McGrady, Carley M., Brittain, Claire, Halinski, Rosana, Henry, Steve, Simmons, Benno I., Dalsgaard, Bo, Campbell, Joshua W., Hansen, Katrine, Mason, Keith, Ward, Kimiora L., Michener, Charles D., Gundersen, Knute B., Pisman, Matti, Bobiwash, Kyle, Gut, Larry, Rowe, Logan M., Boyle, Natalie K., Williams, Neal M., Joshi, Neelendra K., Rothwell, Nikki, Gillespie, Robert L., Isaacs, Rufus, Daily, Gretchen C., Lichtenberg, Elinor M., Fleischer, Shelby J., Peterson, Stephen S., Rao, Sujaya, Pitts-Singer, Theresa L., Fijen, Thijs, Boreux, Virginie, Rundlöf, Maj, Felipe Viana, Blandina, Klein, Alexandra‐Maria, Smith, Henrik G., Schüepp, Christoff, Ehrlich, Paul R., Bommarco, Riccardo, Carvalheiro, Luísa G., Ricketts, Taylor H., Ghazoul, Jaboury, Krishnan, Smitha, Benjamin, Faye E., Loureiro, João, Castro, Sílvia, Raine, Nigel E., Herzog, Felix, Arjen de Groot, Gerard, Burns, Katherine L. W., Horgan, Finbarr G., Hipólito, Juliana, Smagghe, Guy, Meeus, Ivan, Eeraerts, Maxime, Potts, Simon G., Kremen, Claire, Gómez García, Daniel, Entling, Martin H., Miñarro, Marcos, Crowder, David W., Vilà, Montserrat, Pisanty, Gideon, Mandelik, Yael, Vereecken, Nicolas J., Leclercq, Nicolas, Weekers, Timothy, Lindstrom, Sandra A.M., Stanley, Dara A., Dupont, Yoko L., Zaragoza-Trello, C., Nicholson, Charlie C., Scheper, Jeroen, Robson, Andrew, Rad, Carlos, Marks, Evan A. N., Mota, Lucie, Danforth, Bryan, Park, Mia, Bezerra, Antônio Diego M., Jauker, Frank, Freitas, Breno M., Mallinger, Rachel E., Silva, Fabiana Oliveira da, Willcox, Bryony, Howlett, Brad, Ramos, Davi L., Silva, Felipe D. da Silva e, Lázaro, Amparo, Alomar, David, González-Estévez, Miguel A., Schwarzbach, Franciska, Taki, Hisatomo, Cariveau, Daniel P., Garratt, Michael P. D., Nabaes Jodar, Diego Nicolás, Stewart, Rebecca I. A, Blechschmidt, Leah, Ariza, Daniel, Biddinger, David J., Nesper, Maike, Sritongchuay, Tuanjit, Diekötter, Tim, Wolters, Volkmar, Castro, Helena, Gaspar, Hugo, Nault, Brian A., Badenhausser, Isabelle, Petersen, Jessica D., Tscharntke, Teja, Bretagnolle, Vincent, Artz, Derek R., O'Reilly, Alison D., Willis Chan, D. Susan, Chacoff, Natacha P., Andersson, Georg K. S., Jha, Shalene, Colville, Jonathan F., Veldtman, Ruan, Coutinho, Jeferson, Bianchi, Felix J. J. A., Sutter, Louis, Albrecht, Matthias, Chamorro, Fermín José, Elle, Elizabeth, Jeanneret, Philippe, Zou, Yi, Averill, Anne, Sáez, Agustín, Sciligo, Amber R., Vergara, Carlos H., Bloom, Elias H., Oeller, Elisabeth, Badano, Ernesto I., Nates, Guiomar, Loeb, Gregory M., Hoffman, George, Grab, Heather, Ekroos, Johan, Gagic, Vesna, Cunningham, Saul A., Åström, Jens, Cavigliasso, Pablo, Trillo, Alejandro, Classen, Alice, Pigozo, Camila Magalhães, Mauchline, Alice L., Montero-Castaño, Ana, Ellis, James D., Wilby, Andrew, Woodcock, Ben A., Sidhu, C. Sheena, Steffan-Dewenter, Ingolf, Vogiatzakis, Ioannis N., Herrera, José M., Otieno, Mark, Bartomeus, Ignasi, Gikungu, Mary W., Cusser, Sarah J., Nauss, Thomas, Daniels, Jared, Nilsson, Lovisa, Knapp, Jessica, Ortega-Marcos, Jorge J., González, José A., Osborne, Juliet L., Blanche, Rosalind, Brokaw, Julia, Shaw, Rosalind F., Hevia, Violeta, Stout, Jane, Arthur, Anthony D., Gibbs, Jason, Blochtein, Betina, Szentgyorgyi, Hajnalka, Jin, Li, Mayfield, Margaret M., Woyciechowski, Michał, Wilson, Julianna K., Nunes-Silva, Patrícia, Belmont Forum, European Commission, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Netherlands Organization for Scientific Research, National Science Foundation (US), Allen, Alfonso, Magrach, Ainhoa, Dainese, Matteo, Garibaldi, Lucas A., Kleijn, David, Rader, Romina, Reilly, James R., Winfree, Rachael, Lundin, Ola, McGrady, Carley M., Brittain, Claire, Halinski, Rosana, Henry, Steve, Simmons, Benno I., Dalsgaard, Bo, Campbell, Joshua W., Hansen, Katrine, Mason, Keith, Ward, Kimiora L., Michener, Charles D., Gundersen, Knute B., Pisman, Matti, Bobiwash, Kyle, Gut, Larry, Rowe, Logan M., Boyle, Natalie K., Williams, Neal M., Joshi, Neelendra K., Rothwell, Nikki, Gillespie, Robert L., Isaacs, Rufus, Daily, Gretchen C., Lichtenberg, Elinor M., Fleischer, Shelby J., Peterson, Stephen S., Rao, Sujaya, Pitts-Singer, Theresa L., Fijen, Thijs, Boreux, Virginie, Rundlöf, Maj, Felipe Viana, Blandina, Klein, Alexandra‐Maria, Smith, Henrik G., Schüepp, Christoff, Ehrlich, Paul R., Bommarco, Riccardo, Carvalheiro, Luísa G., Ricketts, Taylor H., Ghazoul, Jaboury, Krishnan, Smitha, Benjamin, Faye E., Loureiro, João, Castro, Sílvia, Raine, Nigel E., Herzog, Felix, Arjen de Groot, Gerard, Burns, Katherine L. W., Horgan, Finbarr G., Hipólito, Juliana, Smagghe, Guy, Meeus, Ivan, Eeraerts, Maxime, Potts, Simon G., Kremen, Claire, Gómez García, Daniel, Entling, Martin H., Miñarro, Marcos, Crowder, David W., Vilà, Montserrat, Pisanty, Gideon, Mandelik, Yael, Vereecken, Nicolas J., Leclercq, Nicolas, Weekers, Timothy, Lindstrom, Sandra A.M., Stanley, Dara A., Dupont, Yoko L., Zaragoza-Trello, C., Nicholson, Charlie C., Scheper, Jeroen, Robson, Andrew, Rad, Carlos, Marks, Evan A. N., Mota, Lucie, Danforth, Bryan, Park, Mia, Bezerra, Antônio Diego M., Jauker, Frank, Freitas, Breno M., Mallinger, Rachel E., Silva, Fabiana Oliveira da, Willcox, Bryony, Howlett, Brad, Ramos, Davi L., Silva, Felipe D. da Silva e, Lázaro, Amparo, Alomar, David, González-Estévez, Miguel A., Schwarzbach, Franciska, Taki, Hisatomo, Cariveau, Daniel P., Garratt, Michael P. D., Nabaes Jodar, Diego Nicolás, Stewart, Rebecca I. A, Blechschmidt, Leah, Ariza, Daniel, Biddinger, David J., Nesper, Maike, Sritongchuay, Tuanjit, Diekötter, Tim, Wolters, Volkmar, Castro, Helena, Gaspar, Hugo, Nault, Brian A., Badenhausser, Isabelle, Petersen, Jessica D., Tscharntke, Teja, Bretagnolle, Vincent, Artz, Derek R., O'Reilly, Alison D., Willis Chan, D. Susan, Chacoff, Natacha P., Andersson, Georg K. S., Jha, Shalene, Colville, Jonathan F., Veldtman, Ruan, Coutinho, Jeferson, Bianchi, Felix J. J. A., Sutter, Louis, Albrecht, Matthias, Chamorro, Fermín José, Elle, Elizabeth, Jeanneret, Philippe, Zou, Yi, Averill, Anne, Sáez, Agustín, Sciligo, Amber R., Vergara, Carlos H., Bloom, Elias H., Oeller, Elisabeth, Badano, Ernesto I., Nates, Guiomar, Loeb, Gregory M., Hoffman, George, Grab, Heather, Ekroos, Johan, Gagic, Vesna, Cunningham, Saul A., Åström, Jens, Cavigliasso, Pablo, Trillo, Alejandro, Classen, Alice, Pigozo, Camila Magalhães, Mauchline, Alice L., Montero-Castaño, Ana, Ellis, James D., Wilby, Andrew, Woodcock, Ben A., Sidhu, C. Sheena, Steffan-Dewenter, Ingolf, Vogiatzakis, Ioannis N., Herrera, José M., Otieno, Mark, Bartomeus, Ignasi, Gikungu, Mary W., Cusser, Sarah J., Nauss, Thomas, Daniels, Jared, Nilsson, Lovisa, Knapp, Jessica, Ortega-Marcos, Jorge J., González, José A., Osborne, Juliet L., Blanche, Rosalind, Brokaw, Julia, Shaw, Rosalind F., Hevia, Violeta, Stout, Jane, Arthur, Anthony D., Gibbs, Jason, Blochtein, Betina, Szentgyorgyi, Hajnalka, Jin, Li, Mayfield, Margaret M., Woyciechowski, Michał, Wilson, Julianna K., and Nunes-Silva, Patrícia
- Abstract
Seventy five percent of the world's food crops benefit from insect pollination. Hence, there has been increased interest in how global change drivers impact this critical ecosystem service. Because standardized data on crop pollination are rarely available, we are limited in our capacity to understand the variation in pollination benefits to crop yield, as well as to anticipate changes in this service, develop predictions, and inform management actions. Here, we present CropPol, a dynamic, open, and global database on crop pollination. It contains measurements recorded from 202 crop studies, covering 3,394 field observations, 2,552 yield measurements (i.e., berry mass, number of fruits, and fruit density [kg/ha], among others), and 47,752 insect records from 48 commercial crops distributed around the globe. CropPol comprises 32 of the 87 leading global crops and commodities that are pollinator dependent. Malus domestica is the most represented crop (32 studies), followed by Brassica napus (22 studies), Vaccinium corymbosum (13 studies), and Citrullus lanatus (12 studies). The most abundant pollinator guilds recorded are honey bees (34.22% counts), bumblebees (19.19%), flies other than Syrphidae and Bombyliidae (13.18%), other wild bees (13.13%), beetles (10.97%), Syrphidae (4.87%), and Bombyliidae (0.05%). Locations comprise 34 countries distributed among Europe (76 studies), North America (60), Latin America and the Caribbean (29), Asia (20), Oceania (10), and Africa (7). Sampling spans three decades and is concentrated on 2001¿2005 (21 studies), 2006¿2010 (40), 2011¿2015 (88), and 2016¿2020 (50). This is the most comprehensive open global data set on measurements of crop flower visitors, crop pollinators and pollination to date, and we encourage researchers to add more datasets to this database in the future.
