22 results on '"Kucukhuseyin O"'
Search Results
2. The effect of growth hormone receptor (GHR) exon-3 polymorphism on diabetes and coronary heart disase: SW04.S16–224
- Author
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Kucukhuseyin, O., Toptas, B., Timirci-Kahraman, O., Isbir, S., Karsidag, K., and Isbir, T.
- Published
- 2013
3. Effects of spesific cyclooxygenase-1 A-842G/C50T gene variation on type 2 diabetes mellitus: SW04.S16–60
- Author
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Timirci-Kahraman, O., Kucukhuseyin, O., Toptas, B., Isbir, S., Karsidag, K., and Isbir, T.
- Published
- 2013
4. Is there any association between the variants of receptor for advanced glycation end products (RAGEs) and obesity?: SW04.S16–57
- Author
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Yaylim, I., Kucukhuseyin, O., Hande Karagedik, E., Torun, E., Ozgen, T., Yilmaz-Aydogan, H., and Ergen, Arzu H.
- Published
- 2013
5. The effects of Advanced Glycation End Products (RAGE)-374T/A and Gly82Ser variants and soluble-RAGE levels to obesity in children
- Author
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Kucukhuseyin, O., Ozgen, T., Karagedik, E. H., Cesur, YAŞAR, Aydogan, H. Yilmaz, Yaylim, I., Ergen, H. A., and CESUR, Yaşar
- Subjects
Kucukhuseyin O., Ozgen T., Karagedik E. H. , Cesur Y., Aydogan H. Y. , Yaylim I., Ergen H. A. , -The effects of Advanced Glycation End Products (RAGE)-374T/A and Gly82Ser variants and soluble-RAGE levels to obesity in children-, CELLULAR AND MOLECULAR BIOLOGY, cilt.62, ss.9-14, 2016 - Abstract
In recent years, studies related to advanced glycation end products (AGE) and their interaction with their receptors (RAGE) have advanced our knowledge of the roles of these molecules in different diseases. However, studies concerning AGE-RAGE interaction in obesity are limited and the results are conflicting. RAGE gene is located on 6p21.3, has several polymorphic sites including -374T/A, a functional polymorphism in the promoter region, and Gly82Ser, present within the ligand-binding domain. In the present study, the determination of possible risks in the development of obesity according to RAGE polymorhisms and plasma levels of RAGE (sRAGE) was aimed. 87 obese and 78 healthy children were included in this study. Genomic DNA was isolated with salting-out procedure. RAGE polymorphisms were analyzed by PCR based techniques. In contrast to Gly82Ser, -374T/A allelic and genotypic frequencies were not different between study groups. Ser(SerSer+GlySer genotype) allele frequency was higher in obese cases than controls (74.20%-> 25.80%, OR: 2.573,95% CI:1.789-3.699; p 87.00 +/- 1.16; p=0.025) and HDL-C (46.14 +/- 2.75 -> 39.84 +/- 1.82;p=0.057) levels were higher than TT genotype carriers. As for Gly82Ser polymorphism, HDL-C (p=0.004) and FT4 (p=0.020) levels were different in obese cases, the order was SerSer>GlySer>GlyGly for HDL-C, and opposite for FT4. Besides, Ser carriers had lower insulin (p=0.038) and homa-IR (p=0.081) levels than GG genotype. sRAGE levels were different between obese and control seperately or in combination with RAGE polymorphisms (pTA>AA for -374T/A and SerSer>GlyGly>GlySer for Gly82Ser. According to our results SerSer genotype could have significant effects on sRAGE levels, and increased sRAGE levels and Gly82Ser polymorphism either combinatorially or seperately increased the propensity towards obesity. İstanbul Üniversitesi
- Published
- 2016
6. F-063IS THERE ANY CORRELATION BETWEEN CDKN2 P16 AND MDM2 VARIANTS AND PROGNOSIS IN LUNG CANCER PATIENTS?
- Author
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Turna, Akif, primary, Hekimoglu, E., additional, Yenilmez, E., additional, Turan, S., additional, Kucukhuseyin, O., additional, Kaynak, K., additional, and Yaylim, I., additional
- Published
- 2015
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7. Is there any relationship between LGALS3 gene variations and histopathological criteria in laryngeal squamous cell carcinoma (LSCC)?
- Author
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Horozoglu Cem, Demirkol Seyda, Verim Aysegul, Sonmez Dilara, Sürmen Saime, Kucukhuseyin Ozlem, Zeybek Umit, and Yaylim Ilhan
- Subjects
galectin-3 ,lgals3 ,lscc ,rs4644 ,rs4652 ,galektin-3 ,Biochemistry ,QD415-436 - Abstract
Genetic variations of LGALS3 (Galectin-3) were found to be associated with treatment resistance, mortality, recurrence, high tumor volume and multiple tumor involvement in solid organ cancers. The modulators of extracellular matrix (ECM), which is a dynamic factor in the larynx tissue with high biomechanical and regenerating ability, can play an important role. We aimed to investigate the relationship between the genetic variants of LGALS3, one of these modulators, with Laryngeal Squamous Cell Carcinoma (LSCC).
