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1. Global fine-resolution data on springtail abundance and community structure

Author

Potapov, A. M., Chen, T. -W., Striuchkova, A. V., Alatalo, J. M., Alexandre, D., Arbea, J., Ashton, T., Ashwood, F., Babenko, A. B., Bandyopadhyaya, I., Baretta, C. R. D. M., Baretta, D., Barnes, A. D., Bellini, B. C., Bendjaballah, M., Berg, M. P., Bernava, V., Bokhorst, S., Bokova, A. I., Bolger, T., Bouchard, M., Brito, R. A., Buchori, D., Castano-Meneses, G., Chauvat, M., Chomel, M., Chow, Y., Chown, S. L., Classen, A. T., Cortet, J., Cuchta, P., de la Pedrosa, A. M., De Lima, E. C. A., Deharveng, L. E., Doblas Miranda, E., Drescher, J., Eisenhauer, N., Ellers, J., Ferlian, O., Ferreira, S. S. D., Ferreira, A. S., Fiera, C., Filser, J., Franken, O., Fujii, S., Koudji, E. G., Gao, M., Gendreau-Berthiaume, B., Gers, C., Greve, M., Hamra-Kroua, S., Handa, I. T., Hasegawa, M., Heiniger, C., Hishi, T., Holmstrup, M., Homet, P., Hoye, T. T., Ivask, M., Jacques, B., Janion-Scheepers, C., Jochum, M., Joimel, S., Jorge, B. C. S., Jucevica, E., Kapinga, E. M., Kovac, L., Krab, E. J., Krogh, P. H., Kuu, A., Kuznetsova, N., Lam, W. N., Lin, D., Lindo, Z., Liu, A. W. P., Lu, J. -Z., Lucianez, M. J., Marx, M. T., Mawan, A., Mccary, M. A., Minor, M. A., Mitchell, G. I., Moreno, D., Nakamori, T., Negri, Ilaria, Nielsen, U. N., Ochoa-Hueso, R., Oliveira Filho, L. C. I., Palacios-Vargas, J. G., Pollierer, M. M., Ponge, J. -F., Potapov, M. B., Querner, P., Rai, B., Raschmanova, N., Rashid, M. I., Raymond-Leonard, L. J., Reis, A. S., Ross, G. M., Rousseau, L., Russell, D. J., Saifutdinov, R. A., Salmon, S., Santonja, M., Saraeva, A. K., Sayer, E. J., Scheunemann, N., Scholz, C., Seeber, J., Shaw, P., Shveenkova, Y. B., Slade, E. M., Stebaeva, S., Sterzynska, M., Sun, X., Susanti, W. I., Taskaeva, A. A., Tay, L. S., Thakur, M. P., Treasure, A. M., Tsiafouli, M., Twala, M. N., Uvarov, A. V., Venier, L. A., Widenfalk, L. A., Widyastuti, R., Winck, B., Winkler, D., Wu, D., Xie, Z., Yin, R., Zampaulo, R. A., Zeppelini, D., Zhang, B., Zoughailech, A., Ashford, O., Klauberg-Filho, O., Scheu, S., Negri I. (ORCID:0000-0001-5188-1408), Potapov, A. M., Chen, T. -W., Striuchkova, A. V., Alatalo, J. M., Alexandre, D., Arbea, J., Ashton, T., Ashwood, F., Babenko, A. B., Bandyopadhyaya, I., Baretta, C. R. D. M., Baretta, D., Barnes, A. D., Bellini, B. C., Bendjaballah, M., Berg, M. P., Bernava, V., Bokhorst, S., Bokova, A. I., Bolger, T., Bouchard, M., Brito, R. A., Buchori, D., Castano-Meneses, G., Chauvat, M., Chomel, M., Chow, Y., Chown, S. L., Classen, A. T., Cortet, J., Cuchta, P., de la Pedrosa, A. M., De Lima, E. C. A., Deharveng, L. E., Doblas Miranda, E., Drescher, J., Eisenhauer, N., Ellers, J., Ferlian, O., Ferreira, S. S. D., Ferreira, A. S., Fiera, C., Filser, J., Franken, O., Fujii, S., Koudji, E. G., Gao, M., Gendreau-Berthiaume, B., Gers, C., Greve, M., Hamra-Kroua, S., Handa, I. T., Hasegawa, M., Heiniger, C., Hishi, T., Holmstrup, M., Homet, P., Hoye, T. T., Ivask, M., Jacques, B., Janion-Scheepers, C., Jochum, M., Joimel, S., Jorge, B. C. S., Jucevica, E., Kapinga, E. M., Kovac, L., Krab, E. J., Krogh, P. H., Kuu, A., Kuznetsova, N., Lam, W. N., Lin, D., Lindo, Z., Liu, A. W. P., Lu, J. -Z., Lucianez, M. J., Marx, M. T., Mawan, A., Mccary, M. A., Minor, M. A., Mitchell, G. I., Moreno, D., Nakamori, T., Negri, Ilaria, Nielsen, U. N., Ochoa-Hueso, R., Oliveira Filho, L. C. I., Palacios-Vargas, J. G., Pollierer, M. M., Ponge, J. -F., Potapov, M. B., Querner, P., Rai, B., Raschmanova, N., Rashid, M. I., Raymond-Leonard, L. J., Reis, A. S., Ross, G. M., Rousseau, L., Russell, D. J., Saifutdinov, R. A., Salmon, S., Santonja, M., Saraeva, A. K., Sayer, E. J., Scheunemann, N., Scholz, C., Seeber, J., Shaw, P., Shveenkova, Y. B., Slade, E. M., Stebaeva, S., Sterzynska, M., Sun, X., Susanti, W. I., Taskaeva, A. A., Tay, L. S., Thakur, M. P., Treasure, A. M., Tsiafouli, M., Twala, M. N., Uvarov, A. V., Venier, L. A., Widenfalk, L. A., Widyastuti, R., Winck, B., Winkler, D., Wu, D., Xie, Z., Yin, R., Zampaulo, R. A., Zeppelini, D., Zhang, B., Zoughailech, A., Ashford, O., Klauberg-Filho, O., Scheu, S., and Negri I. (ORCID:0000-0001-5188-1408)