- Published
- 2022
12. CropPol:A dynamic, open and global database on crop pollination
- Author
-
Allen-Perkins, Alfonso, Magrach, Ainhoa, Dainese, Matteo, Garibaldi, Lucas A., Kleijn, David, Rader, Romina, Reilly, James R., Winfree, Rachael, Lundin, Ola, McGrady, Carley M., Brittain, Claire, Biddinger, David J., Artz, Derek R., Elle, Elizabeth, Hoffman, George, Ellis, James D., Daniels, Jaret, Gibbs, Jason, Campbell, Joshua W., Brokaw, Julia, Wilson, Julianna K., Mason, Keith, Ward, Kimiora L., Gundersen, Knute B., Bobiwash, Kyle, Gut, Larry, Rowe, Logan M., Boyle, Natalie K., Williams, Neal M., Joshi, Neelendra K., Rothwell, Nikki, Gillespie, Robert L., Isaacs, Rufus, Fleischer, Shelby J., Peterson, Stephen S., Rao, Sujaya, Pitts-Singer, Theresa L., Fijen, Thijs, Boreux, Virginie, Rundlöf, Maj, Viana, Blandina Felipe, Klein, Alexandra-Maria, Smith, Henrik G., Bommarco, Riccardo, Carvalheiro, Luísa G., Ricketts, Taylor H., Ghazoul, Jaboury, Krishnan, Smitha, Benjamin, Faye E., Loureiro, João, Castro, Sílvia, Raine, Nigel E., de Groot, Gerard Arjen, Horgan, Finbarr G., Hipólito, Juliana, Smagghe, Guy, Meeus, Ivan, Eeraerts, Maxime, Potts, Simon G., Kremen, Claire, García, Daniel, Miñarro, Marcos, Crowder, David W., Pisanty, Gideon, Mandelik, Yael, Vereecken, Nicolas J., Leclercq, Nicolas, Weekers, Timothy, Lindstrom, Sandra A. M., Stanley, Dara A., Zaragoza-Trello, Carlos, Nicholson, Charlie C., Scheper, Jeroen, Rad, Carlos, Marks, Evan A.N., Mota, Lucie, Danforth, Bryan, Park, Mia, Bezerra, Antônio Diego M., Freitas, Breno M., Mallinger, Rachel E., Oliveira da Silva, Fabiana, Willcox, Bryony, Ramos, Davi L., da Silva e Silva, Felipe D., Lázaro, Amparo, Alomar, David, González-Estévez, Miguel A., Taki, Hisatomo, Cariveau, Daniel P., Garratt, Michael P. D., Nabaes Jodar, Diego N., Stewart, Rebecca I. A., Ariza, Daniel, Pisman, Matti, Lichtenberg, Elinor M., Schüepp, Christof, Herzog, Felix, Entling, Martin H, Dupont, Yoko L., Michener, Charles D., Daily, Gretchen C., Ehrlich, Paul R., Burns, Katherine L.W., Vilà, Montserrat, Robson, Andrew, Howlett, Brad, Blechschmidt, Leah, Jauker, Frank, Schwarzbach, Franziska, Nesper, Maike, Diekötter, Tim, Wolters, Volkmar, Castro, Helena, Gaspar, Hugo, Nault, Brian A., Badenhausser, Isabelle, Petersen, Jessica D., Tscharntke, Teja, Bretagnolle, Vincent, Willis Chan, D. Susan, Chacoff, Natacha, Andersson, Georg K. S., Jha, Shalene, Colville, Jonathan F., Veldtman, Ruan, Coutinho, Jeferson, Bianchi, Felix J. J. A., Sutter, Louis, Albrecht, Matthias, Jeanneret, Philippe, Zou, Yi, Averill, Anne L., Saez, Agustin, Sciligo, Amber R., Vergara, Carlos H, Bloom, Elias H., Oeller, Elisabeth, Badano, Ernesto I., Loeb, Gregory M., Grab, Heather, Ekroos, Johan, Gagic, Vesna, Cunningham, Saul A, Åström, Jens, Cavigliasso, Pablo, Trillo, Alejandro, Classen, Alice, Mauchline, Alice L., Montero-Castaño, Ana, Wilby, Andrew, Woodcock, Ben A., Sidhu, C. Sheena, Steffan-Dewenter, Ingolf, Vogiatzakis, Ioannis N., Herrera, José M., Otieno, Mark, Gikungu, Mary W., Cusser, Sarah J., Nauss, Thomas, Nilsson, Lovisa, Knapp, Jessica, Ortega-Marcos, Jorge J., González, José A., Osborne, Juliet L., Blanche, Rosalind, Shaw, Rosalind F., Hevia, Violeta, Stout, Jane, Arthur, Anthony D., Blochtein, Betina, Szentgyorgyi, Hajnalka, Li, Jin, Mayfield, Margaret M, Woyciechowski, Michał, Nunes-Silva, Patrícia, Halinski de Oliveira, Rosana, Henry, Steve, Simmons, Benno I., Dalsgaard, Bo, Hansen, Katrine, Sritongchuay, Tuanjit, O'Reilly, Alison D., Chamorro García, Fermín José, Nates Parra, Guiomar, Magalhães Pigozo, Camila, Bartomeus, Ignasi, Allen-Perkins, Alfonso, Magrach, Ainhoa, Dainese, Matteo, Garibaldi, Lucas A., Kleijn, David, Rader, Romina, Reilly, James R., Winfree, Rachael, Lundin, Ola, McGrady, Carley M., Brittain, Claire, Biddinger, David J., Artz, Derek R., Elle, Elizabeth, Hoffman, George, Ellis, James D., Daniels, Jaret, Gibbs, Jason, Campbell, Joshua W., Brokaw, Julia, Wilson, Julianna K., Mason, Keith, Ward, Kimiora L., Gundersen, Knute B., Bobiwash, Kyle, Gut, Larry, Rowe, Logan M., Boyle, Natalie K., Williams, Neal M., Joshi, Neelendra K., Rothwell, Nikki, Gillespie, Robert L., Isaacs, Rufus, Fleischer, Shelby J., Peterson, Stephen S., Rao, Sujaya, Pitts-Singer, Theresa L., Fijen, Thijs, Boreux, Virginie, Rundlöf, Maj, Viana, Blandina Felipe, Klein, Alexandra-Maria, Smith, Henrik G., Bommarco, Riccardo, Carvalheiro, Luísa G., Ricketts, Taylor H., Ghazoul, Jaboury, Krishnan, Smitha, Benjamin, Faye E., Loureiro, João, Castro, Sílvia, Raine, Nigel E., de Groot, Gerard Arjen, Horgan, Finbarr G., Hipólito, Juliana, Smagghe, Guy, Meeus, Ivan, Eeraerts, Maxime, Potts, Simon G., Kremen, Claire, García, Daniel, Miñarro, Marcos, Crowder, David W., Pisanty, Gideon, Mandelik, Yael, Vereecken, Nicolas J., Leclercq, Nicolas, Weekers, Timothy, Lindstrom, Sandra A. M., Stanley, Dara A., Zaragoza-Trello, Carlos, Nicholson, Charlie C., Scheper, Jeroen, Rad, Carlos, Marks, Evan A.N., Mota, Lucie, Danforth, Bryan, Park, Mia, Bezerra, Antônio Diego M., Freitas, Breno M., Mallinger, Rachel E., Oliveira da Silva, Fabiana, Willcox, Bryony, Ramos, Davi L., da Silva e Silva, Felipe D., Lázaro, Amparo, Alomar, David, González-Estévez, Miguel A., Taki, Hisatomo, Cariveau, Daniel P., Garratt, Michael P. D., Nabaes Jodar, Diego N., Stewart, Rebecca I. A., Ariza, Daniel, Pisman, Matti, Lichtenberg, Elinor M., Schüepp, Christof, Herzog, Felix, Entling, Martin H, Dupont, Yoko L., Michener, Charles D., Daily, Gretchen C., Ehrlich, Paul R., Burns, Katherine L.W., Vilà, Montserrat, Robson, Andrew, Howlett, Brad, Blechschmidt, Leah, Jauker, Frank, Schwarzbach, Franziska, Nesper, Maike, Diekötter, Tim, Wolters, Volkmar, Castro, Helena, Gaspar, Hugo, Nault, Brian A., Badenhausser, Isabelle, Petersen, Jessica D., Tscharntke, Teja, Bretagnolle, Vincent, Willis Chan, D. Susan, Chacoff, Natacha, Andersson, Georg K. S., Jha, Shalene, Colville, Jonathan F., Veldtman, Ruan, Coutinho, Jeferson, Bianchi, Felix J. J. A., Sutter, Louis, Albrecht, Matthias, Jeanneret, Philippe, Zou, Yi, Averill, Anne L., Saez, Agustin, Sciligo, Amber R., Vergara, Carlos H, Bloom, Elias H., Oeller, Elisabeth, Badano, Ernesto I., Loeb, Gregory M., Grab, Heather, Ekroos, Johan, Gagic, Vesna, Cunningham, Saul A, Åström, Jens, Cavigliasso, Pablo, Trillo, Alejandro, Classen, Alice, Mauchline, Alice L., Montero-Castaño, Ana, Wilby, Andrew, Woodcock, Ben A., Sidhu, C. Sheena, Steffan-Dewenter, Ingolf, Vogiatzakis, Ioannis N., Herrera, José M., Otieno, Mark, Gikungu, Mary W., Cusser, Sarah J., Nauss, Thomas, Nilsson, Lovisa, Knapp, Jessica, Ortega-Marcos, Jorge J., González, José A., Osborne, Juliet L., Blanche, Rosalind, Shaw, Rosalind F., Hevia, Violeta, Stout, Jane, Arthur, Anthony D., Blochtein, Betina, Szentgyorgyi, Hajnalka, Li, Jin, Mayfield, Margaret M, Woyciechowski, Michał, Nunes-Silva, Patrícia, Halinski de Oliveira, Rosana, Henry, Steve, Simmons, Benno I., Dalsgaard, Bo, Hansen, Katrine, Sritongchuay, Tuanjit, O'Reilly, Alison D., Chamorro García, Fermín José, Nates Parra, Guiomar, Magalhães Pigozo, Camila, and Bartomeus, Ignasi
- Abstract
Seventy five percent of the world's food crops benefit from insect pollination. Hence, there has been increased interest in how global change drivers impact this critical ecosystem service. Because standardized data on crop pollination are rarely available, we are limited in our capacity to understand the variation in pollination benefits to crop yield, as well as to anticipate changes in this service, develop predictions, and inform management actions. Here, we present CropPol, a dynamic, open, and global database on crop pollination. It contains measurements recorded from 202 crop studies, covering 3,394 field observations, 2,552 yield measurements (i.e., berry mass, number of fruits, and fruit density [kg/ha], among others), and 47,752 insect records from 48 commercial crops distributed around the globe. CropPol comprises 32 of the 87 leading global crops and commodities that are pollinator dependent. Malus domestica is the most represented crop (32 studies), followed by Brassica napus (22 studies), Vaccinium corymbosum (13 studies), and Citrullus lanatus (12 studies). The most abundant pollinator guilds recorded are honey bees (34.22% counts), bumblebees (19.19%), flies other than Syrphidae and Bombyliidae (13.18%), other wild bees (13.13%), beetles (10.97%), Syrphidae (4.87%), and Bombyliidae (0.05%). Locations comprise 34 countries distributed among Europe (76 studies), North America (60), Latin America and the Caribbean (29), Asia (20), Oceania (10), and Africa (7). Sampling spans three decades and is concentrated on 2001–2005 (21 studies), 2006–2010 (40), 2011–2015 (88), and 2016–2020 (50). This is the most comprehensive open global data set on measurements of crop flower visitors, crop pollinators and pollination to date, and we encourage researchers to add more datasets to this database in the future. This data set is released for non-commercial use only. Credits should be given to this paper (i.e., proper citation), and the products generated with this
- Published
- 2022
13. CropPol: a dynamic, open and global database on crop pollination
- Author
-
Allen‐Perkins, Alfonso, Magrach, Ainhoa, Dainese, Matteo, Garibaldi, Lucas A., Kleijn, David, Rader, Romina, Reilly, James R., Winfree, Rachael, Lundin, Ola, McGrady, Carley M., Brittain, Claire, Biddinger, David J., Artz, Derek R., Elle, Elizabeth, Hoffman, George, Ellis, James D., Daniels, Jaret, Gibbs, Jason, Campbell, Joshua W., Brokaw, Julia, Wilson, Julianna K., Mason, Keith, Ward, Kimiora L., Gundersen, Knute B., Bobiwash, Kyle, Gut, Larry, Rowe, Logan M., Boyle, Natalie K., Williams, Neal M., Joshi, Neelendra K., Rothwell, Nikki, Gillespie, Robert L., Isaacs, Rufus, Fleischer, Shelby J., Peterson, Stephen S., Rao, Sujaya, Pitts‐Singer, Theresa L., Fijen, Thijs, Boreux, Virginie, Rundlöf, Maj, Viana, Blandina Felipe, Klein, Alexandra‐Maria, Smith, Henrik G., Bommarco, Riccardo, Carvalheiro, Luísa G., Ricketts, Taylor H., Ghazoul, Jaboury, Krishnan, Smitha, Benjamin, Faye E., Loureiro, João, Castro, Sílvia, Raine, Nigel E., Groot, Gerard Arjen, Horgan, Finbarr G., Hipólito, Juliana, Smagghe, Guy, Meeus, Ivan, Eeraerts, Maxime, Potts, Simon G., Kremen, Claire, García, Daniel, Miñarro, Marcos, Crowder, David W., Pisanty, Gideon, Mandelik, Yael, Vereecken, Nicolas J., Leclercq, Nicolas, Weekers, Timothy, Lindstrom, Sandra A.M., Stanley, Dara A., Zaragoza‐Trello, Carlos, Nicholson, Charlie C., Scheper, Jeroen, Rad, Carlos, Marks, Evan A.N., Mota, Lucie, Danforth, Bryan, Park, Mia, Bezerra, Antônio Diego M., Freitas, Breno M., Mallinger, Rachel E., Silva, Fabiana Oliveira, Willcox, Bryony, Ramos, Davi L., Silva e Silva, Felipe D., Lázaro, Amparo, Alomar, David, González‐Estévez, Miguel A., Taki, Hisatomo, Cariveau, Daniel P., Garratt, Michael P.D., Nabaes Jodar, Diego N., Stewart, Rebecca I.A., Ariza, Daniel, Pisman, Matti, Lichtenberg, Elinor M., Schüepp, Christof, Herzog, Felix, Entling, Martin H., Dupont, Yoko L., Michener, Charles D., Daily, Gretchen C., Ehrlich, Paul R., Burns, Katherine L.W., Vilà, Montserrat, Robson, Andrew, Howlett, Brad, Blechschmidt, Leah, Jauker, Frank, Schwarzbach, Franziska, Nesper, Maike, Diekötter, Tim, Wolters, Volkmar, Castro, Helena, Gaspar, Hugo, Nault, Brian A., Badenhausser, Isabelle, Petersen, Jessica D., Tscharntke, Teja, Bretagnolle, Vincent, Chan, D. Susan Willis, Chacoff, Natacha, Andersson, Georg K.S., Jha, Shalene, Colville, Jonathan F., Veldtman, Ruan, Coutinho, Jeferson, Bianchi, Felix J.J.A., Sutter, Louis, Albrecht, Matthias, Jeanneret, Philippe, Zou, Yi, Averill, Anne L., Saez, Agustin, Sciligo, Amber R., Vergara, Carlos H., Bloom, Elias H., Oeller, Elisabeth, Badano, Ernesto I., Loeb, Gregory M., Grab, Heather, Ekroos, Johan, Gagic, Vesna, Cunningham, Saul A., Åström, Jens, Cavigliasso, Pablo, Trillo, Alejandro, Classen, Alice, Mauchline, Alice L., Montero‐Castaño, Ana, Wilby, Andrew, Woodcock, Ben A., Sidhu, C. Sheena, Steffan‐Dewenter, Ingolf, Vogiatzakis, Ioannis N., Herrera, José M., Otieno, Mark, Gikungu, Mary W., Cusser, Sarah J., Nauss, Thomas, Nilsson, Lovisa, Knapp, Jessica, Ortega‐Marcos, Jorge J., González, José A., Osborne, Juliet L., Blanche, Rosalind, Shaw, Rosalind F., Hevia, Violeta, Stout, Jane, Arthur, Anthony