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The present bias is a well-documented behavioral trait that significantly influences human decision-making, with present-biased agents often prioritizing immediate rewards over long-term benefits, leading to suboptimal outcomes in various real-world scenarios. Kleinberg and Oren (2014) proposed a popular graph-theoretical model of inconsistent planning to capture the behavior of present-biased agents. In this model, a multi-step project is represented by a weighted directed acyclic task graph, where the agent traverses the graph based on present-biased preferences. We use the model of Kleinberg and Oren to address the principal-agent problem, where a principal, fully aware of the agent's present bias, aims to modify an existing project by adding or deleting tasks. The challenge is to create a modified project that satisfies two somewhat contradictory conditions. On one hand, the present-biased agent should select specific tasks deemed important by the principal. On the other hand, if the anticipated costs in the modified project become too high for the agent, there is a risk of the agent abandoning the entire project, which is not in the principal's interest. To tackle this issue, we leverage the tools of parameterized complexity to investigate whether the principal's strategy can be efficiently identified. We provide algorithms and complexity bounds for this problem., Comment: Accepted at ECAI 2024

We propose a novel clustering model encompassing two well-known clustering models: k-center clustering and k-median clustering. In the Hybrid k-Clusetring problem, given a set P of points in R^d, an integer k, and a non-negative real r, our objective is to position k closed balls of radius r to minimize the sum of distances from points not covered by the balls to their closest balls. Equivalently, we seek an optimal L_1-fitting of a union of k balls of radius r to a set of points in the Euclidean space. When r=0, this corresponds to k-median; when the minimum sum is zero, indicating complete coverage of all points, it is k-center. Our primary result is a bicriteria approximation algorithm that, for a given \epsilon>0, produces a hybrid k-clustering with balls of radius (1+\epsilon)r. This algorithm achieves a cost at most 1+\epsilon of the optimum, and it operates in time 2^{(kd/\epsilon)^{O(1)}} n^{O(1)}. Notably, considering the established lower bounds on k-center and k-median, our bicriteria approximation stands as the best possible result for Hybrid k-Clusetring., Comment: Accepted at APPROX 2024

{\sc Vertex $(s, t)$-Cut} and {\sc Vertex Multiway Cut} are two fundamental graph separation problems in algorithmic graph theory. We study matroidal generalizations of these problems, where in addition to the usual input, we are given a representation $R \in \mathbb{F}^{r \times n}$ of a linear matroid $\mathcal{M} = (V(G), \mathcal{I})$ of rank $r$ in the input, and the goal is to determine whether there exists a vertex subset $S \subseteq V(G)$ that has the required cut properties, as well as is independent in the matroid $\mathcal{M}$. We refer to these problems as {\sc Independent Vertex $(s, t)$-cut}, and {\sc Independent Multiway Cut}, respectively. We show that these problems are fixed-parameter tractable ({\sf FPT}) when parameterized by the solution size (which can be assumed to be equal to the rank of the matroid $\mathcal{M}$). These results are obtained by exploiting the recent technique of flow augmentation [Kim et al.~STOC '22], combined with a dynamic programming algorithm on flow-paths \'a la [Feige and Mahdian,~STOC '06] that maintains a representative family of solutions w.r.t.~the given matroid [Marx, TCS '06; Fomin et al., JACM]. As a corollary, we also obtain {\sf FPT} algorithms for the independent version of {\sc Odd Cycle Transversal}. Further, our results can be generalized to other variants of the problems, e.g., weighted versions, or edge-deletion versions.

We study the following Independent Stable Set problem. Let G be an undirected graph and M = (V(G),I) be a matroid whose elements are the vertices of G. For an integer k\geq 1, the task is to decide whether G contains a set S\subseteq V(G) of size at least k which is independent (stable) in G and independent in M. This problem generalizes several well-studied algorithmic problems, including Rainbow Independent Set, Rainbow Matching, and Bipartite Matching with Separation. We show that - When the matroid M is represented by the independence oracle, then for any computable function f, no algorithm can solve Independent Stable Set using f(k)n^{o(k)} calls to the oracle. - On the other hand, when the graph G is of degeneracy d, then the problem is solvable in time O((d+1)^kn), and hence is FPT parameterized by d+k. Moreover, when the degeneracy d is a constant (which is not a part of the input), the problem admits a kernel polynomial in k. More precisely, we prove that for every integer d\geq 0, the problem admits a kernelization algorithm that in time n^{O(d)} outputs an equivalent framework with a graph on dk^{O(d)} vertices. A lower bound complements this when d is part of the input: Independent Stable Set does not admit a polynomial kernel when parameterized by k+d unless NP \subseteq coNP/poly. This lower bound holds even when M is a partition matroid. - Another set of results concerns the scenario when the graph G is chordal. In this case, our computational lower bound excludes an FPT algorithm when the input matroid is given by its independence oracle. However, we demonstrate that Independent Stable Set can be solved in 2^{O(k)}||M||^{O(1)} time when M is a linear matroid given by its representation. In the same setting, Independent Stable Set does not have a polynomial kernel when parameterized by k unless NP\subseteq coNP/poly., Comment: The full version of a paper accepted for SWAT 2024