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- 2021
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8. P-138TRAIL GENE POLYMORPHISM IS ASSOCIATED WITH THE RISK OF NON-SMALL CELL LUNG CANCER IN STAGE IIB-IIIB PATIENTS
- Author
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Turna, Akif, primary, Cacina, C., additional, Turan, S., additional, Özkan, N.E., additional, Toptas, B., additional, Kucukhuseyin, O., additional, Hekimoglu, E., additional, Kaynak, K., additional, and Yaylim, I., additional
- Published
- 2013
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9. Receptor for advanced glycation end products polymorphisms in coronary artery ectasia.
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Aslan EI, Ozkara G, Kilicarslan O, Ser OS, Bostan C, Yildiz A, Diren Borekcioglu A, Ozturk O, Kucukhuseyin O, and Yilmaz Aydogan H
- Subjects
- Humans, Female, Male, Middle Aged, Prospective Studies, Aged, Dilatation, Pathologic genetics, Genetic Predisposition to Disease, Scavenger Receptors, Class E genetics, Coronary Vessels metabolism, Coronary Vessels pathology, Case-Control Studies, Alleles, Coronary Angiography, Gene Frequency, Genotype, LDL-Receptor Related Proteins, Membrane Transport Proteins, Receptor for Advanced Glycation End Products genetics, Receptor for Advanced Glycation End Products blood, Polymorphism, Single Nucleotide, Coronary Artery Disease genetics, Coronary Artery Disease blood
- Abstract
Background: Although the implication of receptor of advanced glycation endproducts (RAGE) has been reported in coronary artery disease, its roles in coronary artery ectasia (CAE) have remained undetermined. Furthermore, the effect of RAGE polymorfisms were not well-defined in scope of soluble RAGE (sRAGE) levels. Thus, we aimed to investigate the influence of the functional polymorphisms of RAGE -374T > A (rs1800624) and G82S (rs2070600) in CAE development., Methods: This prospective observational study was conducted in 2 groups selected of 2452 patients who underwent elective coronary angiography (CAG) for evaluation after positive noninvasive heart tests. Group-I included 98 patients with non-obstructive coronary artery disease and CAE, and Group-II (control) included 100 patients with normal coronary arteries. SNPs were genotyped by real-time PCR using Taqman® genotyping assay. Serum sRAGE and soluble lectin-like oxidized receptor-1 (sOLR1) were assayed by ELISA and serum lipids were measured enzymatically., Results: The frequencies of the RAGE -374A allele and -374AA genotype were significantly higher in CAE patients compared to controls (p < 0.001). sRAGE levels were not different between study groups, while sOLR1 levels were elevated in CAE (p = 0.004). In controls without systemic disease, -374A allele was associated with low sRAGE levels (p < 0.05), but this association was not significant in controls with HT. Similarly, sRAGE levels of CAE patients with both HT and T2DM were higher than those no systemic disease (p = 0.02). The -374A allele was also associated with younger patient age and higher platelet count in the CAE group in both total and subgroup analyses. In the correlation analyses, the -374A allele was also negatively correlated with age and positively correlated with Plt in all of these CAE groups. In the total CAE group, sRAGE levels also showed a positive correlation with age and a negative correlation with HDL-cholesterol levels. On the other hand, a negative correlation was observed between sRAGE and Plt in the total, hypertensive and no systemic disease control subgroups. Multivariate logistic regression analysis confirmed that the -374A allele (p < 0.001), hyperlipidemia (p < 0.05), and high sOLR1 level (p < 0.05) are risk factors for CAE. ROC curve analysis shows that RAGE -374A allele has AUC of 0.713 (sensitivity: 83.7 %, specificity: 59.0 %), which is higher than HLD (sensitivity: 59.2 %, specificity: 69.0 %), HT (sensitivity: 62.4 %, specificity: 61.1 %) and high sOLR1 level (≥0.67 ng/ml)) (sensitivity: 59.8 %, specificity: 58.5 %)., Conclusion: Beside the demonstration of the relationship between -374A allele and increased risk of CAE for the first time, our results indicate that antihypertensive and antidiabetic treatment in CAE patients causes an increase in sRAGE levels. The lack of an association between the expected -374A allele and low sRAGE levels in total CAE group was attributed to the high proportion of hypertensive patients and hence to antihypertensive treatment. Moreover, the RAGE -374A allele is associated with younger age at CAE and higher Plt, suggesting that -374A may also be associated with platelet activation, which plays a role in the pathogenesis of CAE. However, our data need to be confirmed in a large study for definitive conclusions., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)
- Published
- 2024
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10. Peroxisome Proliferator-Activated Receptor Gamma Pro12Ala/C161T Genotypes and Risky Haplotype Altering Risk of Breast Cancer: A Turkish Case-Control Study.