Abstract

Springtails (Collembola) inhabit soils from the Arctic to the Antarctic and comprise an estimated ~32% of all terrestrial arthropods on Earth. Here, we present a global, spatially-explicit database on springtail communities that includes 249,912 occurrences from 44,999 samples and 2,990 sites. These data are mainly raw sample-level records at the species level collected predominantly from private archives of the authors that were quality-controlled and taxonomically-standardised. Despite covering all continents, most of the sample-level data come from the European continent (82.5% of all samples) and represent four habitats: woodlands (57.4%), grasslands (14.0%), agrosystems (13.7%) and scrublands (9.0%). We included sampling by soil layers, and across seasons and years, representing temporal and spatial within-site variation in springtail communities. We also provided data use and sharing guidelines and R code to facilitate the use of the database by other researchers. This data paper describes a static version of the database at the publication date, but the database will be further expanded to include underrepresented regions and linked with trait data.

Published
2024

2. Globally invariant metabolism but density-diversity mismatch in springtails

Author

Potapov, A. M., Guerra, C. A., van den Hoogen, J., Babenko, A., Bellini, B. C., Berg, M. P., Chown, S. L., Deharveng, L., Kováč, Ľ., Kuznetsova, N. A., Ponge, J. F., Potapov, M. B., Russell, D. J., Alexandre, D., Alatalo, J. M., Arbea, J. I., Bandyopadhyaya, I., Bernava, V., Bokhorst, S., Bolger, T., Castaño-Meneses, G., Chauvat, M., Chen, T. W., Chomel, M., Classen, A. T., Cortet, J., Čuchta, P., Manuela de la Pedrosa, A., Ferreira, S. S. D., Fiera, C., Filser, J., Franken, O., Fujii, S., Koudji, E. G., Gao, M., Gendreau-Berthiaume, B., Gomez-Pamies, D. F., Greve, M., Tanya Handa, I., Heiniger, C., Holmstrup, M., Homet, P., Ivask, M., Janion-Scheepers, C., Jochum, M., Joimel, S., Claudia, S. Jorge B., Jucevica, E., Ferlian, O., Iuñes de Oliveira Filho, L. C., Klauberg-Filho, O., Baretta, D., Krab, E. J., Kuu, A., de Lima, E. C. A., Lin, D., Lindo, Z., Liu, A., Lu, J. Z., Luciañez, M. J., Marx, M. T., Mccary, M. A., Minor, M. A., Nakamori, T., Negri, Ilaria, Ochoa-Hueso, R., Palacios-Vargas, J. G., Pollierer, M. M., Querner, P., Raschmanová, N., Rashid, M. I., Raymond-Léonard, L. J., Rousseau, L., Saifutdinov, R. A., Salmon, S., Sayer, E. J., Scheunemann, N., Scholz, C., Seeber, J., Shveenkova, Y. B., Stebaeva, S. K., Sterzynska, M., Sun, X., Susanti, W. I., Taskaeva, A. A., Thakur, M. P., Tsiafouli, M. A., Turnbull, M. S., Twala, M. N., Uvarov, A. V., Venier, L. A., Widenfalk, L. A., Winck, B. R., Winkler, D., Wu, D., Xie, Z., Yin, R., Zeppelini, D., Crowther, T. W., Eisenhauer, N., Negri I. (ORCID:0000-0001-5188-1408), Potapov, A. M., Guerra, C. A., van den Hoogen, J., Babenko, A., Bellini, B. C., Berg, M. P., Chown, S. L., Deharveng, L., Kováč, Ľ., Kuznetsova, N. A., Ponge, J. F., Potapov, M. B., Russell, D. J., Alexandre, D., Alatalo, J. M., Arbea, J. I., Bandyopadhyaya, I., Bernava, V., Bokhorst, S., Bolger, T., Castaño-Meneses, G., Chauvat, M., Chen, T. W., Chomel, M., Classen, A. T., Cortet, J., Čuchta, P., Manuela