The connection between Hamiltonicity and the independence numbers of graphs has been a fundamental aspect of Graph Theory since the seminal works of the 1960s. This paper presents a novel algorithmic perspective on these classical problems. Our contributions are twofold. First, we establish that a wide array of problems in undirected graphs, encompassing problems such as Hamiltonian Path and Cycle, Path Cover, Largest Linkage, and Topological Minor Containment are fixed-parameter tractable (FPT) parameterized by the independence number of a graph. To the best of our knowledge, these results mark the first instances of FPT problems for such parameterization. Second, we extend the algorithmic scope of the Gallai-Milgram theorem. The original theorem by Gallai and Milgram, asserts that for a graph G with the independence number \alpha(G), the vertex set of G can be covered by at most \alpha(G) vertex-disjoint paths. We show that determining whether a graph can be covered by fewer than \alpha(G) - k vertex-disjoint paths is FPT parameterized by k. Notably, the independence number parameterization, which describes graph's density, departs from the typical flow of research in parameterized complexity, which focuses on parameters describing graph's sparsity, like treewidth or vertex cover.

We examine the possibility of approximating Maximum Vertex-Disjoint Shortest Paths. In this problem, the input is an edge-weighted (directed or undirected) $n$-vertex graph $G$ along with $k$ terminal pairs $(s_1,t_1),(s_2,t_2),\ldots,(s_k,t_k)$. The task is to connect as many terminal pairs as possible by pairwise vertex-disjoint paths such that each path is a shortest path between the respective terminals. Our work is anchored in the recent breakthrough by Lochet [SODA '21], which demonstrates the polynomial-time solvability of the problem for a fixed value of $k$. Lochet's result implies the existence of a polynomial-time $ck$-approximation for Maximum Vertex-Disjoint Shortest Paths, where $c \leq 1$ is a constant. Our first result suggests that this approximation algorithm is, in a sense, the best we can hope for. More precisely, assuming the gap-ETH, we exclude the existence of an $o(k)$-approximations within $f(k) \cdot $poly($n$) time for any function $f$ that only depends on $k$. Our second result demonstrates the infeasibility of achieving an approximation ratio of $n^{\frac{1}{2}-\varepsilon}$ in polynomial time, unless P = NP. It is not difficult to show that a greedy algorithm selecting a path with the minimum number of arcs results in a $\lceil\sqrt{\ell}\rceil$-approximation, where $\ell$ is the number of edges in all the paths of an optimal solution. Since $\ell \leq n$, this underscores the tightness of the $n^{\frac{1}{2}-\varepsilon}$-inapproximability bound. Additionally, we establish that Maximum Vertex-Disjoint Shortest Paths is fixed-parameter tractable when parameterized by $\ell$ but does not admit a polynomial kernel. Our hardness results hold for undirected graphs with unit weights, while our positive results extend to scenarios where the input graph is directed and features arbitrary (non-negative) edge weights.

According to the classic Chv{\'{a}}tal's Lemma from 1977, a graph of minimum degree $\delta(G)$ contains every tree on $\delta(G)+1$ vertices. Our main result is the following algorithmic "extension" of Chv\'{a}tal's Lemma: For any $n$-vertex graph $G$, integer $k$, and a tree $T$ on at most $\delta(G)+k$ vertices, deciding whether $G$ contains a subgraph isomorphic to $T$, can be done in time $f(k)\cdot n^{\mathcal{O}(1)}$ for some function $f$ of $k$ only. The proof of our main result is based on an interplay between extremal graph theory and parameterized algorithms., Comment: Accepted to SODA 2024

A vertex of a plane digraph is bimodal if all its incoming edges (and hence all its outgoing edges) are consecutive in the cyclic order around it. A plane digraph is bimodal if all its vertices are bimodal. Bimodality is at the heart of many types of graph layouts, such as upward drawings, level-planar drawings, and L-drawings. If the graph is not bimodal, the Maximum Bimodal Subgraph (MBS) problem asks for an embedding-preserving bimodal subgraph with the maximum number of edges. We initiate the study of the MBS problem from the parameterized complexity perspective with two main results: (i) we describe an FPT algorithm parameterized by the branchwidth (and hence by the treewidth) of the graph; (ii) we establish that MBS parameterized by the number of non-bimodal vertices admits a polynomial kernel. As the byproduct of these results, we obtain a subexponential FPT algorithm and an efficient polynomial-time approximation scheme for MBS., Comment: Appears in the Proceedings of the 31st International Symposium on Graph Drawing and Network Visualization (GD 2023)