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Unal E, Aslan EI, Ozturk T, Kurnaz Gomleksiz O, Kucukhuseyin O, Tuzuner MB, Seyhan MF, Ozturk O, and Yilmaz Aydogan H
- Subjects
- Case-Control Studies, Female, Genotype, Haplotypes, Humans, Middle Aged, Polymorphism, Single Nucleotide, Risk Factors, Breast Neoplasms genetics, PPAR gamma genetics
- Abstract
Breast cancer (BC) has a high incidence rate among women worldwide, and the mechanisms and etiology of this disease are not yet fully understood. The peroxisome proliferator-activated receptor gamma (PPARgamma), a nuclear hormone receptor that plays important roles in energy metabolism and cellular differentiation, is also suggested to be effective in cancer development. However, the results of studies investigating the cancer association with PPARgamma are inconsistent, creating a need for further investigation of the effects of this transcription factor on BC risk. We have examined the Pro12Ala-(rs1801282) and C161T-(rs3856806) polymorphisms of the PPARgamma gene in Turkish patients with BC in this case-control study. A total of 95 women diagnosed with BC as cases and 119 controls were genotyped for PPARgamma polymorphisms by polymerase chain reaction and restriction fragment length polymorphism techniques. The ProPro genotype and T161 allele were associated with an increased risk of BC comparing with the Ala12 allele and CC161 genotype, respectively (p < 0.001). The multivariate regression analysis confirmed that the ProPro genotype (p < 0.011), T161 allele (p < 0.001), smoking (p = 0.019), and advanced age (> 60 years) (p = 0.007) are risk factors for breast cancer. We also found that the PPARgamma Pro12Ala and C161T polymorphisms were in linkage disequilibrium (D':0.511, r
2 :0.099). It was determined that carrying ProPro-T161 risky PPARgamma haplotype was associated with a higher risk of BC compared to protective Ala12-CC161 haplotype (p < 0.01, OR:7.797, 95% CI:3.521-17.263). We concluded that PPARgamma Pro12Ala and C161T polymorphisms are associated with increased BC risk, and ProPro-T161 risky haplotype, which is in linkage disequilibrium, increases this effect., (© 2021. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)- Published
- 2021
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11. Determination of genetic changes of Rev-erb beta and Rev-erb alpha genes in Type 2 diabetes mellitus by next-generation sequencing.
- Author
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Tokat B, Kanca-Demirci D, Gul N, Satman I, Ozturk O, Ozder A, Kucukhuseyin O, and Yilmaz-Aydogan H
- Subjects
- Diabetes Mellitus, Type 2 pathology, Female, Humans, Male, Middle Aged, Diabetes Mellitus, Type 2 genetics, Nuclear Receptor Subfamily 1, Group D, Member 1 genetics, Polymorphism, Single Nucleotide, Receptors, Cytoplasmic and Nuclear genetics, Repressor Proteins genetics
- Abstract
Background: The nuclear receptors Rev-erb alpha and Rev-erb beta are transcription factors that regulate the function of genes in glucose and lipid metabolism, and they also form a link between circadian rhythm and metabolism. We evaluated the variations in Rev-erb alpha and Rev-erb beta genes together with biochemical parameters as risk factors in type 2 diabetic (T2DM) patients., Methods: Molecular analyses of Rev-erb alpha and Rev-erb beta genes were performed on genomic DNA by using next-generation sequencing in 42 T2DM patients (21 obese and 21 non-obese) and 66 healthy controls., Results: We found 26 rare mutations in the study groups, including 13 missense mutations, 9 silent mutations, 3 5'UTR variations, and a 3'UTR variation, of which 9 were novel variations (5 missense and 3 silent and 1 5'UTR). Six common variations were also found in the Rev-erb genes; Rev-erb beta Chr3:24003765 A > G, Rev-erb beta rs924403442 (Chr3:24006717) G > T, Rev-erb alpha Chr17:38253751 T > C, Rev-erb alpha rs72836608 C > A, Rev-erb alpha rs2314339 C > T and Rev-erb alpha rs2102928 C > T. Of these, Rev-erb beta Chr3:24003765 A > G was a novel missense mutation (p.Q197R), while others were identified as intronic variants. T2DM patients with Rev-erb beta rs924403442 T allele had lower body surface area (BSA) than noncarriers (GG genotype) (p = 0.039). Rev-erb alpha rs72836608 A allele and Rev-erb alpha rs2314339 CC genotype were associated with decreased serum HDL-cholesterol levels in T2DM patients (p = 0.025 and p = 0.027, respectively). In our study, different effects of Rev-erbs polymorphisms were found according to gender and presence of obesity. Rev-erb alpha rs72836608 (C > A) and rs2314339 (C > T) and Rev-erb alpha rs2102928 (C > T) were associated with low HDL-C levels in male T2DM patients. In female patients, Rev-erb alpha rs2102928 (C > T) was associated with high microalbuminuria and Rev-erb beta rs9244403442 G > T was associated with low HDL and high BSA values. In addition, Rev-erb alpha Chr17: 38,253,751 (T > C), rs72836608 (C > A), and rs2314339 (C > T) and Rev-erb beta Chr3:24003765 (A > G) were associated with increased serum GGT levels in obese T2DM patients. In non-obese patients, Rev-erbs SNPs had no effect on serum GGT levels., Conclusion: Our findings indicate that variations in the Rev-erb alpha and Rev-erb beta genes can affect metabolic changes in T2DM and these effects may vary depending on gender and obesity., (Copyright © 2020 Elsevier B.V. All rights reserved.)
- Published
- 2020
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12. Are IVS4 SNPs of OLR1 gene associated with coronary artery disease: Is there a linkage between IVS4 SNPs?