de la Pedrosa, A., Ferreira, S. S. D., Fiera, C., Filser, J., Franken, O., Fujii, S., Koudji, E. G., Gao, M., Gendreau-Berthiaume, B., Gomez-Pamies, D. F., Greve, M., Tanya Handa, I., Heiniger, C., Holmstrup, M., Homet, P., Ivask, M., Janion-Scheepers, C., Jochum, M., Joimel, S., Claudia, S. Jorge B., Jucevica, E., Ferlian, O., Iuñes de Oliveira Filho, L. C., Klauberg-Filho, O., Baretta, D., Krab, E. J., Kuu, A., de Lima, E. C. A., Lin, D., Lindo, Z., Liu, A., Lu, J. Z., Luciañez, M. J., Marx, M. T., Mccary, M. A., Minor, M. A., Nakamori, T., Negri, Ilaria, Ochoa-Hueso, R., Palacios-Vargas, J. G., Pollierer, M. M., Querner, P., Raschmanová, N., Rashid, M. I., Raymond-Léonard, L. J., Rousseau, L., Saifutdinov, R. A., Salmon, S., Sayer, E. J., Scheunemann, N., Scholz, C., Seeber, J., Shveenkova, Y. B., Stebaeva, S. K., Sterzynska, M., Sun, X., Susanti, W. I., Taskaeva, A. A., Thakur, M. P., Tsiafouli, M. A., Turnbull, M. S., Twala, M. N., Uvarov, A. V., Venier, L. A., Widenfalk, L. A., Winck, B. R., Winkler, D., Wu, D., Xie, Z., Yin, R., Zeppelini, D., Crowther, T. W., Eisenhauer, N., and Negri I. (ORCID:0000-0001-5188-1408)

Abstract

Soil life supports the functioning and biodiversity of terrestrial ecosystems. Springtails (Collembola) are among the most abundant soil arthropods regulating soil fertility and flow of energy through above- and belowground food webs. However, the global distribution of springtail diversity and density, and how these relate to energy fluxes remains unknown. Here, using a global dataset representing 2470 sites, we estimate the total soil springtail biomass at 27.5 megatons carbon, which is threefold higher than wild terrestrial vertebrates, and record peak densities up to 2 million individuals per square meter in the tundra. Despite a 20-fold biomass difference between the tundra and the tropics, springtail energy use (community metabolism) remains similar across the latitudinal gradient, owing to the changes in temperature with latitude. Neither springtail density nor community metabolism is predicted by local species richness, which is high in the tropics, but comparably high in some temperate forests and even tundra. Changes in springtail activity may emerge from latitudinal gradients in temperature, predation and resource limitation in soil communities. Contrasting relationships of biomass, diversity and activity of springtail communities with temperature suggest that climate warming will alter fundamental soil biodiversity metrics in different directions, potentially restructuring terrestrial food webs and affecting soil functioning.

Published
2023

4. Functional and Taxonomic Diversity of Collembola as Complementary Tools to Assess Land Use Effects on Soils Biodiversity

Author

Joimel S., Schwartz C., Bonfanti J., Hedde M., Krogh P. H., Peres G., Pernin C., Rakoto A., Salmon S., Santorufo L., Cortet J., Joimel, S., Schwartz, C., Bonfanti, J., Hedde, M., Krogh, P. H., Peres, G., Pernin, C., Rakoto, A., Salmon, S., Santorufo, L., and Cortet, J.