We study the \textsc{$\alpha$-Fixed Cardinality Graph Partitioning ($\alpha$-FCGP)} problem, the generic local graph partitioning problem introduced by Bonnet et al. [Algorithmica 2015]. In this problem, we are given a graph $G$, two numbers $k,p$ and $0\leq\alpha\leq 1$, the question is whether there is a set $S\subseteq V$ of size $k$ with a specified coverage function $cov_{\alpha}(S)$ at least $p$ (or at most $p$ for the minimization version). The coverage function $cov_{\alpha}(\cdot)$ counts edges with exactly one endpoint in $S$ with weight $\alpha$ and edges with both endpoints in $S$ with weight $1 - \alpha$. $\alpha$-FCGP generalizes a number of fundamental graph problems such as \textsc{Densest $k$-Subgraph}, \textsc{Max $k$-Vertex Cover}, and \textsc{Max $(k,n-k)$-Cut}. A natural question in the study of $\alpha$-FCGP is whether the algorithmic results known for its special cases, like \textsc{Max $k$-Vertex Cover}, could be extended to more general settings. One of the simple but powerful methods for obtaining parameterized approximation [Manurangsi, SOSA 2019] and subexponential algorithms [Fomin et al. IPL 2011] for \textsc{Max $k$-Vertex Cover} is based on the greedy vertex degree orderings. The main insight of our work is that the idea of greed vertex degree ordering could be used to design fixed-parameter approximation schemes (FPT-AS) for $\alpha > 0$ and the subexponential-time algorithms for the problem on apex-minor free graphs for maximization with $\alpha > 1/3$ and minimization with $\alpha < 1/3$., Comment: Updated version of MFCS 2023 paper

We consider the following problem about dispersing points. Given a set of points in the plane, the task is to identify whether by moving a small number of points by small distance, we can obtain an arrangement of points such that no pair of points is ``close" to each other. More precisely, for a family of $n$ points, an integer $k$, and a real number $d > 0$, we ask whether at most $k$ points could be relocated, each point at distance at most $d$ from its original location, such that the distance between each pair of points is at least a fixed constant, say $1$. A number of approximation algorithms for variants of this problem, under different names like distant representatives, disk dispersing, or point spreading, are known in the literature. However, to the best of our knowledge, the parameterized complexity of this problem remains widely unexplored. We make the first step in this direction by providing a kernelization algorithm that, in polynomial time, produces an equivalent instance with $O(d^2k^3)$ points. As a byproduct of this result, we also design a non-trivial fixed-parameter tractable (FPT) algorithm for the problem, parameterized by $k$ and $d$. Finally, we complement the result about polynomial kernelization by showing a lower bound that rules out the existence of a kernel whose size is polynomial in $k$ alone, unless $\mathsf{NP} \subseteq \mathsf{coNP}/\text{poly}$.

The fundamental theorem of Tur\'{a}n from Extremal Graph Theory determines the exact bound on the number of edges $t_r(n)$ in an $n$-vertex graph that does not contain a clique of size $r+1$. We establish an interesting link between Extremal Graph Theory and Algorithms by providing a simple compression algorithm that in linear time reduces the problem of finding a clique of size $\ell$ in an $n$-vertex graph $G$ with $m \ge t_r(n)-k$ edges, where $\ell\leq r+1$, to the problem of finding a maximum clique in a graph on at most $5k$ vertices. This also gives us an algorithm deciding in time $2.49^{k}\cdot(n + m)$ whether $G$ has a clique of size $\ell$. As a byproduct of the new compression algorithm, we give an algorithm that in time $2^{\mathcal{O}(td^2)} \cdot n^2$ decides whether a graph contains an independent set of size at least $n/(d+1) + t$. Here $d$ is the average vertex degree of the graph $G$. The multivariate complexity analysis based on ETH indicates that the asymptotical dependence on several parameters in the running times of our algorithms is tight.

For a given graph $G$, a depth-first search (DFS) tree $T$ of $G$ is an $r$-rooted spanning tree such that every edge of $G$ is either an edge of $T$ or is between a \textit{descendant} and an \textit{ancestor} in $T$. A graph $G$ together with a DFS tree is called a \textit{lineal topology} $\mathcal{T} = (G, r, T)$. Sam et al. (2023) initiated study of the parameterized complexity of the \textsc{Min-LLT} and \textsc{Max-LLT} problems which ask, given a graph $G$ and an integer $k\geq 0$, whether $G$ has a DFS tree with at most $k$ and at least $k$ leaves, respectively. Particularly, they showed that for the dual parameterization, where the tasks are to find DFS trees with at least $n-k$ and at most $n-k$ leaves, respectively, these problems are fixed-parameter tractable when parameterized by $k$. However, the proofs were based on Courcelle's theorem, thereby making the running times a tower of exponentials. We prove that both problems admit polynomial kernels with $\Oh(k^3)$ vertices. In particular, this implies FPT algorithms running in $k^{\Oh(k)}\cdot n^{O(1)}$ time. We achieve these results by making use of a $\Oh(k)$-sized vertex cover structure associated with each problem. This also allows us to demonstrate polynomial kernels for \textsc{Min-LLT} and \textsc{Max-LLT} for the structural parameterization by the vertex cover number., Comment: 16 pages, accepted for presentation at FCT 2023

