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09 december 2022, Item does not contain fulltext

08 december 2022, Contains fulltext : 285541.pdf (Publisher’s version ) (Open Access)

Residential buildings are responsible for a considerable share of energy consumption and carbon emission. To decarbonize by 2050, as agreed in the Paris Climate Accord, immediate action for lowering the environmental impact of the building sector is needed. Environmental building design is a promising path, particularly during the early-stage design when design decisions are more impactful and long-lasting. One of the initial steps in the building design process is site assessment, during which the building context and environmental factors are to be evaluated. The surrounding environment plays a critical role in the building's energy performance and the thermal, visual, and acoustic comfort of its occupants. We choose quantitative approaches to study the complexity of the environmental design with respect to the building context by analyzing environmental cues embedded in architectural drawings that have been given less attention in previous studies. Nevertheless, disclosing site-specific geolocation data of buildings, more specifically residential type, is often challenging due to privacy issues. Therefore, there is a lack of context-related metadata in the current architectural datasets. Whereas simulation data are more available and provide a wealth of contextual information, however, it is less appealing for architects to interpret design patterns from extensive simulation figures. This research focuses on developing an interpretable visualization of the building’s micro-climate context from environmental simulation data without direct access to the geolocation of the site. The environmental context visualization is created from daylight, view, and noise from 3088 multifamily housing presented in the Swiss Buildings data set, merely based on available simulation data. The presented pipeline in this study facilitates the employment of existing simulation data in the built environment datasets while circumventing the concerns associated with geolocation data e, Green Open Access added to TU Delft Institutional Repository 'You share, we take care!' - Taverne project https://www.openaccess.nl/en/you-share-we-take-care Otherwise as indicated in the copyright section: the publisher is the copyright holder of this work and the author uses the Dutch legislation to make this work public., History, Form & Aesthetics

Information on the history of architecture is embedded in our daily surroundings, in vernacular and heritage buildings and in physical objects, photographs and plans. Historians study these tangible and intangible artefacts and the communities that built and used them. Thus valuable insights are gained into the past and the present as they also provide a foundation for designing the future. Given that our understanding of the past is limited by the inadequate availability of data, the article demonstrates that advanced computer tools can help gain more and well-linked data from the past. Computer vision can make a decisive contribution to the identification of image content in historical photographs. This application is particularly interesting for architectural history, where visual sources play an essential role in understanding the built environment of the past, yet lack of reliable metadata often hinders the use of materials. The automated recognition contributes to making a variety of image sources usable for research., Building Knowledge, Pattern Recognition and Bioinformatics, History, Form & Aesthetics

We propose a simple yet effective metric that measures structural similarity between visual instances of architectural floor plans, without the need for learning. Qualitatively, our experiments show that the retrieval results are similar to deeply learned methods. Effectively comparing instances of floor plan data is paramount to the success of machine understanding of floor plan data, including the assessment of floor plan generative models and floor plan recommendation systems. Comparing visual floor plan images goes beyond a sole pixel-wise visual examination and is crucially about similarities and differences in the shapes and relations between subdivisions that compose the layout. Currently, deep metric learning approaches are used to learn a pair-wise vector representation space that closely mimics the structural similarity, in which the models are trained on similarity labels that are obtained by Intersection-over-Union (IoU). To compensate for the lack of structural awareness in IoU, graph-based approaches such as Graph Matching Networks (GMNs) are used, which require pairwise inference for comparing data instances, making GMNs less practical for retrieval applications. In this paper, an effective evaluation metric for judging the structural similarity of floor plans, coined SSIG (Structural Similarity by IoU and GED), is proposed based on both image and graph distances. In addition, an efficient algorithm is developed that uses SSIG to rank a large-scale floor plan database. Code will be openly available., The version of this article that was uploaded to the research portal is an open access version of the IEEE Computer Society version that was uploaded in December 2023. There is a slight discrepancy between the page numbers of the definitive version (pp. 1565-1574) and the open access version (pp. 1573-1582)., Building Knowledge, Pattern Recognition and Bioinformatics

08 december 2022, Contains fulltext : 285541.pdf (Publisher’s version ) (Open Access)