D., Blochtein, Betina, Szentgyorgyi, Hajnalka, Li, Jin, Mayfield, Margaret M., Woyciechowski, Michał, Nunes‐Silva, Patrícia, Oliveira, Rosana Halinski, Henry, Steve, Simmons, Benno I., Dalsgaard, Bo, Hansen, Katrine, Sritongchuay, Tuanjit, O'Reilly, Alison D., García, Fermín José Chamorro, Parra, Guiomar Nates, Pigozo, Camila Magalhães, Bartomeus, Ignasi, Allen‐Perkins, Alfonso, Magrach, Ainhoa, Dainese, Matteo, Garibaldi, Lucas A., Kleijn, David, Rader, Romina, Reilly, James R., Winfree, Rachael, Lundin, Ola, McGrady, Carley M., Brittain, Claire, Biddinger, David J., Artz, Derek R., Elle, Elizabeth, Hoffman, George, Ellis, James D., Daniels, Jaret, Gibbs, Jason, Campbell, Joshua W., Brokaw, Julia, Wilson, Julianna K., Mason, Keith, Ward, Kimiora L., Gundersen, Knute B., Bobiwash, Kyle, Gut, Larry, Rowe, Logan M., Boyle, Natalie K., Williams, Neal M., Joshi, Neelendra K., Rothwell, Nikki, Gillespie, Robert L., Isaacs, Rufus, Fleischer, Shelby J., Peterson, Stephen S., Rao, Sujaya, Pitts‐Singer, Theresa L., Fijen, Thijs, Boreux, Virginie, Rundlöf, Maj, Viana, Blandina Felipe, Klein, Alexandra‐Maria, Smith, Henrik G., Bommarco, Riccardo, Carvalheiro, Luísa G., Ricketts, Taylor H., Ghazoul, Jaboury, Krishnan, Smitha, Benjamin, Faye E., Loureiro, João, Castro, Sílvia, Raine, Nigel E., Groot, Gerard Arjen, Horgan, Finbarr G., Hipólito, Juliana, Smagghe, Guy, Meeus, Ivan, Eeraerts, Maxime, Potts, Simon G., Kremen, Claire, García, Daniel, Miñarro, Marcos, Crowder, David W., Pisanty, Gideon, Mandelik, Yael, Vereecken, Nicolas J., Leclercq, Nicolas, Weekers, Timothy, Lindstrom, Sandra A.M., Stanley, Dara A., Zaragoza‐Trello, Carlos, Nicholson, Charlie C., Scheper, Jeroen, Rad, Carlos, Marks, Evan A.N., Mota, Lucie, Danforth, Bryan, Park, Mia, Bezerra, Antônio Diego M., Freitas, Breno M., Mallinger, Rachel E., Silva, Fabiana Oliveira, Willcox, Bryony, Ramos, Davi L., Silva e Silva, Felipe D., Lázaro, Amparo, Alomar, David, González‐Estévez, Miguel A., Taki, Hisatomo, Cariveau, Daniel P., Garratt, Michael P.D., Nabaes Jodar, Diego N., Stewart, Rebecca I.A., Ariza, Daniel, Pisman, Matti, Lichtenberg, Elinor M., Schüepp, Christof, Herzog, Felix, Entling, Martin H., Dupont, Yoko L., Michener, Charles D., Daily, Gretchen C., Ehrlich, Paul R., Burns, Katherine L.W., Vilà, Montserrat, Robson, Andrew, Howlett, Brad, Blechschmidt, Leah, Jauker, Frank, Schwarzbach, Franziska, Nesper, Maike, Diekötter, Tim, Wolters, Volkmar, Castro, Helena, Gaspar, Hugo, Nault, Brian A., Badenhausser, Isabelle, Petersen, Jessica D., Tscharntke, Teja, Bretagnolle, Vincent, Chan, D. Susan Willis, Chacoff, Natacha, Andersson, Georg K.S., Jha, Shalene, Colville, Jonathan F., Veldtman, Ruan, Coutinho, Jeferson, Bianchi, Felix J.J.A., Sutter, Louis, Albrecht, Matthias, Jeanneret, Philippe, Zou, Yi, Averill, Anne L., Saez, Agustin, Sciligo, Amber R., Vergara, Carlos H., Bloom, Elias H., Oeller, Elisabeth, Badano, Ernesto I., Loeb, Gregory M., Grab, Heather, Ekroos, Johan, Gagic, Vesna, Cunningham, Saul A., Åström, Jens, Cavigliasso, Pablo, Trillo, Alejandro, Classen, Alice, Mauchline, Alice L., Montero‐Castaño, Ana, Wilby, Andrew, Woodcock, Ben A., Sidhu, C. Sheena, Steffan‐Dewenter, Ingolf, Vogiatzakis, Ioannis N., Herrera, José M., Otieno, Mark, Gikungu, Mary W., Cusser, Sarah J., Nauss, Thomas, Nilsson, Lovisa, Knapp, Jessica, Ortega‐Marcos, Jorge J., González, José A., Osborne, Juliet L., Blanche, Rosalind, Shaw, Rosalind F., Hevia, Violeta, Stout, Jane, Arthur, Anthony D., Blochtein, Betina, Szentgyorgyi, Hajnalka, Li, Jin, Mayfield, Margaret M., Woyciechowski, Michał, Nunes‐Silva, Patrícia, Oliveira, Rosana Halinski, Henry, Steve, Simmons, Benno I., Dalsgaard, Bo, Hansen, Katrine, Sritongchuay, Tuanjit, O'Reilly, Alison D., García, Fermín José Chamorro, Parra, Guiomar Nates, Pigozo, Camila Magalhães, and Bartomeus, Ignasi
- Abstract
Seventy five percent of the world's food crops benefit from insect pollination. Hence, there has been increased interest in how global change drivers impact this critical ecosystem service. Because standardized data on crop pollination are rarely available, we are limited in our capacity to understand the variation in pollination benefits to crop yield, as well as to anticipate changes in this service, develop predictions, and inform management actions. Here, we present CropPol, a dynamic, open and global database on crop pollination. It contains measurements recorded from 202 crop studies, covering 3,394 field observations, 2,552 yield measurements (i.e. berry weight, number of fruits and kg per hectare, among others), and 47,752 insect records from 48 commercial crops distributed around the globe. CropPol comprises 32 of the 87 leading global crops and commodities that are pollinator dependent. Malus domestica is the most represented crop (32 studies), followed by Brassica napus (22 studies), Vaccinium corymbosum (13 studies), and Citrullus lanatus (12 studies). The most abundant pollinator guilds recorded are honey bees (34.22% counts), bumblebees (19.19%), flies other than Syrphidae and Bombyliidae (13.18%), other wild bees (13.13%), beetles (10.97%), Syrphidae (4.87%), and Bombyliidae (0.05%). Locations comprise 34 countries distributed among Europe (76 studies), Northern America (60), Latin America and the Caribbean (29), Asia (20), Oceania (10), and Africa (7). Sampling spans three decades and is concentrated on 2001-05 (21 studies), 2006-10 (40), 2011-15 (88), and 2016-20 (50). This is the most comprehensive open global data set on measurements of crop flower visitors, crop pollinators and pollination to date, and we encourage researchers to add more datasets to this database in the future. This data set is released for non-commercial use only. Credits should be given to this paper (i.e., proper citation), and the products generated with this database should
- Published
- 2022
14. CropPol: A dynamic, open and global database on crop pollination
- Author
-
Allen‐Perkins, Alfonso, primary, Magrach, Ainhoa, additional, Dainese, Matteo, additional, Garibaldi, Lucas A., additional, Kleijn, David, additional, Rader, Romina, additional, Reilly, James R., additional, Winfree, Rachael, additional, Lundin, Ola, additional, McGrady, Carley M., additional, Brittain, Claire, additional, Biddinger, David J., additional, Artz, Derek R., additional, Elle, Elizabeth, additional, Hoffman, George, additional, Ellis, James D., additional, Daniels, Jaret, additional, Gibbs, Jason, additional, Campbell, Joshua W., additional, Brokaw, Julia, additional, Wilson, Julianna K., additional, Mason, Keith, additional, Ward, Kimiora L., additional, Gundersen, Knute B., additional, Bobiwash, Kyle, additional, Gut, Larry, additional, Rowe, Logan M., additional, Boyle, Natalie K., additional, Williams, Neal M., additional, Joshi, Neelendra K., additional, Rothwell, Nikki, additional, Gillespie, Robert L., additional, Isaacs, Rufus, additional, Fleischer, Shelby J., additional, Peterson, Stephen S., additional, Rao, Sujaya, additional, Pitts‐Singer, Theresa L., additional, Fijen, Thijs, additional, Boreux, Virginie, additional, Rundlöf, Maj, additional, Viana, Blandina Felipe, additional, Klein, Alexandra‐Maria, additional, Smith, Henrik G., additional, Bommarco, Riccardo, additional, Carvalheiro, Luísa G., additional, Ricketts, Taylor H., additional, Ghazoul, Jaboury, additional, Krishnan, Smitha, additional, Benjamin, Faye E., additional, Loureiro, João, additional, Castro, Sílvia, additional, Raine, Nigel E., additional, de Groot, Gerard Arjen, additional, Horgan, Finbarr G., additional, Hipólito, Juliana, additional, Smagghe, Guy, additional, Meeus, Ivan, additional, Eeraerts, Maxime, additional, Potts, Simon G., additional, Kremen, Claire, additional, García, Daniel, additional, Miñarro, Marcos, additional, Crowder, David W., additional, Pisanty, Gideon, additional, Mandelik, Yael, additional, Vereecken, Nicolas J., additional, Leclercq, Nicolas, additional, Weekers, Timothy, additional, Lindstrom, Sandra A. M., additional, Stanley, Dara A., additional, Zaragoza‐Trello, Carlos, additional, Nicholson, Charlie C., additional, Scheper, Jeroen, additional, Rad, Carlos, additional, Marks, Evan A. N., additional, Mota, Lucie, additional, Danforth, Bryan, additional, Park, Mia, additional, Bezerra, Antônio Diego M., additional, Freitas, Breno M., additional, Mallinger, Rachel E., additional, Oliveira da Silva, Fabiana, additional, Willcox, Bryony, additional, Ramos, Davi L., additional, D. da Silva e Silva, Felipe, additional, Lázaro, Amparo, additional, Alomar, David, additional, González‐Estévez, Miguel A., additional, Taki, Hisatomo, additional, Cariveau, Daniel P., additional, Garratt, Michael P. D., additional, Nabaes Jodar, Diego N., additional, Stewart, Rebecca I. A., additional, Ariza, Daniel, additional, Pisman, Matti, additional, Lichtenberg, Elinor M., additional, Schüepp, Christof, additional, Herzog, Felix, additional, Entling, Martin H., additional, Dupont, Yoko L., additional, Michener, Charles D., additional, Daily, Gretchen C., additional, Ehrlich, Paul R., additional, Burns, Katherine L. W., additional, Vilà, Montserrat, additional, Robson, Andrew, additional, Howlett, Brad, additional, Blechschmidt, Leah, additional, Jauker, Frank, additional, Schwarzbach, Franziska, additional, Nesper, Maike, additional, Diekötter, Tim, additional, Wolters, Volkmar, additional, Castro, Helena, additional, Gaspar, Hugo, additional, Nault, Brian A., additional, Badenhausser, Isabelle, additional, Petersen, Jessica D., additional, Tscharntke, Teja, additional, Bretagnolle, Vincent, additional, Willis Chan, D. Susan, additional, Chacoff, Natacha, additional, Andersson, Georg K. S., additional, Jha, Shalene, additional, Colville, Jonathan F., additional, Veldtman, Ruan, additional, Coutinho, Jeferson, additional, Bianchi, Felix J. J. A., additional, Sutter, Louis, additional, Albrecht, Matthias, additional, Jeanneret, Philippe, additional, Zou, Yi, additional, Averill, Anne L., additional, Saez, Agustin, additional, Sciligo, Amber R., additional, Vergara, Carlos H., additional, Bloom, Elias H., additional, Oeller, Elisabeth, additional, Badano, Ernesto I., additional, Loeb, Gregory M., additional, Grab, Heather, additional, Ekroos, Johan, additional, Gagic, Vesna, additional, Cunningham, Saul A., additional, Åström, Jens, additional, Cavigliasso, Pablo, additional, Trillo, Alejandro, additional, Classen, Alice, additional, Mauchline, Alice L., additional, Montero‐Castaño, Ana, additional, Wilby, Andrew, additional, Woodcock, Ben A., additional, Sidhu, C. Sheena, additional, Steffan‐Dewenter, Ingolf, additional, Vogiatzakis, Ioannis N., additional, Herrera, José M., additional, Otieno, Mark, additional, Gikungu, Mary W., additional, Cusser, Sarah J., additional, Nauss, Thomas, additional, Nilsson, Lovisa, additional, Knapp, Jessica, additional, Ortega‐Marcos, Jorge J., additional, González, José A., additional, Osborne, Juliet L., additional, Blanche, Rosalind, additional, Shaw, Rosalind F., additional, Hevia, Violeta, additional, Stout, Jane, additional, Arthur, Anthony D., additional, Blochtein, Betina, additional, Szentgyorgyi, Hajnalka, additional, Li, Jin, additional, Mayfield, Margaret M., additional, Woyciechowski, Michał, additional, Nunes‐Silva, Patrícia, additional, Halinski de Oliveira, Rosana, additional, Henry, Steve, additional, Simmons, Benno I., additional, Dalsgaard, Bo, additional, Hansen, Katrine, additional, Sritongchuay, Tuanjit, additional, O'Reilly, Alison D., additional, Chamorro García, Fermín José, additional, Nates Parra, Guiomar, additional, Magalhães Pigozo, Camila, additional, and Bartomeus, Ignasi, additional
- Published
- 2022
- Full Text
- View/download PDF
15. POSB289 Emergence of Applications for Digital Health Technologies and Details of HTA Assessments for Digital Health in Europe
- Author
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Sidhu, C., primary, Ohanwusi, E., additional, Bending, MW., additional, and Sullivan, N., additional
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- 2022
- Full Text
- View/download PDF
16. Pollination ecology of island endemic plants: a case study on the California Channel Islands.
- Author
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SHEENA SIDHU, C., LOZANO, GISELLE E., MINER, MICHELLE C., HOWE, EMILY, and WILSON-RANKIN, ERIN E.