The task of the broadcast problem is, given a graph G and a source vertex s, to compute the minimum number of rounds required to disseminate a piece of information from s to all vertices in the graph. It is assumed that, at each round, an informed vertex can transmit the information to at most one of its neighbors. The broadcast problem is known to NP-hard. We show that the problem is FPT when parametrized by the size k of a feedback edge-set, or by the size k of a vertex-cover, or by k=n-t where t is the input deadline for the broadcast protocol to complete., Comment: Full version of WG 2023 paper

Parameterization above (or below) a guarantee is a successful concept in parameterized algorithms. The idea is that many computational problems admit ``natural'' guarantees bringing to algorithmic questions whether a better solution (above the guarantee) could be obtained efficiently. The above guarantee paradigm has led to several exciting discoveries in the areas of parameterized algorithms and kernelization. We argue that this paradigm could bring forth fresh perspectives on well-studied problems in approximation algorithms. Our example is the longest cycle problem. One of the oldest results in extremal combinatorics is the celebrated Dirac's theorem from 1952. Dirac's theorem provides the following guarantee on the length of the longest cycle: for every 2-connected n-vertex graph G with minimum degree \delta(G)\leq n/2, the length of a longest cycle L is at least 2\delta(G). Thus, the ``essential'' part in finding the longest cycle is in approximating the ``offset'' k = L - 2 \delta(G). The main result of this paper is the above-guarantee approximation theorem for k. Informally, the theorem says that approximating the offset k is not harder than approximating the total length L of a cycle. In other words, for any (reasonably well-behaved) function f, a polynomial time algorithm constructing a cycle of length f(L) in an undirected graph with a cycle of length L, yields a polynomial time algorithm constructing a cycle of length 2\delta(G)+\Omega(f(k))., Comment: Full version of ICALP 2023 paper

A framework consists of an undirected graph $G$ and a matroid $M$ whose elements correspond to the vertices of $G$. Recently, Fomin et al. [SODA 2023] and Eiben et al. [ArXiV 2023] developed parameterized algorithms for computing paths of rank $k$ in frameworks. More precisely, for vertices $s$ and $t$ of $G$, and an integer $k$, they gave FPT algorithms parameterized by $k$ deciding whether there is an $(s,t)$-path in $G$ whose vertex set contains a subset of elements of $M$ of rank $k$. These algorithms are based on Schwartz-Zippel lemma for polynomial identity testing and thus are randomized, and therefore the existence of a deterministic FPT algorithm for this problem remains open. We present the first deterministic FPT algorithm that solves the problem in frameworks whose underlying graph $G$ is planar. While the running time of our algorithm is worse than the running times of the recent randomized algorithms, our algorithm works on more general classes of matroids. In particular, this is the first FPT algorithm for the case when matroid $M$ is represented over rationals. Our main technical contribution is the nontrivial adaptation of the classic irrelevant vertex technique to frameworks to reduce the given instance to one of bounded treewidth. This allows us to employ the toolbox of representative sets to design a dynamic programming procedure solving the problem efficiently on instances of bounded treewidth., Comment: 26 pages, 6 figures

We study the following Two-Sets Cut-Uncut problem on planar graphs. Therein, one is given an undirected planar graph $G$ and two sets of vertices $S$ and $T$. The question is, what is the minimum number of edges to remove from $G$, such that we separate all of $S$ from all of $T$, while maintaining that every vertex in $S$, and respectively in $T$, stays in the same connected component. We show that this problem can be solved in time $2^{|S|+|T|} n^{O(1)}$ with a one-sided error randomized algorithm. Our algorithm implies a polynomial-time algorithm for the network diversion problem on planar graphs, which resolves an open question from the literature. More generally, we show that Two-Sets Cut-Uncut remains fixed-parameter tractable even when parameterized by the number $r$ of faces in the plane graph covering the terminals $S \cup T$, by providing an algorithm of running time $4^{r + O(\sqrt r)} n^{O(1)}$., Comment: 22 pages, 5 figures

We study the kernelization of exploration problems on temporal graphs. A temporal graph consists of a finite sequence of snapshot graphs $\mathcal{G}=(G_1, G_2, \dots, G_L)$ that share a common vertex set but might have different edge sets. The non-strict temporal exploration problem (NS-TEXP for short) introduced by Erlebach and Spooner, asks if a single agent can visit all vertices of a given temporal graph where the edges traversed by the agent are present in non-strict monotonous time steps, i.e., the agent can move along the edges of a snapshot graph with infinite speed. The exploration must at the latest be completed in the last snapshot graph. The optimization variant of this problem is the $k$-arb NS-TEXP problem, where the agent's task is to visit at least $k$ vertices of the temporal graph. We show that under standard computational complexity assumptions, neither of the problems NS-TEXP nor $k$-arb NS-TEXP allow for polynomial kernels in the standard parameters: number of vertices $n$, lifetime $L$, number of vertices to visit $k$, and maximal number of connected components per time step $\gamma$; as well as in the combined parameters $L+k$, $L + \gamma$, and $k+\gamma$. On the way to establishing these lower bounds, we answer a couple of questions left open by Erlebach and Spooner. We also initiate the study of structural kernelization by identifying a new parameter of a temporal graph $p(\mathcal{G}) = \sum_{i=1}^{L} (|E(G_i)|) - |V(G)| +1$. Informally, this parameter measures how dynamic the temporal graph is. Our main algorithmic result is the construction of a polynomial (in $p(\mathcal{G})$) kernel for the more general Weighted $k$-arb NS-TEXP problem, where weights are assigned to the vertices and the task is to find a temporal walk of weight at least $k$.