We introduce AmsterTime: a challenging dataset to benchmark visual place recognition (VPR) in presence of a severe domain shift. AmsterTime offers a collection of 2,500 well-curated images matching the same scene from a street view matched to historical archival image data from Amsterdam city. The image pairs capture the same place with different cameras, viewpoints, and appearances. Unlike existing benchmark datasets, AmsterTime is directly crowdsourced in a GIS navigation platform (Mapillary). We evaluate various baselines, including non-learning, supervised and self-supervised methods, pre-trained on different relevant datasets, for both verification and retrieval tasks. Our result credits the best accuracy to the ResNet-101 model pre-trained on the Landmarks dataset for both verification and retrieval tasks by 84% and 24%, respectively. Additionally, a subset of Amsterdam landmarks is collected for feature evaluation in a classification task. Classification labels are further used to extract the visual explanations using Grad-CAM for inspection of the learned similar visuals in a deep metric learning models., Green Open Access added to TU Delft Institutional Repository ‘You share, we take care!’ – Taverne project https://www.openaccess.nl/en/you-share-we-take-care Otherwise as indicated in the copyright section: the publisher is the copyright holder of this work and the author uses the Dutch legislation to make this work public., Pattern Recognition and Bioinformatics, History, Form & Aesthetics

While half of all construction tasks can be fully automated the other half relies to a certain degree on human support. This paper presents a Computer Vision (CV) and Human–Robot Interaction/Collaboration (HRI/C) supported Design-to-Robotic-Assembly (D2RA) approach that links computational design with robotic assembly. This multidisciplinary approach has been tested on a case study focusing on urban furniture and involving experts from respective disciplines and students., Green Open Access added to TU Delft Institutional Repository 'You share, we take care!' - Taverne project https://www.openaccess.nl/en/you-share-we-take-care Otherwise as indicated in the copyright section: the publisher is the copyright holder of this work and the author uses the Dutch legislation to make this work public., History, Form & Aesthetics, Human-Robot Interaction

While three-dimensional (3D) building models play an increasingly pivotal role in many real-world applications, obtaining a compact representation of buildings remains an open problem. In this paper, we present a novel framework for reconstructing compact, watertight, polygonal building models from point clouds. Our framework comprises three components: (a) a cell complex is generated via adaptive space partitioning that provides a polyhedral embedding as the candidate set; (b) an implicit field is learned by a deep neural network that facilitates building occupancy estimation; (c) a Markov random field is formulated to extract the outer surface of a building via combinatorial optimization. We evaluate and compare our method with state-of-the-art methods in generic reconstruction, model-based reconstruction, geometry simplification, and primitive assembly. Experiments on both synthetic and real-world point clouds have demonstrated that, with our neural-guided strategy, high-quality building models can be obtained with significant advantages in fidelity, compactness, and computational efficiency. Our method also shows robustness to noise and insufficient measurements, and it can directly generalize from synthetic scans to real-world measurements. The source code of this work is freely available at https://github.com/chenzhaiyu/points2poly., Urban Data Science, History, Form & Aesthetics

This paper investigates sensitive minima in popular deep distance learning techniques such as Siamese and Triplet networks. We demonstrate that standard formulations may find solutions that are sensitive to small changes and thus do not generalize well. To alleviate sensitive minima we propose a new approach to regularize margin-based deep distance learning by introducing stochasticity in the loss that encourages robust solutions. Our experimental results on HPatches show promise compared to common regularization techniques including weight decay and dropout, especially for small sample sizes., Pattern Recognition and Bioinformatics

The ArchiMediaL project aims to bridge between data science and researches on contemporary and historical built environments by developing state of the art AI algorithms for the automatic linking of available meta-data and image repositories. As a case-study we use the 360,000+ historical images from the Amsterdam Beeldbank database., History & Complexity, Pattern Recognition and Bioinformatics

Cross domain image matching between image collections from different source and target domains is challenging in times of deep learning due to i) limited variation of image conditions in a training set, ii) lack of paired-image labels during training, iii) the existing of outliers that makes image matching domains not fully overlap. To this end, we propose an end-to-end architecture that can match cross domain images without labels in the target domain and handle non-overlapping domains by outlier detection. We leverage domain adaptation and triplet constraints for training a network capable of learning domain invariant and identity distinguishable representations, and iteratively detecting the outliers with an entropy loss and our proposed weighted MK-MMD. Extensive experimental evidence on Office [17] dataset and our proposed datasets Shape, Pitts-CycleGAN shows that the proposed approach yields state-of-the-art cross domain image matching and outlier detection performance on different benchmarks. The code will be made publicly available., Pattern Recognition and Bioinformatics