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Kurnaz-Gomleksiz O, Kucukhuseyin O, Ozkok E, Bugra Z, Ozturk O, and Yilmaz-Aydogan H
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- Case-Control Studies, Coronary Artery Disease etiology, Gene Frequency, Genotype, Humans, Linkage Disequilibrium, Coronary Artery Disease genetics, Genetic Predisposition to Disease, Polymorphism, Single Nucleotide, Scavenger Receptors, Class E genetics
- Abstract
Background: The OLR1 gene has been identified as a candidate gene for coronary artery disease (CAD). Six single-nucleotide polymorphisms (SNPs) of the OLR1 gene located within intron 4 (IVS4-27G>C, IVS4-73C>T, IVS4-14A>G), intron 5 (IVS5-70A>G, IVS5-27G>T) and 3'UTR (188C>T) comprise a linkage disequilibrium (LD) block, which is strongly associated with the elevated risk of CAD., Objectives: We aimed to investigate the effects of the OLR1 IVS4-14A>G and -73C>T SNPs on metabolic parameters in Turkish CAD patients, and the linkage between these 2 genetic variants., Material and Methods: The present study was carried out in 97 CAD patients and 78 healthy individuals. The OLR1 IVS4 genotypings were performed by polymerase chain reaction - restriction fragment length polymorphism (PCR-RFLP) method., Results: Serum high-density lipoprotein (HDL) cholesterol levels and body mass index (BMI) were higher in control subjects with IVS4-73CC genotype than in T allele carriers (CT+TT) (respectively, p = 0.002 and p = 0.024), while BMI values were lower in patients with CC genotype (p = 0.046). Patients with IVS4-14G allele (AG+GG) had a statistically higher low-density lipoprotein (LDL) cholesterol level (p = 0.027) than patients with -14AA genotype. Also the systolic blood pressure (SBP) levels were statistically higher in IVS4- 73C allele carriers (CT+CC) than in non-carriers (TT) (p = 0.045). A strong linkage between IVS4-14A>G and -73C>T SNPs of the OLR1 gene was detected in patients (D > 0.76)., Conclusions: Our results indicated that the intron 4-14A>G and -73C>T SNPs of the OLR1 gene can be inherited together. The present data also suggests that the OLR1 gene may contribute to the development of hypercholesterolemia in patients with CAD.
- Published
- 2018
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13. The Role of p16 and MDM2 Gene Polymorphisms in Prolactinoma: MDM2 Gene Polymorphisms May Be Associated with Tumor Shrinkage.
- Author
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Turgut S, Ilhan M, Turan S, Karaman O, Yaylim I, Kucukhuseyin O, and Tasan E
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- Adult, Case-Control Studies, Cell Transformation, Neoplastic genetics, Cell Transformation, Neoplastic pathology, Female, Genotype, Humans, Male, Pituitary Neoplasms pathology, Prolactinoma pathology, Prospective Studies, Cyclin-Dependent Kinase Inhibitor p16 genetics, Genetic Predisposition to Disease genetics, Pituitary Neoplasms genetics, Polymorphism, Genetic genetics, Prolactinoma genetics, Proto-Oncogene Proteins c-mdm2 genetics
- Abstract
Aim: Prolactinomas are thought to arise from clonal expansion of a single mutated cell which is subjected to growth stimuli of several permissive factors, although the pathogenetic mechanisms underlying tumorigenesis remain unclear. The present study aimed to investigate the role of p16 (540C→G and 580C→T) and mouse double minute 2 (MDM2) (SNP309T→G) gene polymorphisms in tumorigenesis and characteristics of prolactinoma., Patients and Methods: A total of 74 patients with prolactinoma and 100 age- and gender-matched healthy individuals were enrolled in the study. Serum prolactin levels were measured by enzyme-linked immunosorbent assay (ELISA). p16 and MDM2 polymorphisms were determined by polymerase chain reaction-restriction fragment polymorphism and agarose gel electrophoresis., Results: p16 540C→G genotype distribution was found to be: CC: 66.2%, CG: 28.4%, GG: 5.4%; p16 580C→T genotype distribution was found to be: CC: 82.4%, CT: 17.6%, TT: 0% and MDM2 genotype distribution was found to be: TT: 31.1%, TG: 47.3%, GG: 21.6% in patients with prolactinoma. Tumor diameter before treatment was correlated with prolactin levels before treatment and percentage of prolactin decrease with treatment (r=0.719, p<0.001, p=0.034 r=0.256, respectively). The number of patients with tumor size decrease of more than 50% in those with homozygous genotype (TT+GG) of MDM2 SNP309T→G was significantly higher than in heterozygous genotype (TG) carriers (odds ratio(OR)=0.18, 95% confidence interval(CI)=0.06-0.58; p=0.003)., Conclusion: This study showed that p16 and MDM2 polymorphisms do not play a decisive role in tumorigenesis, but some genotypes of these polymorphisms might be associated with follow-up characteristics of prolactinoma., (Copyright© 2017, International Institute of Anticancer Research (Dr. George J. Delinasios), All rights reserved.)
- Published
- 2017
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14. Apoptosis-inducing Effect of a Palladium(II) Complex-[PdCl(terpy)](sac).2H2O] on Ehrlich Ascites Carcinoma (EAC) in Mice.