The problem of packing of equal disks (or circles) into a rectangle is a fundamental geometric problem. (By a packing here we mean an arrangement of disks in a rectangle without overlapping.) We consider the following algorithmic generalization of the equal disk packing problem. In this problem, for a given packing of equal disks into a rectangle, the question is whether by changing positions of a small number of disks, we can allocate space for packing more disks. More formally, in the repacking problem, for a given set of $n$ equal disks packed into a rectangle and integers $k$ and $h$, we ask whether it is possible by changing positions of at most $h$ disks to pack $n+k$ disks. Thus the problem of packing equal disks is the special case of our problem with $n=h=0$. While the computational complexity of packing equal disks into a rectangle remains open, we prove that the repacking problem is NP-hard already for $h=0$. Our main algorithmic contribution is an algorithm that solves the repacking problem in time $(h+k)^{O(h+k)}\cdot |I|^{O(1)}$, where $I$ is the input size. That is, the problem is fixed-parameter tractable parameterized by $k$ and $h$., Comment: Full version of ICALP 2022 paper

We introduce the following submodular generalization of the Shortest Cycle problem. For a nonnegative monotone submodular cost function $f$ defined on the edges (or the vertices) of an undirected graph $G$, we seek for a cycle $C$ in $G$ of minimum cost $\textsf{OPT}=f(C)$. We give an algorithm that given an $n$-vertex graph $G$, parameter $\varepsilon > 0$, and the function $f$ represented by an oracle, in time $n^{\mathcal{O}(\log 1/\varepsilon)}$ finds a cycle $C$ in $G$ with $f(C)\leq (1+\varepsilon)\cdot \textsf{OPT}$. This is in sharp contrast with the non-approximability of the closely related Monotone Submodular Shortest $(s,t)$-Path problem, which requires exponentially many queries to the oracle for finding an $n^{2/3-\varepsilon}$-approximation [Goel et al., FOCS 2009]. We complement our algorithm with a matching lower bound. We show that for every $\varepsilon > 0$, obtaining a $(1+\varepsilon)$-approximation requires at least $n^{\Omega(\log 1/ \varepsilon)}$ queries to the oracle. When the function $f$ is integer-valued, our algorithm yields that a cycle of cost $\textsf{OPT}$ can be found in time $n^{\mathcal{O}(\log \textsf{OPT})}$. In particular, for $\textsf{OPT}=n^{\mathcal{O}(1)}$ this gives a quasipolynomial-time algorithm computing a cycle of minimum submodular cost. Interestingly, while a quasipolynomial-time algorithm often serves as a good indication that a polynomial time complexity could be achieved, we show a lower bound that $n^{\mathcal{O}(\log n)}$ queries are required even when $\textsf{OPT} = \mathcal{O}(n)$., Comment: 17 pages, 1 figure. Accepted to SODA 2023

The disjoint paths logic, FOL+DP, is an extension of First-Order Logic (FOL) with the extra atomic predicate $\mathsf{dp}_k(x_1,y_1,\ldots,x_k,y_k),$ expressing the existence of internally vertex-disjoint paths between $x_i$ and $y_i,$ for $i\in\{1,\ldots, k\}$. This logic can express a wide variety of problems that escape the expressibility potential of FOL. We prove that for every proper minor-closed graph class, model-checking for FOL+DP can be done in quadratic time. We also introduce an extension of FOL+DP, namely the scattered disjoint paths logic, FOL+SDP, where we further consider the atomic predicate $s{\sf -sdp}_k(x_1,y_1,\ldots,x_k,y_k),$ demanding that the disjoint paths are within distance bigger than some fixed value $s$. Using the same technique we prove that model-checking for FOL+SDP can be done in quadratic time on classes of graphs with bounded Euler genus., Comment: An extended abstract of this paper appeared in the Proceedings of the 34th Annual ACM-SIAM Symposium on Discrete Algorithms (SODA 2023)