Understanding how cities visually differ from each others is interesting for planners, residents, and historians. We investigate the interpretation of deep features learned by convolutional neural networks (CNNs) for city recognition. Given a trained city recognition network, we first generate weighted masks using the known Grad-CAM technique and to select the most discriminate regions in the image. Since the image classification label is the city name, it contains no information of objects that are class-discriminate, we investigate the interpretability of deep representations with two methods. (i) Unsupervised method is used to cluster the objects appearing in the visual explanations. (ii) A pretrained semantic segmentation model is used to label objects in pixel level, and then we introduce statistical measures to quantitatively evaluate the interpretability of discriminate objects. The influence of network architectures and random initializations in training, is studied on the interpretability of CNN features for city recognition. The results suggest that network architectures would affect the interpretability of learned visual representations greater than different initializations., Pattern Recognition and Bioinformatics

Built form dominates the urban space where most people live and work and provides a visual reflection of the local, regional and global esthetical, social, cultural, technological and economic factors and values. Street-view images and historical photo archives are therefore an invaluable source for sociological or historical study; however, they often lack metadata to start any comparative analysis. Date and location are two basic annotations often missing from historical images. Depending on the research question other annotations might be useful, that either could be visually derived (e.g. the number or age of cars, the fashion people wear, the amount of street decay) or extracted from other data sources (e.g. crime statistics for the neighborhood where the picture was taken). Recent advances in automatic visual analysis and the increasing amount of linked open data triggered the research described in this paper. We provide an overview of the current status of automated image analysis and linked data technology and present a case study and methodology to automatically enrich a large database of historical images of buildings in the city of Amsterdam., Green Open Access added to TU Delft Institutional Repository ‘You share, we take care!’ – Taverne project https://www.openaccess.nl/en/you-share-we-take-care Otherwise as indicated in the copyright section: the publisher is the copyright holder of this work and the author uses the Dutch legislation to make this work public., History & Complexity, Pattern Recognition and Bioinformatics

Bacterial pathogens evolve during the course of infection as they adapt to the selective pressures that confront them inside the host. Identification of adaptive mutations and their contributions to pathogen fitness remains a central challenge. Although mutations can either target intergenic or coding regions in the pathogen genome, studies of host adaptation have focused predominantly on molecular evolution within coding regions, whereas the role of intergenic mutations remains unclear. Here, we address this issue and investigate the extent to which intergenic mutations contribute to the evolutionary response of a clinically important bacterial pathogen, Pseudomonas aeruginosa, to the host environment, and whether intergenic mutations have distinct roles in host adaptation. We characterize intergenic evolution in 44 clonal lineages of P. aeruginosa and identify 77 intergenic regions in which parallel evolution occurs. At the genetic level, we find that mutations in regions under selection are located primarily within regulatory elements upstream of transcriptional start sites. At the functional level, we show that some of these mutations both increase or decrease transcription of genes and are directly responsible for evolution of important pathogenic phenotypes including antibiotic sensitivity. Importantly, we find that intergenic mutations facilitate essential genes to become targets of evolution. In summary, our results highlight the evolutionary significance of intergenic mutations in creating host-adapted strains, and that intergenic and coding regions have different qualitative contributions to this process.