- Subjects
- *
ISLAND plants , *ISLAND ecology , *POLLINATION , *FRUIT seeds , *GERMINATION , *ENDANGERED plants - Abstract
Understanding the pollination requirements of threatened species is critical for the success of longterm conservation strategies. In a series of greenhouse experiments, we assessed the effects of different pollination treatments, including autogamy, facilitated autogamy, and cross-pollination on fruit and seed set for 2 generations of a rare island endemic plant. Santa Cruz Island rockcress, Sibara filifolia (Brassicaceae), is a rare, endangered annual herb that is endemic to the California Channel Islands. While efforts are underway to monitor and conserve this rare plant species, little is known about its pollination biology. We quantified the index of self-compatibility and multiplicative fitness. We also assessed how maternal plant treatment influenced seed germination and seedling survival rates. While S. filifolia is fully self-compatible, we demonstrate that facilitated pollination and outcrossing treatments positively affected all measures of reproductive output and fitness in first-generation plants. Metrics of predispersal fitness (e.g., fruit set and seed production) in the F2 generation also increased significantly in response to facilitated pollination and outcrossing. While our data suggest that S. filifolia fecundity increases with outcrossing, we observed lower fitness benefits of facilitated autogamy and outcrossing on the production of F2 seeds. This highlights the difficulty in providing specific recommendations when the consequences of outbreeding may not be detectable until later generations. More study is required to confirm that multiple generations of interpopulation gene flow can effectively improve population viability and decrease genetic erosion. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
17. CropPol: a dynamic, open and global database on crop pollination
- Author
-
Allen‐Perkins, Alfonso, Magrach, Ainhoa, Dainese, Matteo, Garibaldi, Lucas A., Kleijn, David, Rader, Romina, Reilly, James R., Winfree, Rachael, Lundin, Ola, McGrady, Carley M., Brittain, Claire, Biddinger, David J., Artz, Derek R., Elle, Elizabeth, Hoffman, George, Ellis, James D., Daniels, Jaret, Gibbs, Jason, Campbell, Joshua W., Brokaw, Julia, Wilson, Julianna K., Mason, Keith, Ward, Kimiora L., Gundersen, Knute B., Bobiwash, Kyle, Gut, Larry, Rowe, Logan M., Boyle, Natalie K., Williams, Neal M., Joshi, Neelendra K., Rothwell, Nikki, Gillespie, Robert L., Isaacs, Rufus, Fleischer, Shelby J., Peterson, Stephen S., Rao, Sujaya, Pitts‐Singer, Theresa L., Fijen, Thijs, Boreux, Virginie, Rundlöf, Maj, Viana, Blandina Felipe, Klein, Alexandra‐Maria, Smith, Henrik G., Bommarco, Riccardo, Carvalheiro, Luísa G., Ricketts, Taylor H., Ghazoul, Jaboury, Krishnan, Smitha, Benjamin, Faye E., Loureiro, João, Castro, Sílvia, Raine, Nigel E., Groot, Gerard Arjen, Horgan, Finbarr G., Hipólito, Juliana, Smagghe, Guy, Meeus, Ivan, Eeraerts, Maxime, Potts, Simon G., Kremen, Claire, García, Daniel, Miñarro, Marcos, Crowder, David W., Pisanty, Gideon, Mandelik, Yael, Vereecken, Nicolas J., Leclercq, Nicolas, Weekers, Timothy, Lindstrom, Sandra A.M., Stanley, Dara A., Zaragoza‐Trello, Carlos, Nicholson, Charlie C., Scheper, Jeroen, Rad, Carlos, Marks, Evan A.N., Mota, Lucie, Danforth, Bryan, Park, Mia, Bezerra, Antônio Diego M., Freitas, Breno M., Mallinger, Rachel E., Silva, Fabiana Oliveira, Willcox, Bryony, Ramos, Davi L., Silva e Silva, Felipe D., Lázaro, Amparo, Alomar, David, González‐Estévez, Miguel A., Taki, Hisatomo, Cariveau, Daniel P., Garratt, Michael P.D., Nabaes Jodar, Diego N., Stewart, Rebecca I.A., Ariza, Daniel, Pisman, Matti, Lichtenberg, Elinor M., Schüepp, Christof, Herzog, Felix, Entling, Martin H., Dupont, Yoko L., Michener, Charles D., Daily, Gretchen C., Ehrlich, Paul R., Burns, Katherine L.W., Vilà, Montserrat, Robson, Andrew, Howlett, Brad, Blechschmidt, Leah, Jauker, Frank, Schwarzbach, Franziska, Nesper, Maike, Diekötter, Tim, Wolters, Volkmar, Castro, Helena, Gaspar, Hugo, Nault, Brian A., Badenhausser, Isabelle, Petersen, Jessica D., Tscharntke, Teja, Bretagnolle, Vincent, Chan, D. Susan Willis, Chacoff, Natacha, Andersson, Georg K.S., Jha, Shalene, Colville, Jonathan F., Veldtman, Ruan, Coutinho, Jeferson, Bianchi, Felix J.J.A., Sutter, Louis, Albrecht, Matthias, Jeanneret, Philippe, Zou, Yi, Averill, Anne L., Saez, Agustin, Sciligo, Amber R., Vergara, Carlos H., Bloom, Elias H., Oeller, Elisabeth, Badano, Ernesto I., Loeb, Gregory M., Grab, Heather, Ekroos, Johan, Gagic, Vesna, Cunningham, Saul A., Åström, Jens, Cavigliasso, Pablo, Trillo, Alejandro, Classen, Alice, Mauchline, Alice L., Montero‐Castaño, Ana, Wilby, Andrew, Woodcock, Ben A., Sidhu, C. Sheena, Steffan‐Dewenter, Ingolf, Vogiatzakis, Ioannis N., Herrera, José M., Otieno, Mark, Gikungu, Mary W., Cusser, Sarah J., Nauss, Thomas, Nilsson, Lovisa, Knapp, Jessica, Ortega‐Marcos, Jorge J., González, José A., Osborne, Juliet L., Blanche, Rosalind, Shaw, Rosalind F., Hevia, Violeta, Stout, Jane, Arthur, Anthony D., Blochtein, Betina, Szentgyorgyi, Hajnalka, Li, Jin, Mayfield, Margaret M., Woyciechowski, Michał, Nunes‐Silva, Patrícia, Oliveira, Rosana Halinski, Henry, Steve, Simmons, Benno I., Dalsgaard, Bo, Hansen, Katrine, Sritongchuay, Tuanjit, O'Reilly, Alison D., García, Fermín José Chamorro, Parra, Guiomar Nates, Pigozo, Camila Magalhães, Bartomeus, Ignasi, Allen‐Perkins, Alfonso, Magrach, Ainhoa, Dainese, Matteo, Garibaldi, Lucas A., Kleijn, David, Rader, Romina, Reilly, James R., Winfree, Rachael, Lundin, Ola, McGrady, Carley M., Brittain, Claire, Biddinger, David J., Artz, Derek R., Elle, Elizabeth, Hoffman, George, Ellis, James D., Daniels, Jaret, Gibbs, Jason, Campbell, Joshua W., Brokaw, Julia, Wilson, Julianna K., Mason, Keith, Ward, Kimiora L., Gundersen, Knute B., Bobiwash, Kyle, Gut, Larry, Rowe, Logan M., Boyle, Natalie K., Williams, Neal M., Joshi, Neelendra K., Rothwell, Nikki, Gillespie, Robert L., Isaacs, Rufus, Fleischer, Shelby J., Peterson, Stephen S., Rao, Sujaya, Pitts‐Singer, Theresa L., Fijen, Thijs, Boreux, Virginie, Rundlöf, Maj, Viana, Blandina Felipe, Klein, Alexandra‐Maria, Smith, Henrik G., Bommarco, Riccardo, Carvalheiro, Luísa G., Ricketts, Taylor H., Ghazoul, Jaboury, Krishnan, Smitha, Benjamin, Faye E., Loureiro, João, Castro, Sílvia, Raine, Nigel E., Groot, Gerard Arjen, Horgan, Finbarr G., Hipólito, Juliana, Smagghe, Guy, Meeus, Ivan, Eeraerts, Maxime, Potts, Simon G., Kremen, Claire, García, Daniel, Miñarro, Marcos, Crowder, David W., Pisanty, Gideon, Mandelik, Yael, Vereecken, Nicolas J., Leclercq, Nicolas, Weekers, Timothy, Lindstrom, Sandra A.M., Stanley, Dara A., Zaragoza‐Trello, Carlos, Nicholson, Charlie C., Scheper, Jeroen, Rad, Carlos, Marks, Evan A.N., Mota, Lucie, Danforth, Bryan, Park, Mia, Bezerra, Antônio Diego M., Freitas, Breno M., Mallinger, Rachel E., Silva, Fabiana Oliveira, Willcox, Bryony, Ramos, Davi L., Silva e Silva, Felipe D., Lázaro, Amparo, Alomar, David, González‐Estévez, Miguel A., Taki, Hisatomo, Cariveau, Daniel P., Garratt, Michael P.D., Nabaes Jodar, Diego N., Stewart, Rebecca I.A., Ariza, Daniel, Pisman, Matti, Lichtenberg, Elinor M., Schüepp, Christof, Herzog, Felix, Entling, Martin H., Dupont, Yoko L., Michener, Charles D., Daily, Gretchen C., Ehrlich, Paul R., Burns, Katherine L.W., Vilà, Montserrat, Robson, Andrew, Howlett, Brad, Blechschmidt, Leah, Jauker, Frank, Schwarzbach, Franziska, Nesper, Maike, Diekötter, Tim, Wolters, Volkmar, Castro, Helena, Gaspar, Hugo, Nault, Brian A., Badenhausser, Isabelle, Petersen, Jessica D., Tscharntke, Teja, Bretagnolle, Vincent, Chan, D. Susan Willis, Chacoff, Natacha, Andersson, Georg K.S., Jha, Shalene, Colville, Jonathan F., Veldtman, Ruan, Coutinho, Jeferson, Bianchi, Felix J.J.A., Sutter, Louis, Albrecht, Matthias, Jeanneret, Philippe, Zou, Yi, Averill, Anne L., Saez, Agustin, Sciligo, Amber R., Vergara, Carlos H., Bloom, Elias H., Oeller, Elisabeth, Badano, Ernesto I., Loeb, Gregory M., Grab, Heather, Ekroos, Johan, Gagic, Vesna, Cunningham, Saul A., Åström, Jens, Cavigliasso, Pablo, Trillo, Alejandro, Classen, Alice, Mauchline, Alice L., Montero‐Castaño, Ana, Wilby, Andrew, Woodcock, Ben A., Sidhu, C. Sheena, Steffan‐Dewenter, Ingolf, Vogiatzakis, Ioannis N., Herrera, José M., Otieno, Mark, Gikungu, Mary W., Cusser, Sarah J., Nauss, Thomas, Nilsson, Lovisa, Knapp, Jessica, Ortega‐Marcos, Jorge J., González, José A., Osborne, Juliet L., Blanche, Rosalind, Shaw, Rosalind F., Hevia, Violeta, Stout, Jane, Arthur, Anthony D., Blochtein, Betina, Szentgyorgyi, Hajnalka, Li, Jin, Mayfield, Margaret M., Woyciechowski, Michał, Nunes‐Silva, Patrícia, Oliveira, Rosana Halinski, Henry, Steve, Simmons, Benno I., Dalsgaard, Bo, Hansen, Katrine, Sritongchuay, Tuanjit, O'Reilly, Alison D., García, Fermín José Chamorro, Parra, Guiomar Nates, Pigozo, Camila Magalhães, and Bartomeus, Ignasi
- Abstract
Seventy five percent of the world's food crops benefit from insect pollination. Hence, there has been increased interest in how global change drivers impact this critical ecosystem service. Because standardized data on crop pollination are rarely available, we are limited in our capacity to understand the variation in pollination benefits to crop yield, as well as to anticipate changes in this service, develop predictions, and inform management actions. Here, we present CropPol, a dynamic, open and global database on crop pollination. It contains measurements recorded from 202 crop studies, covering 3,394 field observations, 2,552 yield measurements (i.e. berry weight, number of fruits and kg per hectare, among others), and 47,752 insect records from 48 commercial crops distributed around the globe. CropPol comprises 32 of the 87 leading global crops and commodities that are pollinator dependent. Malus domestica is the most represented crop (32 studies), followed by Brassica napus (22 studies), Vaccinium corymbosum (13 studies), and Citrullus lanatus (12 studies). The most abundant pollinator guilds recorded are honey bees (34.22% counts), bumblebees (19.19%), flies other than Syrphidae and Bombyliidae (13.18%), other wild bees (13.13%), beetles (10.97%), Syrphidae (4.87%), and Bombyliidae (0.05%). Locations comprise 34 countries distributed among Europe (76 studies), Northern America (60), Latin America and the Caribbean (29), Asia (20), Oceania (10), and Africa (7). Sampling spans three decades and is concentrated on 2001-05 (21 studies), 2006-10 (40), 2011-15 (88), and 2016-20 (50). This is the most comprehensive open global data set on measurements of crop flower visitors, crop pollinators and pollination to date, and we encourage researchers to add more datasets to this database in the future. This data set is released for non-commercial use only. Credits should be given to this paper (i.e., proper citation), and the products generated with this database should
- Published
- 2021
18. HPR68 Inflation Reduction Act – Insights and Impact on Different Therapeutic Areas from the US Commercial Payer Perspective
- Author
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Sidhu, C., Connelly, B., Blake, L., and Sullivan, N.