In this paper we initiate a systematic study of exact algorithms for well-known clustering problems, namely $k$-Median and $k$-Means. In $k$-Median, the input consists of a set $X$ of $n$ points belonging to a metric space, and the task is to select a subset $C \subseteq X$ of $k$ points as centers, such that the sum of the distances of every point to its nearest center is minimized. In $k$-Means, the objective is to minimize the sum of squares of the distances instead. It is easy to design an algorithm running in time $\max_{k\leq n} {n \choose k} n^{O(1)} = O^*(2^n)$ ($O^*(\cdot)$ notation hides polynomial factors in $n$). We design first non-trivial exact algorithms for these problems. In particular, we obtain an $O^*((1.89)^n)$ time exact algorithm for $k$-Median that works for any value of $k$. Our algorithm is quite general in that it does not use any properties of the underlying (metric) space -- it does not even require the distances to satisfy the triangle inequality. In particular, the same algorithm also works for $k$-Means. We complement this result by showing that the running time of our algorithm is asymptotically optimal, up to the base of the exponent. That is, unless ETH fails, there is no algorithm for these problems running in time $2^{o(n)} \cdot n^{O(1)}$. Finally, we consider the "supplier" versions of these clustering problems, where, in addition to the set $X$ we are additionally given a set of $m$ candidate centers $F$, and objective is to find a subset of $k$ centers from $F$. The goal is still to minimize the $k$-Median/$k$-Means/$k$-Center objective. For these versions we give a $O(2^n (mn)^{O(1)})$ time algorithms using subset convolution. We complement this result by showing that, under the Set Cover Conjecture, the supplier versions of these problems do not admit an exact algorithm running in time $2^{(1-\epsilon) n} (mn)^{O(1)}$., Comment: Accepted to IPEC 2022

The independence number of a tree decomposition is the maximum of the independence numbers of the subgraphs induced by its bags. The tree-independence number of a graph is the minimum independence number of a tree decomposition of it. Several NP-hard graph problems, like maximum weight independent set, can be solved in time n^{O(k)} if the input n-vertex graph is given together with a tree decomposition of independence number k. Yolov, in [SODA 2018], gave an algorithm that, given an n-vertex graph G and an integer k, in time n^{O(k^3)} either constructs a tree decomposition of G whose independence number is O(k^3) or correctly reports that the tree-independence number of G is larger than k. In this paper, we first give an algorithm for computing the tree-independence number with a better approximation ratio and running time and then prove that our algorithm is, in some sense, the best one can hope for. More precisely, our algorithm runs in time 2^{O(k^2)} n^{O(k)} and either outputs a tree decomposition of G with independence number at most $8k$, or determines that the tree-independence number of G is larger than k. This implies 2^{O(k^2)} n^{O(k)}-time algorithms for various problems, like maximum weight independent set, parameterized by the tree-independence number k without needing the decomposition as an input. Assuming Gap-ETH, an n^{\Omega(k)} factor in the running time is unavoidable for any approximation algorithm for the tree-independence number. Our second result is that the exact computation of the tree-independence number is para-NP-hard: We show that for every constant k \ge 4 it is NP-hard to decide if a given graph has the tree-independence number at most k., Comment: Accepted at ICALP 2024

We introduce a general method for obtaining fixed-parameter algorithms for problems about finding paths in undirected graphs, where the length of the path could be unbounded in the parameter. The first application of our method is as follows. We give a randomized algorithm, that given a colored $n$-vertex undirected graph, vertices $s$ and $t$, and an integer $k$, finds an $(s,t)$-path containing at least $k$ different colors in time $2^k n^{O(1)}$. This is the first FPT algorithm for this problem, and it generalizes the algorithm of Bj\"orklund, Husfeldt, and Taslaman [SODA 2012] on finding a path through $k$ specified vertices. It also implies the first $2^k n^{O(1)}$ time algorithm for finding an $(s,t)$-path of length at least $k$. Our method yields FPT algorithms for even more general problems. For example, we consider the problem where the input consists of an $n$-vertex undirected graph $G$, a matroid $M$ whose elements correspond to the vertices of $G$ and which is represented over a finite field of order $q$, a positive integer weight function on the vertices of $G$, two sets of vertices $S,T \subseteq V(G)$, and integers $p,k,w$, and the task is to find $p$ vertex-disjoint paths from $S$ to $T$ so that the union of the vertices of these paths contains an independent set of $M$ of cardinality $k$ and weight $w$, while minimizing the sum of the lengths of the paths. We give a $2^{p+O(k^2 \log (q+k))} n^{O(1)} w$ time randomized algorithm for this problem., Comment: 50 pages, 16 figures