We address the interpretability of convolutional neural networks (CNNs) for predicting a geo-location from an image. In a pilot experiment we classify images of Pittsburgh vs Tokyo and visualize the learned CNN filters. We found that varying the CNN architecture leads to variating in the visualized filters. This calls for further investigation of the effective parameters on the interpretability of CNNs., Green Open Access added to TU Delft Institutional Repository ‘You share, we take care!’ – Taverne project https://www.openaccess.nl/en/you-share-we-take-care Otherwise as indicated in the copyright section: the publisher is the copyright holder of this work and the author uses the Dutch legislation to make this work public., Pattern Recognition and Bioinformatics, History & Complexity

The advent of the digital era has revolutionized many aspect of our society and has significantly improved the quality of our lives. Consequently, signal processing has gained a considerable attention as the science behind the digital life. Among different applications for signal processing theory and algorithms, wireless communications remains one of the attractive and popular ones due to the widespread use of mobile devices. This thesis is dedicated to develop signal processing algorithms to design highspeed wireless transceivers that can perform in highly reflective and harsh environments. The start of this research work initiated as a collaboration between TU Delft and an industrial partner, on a research aimed at short range gigabit wireless link within a lithography machine. The underlying unique wireless environment, together with the challenging specifications of the communication link for mechatronic systems, made this a compelling research project., Circuits and Systems

The processing required for the global maximization of the intelligibility of speech acquired by multiple microphones and rendered by a single loudspeaker, is considered in this paper. The intelligibility is quantized, based on the mutual information rate between the message spoken by the talker and the message as interpreted by the listener. We prove that then, in each of a set of narrow-band channels, the processing can be decomposed into a minimum variance distortionless response (MVDR) beamforming operation that reduces the noise in the talker environment, followed by a gain operation that, given the far-end noise and beamforming operation, accounts for the noise at the listener end. Our experiments confirm that both processing steps are necessary for the effective conveyance ofa message and, importantly, that the second step must be aware of the first step., Accepted Author Manuscript, Circuits and Systems

The effect of polymicrobial interactions on pathogen physiology and how it can act either to limit pathogen colonization or to potentiate pathogen expansion and virulence are not well understood. Pseudomonas aeruginosa and Staphylococcus aureus are opportunistic pathogens commonly found together in polymicrobial human infections. However, we have previously shown that the interactions between these two bacterial species are strain dependent. Whereas P. aeruginosa PAO1, a commonly used laboratory strain, effectively suppressed S. aureus growth, we observed a commensal-like interaction between the human host-adapted strain, DK2-P2M24-2003, and S. aureus. In this study, characterization by matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) imaging mass spectrometry (IMS) and mass spectral (MS) molecular networking revealed a significant metabolic divergence between P. aeruginosa PAO1 and DK2-P2M24-2003, which comprised several virulence factors and signaling 4-hydroxy-2-alkylquinoline (HAQ) molecules. Strikingly, a further modulation of the HAQ profile was observed in DK2-P2M24-2003 during interaction with S. aureus, resulting in an area with thickened colony morphology at the P. aeruginosa-S. aureus interface. In addition, we found an HAQ-mediated protection of S. aureus by DK2-P2M24-2003 from the killing effect of tobramycin. Our findings suggest a model where the metabolic divergence manifested in human host-adapted P. aeruginosa is further modulated during interaction with S. aureus and facilitate a proto-cooperative P. aeruginosa-S. aureus relationship., The effect of polymicrobial interactions on pathogen physiology and how it can act either to limit pathogen colonization or to potentiate pathogen expansion and virulence are not well understood. Pseudomonas aeruginosa and Staphylococcus aureus are opportunistic pathogens commonly found together in polymicrobial human infections. However, we have previously shown that the interactions between these two bacterial species are strain dependent. Whereas P. aeruginosa PAO1, a commonly used laboratory strain, effectively suppressed S. aureus growth, we observed a commensal-like interaction between the human host-adapted strain, DK2-P2M24-2003, and S. aureus. In this study, characterization by matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) imaging mass spectrometry (IMS) and mass spectral (MS) molecular networking revealed a significant metabolic divergence between P. aeruginosa PAO1 and DK2-P2M24-2003, which comprised several virulence factors and signaling 4-hydroxy-2-alkylquinoline (HAQ) molecules. Strikingly, a further modulation of the HAQ profile was observed in DK2-P2M24-2003 during interaction with S. aureus, resulting in an area with thickened colony morphology at the P. aeruginosa-S. aureus interface. In addition, we found an HAQ-mediated protection of S. aureus by DK2-P2M24-2003 from the killing effect of tobramycin. Our findings suggest a model where the metabolic divergence manifested in human host-adapted P. aeruginosa is further modulated during interaction with S. aureus and facilitate a proto-cooperative P. aeruginosa-S. aureus relationship.