- Published
- 2023
- Full Text
- View/download PDF
19. Pulmonary Lymphoma: A Case Series and Review of the Literature
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Sachdev A and Sidhu C
- Subjects
medicine.medical_specialty ,Series (stratigraphy) ,Pulmonary lymphoma ,business.industry ,Medicine ,business ,Dermatology - Published
- 2018
- Full Text
- View/download PDF
20. The independent association of overweight and obesity with breathlessness in adults: a cross-sectional, population-based study
- Author
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Currow, DC, Dal Grande, E, Sidhu, C, Ekström, M, and Johnson, MJ
- Subjects
Adult ,Male ,Respiratory System ,Australia ,Walk Test ,Middle Aged ,Respiratory Function Tests ,Body Mass Index ,Dyspnea ,Cross-Sectional Studies ,Risk Factors ,Prevalence ,Humans ,Cluster Analysis ,Female ,Obesity ,Independent Living ,Life Style ,Physical Conditioning, Human - Published
- 2017
21. Teens as Teachers in the Garden: Cultivating a Sustainable Model for Teaching Healthy Living
- Author
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Bolshakova, Virginia L. J., primary, Gieng, John, additional, Sidhu, C. Sheena, additional, Vollinger, Mary, additional, Gimeno, Lorena, additional, and Guild, Jessica, additional
- Published
- 2018
- Full Text
- View/download PDF
22. A global synthesis of the effects of diversified farming systems on arthropod diversity within fields and across agricultural landscapes
- Author
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Lichtenberg, Elinor M., Kennedy, Christina M., Kremen, Claire, Batáry, Péter, Berendse, Frank, Bommarco, Riccardo, Bosque-Pérez, Nilsa A., Carvalheiro, Luísa G., Snyder, William E., Williams, Neal M., Winfree, Rachael, Klatt, Björn K., Åström, Sandra, Benjamin, Faye, Brittain, Claire, Chaplin-Kramer, Rebecca, Clough, Yann, Danforth, Bryan, Diekötter, Tim, Eigenbrode, Sanford D., Ekroos, Johan, Elle, Elizabeth, Freitas, Breno M., Fukuda, Yuki, Gaines-Day, Hannah R., Grab, Heather, Gratton, Claudio, Holzschuh, Andrea, Isaacs, Rufus, Isaia, Marco, Jha, Shalene, Jonason, Dennis, Jones, Vincent P., Klein, Alexandra-Maria, Krauss, Jochen, Letourneau, Deborah K., Macfadyen, Sarina, Mallinger, Rachel E., Martin, Emily A., Martinez, Eliana, Memmott, Jane, Morandin, Lora, Neame, Lisa, Otieno, Mark, Park, Mia G., Pfiffner, Lukas, Pocock, Michael J. O., Ponce, Carlos, Potts, Simon G., Poveda, Katja, Ramos, Mariangie, Rosenheim, Jay A., Rundlöf, Maj, Sardiñas, Hillary, Saunders, Manu E., Schon, Nicole L., Sciligo, Amber R., Sidhu, C. Sheena, Steffan-Dewenter, Ingolf, Tscharntke, Teja, Veselý, Milan, Weisser, Wolfgang W., Wilson, Julianna K., Crowder, David W., Lichtenberg, Elinor M., Kennedy, Christina M., Kremen, Claire, Batáry, Péter, Berendse, Frank, Bommarco, Riccardo, Bosque-Pérez, Nilsa A., Carvalheiro, Luísa G., Snyder, William E., Williams, Neal M., Winfree, Rachael, Klatt, Björn K., Åström, Sandra, Benjamin, Faye, Brittain, Claire, Chaplin-Kramer, Rebecca, Clough, Yann, Danforth, Bryan, Diekötter, Tim, Eigenbrode, Sanford D., Ekroos, Johan, Elle, Elizabeth, Freitas, Breno M., Fukuda, Yuki, Gaines-Day, Hannah R., Grab, Heather, Gratton, Claudio, Holzschuh, Andrea, Isaacs, Rufus, Isaia, Marco, Jha, Shalene, Jonason, Dennis, Jones, Vincent P., Klein, Alexandra-Maria, Krauss, Jochen, Letourneau, Deborah K., Macfadyen, Sarina, Mallinger, Rachel E., Martin, Emily A., Martinez, Eliana, Memmott, Jane, Morandin, Lora, Neame, Lisa, Otieno, Mark, Park, Mia G., Pfiffner, Lukas, Pocock, Michael J. O., Ponce, Carlos, Potts, Simon G., Poveda, Katja, Ramos, Mariangie, Rosenheim, Jay A., Rundlöf, Maj, Sardiñas, Hillary, Saunders, Manu E., Schon, Nicole L., Sciligo, Amber R., Sidhu, C. Sheena, Steffan-Dewenter, Ingolf, Tscharntke, Teja, Veselý, Milan, Weisser, Wolfgang W., Wilson, Julianna K., and Crowder, David W.
- Abstract
Agricultural intensification is a leading cause of global biodiversity loss, which can reduce the provisioning of ecosystem services in managed ecosystems. Organic farming and plant diversification are farm management schemes that may mitigate potential ecological harm by increasing species richness and boosting related ecosystem services to agroecosystems. What remains unclear is the extent to which farm management schemes affect biodiversity components other than species richness, and whether impacts differ across spatial scales and landscape contexts. Using a global metadataset, we quantified the effects of organic farming and plant diversification on abundance, local diversity (communities within fields), and regional diversity (communities across fields) of arthropod pollinators, predators, herbivores, and detritivores. Both organic farming and higher in-field plant diversity enhanced arthropod abundance, particularly for rare taxa. This resulted in increased richness but decreased evenness. While these responses were stronger at local relative to regional scales, richness and abundance increased at both scales, and richness on farms embedded in complex relative to simple landscapes. Overall, both organic farming and in-field plant diversification exerted the strongest effects on pollinators and predators, suggesting these management schemes can facilitate ecosystem service providers without augmenting herbivore (pest) populations. Our results suggest that organic farming and plant diversification promote diverse arthropod metacommunities that may provide temporal and spatial stability of ecosystem service provisioning. Conserving diverse plant and arthropod communities in farming systems therefore requires sustainable practices that operate both within fields and across landscapes.
- Published
- 2017
- Full Text
- View/download PDF
23. A global synthesis of the effects of diversified farming systems on arthropod diversity within fields and across agricultural landscapes
- Author
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Department of Agriculture (US), European Commission, Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Lichtenberg, Elinor M., Kennedy, Cristina M., Kremen, Claire, Batáry, Péter, Berendse, F., Bommarco, Riccardo, Bosque‐Pérez, Nilsa A., Carvalheiro, Luisa G., Snyder, William E., Williams, Neal M, Winfree, Rachael, Klatt, Björn K., Åström, Sandra, Benjamin, Faye, Brittain, Claire, Chaplin‐Kramer, Rebecca, Clough, Yann, Danforth, Bryan, Diekötter, Tim, Eigenbrode, Sanford D., Ekroos, Johan, Elle, Elizabeth, Freitas, B.M., Fukuda, Yuki, Gaines‐Day, Hannah R., Grab, Heather, Gratton, Claudio, Holzschuh, Andrea, Isaacs, Rufus, Isaia, Marco, Jha, Shalene, Jonason, Denis, Jones, Vincent P., Klein, Alexandra‐Maria, Krauss, Jochen, Letourneau, Deborah K., Macfadyen, Sarina, Mallinger, Rachel E., Martin, Emily A., Martinez, Eliana, Memmott, Jane, Morandin, Lora, Neame, Lisa, Otieno, Mark, Park, Mia G., Pfiffner, Lukas, Pocock, Michael J. O., Ponce, Carlos, Potts, Simon G., Poveda, Katja, Ramos, Mariangie, Rosenheim, Jay A., Rundlöf, Maj, Sardiñas, Hillary, Saunders, Manu E., Schon, Nicole L., Sciligo, Amber R., Sidhu, C. Sheena, Steffan‐Dewenter, Ingolf, Tscharntke, Teja, Veselý, Milan, Weisser, Wolfgang, Wilson, Julianna K., Crowder, David W., Department of Agriculture (US), European Commission, Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Lichtenberg, Elinor M., Kennedy, Cristina M., Kremen, Claire, Batáry, Péter, Berendse, F., Bommarco, Riccardo, Bosque‐Pérez, Nilsa A., Carvalheiro, Luisa G., Snyder, William E., Williams, Neal M, Winfree, Rachael, Klatt, Björn K., Åström, Sandra, Benjamin, Faye, Brittain, Claire, Chaplin‐Kramer, Rebecca, Clough, Yann, Danforth, Bryan, Diekötter, Tim, Eigenbrode, Sanford D., Ekroos, Johan, Elle, Elizabeth, Freitas, B.M., Fukuda, Yuki, Gaines‐Day, Hannah R., Grab, Heather, Gratton, Claudio, Holzschuh, Andrea, Isaacs, Rufus, Isaia, Marco, Jha, Shalene, Jonason, Denis, Jones, Vincent P., Klein, Alexandra‐Maria, Krauss, Jochen, Letourneau, Deborah K., Macfadyen, Sarina, Mallinger, Rachel E., Martin, Emily A., Martinez, Eliana, Memmott, Jane, Morandin, Lora, Neame, Lisa, Otieno, Mark, Park, Mia G., Pfiffner, Lukas, Pocock, Michael J. O., Ponce, Carlos, Potts, Simon G., Poveda, Katja, Ramos, Mariangie, Rosenheim, Jay A., Rundlöf, Maj, Sardiñas, Hillary, Saunders, Manu E., Schon, Nicole L., Sciligo, Amber R., Sidhu, C. Sheena, Steffan‐Dewenter, Ingolf, Tscharntke, Teja, Veselý, Milan, Weisser, Wolfgang, Wilson, Julianna K., and Crowder, David W.
- Abstract
Agricultural intensification is a leading cause of global biodiversity loss, which can reduce the provisioning of ecosystem services in managed ecosystems. Organic farming and plant diversification are farm management schemes that may mitigate potential ecological harm by increasing species richness and boosting related ecosystem services to agroecosystems. What remains unclear is the extent to which farm management schemes affect biodiversity components other than species richness, and whether impacts differ across spatial scales and landscape contexts. Using a global metadataset, we quantified the effects of organic farming and plant diversification on abundance, local diversity (communities within fields), and regional diversity (communities across fields) of arthropod pollinators, predators, herbivores, and detritivores. Both organic farming and higher in‐field plant diversity enhanced arthropod abundance, particularly for rare taxa. This resulted in increased richness but decreased evenness. While these responses were stronger at local relative to regional scales, richness and abundance increased at both scales, and richness on farms embedded in complex relative to simple landscapes. Overall, both organic farming and in‐field plant diversification exerted the strongest effects on pollinators and predators, suggesting these management schemes can facilitate ecosystem service providers without augmenting herbivore (pest) populations. Our results suggest that organic farming and plant diversification promote diverse arthropod metacommunities that may provide temporal and spatial stability of ecosystem service provisioning. Conserving diverse plant and arthropod communities in farming systems therefore requires sustainable practices that operate both within fields and across landscapes.
- Published
- 2017
24. Local and landscape effects on bee functional guilds in pigeon pea crops in Kenya
- Author
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Otieno, M., Sidhu, C. S., Woodcock, B. A., Wilby, A., Vogiatzakis, I. N., Mauchline, A. L., Gikungu, M. W., and Potts, S. G.
- Abstract
Pollinators face many challenges within agricultural systems due to landscape changes and intensification which can affect resource availability that can impact pollination services. This paper examines pigeon pea pollination and considers how landscape context and agricultural intensification in terms of pesticide use affects the abundance of bees characterized by species guilds on crops. The study was conducted on six paired farms across a gradient of habitat complexity based on the distance of each farm from adjacent semi-natural vegetation in Kibwezi Sub-county, Kenya. \ud The study found that farms which do not use insecticides in farm management, but are in close proximity to natural habitat have greater bee guild abundance, but at further distances, overall abundance is reduced with or without insecticide use. At 1 km landscape radius, the complexity of habitats but not patch size had a positive impact on the abundance of cavity nesting bees and mason bees, which can be attributed to the interspersion of the small-holder farms with semi-natural habitats across the landscapes producing mosaics of heterogeneous habitats. The study revealed the strongest relationships between fruit set and bee abundance to be with the carpenter bee, social bee and solitary bee guilds, which are among the most abundant bees visiting pigeon pea flowers in this system. Our findings provide the foundation for conservation efforts by identifying which bee guilds pollinated pigeon peas. From this study, we suggest managing the floral and nesting resources that would best support the most abundant crop pollinators, and also reducing insecticide application to the crop.
- Published
- 2016
25. Pollinator harassment by invasive ants alters floral utilization by bees
- Author
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Wilson Rankin, Erin and Sidhu, C. Sheena
- Subjects
Social insects as biological invaders - Published
- 2014
26. Establishing Wildflower Pollinator Habitats in Agricultural Farmland to Provide Multiple Ecosystem Services
- Author
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Sidhu, C. Sheena, primary and Joshi, Neelendra K., additional
- Published
- 2016
- Full Text
- View/download PDF
27. Local and landscape effects on bee functional guilds in pigeon pea crops in Kenya
- Author
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Otieno, Mark, Sidhu, C. Sheena, Woodcock, Ben A., Wilby, Andrew, Vogiatzakis, Ioannis N., Mauchline, Alice L., Gikungu, Mary W., Potts, Simon G., Otieno, Mark, Sidhu, C. Sheena, Woodcock, Ben A., Wilby, Andrew, Vogiatzakis, Ioannis N., Mauchline, Alice L., Gikungu, Mary W., and Potts, Simon G.