- Author
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Ikitimur-Armutak EI, Ulukaya E, Gurel-Gurevin E, Yaylim I, Isbilen-Basok B, Sennazli G, Yuzbasioglu-Ozturk G, Sonmez K, Celik F, Kucukhuseyin O, Korkmaz G, Yilmaz VT, and Zeybek SU
- Subjects
- Animals, Antineoplastic Agents pharmacology, Carcinoma, Ehrlich Tumor drug therapy, Carcinoma, Ehrlich Tumor metabolism, Cell Proliferation drug effects, Cisplatin pharmacology, Coordination Complexes chemistry, Drug Therapy, Combination, Female, Immunoenzyme Techniques, Mice, Mice, Inbred BALB C, Apoptosis drug effects, Apoptosis Inducing Factor pharmacology, Carcinoma, Ehrlich Tumor pathology, Coordination Complexes pharmacology, Palladium chemistry
- Abstract
Background/aim: New compounds for cancer treatment are needed due to persistenly unsatisfactory management of cancer. [PdCl(terpy)](sac)·2H2O] (sac=saccharinate, and terpy=2,2':6',2"-terpyridine) is a compound synthesized for this purpose. We investigated its anti-proliferative and pro-apoptotic effects on Ehrlich Ascites Carcinoma (EAC) in vivo., Materials and Methods: 42 Balb-c female mice were subcutaneously (s.c.) injected with EAC cells (1st day) and then randomly divided into 5 groups: control (0.9% NaCl), complex (2 mg/kg), complex (3 mg/kg) cisplatin (4 mg/kg) and paclitaxel (12.5 mg/kg). On the 5th and 12th day animals were drug administrated. At 14th day, animals were sacrificed. Expression of cell death and/or cell cycle-related markers (Bcl-2, Bax, active caspase-3, p53, PCNA) and apoptosis were investigated immunohisto-chemically. Survival-related markers (Akt, GSK-3β, IGF-1R, IR, IRS-1, p70S6K, PRAS40) were evaluated by luminex analysis., Results: Expression of p53, PCNA, Bcl-2 was found decreased (p<0.001) and that of active caspase-3, Bax, and apoptotic cells was found increased (p<0.001) in all groups. The survival-related markers did not show any statistical difference in complex groups., Conclusion: The Pd(II)-complex seems to have a strong anticancer activity on EAC by inducing apoptosis via both suppression of proliferation and activation of apoptosis in vivo, similar to the effects of cisplatin and paclitaxel., (Copyright © 2016 International Institute of Anticancer Research (Dr. John G. Delinassios), All rights reserved.)
- Published
- 2016
15. Association of CTLA4 and CD28 Gene Variants and Circulating Levels of Their Proteins in Patients with Breast Cancer.
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Isitmangil G, Gurleyik G, Aker FV, Coskun C, Kucukhuseyin O, Arikan S, Turan S, Talu CK, Dogan MB, Farooqi AA, and Yaylim I
- Subjects
- Biomarkers, Tumor blood, Breast Neoplasms pathology, CD28 Antigens blood, CTLA-4 Antigen blood, Case-Control Studies, Enzyme-Linked Immunosorbent Assay, Female, Humans, Lymphatic Metastasis, Middle Aged, Neoplasm Invasiveness, Polymerase Chain Reaction, Polymorphism, Restriction Fragment Length, Prognosis, Biomarkers, Tumor genetics, Breast Neoplasms blood, Breast Neoplasms genetics, CD28 Antigens genetics, CTLA-4 Antigen genetics
- Abstract
Background/aim: Breast cancer is one of the most common and lethal types of cancer among women. We focused on the importance of the immune system in the etiology of breast cancer by investigating critical polymorphisms of cytotoxic T-lymphocyte-associated protein 4 (CTLA4) and cluster of differentiation 28 (CD28) gene, and circulating levels of these proteins., Materials and Methods: A total of 79 patients with breast cancer and 76 healthy controls were enrolled. Molecular assessment of CTLA4 (rs231775&rs5742909) and CD28 (rs3116496) variants were determined with polymerase chain reaction restriction fragment length polymorphism techniques. Circulating levels of soluble forms of CTLA4 and CD28 were analyzed by ELISA., Results: Although no significant association was found between study groups, CTLA4 +49AA genotypic frequency, and sCTLA4 and sCD28 levels were higher in patients. Some clinicopathological features were also related with CTLA4 and CD28 variants and blood levels., Conclusion: While CTLA4 +49AA genotype is increased in patients with breast cancer, the CTLA4 -318T allele may have a prognostic value. In addition, sCTLA4 and sCD28 can be used for diagnostic purposes in patients with breast cancer., (Copyright © 2016 International Institute of Anticancer Research (Dr. John G. Delinassios), All rights reserved.)
- Published
- 2016
16. Individual and Combined Effects of CTLA4-CD28 Variants and Oxidant-Antioxidant Status on the Development of Colorectal Cancer.