A linkage in a graph $G$ of size $k$ is a subgraph $L$ of $G$ whose connected components are $k$ paths. The pattern of a linkage of size $k$ is the set of $k$ pairs formed by the endpoints of these paths. A consequence of the Unique Linkage Theorem is the following: there exists a function $f:\mathbb{N}\to\mathbb{N}$ such that if a plane graph $G$ contains a sequence $\mathcal{C}$ of at least $f(k)$ nested cycles and a linkage of size at most $k$ whose pattern vertices lay outside the outer cycle of $\mathcal{C},$ then $G$ contains a linkage with the same pattern avoiding the inner cycle of $\mathcal{C}$. In this paper we prove the following variant of this result: Assume that all the cycles in $\mathcal{C}$ are "orthogonally" traversed by a linkage $P$ and $L$ is a linkage whose pattern vertices may lay either outside the outer cycle or inside the inner cycle of $\mathcal{C}:=[C_{1},\ldots,C_{p},\ldots,C_{2p-1}]$. We prove that there are two functions $g,f:\mathbb{N}\to\mathbb{N}$, such that if $L$ has size at most $k$, $P$ has size at least $f(k),$ and $|\mathcal{C}|\geq g(k)$, then there is a linkage with the same pattern as $L$ that is "internally combed" by $P$, in the sense that $L\cap C_{p}\subseteq P\cap C_{p}$. In fact, we prove this result in the most general version where the linkage $L$ is $s$-scattered: no two vertices of distinct paths of $L$ are within distance at most $s$. We deduce several variants of this result in the cases where $s=0$ and $s>0$. These variants permit the application of the unique linkage theorem on several path routing problems on embedded graphs., Comment: This is an extension of the combinatorial results appeared in [Petr A. Golovach, Giannos Stamoulis, Dimitrios M. Thilikos: Hitting Topological Minor Models in Planar Graphs is Fixed Parameter Tractable. SODA 2020: 931-950]. arXiv admin note: text overlap with arXiv:1907.02919

In 1959, Erd\H{o}s and Gallai proved that every graph G with average vertex degree ad(G)\geq 2 contains a cycle of length at least ad(G). We provide an algorithm that for k\geq 0 in time 2^{O(k)} n^{O(1)} decides whether a 2-connected n-vertex graph G contains a cycle of length at least ad(G)+k. This resolves an open problem explicitly mentioned in several papers. The main ingredients of our algorithm are new graph-theoretical results interesting on their own.

We study two "above guarantee" versions of the classical Longest Path problem on undirected and directed graphs and obtain the following results. In the first variant of Longest Path that we study, called Longest Detour, the task is to decide whether a graph has an (s,t)-path of length at least dist_G(s,t)+k (where dist_G(s,t) denotes the length of a shortest path from s to t). Bez\'akov\'a et al. proved that on undirected graphs the problem is fixed-parameter tractable (FPT) by providing an algorithm of running time 2^{O (k)} n. Further, they left the parameterized complexity of the problem on directed graphs open. Our first main result establishes a connection between Longest Detour on directed graphs and 3-Disjoint Paths on directed graphs. Using these new insights, we design a 2^{O(k)} n^{O(1)} time algorithm for the problem on directed planar graphs. Further, the new approach yields a significantly faster FPT algorithm on undirected graphs. In the second variant of Longest Path, namely Longest Path Above Diameter, the task is to decide whether the graph has a path of length at least diam(G)+k (diam(G) denotes the length of a longest shortest path in a graph G). We obtain dichotomy results about Longest Path Above Diameter on undirected and directed graphs. For (un)directed graphs, Longest Path Above Diameter is NP-complete even for k=1. However, if the input undirected graph is 2-connected, then the problem is FPT. On the other hand, for 2-connected directed graphs, we show that Longest Path Above Diameter is solvable in polynomial time for each k\in{1,\dots, 4} and is NP-complete for every k\geq 5. The parameterized complexity of Longest Path Above Diameter on general directed graphs remains an interesting open problem., Comment: To appear in STACS 2022

$k$-means and $k$-median clustering are powerful unsupervised machine learning techniques. However, due to complicated dependences on all the features, it is challenging to interpret the resulting cluster assignments. Moshkovitz, Dasgupta, Rashtchian, and Frost [ICML 2020] proposed an elegant model of explainable $k$-means and $k$-median clustering. In this model, a decision tree with $k$ leaves provides a straightforward characterization of the data set into clusters. We study two natural algorithmic questions about explainable clustering. (1) For a given clustering, how to find the "best explanation" by using a decision tree with $k$ leaves? (2) For a given set of points, how to find a decision tree with $k$ leaves minimizing the $k$-means/median objective of the resulting explainable clustering? To address the first question, we introduce a new model of explainable clustering. Our model, inspired by the notion of outliers in robust statistics, is the following. We are seeking a small number of points (outliers) whose removal makes the existing clustering well-explainable. For addressing the second question, we initiate the study of the model of Moshkovitz et al. from the perspective of multivariate complexity. Our rigorous algorithmic analysis sheds some light on the influence of parameters like the input size, dimension of the data, the number of outliers, the number of clusters, and the approximation ratio, on the computational complexity of explainable clustering.