- Abstract
Pollinators face many challenges within agricultural systems due to landscape changes and intensification which can affect resource availability that can impact pollination services. This paper examines pigeon pea pollination and considers how landscape context and agricultural intensification in terms of pesticide use affects the abundance of bees characterized by species guilds on crops. The study was conducted on six paired farms across a gradient of habitat complexity based on the distance of each farm from adjacent semi-natural vegetation in Kibwezi Sub-county, Kenya. The study found that farms which do not use insecticides in farm management, but are in close proximity to natural habitat have greater bee guild abundance, but at further distances, overall abundance is reduced with or without insecticide use. At 1 km landscape radius, the complexity of habitats but not patch size had a positive impact on the abundance of cavity nesting bees and mason bees, which can be attributed to the interspersion of the small-holder farms with semi-natural habitats across the landscapes producing mosaics of heterogeneous habitats. The study revealed the strongest relationships between fruit set and bee abundance to be with the carpenter bee, social bee and solitary bee guilds, which are among the most abundant bees visiting pigeon pea flowers in this system. Our findings provide the foundation for conservation efforts by identifying which bee guilds pollinated pigeon peas. From this study, we suggest managing the floral and nesting resources that would best support the most abundant crop pollinators, and also reducing insecticide application to the crop.
- Published
- 2015
28. Relationship between structure and function of dietary fibre: a comparative study of the effects of three galactomannans on cholesterol metabolism in the rat
- Author
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Oakenfull, D. G., Evans, A. J., Hood, R. L., and Sidhu, C. S.
- Published
- 1992
29. Alpha-glucans from bacterial necromass indicate an intra-population loop within the marine carbon cycle.
- Author
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Beidler I, Steinke N, Schulze T, Sidhu C, Bartosik D, Zühlke MK, Martin LT, Krull J, Dutschei T, Ferrero-Bordera B, Rielicke J, Kale V, Sura T, Trautwein-Schult A, Kirstein IV, Wiltshire KH, Teeling H, Becher D, Bengtsson MM, Hehemann JH, Bornscheuer UT, Amann RI, and Schweder T
- Subjects
- Phytoplankton metabolism, Biomass, Diatoms metabolism, Eutrophication, Carbon metabolism, Zooplankton metabolism, Polysaccharides, Bacterial metabolism, Polysaccharides, Bacterial chemistry, Bacterial Proteins metabolism, Carbon Cycle, Glucans metabolism, Bacteria metabolism, Bacteria classification, Bacteria genetics
- Abstract
Phytoplankton blooms provoke bacterioplankton blooms, from which bacterial biomass (necromass) is released via increased zooplankton grazing and viral lysis. While bacterial consumption of algal biomass during blooms is well-studied, little is known about the concurrent recycling of these substantial amounts of bacterial necromass. We demonstrate that bacterial biomass, such as bacterial alpha-glucan storage polysaccharides, generated from the consumption of algal organic matter, is reused and thus itself a major bacterial carbon source in vitro and during a diatom-dominated bloom. We highlight conserved enzymes and binding proteins of dominant bloom-responder clades that are presumably involved in the recycling of bacterial alpha-glucan by members of the bacterial community. We furthermore demonstrate that the corresponding protein machineries can be specifically induced by extracted alpha-glucan-rich bacterial polysaccharide extracts. This recycling of bacterial necromass likely constitutes a large-scale intra-population energy conservation mechanism that keeps substantial amounts of carbon in a dedicated part of the microbial loop., (© 2024. The Author(s).)
- Published
- 2024
- Full Text
- View/download PDF
30. Globally occurring pelagiphage infections create ribosome-deprived cells.
- Author
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Brüwer JD, Sidhu C, Zhao Y, Eich A, Rößler L, Orellana LH, and Fuchs BM
- Subjects
- Phytoplankton virology, Phytoplankton genetics, Phytoplankton metabolism, In Situ Hybridization, Fluorescence, Alphaproteobacteria genetics, Alphaproteobacteria metabolism, Ecosystem, Seawater microbiology, Seawater virology, Oceans and Seas, Ribosomes metabolism, Bacteriophages genetics, Bacteriophages physiology
- Abstract
Phages play an essential role in controlling bacterial populations. Those infecting Pelagibacterales (SAR11), the dominant bacteria in surface oceans, have been studied in silico and by cultivation attempts. However, little is known about the quantity of phage-infected cells in the environment. Using fluorescence in situ hybridization techniques, we here show pelagiphage-infected SAR11 cells across multiple global ecosystems and present evidence for tight community control of pelagiphages on the SAR11 hosts in a case study. Up to 19% of SAR11 cells were phage-infected during a phytoplankton bloom, coinciding with a ~90% reduction in SAR11 cell abundance within 5 days. Frequently, a fraction of the infected SAR11 cells were devoid of detectable ribosomes, which appear to be a yet undescribed possible stage during pelagiphage infection. We dubbed such cells zombies and propose, among other possible explanations, a mechanism in which ribosomal RNA is used as a resource for the synthesis of new phage genomes. On a global scale, we detected phage-infected SAR11 and zombie cells in the Atlantic, Pacific, and Southern Oceans. Our findings illuminate the important impact of pelagiphages on SAR11 populations and unveil the presence of ribosome-deprived zombie cells as part of the infection cycle., (© 2024. The Author(s).)
- Published
- 2024
- Full Text
- View/download PDF
31. Particle-attached bacteria act as gatekeepers in the decomposition of complex phytoplankton polysaccharides.
- Author
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Wang FQ, Bartosik D, Sidhu C, Siebers R, Lu DC, Trautwein-Schult A, Becher D, Huettel B, Rick J, Kirstein IV, Wiltshire KH, Schweder T, Fuchs BM, Bengtsson MM, Teeling H, and Amann RI
- Subjects
- Phytoplankton genetics, Phytoplankton metabolism, Eutrophication, Polysaccharides metabolism, Flavobacteriaceae metabolism, Microalgae metabolism
- Abstract
Background: Marine microalgae (phytoplankton) mediate almost half of the worldwide photosynthetic carbon dioxide fixation and therefore play a pivotal role in global carbon cycling, most prominently during massive phytoplankton blooms. Phytoplankton biomass consists of considerable proportions of polysaccharides, substantial parts of which are rapidly remineralized by heterotrophic bacteria. We analyzed the diversity, activity, and functional potential of such polysaccharide-degrading bacteria in different size fractions during a diverse spring phytoplankton bloom at Helgoland Roads (southern North Sea) at high temporal resolution using microscopic, physicochemical, biodiversity, metagenome, and metaproteome analyses., Results: Prominent active 0.2-3 µm free-living clades comprised Aurantivirga, "Formosa", Cd. Prosiliicoccus, NS4, NS5, Amylibacter, Planktomarina, SAR11 Ia, SAR92, and SAR86, whereas BD1-7, Stappiaceae, Nitrincolaceae, Methylophagaceae, Sulfitobacter, NS9, Polaribacter, Lentimonas, CL500-3, Algibacter, and Glaciecola dominated 3-10 µm and > 10 µm particles. Particle-attached bacteria were more diverse and exhibited more dynamic adaptive shifts over time in terms of taxonomic composition and repertoires of encoded polysaccharide-targeting enzymes. In total, 305 species-level metagenome-assembled genomes were obtained, including 152 particle-attached bacteria, 100 of which were novel for the sampling site with 76 representing new species. Compared to free-living bacteria, they featured on average larger metagenome-assembled genomes with higher proportions of polysaccharide utilization loci. The latter were predicted to target a broader spectrum of polysaccharide substrates, ranging from readily soluble, simple structured storage polysaccharides (e.g., laminarin, α-glucans) to less soluble, complex structural, or secreted polysaccharides (e.g., xylans, cellulose, pectins). In particular, the potential to target poorly soluble or complex polysaccharides was more widespread among abundant and active particle-attached bacteria., Conclusions: Particle-attached bacteria represented only 1% of all bloom-associated bacteria, yet our data suggest that many abundant active clades played a pivotal gatekeeping role in the solubilization and subsequent degradation of numerous important classes of algal glycans. The high diversity of polysaccharide niches among the most active particle-attached clades therefore is a determining factor for the proportion of algal polysaccharides that can be rapidly remineralized during generally short-lived phytoplankton bloom events. Video Abstract., (© 2024. The Author(s).)
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- 2024
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32. Erratum for Brüwer et al., " In situ cell division and mortality rates of SAR11, SAR86, Bacteroidetes , and Aurantivirga during phytoplankton blooms reveal differences in population controls".
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Brüwer JD, Orellana LH, Sidhu C, Klip HCL, Meunier CL, Boersma M, Wiltshire KH, Amann R, and Fuchs BM
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- 2024
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33. ERS International Congress 2022: highlights from the Thoracic Oncology Assembly.
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Catarata MJ, Van Geffen WH, Banka R, Ferraz B, Sidhu C, Carew A, Viola L, Gijtenbeek R, and Hardavella G
- Abstract
Thoracic malignancies are associated with a substantial public health burden. Lung cancer is the leading cause of cancer-related mortality worldwide, with significant impact on patients' quality of life. Following 2 years of virtual European Respiratory Society (ERS) Congresses due to the COVID-19 pandemic, the 2022 hybrid ERS Congress in Barcelona, Spain allowed peers from all over the world to meet again and present their work. Thoracic oncology experts presented best practices and latest developments in lung cancer screening, lung cancer diagnosis and management. Early lung cancer diagnosis, subsequent pros and cons of aggressive management, identification and management of systemic treatments' side-effects, and the application of artificial intelligence and biomarkers across all aspects of the thoracic oncology pathway were among the areas that triggered specific interest and will be summarised here., Competing Interests: Conflict of interest: M.J. Catarata has nothing to disclose. Conflict of interest: W.H. Van Geffen has nothing to disclose. Conflict of interest: R. Banka has nothing to disclose. Conflict of interest: B. Ferraz has nothing to disclose. Conflict of interest: C. Sidhu has nothing to disclose. Conflict of interest: A. Carew has nothing to disclose. Conflict of interest: L. Viola has nothing to disclose. Conflict of interest: R. Gijtenbeek has nothing to disclose. Conflict of interest: G. Hardavella has nothing to disclose., (Copyright ©The authors 2023.)
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- 2023
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34. Lung volume reduction for emphysema using one-way endobronchial valves: An Australian cohort.
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Sidhu C, Wilsmore N, Shargill N, and Rangamuwa K
- Subjects
- Humans, Pneumonectomy methods, Quality of Life, Retrospective Studies, Forced Expiratory Volume, Bronchoscopy methods, Australia, Treatment Outcome, Pneumothorax etiology, Pulmonary Emphysema etiology, Emphysema etiology
- Abstract
Emphysema can be associated with gas trapping and hyperinflation, which negatively impacts on quality of life, life expectancy, and functional capacity. Lung volume reduction (LVR) surgery can reduce gas trapping and improve mortality in select patients but carries a high risk of major complications. Bronchoscopic techniques for LVR using one-way endobronchial valves (EBV) have become an established efficacious alternative to surgery. A bi-center retrospective cohort study was conducted on patients with severe emphysema who underwent endoscopic lung volume reduction (ELVR) using Pulmonx Zephyr EBVs. Symptomatic patients with gas-trapping and hyperinflation on lung function testing were selected. Target-lobe selection was based on quantitative imaging analysis and ventilation-perfusion scintigraphy. Successful procedures were determined from clinical review, imaging and follow-up testing. Thirty-nine patients underwent ELVR. Mean pre-procedure forced expiratory volume in 1 second (FEV1) was 0.75 L, residual volume (RV) was 225% predicted and total lung capacity was 129% predicted. Most common treated-lobe was left upper lobe. Post-procedure pneumothorax occurred in 36.5% of patients with 73% requiring intercostal catheter insertion for drainage. Mean FEV1 improvement was +140 mL and 57% of patients achieved minimal clinical important difference FEV1 increase of ≥12%. Maximal mean RV change was -1010 mL with 69% of patients achieving minimal clinical important difference RV decrease of ≥350 mL. Clinician-determined success of ELVR was 78%. Procedure-related mortality was absent. LVR using EBVs is safe and can lead to significant improvements in lung function, particularly reduction of gas trapping and hyperinflation. Occurrence of pneumothorax post-procedure is a complication that must be monitored for and managed appropriately., Competing Interests: Dr Narinder Shargill is an employee of Pulmonx. Dr Nicholas Wilsmore has a consulting agreement with and has received honoraria from Pulmonx. The remaining authors have no conflicts of interest to declare. No direct funding was received for the conception of this manuscript., (Copyright © 2023 the Author(s). Published by Wolters Kluwer Health, Inc.)
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- 2023
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35. In situ cell division and mortality rates of SAR11, SAR86, Bacteroidetes , and Aurantivirga during phytoplankton blooms reveal differences in population controls.