- Author
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Kucukhuseyin O, Turan S, Yanar K, Arikan S, Duzkoylu Y, Aydin S, Cakatay U, Mezani B, Farooqi AA, Isitmangil GA, Kiran B, Cacina C, Yenilmez EN, Ergen A, Zeybek U, and Yaylim I
- Subjects
- Advanced Oxidation Protein Products metabolism, Aged, CD28 Antigens blood, CTLA-4 Antigen blood, Case-Control Studies, Colorectal Neoplasms blood, Colorectal Neoplasms genetics, Female, Humans, Lipid Peroxidation, Male, Middle Aged, Protein Carbonylation, Spectrophotometry, CD28 Antigens genetics, CTLA-4 Antigen genetics, Colorectal Neoplasms pathology, Oxidative Stress, Polymorphism, Single Nucleotide
- Abstract
Background: Colorectal cancer (CRC) is the third most frequent cancer worldwide. Research has revealed the contributions of the immune system and anti-inflammatory pathways in the development of cancer. The balance between cluster of differentiation 28 (CD28) and cytotoxic T-lymphocyte-associated protein 4 (CTLA4) signaling is important for the regulation of immune responses. The oxidant-antioxidant balance by sustaining redox control via several defense mechanisms is also an important factor for the progression of cancer. The aim of the present study was to determine the distribution of CTLA4/CD28 variants and oxidant-antioxidant status in patients with CRC., Materials and Methods: This study enrolled 80 patients with CRC and 115 healthy controls. We used a spectrophotometric assay to detect the levels of lipid peroxidation products malon dialdehyde (MDA) and lipid hydroperoxide (LHP), and measured the concentration of protein damage products, advanced oxidation protein products (AOPP) and protein carbonyl (PCO). Additionally, antioxidant levels were detected by measuring copper, zinc, superoxide dismutase (Zn-Cu SOD) and total thiol (T-SH) levels, and advanced glycation end-products (AGEs). The CTLA4 -318C>T, CTLA4 49A>G and CD28C>T genotypes were determined by using restriction enzymes., Results: AOPP and PCO levels were increased in patients with CRC as well as those of LHP, MDA and AGE, while the levels of antioxidants such as Cu-Zn SOD and T-SH were lower. Lower serum levels of CTLA4 and higher serum levels of CD28 were detected in patients and, an association of the CTLA4 -318C/T polymorphism was found in patients with CRC., Conclusion: Our oxidative stress was increased in patients with CRC, suggesting the contribution of this disturbed oxidative status to serum CTLA4 and CD28 levels, and to the pathogenesis of CRC., (Copyright© 2015 International Institute of Anticancer Research (Dr. John G. Delinassios), All rights reserved.)
- Published
- 2015
17. Preliminary Study: Prominent miRNAs of Breast Malignant Tissues Compared to Normal Tissues in Turkish Patients with Breast Cancer.
- Author
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Ozturk T, Kucukhuseyin O, Eronat AP, Tuzuner MB, Daglar-Aday A, Saygili N, Kisakesen HI, Seyhan F, Velidedeoğlu M, Calay Z, Ilvan Ş, Yilmaz-Aydoğan H, Ozturk O, and Isbir T
- Subjects
- Adult, Aged, Aged, 80 and over, Case-Control Studies, Female, Gene Expression Regulation, Neoplastic, Humans, Lymphatic Metastasis, Middle Aged, Turkey, Breast Neoplasms genetics, Breast Neoplasms pathology, MicroRNAs genetics
- Abstract
miRNA involvement has been observed in almost every type of cancer, including breast cancer. The etiology of abnormal expression of miRNAs in cancer is still not clearly understood. In order to obtain insight into miRNA de-regulation in breast cancer, we analyzed expression levels of five breast cancer-related miRNAs, miRNA21, miRNA155, miRNA19a, miRNA17-5p and let7a miRNA, in both malignant and neighboring non-tumoral paraffin-embedded tissues of 47 patients with invasive ductal breast cancer. The targeted miRNAs, and a reference snRNA, U6, were analyzed by real-time polymerase chain reaction. let7a Levels were significantly lower in patients with lymphatic invasion than in those without (p=0.047). miR21 was down-regulated in 93.3% of patients with necrosis [p=0.017 (Fisher's exact test (FE))], while at least one oncogenic miRNA was up-regulated in 87.3% of the patients with invasive ductal carcinoma [p=0.009 (FE)]. In addition, tumor-suppressor miRNA was down-regulated or unaltered in 65.8% of the patients with tumor grade 2 or 3 and in all with grade 1 [p=0.047 (FE)]. Based on this preliminary study, we suggest that these miRNAs, especially let7a and miRNA21, might be useful markers in follow-up of breast cancer and in prognosis., (Copyright© 2015 International Institute of Anticancer Research (Dr. John G. Delinassios), All rights reserved.)