Subjects
agricultural land use, soil survey, urban homogenization, urban land use, functional trait
Abstract

Collembola have been proposed for several decades as a good model organisms to survey soil biodiversity; but most of the studies focused on taxonomic endpoints. The main objectives of this study are to compare the effects of the different land uses, including urban and industrial land uses, while using both collembolan functional and taxonomic biodiversity approaches. We collected data on 3,056 samples of Collembola communities across 758 sites in various land uses throughout France. The types of land use considered included all types of human activity from forestry to urban, industrial, traffic, mining and military areas, agricultural grassland, arable land, vineyards and urban vegetable gardens. In order to study functional and taxonomic biodiversity, we used community-weighted means, functional indices, species richness and density. When looking at collembolan functional diversity, urban and industrial soils appear clearly less diversified than when considering the taxonomic diversity. We suspect here a functional homogenization effect commonly reported in the literature for various organisms in urban ecosystems. Our study provides range of values for different taxonomic and functional indices of Collembola communities in a wide land use classification across France.

Published
2021

5. Global fine-resolution data on springtail abundance and community structure.

Author

Potapov AM, Chen TW, Striuchkova AV, Alatalo JM, Alexandre D, Arbea J, Ashton T, Ashwood F, Babenko AB, Bandyopadhyaya I, Baretta CRDM, Baretta D, Barnes AD, Bellini BC, Bendjaballah M, Berg MP, Bernava V, Bokhorst S, Bokova AI, Bolger T, Bouchard M, Brito RA, Buchori D, Castaño-Meneses G, Chauvat M, Chomel M, Chow Y, Chown SL, Classen AT, Cortet J, Čuchta P, de la Pedrosa AM, De Lima ECA, Deharveng LE, Doblas Miranda E, Drescher J, Eisenhauer N, Ellers J, Ferlian O, Ferreira SSD, Ferreira AS, Fiera C, Filser J, Franken O, Fujii S, Koudji EG, Gao M, Gendreau-Berthiaume B, Gers C, Greve M, Hamra-Kroua S, Handa IT, Hasegawa M, Heiniger C, Hishi T, Holmstrup M, Homet P, Høye TT, Ivask M, Jacques B, Janion-Scheepers C, Jochum M, Joimel S, Jorge BCS, Juceviča E, Kapinga EM, Kováč Ľ, Krab EJ, Krogh PH, Kuu A, Kuznetsova N, Lam WN, Lin D, Lindo Z, Liu AWP, Lu JZ, Luciáñez MJ, Marx MT, Mawan A, McCary MA, Minor MA, Mitchell GI, Moreno D, Nakamori T, Negri I, Nielsen UN, Ochoa-Hueso R, Oliveira Filho LCI, Palacios-Vargas JG, Pollierer MM, Ponge JF, Potapov MB, Querner P, Rai B, Raschmanová N, Rashid MI, Raymond-Léonard LJ, Reis AS, Ross GM, Rousseau L, Russell DJ, Saifutdinov RA, Salmon S, Santonja M, Saraeva AK, Sayer EJ, Scheunemann N, Scholz C, Seeber J, Shaw P, Shveenkova YB, Slade EM, Stebaeva S, Sterzynska M, Sun X, Susanti WI, Taskaeva AA, Tay LS, Thakur MP, Treasure AM, Tsiafouli M, Twala MN, Uvarov AV, Venier LA, Widenfalk LA, Widyastuti R, Winck B, Winkler D, Wu D, Xie Z, Yin R, Zampaulo RA, Zeppelini D, Zhang B, Zoughailech A, Ashford O, Klauberg-Filho O, and Scheu S

Subjects
Animals, Ecosystem, Forests, Seasons, Soil, Arthropods
Abstract

Springtails (Collembola) inhabit soils from the Arctic to the Antarctic and comprise an estimated ~32% of all terrestrial arthropods on Earth. Here, we present a global, spatially-explicit database on springtail communities that includes 249,912 occurrences from 44,999 samples and 2,990 sites. These data are mainly raw sample-level records at the species level collected predominantly from private archives of the authors that were quality-controlled and taxonomically-standardised. Despite covering all continents, most of the sample-level data come from the European continent (82.5% of all samples) and represent four habitats: woodlands (57.4%), grasslands (14.0%), agrosystems (13.7%) and scrublands (9.0%). We included sampling by soil layers, and across seasons and years, representing temporal and spatial within-site variation in springtail communities. We also provided data use and sharing guidelines and R code to facilitate the use of the database by other researchers. This data paper describes a static version of the database at the publication date, but the database will be further expanded to include underrepresented regions and linked with trait data., (© 2024. The Author(s).)

Published
2024
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6. Globally invariant metabolism but density-diversity mismatch in springtails.