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Brüwer JD, Orellana LH, Sidhu C, Klip HCL, Meunier CL, Boersma M, Wiltshire KH, Amann R, and Fuchs BM
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- RNA, Ribosomal, 16S genetics, In Situ Hybridization, Fluorescence, Population Control, Seawater microbiology, Bacteria, Cell Division, Bacteroidetes genetics, Phytoplankton genetics
- Abstract
Net growth of microbial populations, that is, changes in abundances over time, can be studied using 16S rRNA fluorescence in situ hybridization (FISH). However, this approach does not differentiate between mortality and cell division rates. We used FISH-based image cytometry in combination with dilution culture experiments to study net growth, cell division, and mortality rates of four bacterial taxa over two distinct phytoplankton blooms: the oligotrophs SAR11 and SAR86, and the copiotrophic phylum Bacteroidetes , and its genus Aurantivirga . Cell volumes, ribosome content, and frequency of dividing cells (FDC) co-varied over time. Among the three, FDC was the most suitable predictor to calculate cell division rates for the selected taxa. The FDC-derived cell division rates for SAR86 of up to 0.8/day and Aurantivirga of up to 1.9/day differed, as expected for oligotrophs and copiotrophs. Surprisingly, SAR11 also reached high cell division rates of up to 1.9/day, even before the onset of phytoplankton blooms. For all four taxonomic groups, the abundance-derived net growth (-0.6 to 0.5/day) was about an order of magnitude lower than the cell division rates. Consequently, mortality rates were comparably high to cell division rates, indicating that about 90% of bacterial production is recycled without apparent time lag within 1 day. Our study shows that determining taxon-specific cell division rates complements omics-based tools and provides unprecedented clues on individual bacterial growth strategies including bottom-up and top-down controls. IMPORTANCE The growth of a microbial population is often calculated from their numerical abundance over time. However, this does not take cell division and mortality rates into account, which are important for deriving ecological processes like bottom-up and top-down control. In this study, we determined growth by numerical abundance and calibrated microscopy-based methods to determine the frequency of dividing cells and subsequently calculate taxon-specific cell division rates in situ . The cell division and mortality rates of two oligotrophic (SAR11 and SAR86) and two copiotrophic ( Bacteroidetes and Aurantivirga ) taxa during two spring phytoplankton blooms showed a tight coupling for all four taxa throughout the blooms without any temporal offset. Unexpectedly, SAR11 showed high cell division rates days before the bloom while cell abundances remained constant, which is indicative of strong top-down control. Microscopy remains the method of choice to understand ecological processes like top-down and bottom-up control on a cellular level., Competing Interests: The authors declare no conflict of interest.
- Published
- 2023
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36. Comparing genomes recovered from time-series metagenomes using long- and short-read sequencing technologies.
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Orellana LH, Krüger K, Sidhu C, and Amann R
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- RNA, Ribosomal, 16S genetics, Technology, Metagenomics methods, Metagenome genetics, High-Throughput Nucleotide Sequencing methods
- Abstract
Background: Over the past years, sequencing technologies have expanded our ability to examine novel microbial metabolisms and diversity previously obscured by isolation approaches. Long-read sequencing promises to revolutionize the metagenomic field and recover less fragmented genomes from environmental samples. Nonetheless, how to best benefit from long-read sequencing and whether long-read sequencing can provide recovered genomes of similar characteristics as short-read approaches remains unclear., Results: We recovered metagenome-assembled genomes (MAGs) from the free-living fraction at four-time points during a spring bloom in the North Sea. The taxonomic composition of all MAGs recovered was comparable between technologies. However, differences consisted of higher sequencing depth for contigs and higher genome population diversity in short-read compared to long-read metagenomes. When pairing population genomes recovered from both sequencing approaches that shared ≥ 99% average nucleotide identity, long-read MAGs were composed of fewer contigs, a higher N50, and a higher number of predicted genes when compared to short-read MAGs. Moreover, 88% of the total long-read MAGs carried a 16S rRNA gene compared to only 23% of MAGs recovered from short-read metagenomes. Relative abundances for population genomes recovered using both technologies were similar, although disagreements were observed for high and low GC content MAGs., Conclusions: Our results highlight that short-read technologies recovered more MAGs and a higher number of species than long-read due to an overall higher sequencing depth. Long-read samples produced higher quality MAGs and similar species composition compared to short-read sequencing. Differences in the GC content recovered by each sequencing technology resulted in divergences in the diversity recovered and relative abundance of MAGs within the GC content boundaries., (© 2023. The Author(s).)
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- 2023
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37. Targeted alveo-pleural fistula endobronchial valve treatment using ventilation scintigraphy.
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Sidhu C, Ratnagobal S, Thomas R, Lee GYC, Drudy E, and Francis RJ
- Abstract
Persistent air-leaks can be difficult to localize in radiology. Bronchoscopic management of air-leaks requires identification of the leak's location to allow suitable targeted treatment. One-way endobronchial valves have become a suitable option for persistent air-leaks. In this report, a combination scintigraphy and one-way endobronchial valve treatment successfully resolved a persistent air-leak., Competing Interests: Gary YC Lee is an Editorial Board member of Respirology Case Reports and a co‐author of this article. They were excluded from all editorial decision‐making related to the acceptance of this article for publication. The other authors have no conflicts of interest to declare., (© 2023 The Authors. Respirology Case Reports published by John Wiley & Sons Australia, Ltd on behalf of The Asian Pacific Society of Respirology.)
- Published
- 2023
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38. Dissolved storage glycans shaped the community composition of abundant bacterioplankton clades during a North Sea spring phytoplankton bloom.
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Sidhu C, Kirstein IV, Meunier CL, Rick J, Fofonova V, Wiltshire KH, Steinke N, Vidal-Melgosa S, Hehemann JH, Huettel B, Schweder T, Fuchs BM, Amann RI, and Teeling H
- Subjects
- North Sea, Plankton genetics, Polysaccharides metabolism, Bacteria genetics, Bacteria metabolism, Phytoplankton genetics, Phytoplankton metabolism, Eutrophication
- Abstract
Background: Blooms of marine microalgae play a pivotal role in global carbon cycling. Such blooms entail successive blooms of specialized clades of planktonic bacteria that collectively remineralize gigatons of algal biomass on a global scale. This biomass is largely composed of distinct polysaccharides, and the microbial decomposition of these polysaccharides is therefore a process of prime importance., Results: In 2020, we sampled a complete biphasic spring bloom in the German Bight over a 90-day period. Bacterioplankton metagenomes from 30 time points allowed reconstruction of 251 metagenome-assembled genomes (MAGs). Corresponding metatranscriptomes highlighted 50 particularly active MAGs of the most abundant clades, including many polysaccharide degraders. Saccharide measurements together with bacterial polysaccharide utilization loci (PUL) expression data identified β-glucans (diatom laminarin) and α-glucans as the most prominent and actively metabolized dissolved polysaccharide substrates. Both substrates were consumed throughout the bloom, with α-glucan PUL expression peaking at the beginning of the second bloom phase shortly after a peak in flagellate and the nadir in bacterial total cell counts., Conclusions: We show that the amounts and composition of dissolved polysaccharides, in particular abundant storage polysaccharides, have a pronounced influence on the composition of abundant bacterioplankton members during phytoplankton blooms, some of which compete for similar polysaccharide niches. We hypothesize that besides the release of algal glycans, also recycling of bacterial glycans as a result of increased bacterial cell mortality can have a significant influence on bacterioplankton composition during phytoplankton blooms. Video Abstract., (© 2023. The Author(s).)
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- 2023
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39. Comparative Transcriptomics Sheds Light on Remodeling of Gene Expression during Diazotrophy in the Thermophilic Methanogen Methanothermococcus thermolithotrophicus.
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Maslać N, Sidhu C, Teeling H, and Wagner T
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- Nitrogen Fixation genetics, Molybdenum, Transcriptome, Nitrogenase metabolism, Nitrogen metabolism, Methanococcaceae genetics, Methanococcaceae metabolism, Euryarchaeota genetics, Ammonium Compounds
- Abstract
Some marine thermophilic methanogens are able to perform energy-consuming nitrogen fixation despite deriving only little energy from hydrogenotrophic methanogenesis. We studied this process in Methanothermococcus thermolithotrophicus DSM 2095, a methanogenic archaeon of the order Methanococcales that contributes to the nitrogen pool in some marine environments. We successfully grew this archaeon under diazotrophic conditions in both batch and fermenter cultures, reaching the highest cell density reported so far. Diazotrophic growth depended strictly on molybdenum and, in contrast to other diazotrophs, was not inhibited by tungstate or vanadium. This suggests an elaborate control of metal uptake and a specific metal recognition system for the insertion into the nitrogenase cofactor. Differential transcriptomics of M. thermolithotrophicus grown under diazotrophic conditions with ammonium-fed cultures as controls revealed upregulation of the nitrogenase machinery, including chaperones, regulators, and molybdate importers, as well as simultaneous upregulation of an ammonium transporter and a putative pathway for nitrate and nitrite utilization. The organism thus employs multiple synergistic strategies for uptake of nitrogen nutrients during the early exponential growth phase without altering transcription levels for genes involved in methanogenesis. As a counterpart, genes coding for transcription and translation processes were downregulated, highlighting the maintenance of an intricate metabolic balance to deal with energy constraints and nutrient limitations imposed by diazotrophy. This switch in the metabolic balance included unexpected processes, such as upregulation of the CRISPR-Cas system, probably caused by drastic changes in transcription levels of putative mobile and virus-like elements. IMPORTANCE The thermophilic anaerobic archaeon M. thermolithotrophicus is a particularly suitable model organism to study the coupling of methanogenesis to diazotrophy. Likewise, its capability of simultaneously reducing N
2 and CO2 into NH3 and CH4 with H2 makes it a viable target for biofuel production. We optimized M. thermolithotrophicus cultivation, resulting in considerably higher cell yields and enabling the successful establishment of N2 -fixing bioreactors. Improved understanding of the N2 fixation process would provide novel insights into metabolic adaptations that allow this energy-limited extremophile to thrive under diazotrophy, for instance, by investigating its physiology and uncharacterized nitrogenase. We demonstrated that diazotrophic growth of M. thermolithotrophicus is exclusively dependent on molybdenum, and complementary transcriptomics corroborated the expression of the molybdenum nitrogenase system. Further analyses of differentially expressed genes during diazotrophy across three cultivation time points revealed insights into the response to nitrogen limitation and the coordination of core metabolic processes.- Published
- 2022
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40. Bacterial Pneumonia Is Associated With Myocardial Fibrosis and New-Onset Left Ventricular Dysfunction.
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Rajwani A, Perera R, Dwivedi G, Lee YCG, Sidhu C, Amin S, Leong J, Hillis GS, and Waterer GW
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- 2022
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41. Antibiotic administration via indwelling peritoneal catheter to treat infected malignant ascites.
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Jayawardena T, Vekaria S, Krivinskas S, Sidhu C, Chakera A, and Lee YCG
- Abstract
Indwelling pleural catheter is an established management for malignant pleural effusions. Extending its use to patients with malignant ascites by insertion of a catheter intraperitoneally enables regular outpatient drainage and improves quality-of-life. However, indwelling pleural/peritoneal catheter (IPC/IPeC) is associated with catheter-related infections, traditionally managed with systemic antibiotics and occasionally requires catheter removal. Direct administration of antibiotics intra-abdominally via peritoneal dialysis (PD) catheters is a well-established, efficacious practice in PD-related peritonitis and minimizes systemic adverse effects. We applied the same principles to a patient with peritoneal mesothelioma who developed peritonitis 3 weeks after insertion of IPeC. Intraperitoneal vancomycin was administered via, and compatible with, the IPeC. The patient tolerated the treatment without adverse effects and made a full recovery without requiring catheter removal., Competing Interests: None declared., (© 2022 The Authors. Respirology Case Reports published by John Wiley & Sons Australia, Ltd on behalf of The Asian Pacific Society of Respirology.)
- Published
- 2022
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42. Australasian Malignant PLeural Effusion (AMPLE)-3 trial: study protocol for a multi-centre randomised study comparing indwelling pleural catheter (±talc pleurodesis) versus video-assisted thoracoscopic surgery for management of malignant pleural effusion.
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Fitzgerald DB, Sidhu C, Budgeon C, Tan AL, Read CA, Kwan BCH, Smith NA, Fysh ET, Muruganandan S, Saghaie T, Shrestha R, Badiei A, Nguyen P, Burke A, Goddard J, Windsor M, McDonald J, Wright G, Czarnecka K, Sivakumar P, Yasufuku K, Feller-Kopman DJ, Maskell NA, Murray K, and Lee YCG
- Subjects
- Catheters, Indwelling adverse effects, Drainage methods, Humans, Multicenter Studies as Topic, Pleurodesis adverse effects, Pleurodesis methods, Quality of Life, Randomized Controlled Trials as Topic, Talc, Thoracic Surgery, Video-Assisted adverse effects, Pleural Effusion, Malignant complications, Pleural Effusion, Malignant therapy
- Abstract
Introduction: Malignant pleural effusions (MPEs) are common. MPE causes significant breathlessness and impairs quality of life. Indwelling pleural catheters (IPC) allow ambulatory drainage and reduce hospital days and re-intervention rates when compared to standard talc slurry pleurodesis. Daily drainage accelerates pleurodesis, and talc instillation via the IPC has been proven feasible and safe. Surgical pleurodesis via video-assisted thoracoscopic surgery (VATS) is considered a one-off intervention for MPE and is often recommended to patients who are fit for surgery. The AMPLE-3 trial is the first randomised trial to compare IPC (±talc pleurodesis) and VATS pleurodesis in those who are fit for surgery., Methods and Analysis: A multi-centre, open-labelled randomised trial of patients with symptomatic MPE, expected survival of ≥ 6 months and good performance status randomised 1:1 to either IPC or VATS pleurodesis. Participant randomisation will be minimised for (i) cancer type (mesothelioma vs non-mesothelioma); (ii) previous pleurodesis (vs not); and (iii) trapped lung, if known (vs not). Primary outcome is the need for further ipsilateral pleural interventions over 12 months or until death, if sooner. Secondary outcomes include days in hospital, quality of life (QoL) measures, physical activity levels, safety profile, health economics, adverse events, and survival. The trial will recruit 158 participants who will be followed up for 12 months., Ethics and Dissemination: Sir Charles Gairdner and Osborne Park Health Care Group (HREC) has approved the study (reference: RGS356). Results will be published in peer-reviewed journals and presented at scientific meetings., Discussion: Both IPC and VATS are commonly used procedures for MPE. The AMPLE-3 trial will provide data to help define the merits and shortcomings of these procedures and inform future clinical care algorithms., Trial Registration: Australia New Zealand Clinical Trial Registry ACTRN12618001013257 . Registered on 18 June 2018., Protocol Version: Version 3.00/4.02.19., (© 2022. The Author(s).)