- Published
- 2015
18. The Effect of GHR/exon-3 Polymorphism and Serum GH, IGF-1 and IGFBP-3 Levels in Diabetes and Coronary Heart Disease.
- Author
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Kucukhuseyin O, Toptas B, Timirci-Kahraman O, Isbir S, Karsidag K, and Isbir T
- Subjects
- Aged, Coronary Disease blood, Diabetes Mellitus, Type 2 blood, Female, Gene Frequency, Genetic Association Studies, Genetic Predisposition to Disease, Humans, Insulin blood, Male, Middle Aged, Polymorphism, Genetic, Risk Factors, Coronary Disease genetics, Diabetes Mellitus, Type 2 genetics, Growth Hormone blood, Insulin-Like Growth Factor Binding Protein 3 blood, Insulin-Like Growth Factor I metabolism, Receptors, Somatotropin genetics
- Abstract
Aim: The present study investigated the effects of growth hormone (GH), insulin-like growth factor-1 (IGF-1), insulin-like growth factor binding protein-3 (IGFBP-3) and GH-receptor (GHR)/exon-3 polymorphism on diabetes mellitus (DM) and coronary heart disease (CHD) patients., Patients and Methods: Ninety patients with CHD, 90 patients with DM and 96 controls were included in this study. The GH, IGF-1 and IGFBP-3 serum levels were measured with enzyme-linked immunosorbent assay. GHR/exon-3 variants were determined by multiplex-polymerase chain reaction., Results: The frequency of all alleles and genotypes in all study groups were distributed according to the Hardy-Weinberg equilibrium. In addition, any association between GHR/exon-3 variants and the presence of risk factors were detected. The blood levels of GH, IGF-1 and IGFBP-3 were not distributed according to GHR/exon-3 variants. However, in the DM group, higher levels of IGF-1 and lower levels of GH and IGFBP-3, and in CHD group lower levels of IGF-1, GH and IGFBP-3 were observed. The order of GH levels were DM
- Published
- 2015
19. The association of MTHFR C677T gene variants and lipid profiles or body mass index in patients with diabetic and nondiabetic coronary heart disease.
- Author
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Kucukhuseyin O, Kurnaz O, Akadam-Teker AB, Isbir T, Bugra Z, Ozturk O, and Yilmaz-Aydogan H
- Subjects
- Adult, Aged, Coronary Disease complications, Coronary Disease epidemiology, Diabetes Complications epidemiology, Female, Genetic Association Studies, Genotype, Humans, Male, Middle Aged, Obesity, Risk Factors, Body Mass Index, Coronary Disease genetics, Diabetes Complications genetics, Lipids blood, Methylenetetrahydrofolate Reductase (NADPH2) genetics, Polymorphism, Single Nucleotide genetics
- Abstract
Background: The aim of this study is to investigate whether methylenetetrahydrofolate reductase (MTHFR) C677T mutation is associated with the development of hyperlipoproteinemia and obesity in coronary heart disease (CHD)., Methods: This study was carried out in 82 diabetic and 112 nondiabetic patients with CHD and in 138 CHD-free healthy controls. Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) and agarose gel electrophoresis techniques were used to determine the MTHFR C677T., Results: Distributions of MTHFR genotypes (C677T dbSNP: rs1801133) were similar in our study groups (P > 0.05). There was no statistical association between biochemical parameters and genotype distribution in nondiabetic CHD patients, while diabetic CC genotype carriers have elevated levels of body mass index (BMI) independently from lipid profiles (P = 0.002). In diabetic CHD patients, while evaluating the clinical parameters according to gender, it was found that gender had an impact on BMI (P = 0.013). Due to this gender effect, a multivariate analysis was conducted on the diabetic CHD patient group. The multivariate logistic regression analysis confirmed that the MTHFR-CC genotype was associated with elevated BMI levels in diabetic CHD patients (odds ratio [OR] = 5.42, P = 0.003)., Conclusion: The results of the present study demonstrated that possessing T allele of MTHFR C677T mutation indicates a protective association on BMI independently from other risk factors., (© 2013 Wiley Periodicals, Inc.)
- Published
- 2013
- Full Text
- View/download PDF
20. The effects of age and gender on the relationship between HMGCR promoter-911 SNP (rs33761740) and serum lipids in patients with coronary heart disease.
- Author
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Akadam-Teker B, Kurnaz O, Coskunpinar E, Daglar-Aday A, Kucukhuseyin O, Cakmak HA, Teker E, Bugra Z, Ozturk O, and Yilmaz-Aydogan H
- Subjects
- Adult, Age Distribution, Age Factors, Case-Control Studies, Cholesterol blood, Coronary Disease epidemiology, Female, Gene Frequency, Genetic Association Studies, Genetic Predisposition to Disease, Humans, Male, Middle Aged, Multivariate Analysis, Polymorphism, Single Nucleotide, Prevalence, Promoter Regions, Genetic, Sex Distribution, Sex Factors, Cholesterol, LDL blood, Coronary Disease blood, Coronary Disease genetics, Hydroxymethylglutaryl CoA Reductases genetics
- Abstract
Background: Hydroxymethylglutaryl-Coenzyme A Reductase (HMGCR) catalyzes the rate-limiting step of cholesterol biosynthesis. This enzyme is the target of the widely available cholesterol lowering statins. In this population-based case-control study, the frequencies of -911 C>A polymorphism (rs3761740) of the HMGCR gene in patients with coronary heart disease (CHD) and healthy subjects were investigated and the correlations between the different genotypes and hypercholesterolemia with cardiovascular risk factors were analyzed., Methods: The HMGCR genotypes were determined in 365 patients with CHD and 365 controls by PCR-RFLP assay. Anthropometric measurements were measured in all participants., Results: There was no significant difference in the genotype frequencies of the HMGCR polymorphism between the male subjects of both patient and control groups, however, the HMGCR-CC genotype was found to be more frequent in female patients with CHD than female controls (p=0.002). The HMGCR-CC genotype showed higher total-cholesterol (TC) and LDL-cholesterol (LDL-C) levels than the CA+AA genotypes in male CHD patients (p=0.018). Due to this significant sex interaction, a multivariate analysis was conducted on the patient group. In the multivariate logistic regression analysis, the HMGCR-CC genotype was significantly associated with age<55 (OR=2.837, p=0.001) and TC ≥ 5.18 mmol/L (OR=1.970, p=0.027) in male subjects. However, this association was not observed in female patients (p>0.05). This analysis confirmed that the HMGCR-CC genotype was associated with elevated TC levels in male CHD patients with age<55 years., Conclusion: These results suggest that age and sex modify the contribution of the HMGCR-911 polymorphism to fasting serum TC, LDL-C levels and risk of CHD., (© 2013.)