Author

Potapov AM, Guerra CA, van den Hoogen J, Babenko A, Bellini BC, Berg MP, Chown SL, Deharveng L, Kováč Ľ, Kuznetsova NA, Ponge JF, Potapov MB, Russell DJ, Alexandre D, Alatalo JM, Arbea JI, Bandyopadhyaya I, Bernava V, Bokhorst S, Bolger T, Castaño-Meneses G, Chauvat M, Chen TW, Chomel M, Classen AT, Cortet J, Čuchta P, Manuela de la Pedrosa A, Ferreira SSD, Fiera C, Filser J, Franken O, Fujii S, Koudji EG, Gao M, Gendreau-Berthiaume B, Gomez-Pamies DF, Greve M, Tanya Handa I, Heiniger C, Holmstrup M, Homet P, Ivask M, Janion-Scheepers C, Jochum M, Joimel S, Claudia S Jorge B, Jucevica E, Ferlian O, Iuñes de Oliveira Filho LC, Klauberg-Filho O, Baretta D, Krab EJ, Kuu A, de Lima ECA, Lin D, Lindo Z, Liu A, Lu JZ, Luciañez MJ, Marx MT, McCary MA, Minor MA, Nakamori T, Negri I, Ochoa-Hueso R, Palacios-Vargas JG, Pollierer MM, Querner P, Raschmanová N, Rashid MI, Raymond-Léonard LJ, Rousseau L, Saifutdinov RA, Salmon S, Sayer EJ, Scheunemann N, Scholz C, Seeber J, Shveenkova YB, Stebaeva SK, Sterzynska M, Sun X, Susanti WI, Taskaeva AA, Thakur MP, Tsiafouli MA, Turnbull MS, Twala MN, Uvarov AV, Venier LA, Widenfalk LA, Winck BR, Winkler D, Wu D, Xie Z, Yin R, Zeppelini D, Crowther TW, Eisenhauer N, and Scheu S

Subjects
Humans, Animals, Biodiversity, Tundra, Soil, Ecosystem, Arthropods
Abstract

Soil life supports the functioning and biodiversity of terrestrial ecosystems. Springtails (Collembola) are among the most abundant soil arthropods regulating soil fertility and flow of energy through above- and belowground food webs. However, the global distribution of springtail diversity and density, and how these relate to energy fluxes remains unknown. Here, using a global dataset representing 2470 sites, we estimate the total soil springtail biomass at 27.5 megatons carbon, which is threefold higher than wild terrestrial vertebrates, and record peak densities up to 2 million individuals per square meter in the tundra. Despite a 20-fold biomass difference between the tundra and the tropics, springtail energy use (community metabolism) remains similar across the latitudinal gradient, owing to the changes in temperature with latitude. Neither springtail density nor community metabolism is predicted by local species richness, which is high in the tropics, but comparably high in some temperate forests and even tundra. Changes in springtail activity may emerge from latitudinal gradients in temperature, predation and resource limitation in soil communities. Contrasting relationships of biomass, diversity and activity of springtail communities with temperature suggest that climate warming will alter fundamental soil biodiversity metrics in different directions, potentially restructuring terrestrial food webs and affecting soil functioning., (© 2023. The Author(s).)

Published
2023
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7. A thesaurus for soil invertebrate trait-based approaches.

Author

Pey B, Laporte MA, Nahmani J, Auclerc A, Capowiez Y, Caro G, Cluzeau D, Cortet J, Decaëns T, Dubs F, Joimel S, Guernion M, Briard C, Grumiaux F, Laporte B, Pasquet A, Pelosi C, Pernin C, Ponge JF, Salmon S, Santorufo L, and Hedde M

Subjects
Animals, Population Dynamics, Biodiversity, Ecosystem, Invertebrates physiology, Soil
Abstract

Soil invertebrates are known to be much involved in soil behaviour and therefore in the provision of ecosystem services. Functional trait-based approaches are methodologies which can be used to understand soil invertebrates' responses to their environment. They (i) improve the predictions and (ii) are less dependent on space and time. The way traits have been used recently has led to misunderstandings in the integration and interpretation of data. Trait semantics are especially concerned. The aim of this paper is to propose a thesaurus for soil invertebrate trait-based approaches. T-SITA, an Internet platform, is the first initiative to deal with the semantics of traits and ecological preferences for soil invertebrates. It reflects the agreement of a scientific expert community to fix semantic properties (e.g. definition) of approximately 100 traits and ecological preferences. In addition, T-SITA has been successfully linked with a fully operational database of soil invertebrate traits. Such a link enhances data integration and improves the scientific integrity of data.

Published
2014
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