- Published
- 2022
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43. A Tropomycin-Related Kinase B Receptor Activator for the Management of Ocular Blast-Induced Vision Loss.
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Dhakal S, He L, Lyuboslavsky P, Sidhu C, Chrenek MA, Sellers JT, Boatright JH, Geisert EE, Setterholm NA, McDonald FE, and Iuvone PM
- Subjects
- Animals, Blood-Brain Barrier metabolism, Blood-Retinal Barrier metabolism, Brain-Derived Neurotrophic Factor metabolism, Mice, Mice, Inbred C57BL, Neuroprotection, Neuroprotective Agents pharmacology, Retina physiopathology, Time-to-Treatment, Treatment Outcome, Blast Injuries complications, Blindness drug therapy, Blindness etiology, Eye Injuries complications, Optic Nerve Injuries drug therapy, Optic Nerve Injuries etiology, Receptor, trkB agonists
- Abstract
Pressure waves from explosions or other traumatic events can damage the neurons of the eye and visual centers of the brain, leading to functional loss of vision. There are currently few treatments for such injuries that can be deployed rapidly to mitigate damage. Brain-derived neurotrophic factor (BDNF) and activation of its receptor tropomycin-related kinase B (TrkB) have neuroprotective effects in a number of degeneration models. Small molecule activators of TrkB, such as N-[2-(5-hydroxy-1H-indol-3-yl)ethyl]-2-oxopiperidine-3-carboxamide (HIOC), cross the blood-brain and blood-retina barriers after systemic administration. We characterize the effects of blast-induced ocular trauma on retinal and visual function. We show that systemic administration of HIOC, a potent small molecule activator of the BDNF/TrkB receptor, preserves visual function in mice exposed to ocular blast injury. The HIOC treatment for one week preserves visual function for at least four months. The HIOC treatment effectively protected vision when the initial dose was administered up to 3 h after blast, but not if the initial treatment was delayed for 24 h. We provide evidence that the therapeutic effect of HIOC is mediated by activation of BDNF/TrkB receptors. The results indicate that HIOC may be useful for managing ocular blast injury and other forms of traumatic optic neuropathy.
- Published
- 2021
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44. Corrigendum: Isolation and Taxonomic Characterization of Novel Haloarchaeal Isolates From Indian Solar Saltern: A Brief Review on Distribution of Bacteriorhodopsins and V-Type ATPases in Haloarchaea.
- Author
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Verma DK, Chaudhary C, Singh L, Sidhu C, Siddhardha B, Prasad SE, and Thakur KG
- Abstract
[This corrects the article DOI: 10.3389/fmicb.2020.554927.]., (Copyright © 2021 Verma, Chaudhary, Singh, Sidhu, Siddhardha, Prasad and Thakur.)
- Published
- 2021
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45. Recurrent hepatocellular carcinoma presenting as thoracic lymphadenopathy.
- Author
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Sidhu C and Yagnik L
- Abstract
Metastatic hepatocellular carcinoma (HCC) can involve the lung parenchyma. However, predominant thoracic lymphadenopathy involvement is less described and there are multiple alternative malignant and non-malignant causes of a similar appearance. Accurate tissue diagnosis is important to determine appropriate management and prognostication. Here, we report two cases of metastatic HCC recurrence causing large thoracic lymphadenopathy, diagnosed adequately and safely by linear endobronchial ultrasound (EBUS) transbronchial needle aspiration., (© 2021 The Authors. Respirology Case Reports published by John Wiley & Sons Australia, Ltd on behalf of The Asian Pacific Society of Respirology.)
- Published
- 2021
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46. Clump material within drainage chest tubes contains diagnostic information: a proof-of-concept case series.
- Author
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Louw A, Sidhu C, Fitzgerald DB, Creaney J, Chai SM, and Lee YCG
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- Humans, Pneumonectomy, Thorax, Chest Tubes, Drainage
- Abstract
Competing Interests: Conflict of interest: A. Louw has nothing to disclose. Conflict of interest: C. Sidhu has nothing to disclose. Conflict of interest: D.B. Fitzgerald has nothing to disclose. Conflict of interest: J. Creaney reports grants from National Health and Medical Research Council and Insurance Commission of Western Australia, during the conduct of the study. Conflict of interest: S. Chai has nothing to disclose. Conflict of interest: Y.C.G. Lee has nothing to disclose.
- Published
- 2021
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47. Ambient Light Regulates Retinal Dopamine Signaling and Myopia Susceptibility.
- Author
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Landis EG, Park HN, Chrenek M, He L, Sidhu C, Chakraborty R, Strickland R, Iuvone PM, and Pardue MT
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- Animals, Blotting, Western, Chromatography, High Pressure Liquid, Disease Models, Animal, Dopamine Plasma Membrane Transport Proteins genetics, Gene Expression Regulation physiology, Male, Mice, Mice, Inbred C57BL, Monoamine Oxidase genetics, Refraction, Ocular physiology, Signal Transduction physiology, Vesicular Monoamine Transport Proteins genetics, Visual Acuity physiology, Color Vision physiology, Dopamine metabolism, Light, Mesopic Vision physiology, Myopia metabolism, Night Vision physiology, Retina metabolism
- Abstract
Purpose: Exposure to high-intensity or outdoor lighting has been shown to decrease the severity of myopia in both human epidemiological studies and animal models. Currently, it is not fully understood how light interacts with visual signaling to impact myopia. Previous work performed in the mouse retina has demonstrated that functional rod photoreceptors are needed to develop experimentally-induced myopia, alluding to an essential role for rod signaling in refractive development., Methods: To determine whether dim rod-dominated illuminance levels influence myopia susceptibility, we housed male C57BL/6J mice under 12:12 light/dark cycles with scotopic (1.6 × 10-3 candela/m2), mesopic (1.6 × 101 cd/m2), or photopic (4.7 × 103 cd/m2) lighting from post-natal day 23 (P23) to P38. Half the mice received monocular exposure to -10 diopter (D) lens defocus from P28-38. Molecular assays to measure expression and content of DA-related genes and protein were conducted to determine how illuminance and lens defocus alter dopamine (DA) synthesis, storage, uptake, and degradation and affect myopia susceptibility in mice., Results: We found that mice exposed to either scotopic or photopic lighting developed significantly less severe myopic refractive shifts (lens treated eye minus contralateral eye; -1.62 ± 0.37D and -1.74 ± 0.44D, respectively) than mice exposed to mesopic lighting (-3.61 ± 0.50D; P < 0.005). The 3,4-dihydroxyphenylacetic acid /DA ratio, indicating DA activity, was highest under photopic light regardless of lens defocus treatment (controls: 0.09 ± 0.011 pg/mg, lens defocus: 0.08 ± 0.008 pg/mg)., Conclusions: Lens defocus interacted with ambient conditions to differentially alter myopia susceptibility and DA-related genes and proteins. Collectively, these results show that scotopic and photopic lighting protect against lens-induced myopia, potentially indicating that a broad range of light levels are important in refractive development.
- Published
- 2021
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48. Isolation and Taxonomic Characterization of Novel Haloarchaeal Isolates From Indian Solar Saltern: A Brief Review on Distribution of Bacteriorhodopsins and V-Type ATPases in Haloarchaea.
- Author
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Verma DK, Chaudhary C, Singh L, Sidhu C, Siddhardha B, Prasad SE, and Thakur KG
- Abstract
Haloarchaea inhabit high salinity environments worldwide. They are a potentially rich source of crucial biomolecules like carotenoids and industrially useful proteins. However, diversity in haloarchaea present in Indian high salinity environments is poorly studied. In the present study, we isolated 12 haloarchaeal strains from hypersaline Kottakuppam, Tamil Nadu solar saltern in India. 16S rRNA based taxonomic characterization of these isolates suggested that nine of them are novel strains that belong to genera Haloarcula, Halomicrobium , and Haloferax . Transmission electron microscopy suggests the polymorphic nature of these haloarchaeal isolates. Most of the haloarchaeal species are known to be high producers of carotenoids. We were able to isolate carotenoids from all these 12 isolates. The UV-Vis spectroscopy-based analysis suggests that bacterioruberin and lycopene are the major carotenoids produced by these isolates. Based on the visual inspection of the purified carotenoids, the isolates were classified into two broad categories i.e., yellow and orange, attributed to the differences in the ratio of bacterioruberin and lycopene as confirmed by the UV-Vis spectral analysis. Using a PCR-based screening assay, we were able to detect the presence of the bacteriorhodopsin gene ( bop ) in 11 isolates. We performed whole-genome sequencing for three bop positive and one bop negative haloarchaeal isolates. Whole-genome sequencing, followed by pan-genome analysis identified multiple unique genes involved in various biological functions. We also successfully cloned, expressed, and purified functional recombinant bacteriorhodopsin (BR) from one of the isolates using Escherichia coli as an expression host. BR has light-driven proton pumping activity resulting in the proton gradient across the membrane, which is utilized by V-Type ATPases to produce ATP. We analyzed the distribution of bop and other accessory genes involved in functional BR expression and ATP synthesis in all the representative haloarchaeal species. Our bioinformatics-based analysis of all the sequenced members of genus Haloarcula suggests that bop , if present, is usually inserted between the genes coding for B and D subunits of the V-type ATPases operon. This study provides new insights into the genomic variations in haloarchaea and reports expression of new BR variant having good expression in functional form in E. coli ., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2020 Verma, Chaudhary, Singh, Sidhu, Siddhardha, Prasad and Thakur.)
- Published
- 2020
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49. Biochemical and Taxonomic Characterization of Novel Haloarchaeal Strains and Purification of the Recombinant Halotolerant α-Amylase Discovered in the Isolate.
- Author
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Verma DK, Vasudeva G, Sidhu C, Pinnaka AK, Prasad SE, and Thakur KG
- Abstract
Haloarchaea are salt-loving archaea and potential source of industrially relevant halotolerant enzymes. In the present study, three reddish-pink, extremely halophilic archaeal strains, namely wsp1 (wsp-water sample Pondicherry), wsp3, and wsp4, were isolated from the Indian Solar saltern. The phylogenetic analysis based on 16S rRNA gene sequences suggests that both wsp3 and wsp4 strains belong to Halogeometricum borinquense while wsp1 is closely related to Haloferax volcanii species. The comparative genomics revealed an open pangenome for both genera investigated here. Whole-genome sequence analysis revealed that these isolates have multiple copies of industrially/biotechnologically important unique genes and enzymes. Among these unique enzymes, for recombinant expression and purification, we selected four putative α-amylases identified in these three isolates. We successfully purified functional halotolerant recombinant Amy2, from wsp1 using pelB signal sequence-based secretion strategy using Escherichia coli as an expression host. This method may prove useful to produce functional haloarchaeal secretory recombinant proteins suitable for commercial or research applications. Biochemical analysis of Amy2 suggests the halotolerant nature of the enzyme having maximum enzymatic activity observed at 1 M NaCl. We also report the isolation and characterization of carotenoids purified from these isolates. This study highlights the presence of several industrially important enzymes in the haloarchaeal strains which may potentially have improved features like stability and salt tolerance suitable for industrial applications., (Copyright © 2020 Verma, Vasudeva, Sidhu, Pinnaka, Prasad and Thakur.)
- Published
- 2020
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50. Structure Elucidation and Biochemical Characterization of Environmentally Relevant Novel Extradiol Dioxygenases Discovered by a Functional Metagenomics Approach.
- Author
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Sidhu C, Solanki V, Pinnaka AK, and Thakur KG
- Abstract
The release of synthetic chemical pollutants in the environment is posing serious health risks. Enzymes, including oxygenases, play a crucial role in xenobiotic degradation. In the present study, we employed a functional metagenomics approach to overcome the limitation of cultivability of microbes under standard laboratory conditions in order to isolate novel dioxygenases capable of degrading recalcitrant pollutants. Fosmid clones possessing dioxygenase activity were further sequenced, and their genes were identified using bioinformatics tools. Two positive fosmid clones, SD3 and RW1, suggested the presence of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC-SD3) and catechol 2,3-dioxygenase (C23O-RW1), respectively. Recombinant versions of these enzymes were purified to examine their pollutant-degrading abilities. The crystal structure of BphC-SD3 was determined at 2.6-Å resolution, revealing a two-domain architecture, i.e., N-terminal and C-terminal domains, with the sequential arrangement of βαβββ in each domain, characteristic of Fe-dependent class II type I extradiol dioxygenases. The structure also reveals the presence of conserved amino acids lining the catalytic pocket and Fe
3+ metal ion in the large funnel-shaped active site in the C-terminal domain. Further studies suggest that Fe3+ bound in the BphC-SD3 active site probably imparts aerobic stability. We further demonstrate the potential application of BphC-SD3 in biosensing of catecholic compounds. The halotolerant and oxygen-resistant properties of these enzymes reported in this study make them potential candidates for bioremediation and biosensing applications. IMPORTANCE The disposal and degradation of xenobiotic compounds have been serious issues due to their recalcitrant properties. Microbial oxygenases are the fundamental enzymes involved in biodegradation that oxidize the substrate by transferring oxygen from molecular oxygen. Among oxygenases, catechol dioxygenases are more versatile in biodegradation and are well studied among the bacterial world. The use of catechol dioxygenases in the field is currently not practical due to their aerobically unstable nature. The significance of our research lies in the discovery of aerobically stable and halotolerant catechol dioxygenases that are efficient in degrading the targeted environmental pollutants and, hence, could be used as cost-effective alternatives for the treatment of hypersaline industrial effluents. Moreover, the structural determination of novel catechol dioxygenases would greatly enhance our knowledge of the function of these enzymes and facilitate directed evolution to further enhance or engineer desired properties., (Copyright © 2019 Sidhu et al.)- Published
- 2019
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