- Published
- 2013
- Full Text
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21. Different effects of PPARA, PPARG and ApoE SNPs on serum lipids in patients with coronary heart disease based on the presence of diabetes.
- Author
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Yilmaz-Aydogan H, Kurnaz O, Kucukhuseyin O, Akadam-Teker B, Kurt O, Eronat AP, Tekeli A, Bugra Z, and Ozturk O
- Subjects
- Adult, Aged, Alleles, Apolipoprotein E4 metabolism, Case-Control Studies, Cholesterol blood, Coronary Disease blood, Coronary Disease pathology, Diabetes Mellitus, Type 2 blood, Diabetes Mellitus, Type 2 genetics, Female, Gene Frequency, Genetic Association Studies, Genetic Predisposition to Disease, Humans, Hypercholesterolemia blood, Hypercholesterolemia genetics, Hypercholesterolemia pathology, Male, Middle Aged, Polymerase Chain Reaction, Polymorphism, Restriction Fragment Length, Risk Factors, Turkey, Apolipoprotein E4 genetics, Coronary Disease genetics, Diabetes Mellitus, Type 2 pathology, PPAR alpha genetics, PPAR gamma genetics, Polymorphism, Single Nucleotide
- Abstract
Background: The aim of this study was to investigate the individual or combined effects of PPARA-L162V, PPARG-C161T and APOE polymorphisms on hyperlipidemia in coronary heart disease (CHD) patients., Methods: Our study included 223 patients with CHD (103 with type 2 diabetes (T2DM), 120 without diabetes) and 101 controls. All genotypes were determined by PCR-RFLP technique., Results: Genotypic and allelic distributions of PPARA-L162V polymorphism were similar between study and control groups (p>0.05). The serum total-cholesterol (TC) and LDL-cholesterol (LDL-C) levels were higher in PPARA-V162 allele carriers in non-diabetic CHD patients (p=0.007 and p=0.038, respectively). The increasing effect of the PPARA-V162 allele on serum TC and LDL-C levels was weakened with the presence of PPARG-161T allele in the non-diabetic CHD patients. The ApoE4-PPARA-V162 allelic combination of the ApoE/PPARA genes was found to be more frequent in diabetic CHD patients independent of serum lipids (p=0.035)., Conclusions: The PPARA V162 allele has an increasing effect on TC and LDL-C levels and this effect was reduced by carrying PPARG T161 allele in non-diabetic CHD patients. On the other hand, the V162 allele may be associated with an increased risk of CHD in diabetic CHD patients due to the presence of ApoE4 allele independent of serum lipids. We suggest that the PPARA L162V polymorphism may have diverse effects on serum lipids and CHD risk depends on the presence of T2DM., (Copyright © 2013 Elsevier B.V. All rights reserved.)
- Published
- 2013
- Full Text
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22. Associations of -374T/A polymorphism of receptor for advanced glycation end products (RAGE) gene in Turkish diabetic and non-diabetic patients with coronary artery disease.
- Author
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Kucukhuseyin O, Aydogan HY, Isbir CS, and Isbir T
- Subjects
- Comorbidity, Coronary Artery Disease diagnosis, Coronary Artery Disease epidemiology, Diabetes Mellitus diagnosis, Diabetes Mellitus epidemiology, Female, Genotype, Humans, Male, Middle Aged, Polymorphism, Restriction Fragment Length, Receptor for Advanced Glycation End Products metabolism, Turkey epidemiology, Coronary Artery Disease genetics, Diabetes Mellitus genetics, Genetic Predisposition to Disease, Polymorphism, Single Nucleotide, Receptor for Advanced Glycation End Products genetics
- Abstract
Background: In this study we aimed to determine the possible risks for the development of coronary artery disease (CAD) in diabetic (DM(+)) and non-diabetic (DM(-)) patients according to the -374T/A polymorphism of the receptor for advanced glycation end products (RAGE) gene which affects the function of RAGE itself., Materials and Methods: This study was carried out in 52 non-diabetic and 62 diabetic patients with CAD, and 55 CAD-free, healthy volunteers as controls. The A-T transversion polymorphism at position -374 in the promotor region of the RAGE gene was analyzed by polymerase chain reaction (PCR)-restriction fragment length polymorphism (RFLP) techniques., Results: The -374T/A AA genotype frequency was statistically higher in the whole patient group when compared with the control group (p=0.034), and statistically higher in the DM(+) group when compared with the control group (p=0.003). Homozygosity for the -374A allele was found to be higher, but not statistically meaningful, in DM(-) patients (17.3%) when compared with the control group (13.2%). In this study, in contrast with other studies, we found possesion of the A allele to be an independent risk factor in CAD in patients with diabetes mellitus., Conclusion: Possesion of the -374A allele may contribute to the CAD in diabetic patients with triggering macrophages by increased levels of AGEs.
- Published
- 2009
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