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Conventional drainage techniques are often used to speed up consolidation of fine sediment. These techniques are relatively expensive, are invasive and often degrade the natural value of the ecosystem. This paper focusses on exploring an alternative approach that uses natural processes, rather than a technological solution, to speed up drainage of soft cohesive sediment. In a controlled column experiment, we studied how Phragmites australis can act as an ecological engineer that enhances drainage, thereby potentially promoting sediment consolidation. We measured the dynamics of pore water pressures at 10 cm depth intervals during a 129-day period in a column with and without plants, while the water level was fixed. Water loss via evaporation was measured using Mariotte bottles and the photosynthetic processes – including plant transpiration – were measured with a LICOR photosynthesis system. The results show that several processes initiated by P. australis interfere with the physical processes involved in sediment drainage and consolidation. Phragmites australis effectively altered the pore pressure gradient via water extraction, especially between 40 and 60 cm from the bottom of the column. In this zone, daily cycles in pore pressures were observed which could directly be linked to the diurnal cycle of stomatal gas exchange. On average, water loss via evaporation and transpiration of leaves of P. australis amounted to 3.9 mm day−1, whereas evaporation of bare soil amounted on average to 0.6 mm day−1. Moreover, the depth-averaged hydraulic conductivity increased on average by 40 % in presence of P. australis. The results presented in this study provide information needed for predictive modelling of plants as ecological engineers to speed up soil forming processes in the construction of wetlands with soft cohesive sediment.