We introduce a novel model-theoretic framework inspired from graph modification and based on the interplay between model theory and algorithmic graph minors. The core of our framework is a new compound logic operating with two types of sentences, expressing graph modification: the modulator sentence, defining some property of the modified part of the graph, and the target sentence, defining some property of the resulting graph. In our framework, modulator sentences are in counting monadic second-order logic (CMSOL) and have models of bounded treewidth, while target sentences express first-order logic (FOL) properties along with minor-exclusion. Our logic captures problems that are not definable in first-order logic and, moreover, may have instances of unbounded treewidth. Also, it permits the modeling of wide families of problems involving vertex/edge removals, alternative modulator measures (such as elimination distance or $\mathcal{G}$-treewidth), multistage modifications, and various cut problems. Our main result is that, for this compound logic, model-checking can be done in quadratic time. All derived algorithms are constructive and this, as a byproduct, extends the constructibility horizon of the algorithmic applications of the Graph Minors theorem of Robertson and Seymour. The proposed logic can be seen as a general framework to capitalize on the potential of the irrelevant vertex technique. It gives a way to deal with problem instances of unbounded treewidth, for which Courcelle's theorem does not apply. The proof of our meta-theorem combines novel combinatorial results related to the Flat Wall theorem along with elements of the proof of Courcelle's theorem and Gaifman's theorem. We finally prove extensions where the target property is expressible in FOL+DP, i.e., the enhancement of FOL with disjoint-paths predicates.

In this paper, we consider the Minimum-Load $k$-Clustering/Facility Location (MLkC) problem where we are given a set $P$ of $n$ points in a metric space that we have to cluster and an integer $k$ that denotes the number of clusters. Additionally, we are given a set $F$ of cluster centers in the same metric space. The goal is to select a set $C\subseteq F$ of $k$ centers and assign each point in $P$ to a center in $C$, such that the maximum load over all centers is minimized. Here the load of a center is the sum of the distances between it and the points assigned to it. Although clustering/facility location problems have a rich literature, the minimum-load objective is not studied substantially, and hence MLkC has remained a poorly understood problem. More interestingly, the problem is notoriously hard even in some special cases including the one in line metrics as shown by Ahmadian et al. [ACM Trans. Algo. 2018]. They also show APX-hardness of the problem in the plane. On the other hand, the best-known approximation factor for MLkC is $O(k)$, even in the plane. In this work, we study a fair version of MLkC inspired by the work of Chierichetti et al. [NeurIPS, 2017], which generalizes MLkC. Here the input points are colored by one of the $\ell$ colors denoting the group they belong to. MLkC is the special case with $\ell=1$. Considering this problem, we are able to obtain a $3$-approximation in $f(k,\ell)\cdot n^{O(1)}$ time. Also, our scheme leads to an improved $(1 + \epsilon)$-approximation in case of Euclidean norm, and in this case, the running time depends only polynomially on the dimension $d$. Our results imply the same approximations for MLkC with running time $f(k)\cdot n^{O(1)}$, achieving the first constant approximations for this problem in general and Euclidean metric spaces.

In this work, we study the $k$-median clustering problem with an additional equal-size constraint on the clusters, from the perspective of parameterized preprocessing. Our main result is the first lossy ($2$-approximate) polynomial kernel for this problem, parameterized by the cost of clustering. We complement this result by establishing lower bounds for the problem that eliminate the existences of an (exact) kernel of polynomial size and a PTAS.

De Berg et al. in [SICOMP 2020] gave an algorithmic framework for subexponential algorithms on geometric graphs with tight (up to ETH) running times. This framework is based on dynamic programming on graphs of weighted treewidth resulting in algorithms that use super-polynomial space. We introduce the notion of weighted treedepth and use it to refine the framework of de Berg et al. for obtaining polynomial space (with tight running times) on geometric graphs. As a result, we prove that for any fixed dimension $d \ge 2$ on intersection graphs of similarly-sized fat objects many well-known graph problems including Independent Set, $r$-Dominating Set for constant $r$, Cycle Cover, Hamiltonian Cycle, Hamiltonian Path, Steiner Tree, Connected Vertex Cover, Feedback Vertex Set, and (Connected) Odd Cycle Transversal are solvable in time $2^{O(n^{1-1/d})}$ and within polynomial space.

In general, a graph modification problem is defined by a graph modification operation $\boxtimes$ and a target graph property ${\cal P}$. Typically, the modification operation $\boxtimes$ may be vertex removal}, edge removal}, edge contraction}, or edge addition and the question is, given a graph $G$ and an integer $k$, whether it is possible to transform $G$ to a graph in ${\cal P}$ after applying $k$ times the operation $\boxtimes$ on $G$. This problem has been extensively studied for particilar instantiations of $\boxtimes$ and ${\cal P}$. In this paper we consider the general property ${\cal P}_{{\phi}}$ of being planar and, moreover, being a model of some First-Order Logic sentence ${\phi}$ (an FOL-sentence). We call the corresponding meta-problem Graph $\boxtimes$-Modification to Planarity and ${\phi}$ and prove the following algorithmic meta-theorem: there exists a function $f:\Bbb{N}^{2}\to\Bbb{N}$ such that, for every $\boxtimes$ and every FOL sentence ${\phi}$, the Graph $\boxtimes$-Modification to Planarity and ${\phi}$ is solvable in $f(k,|{\phi}|)\cdot n^2$ time. The proof constitutes a hybrid of two different classic techniques in graph algorithms. The first is the irrelevant vertex technique that is typically used in the context of Graph Minors and deals with properties such as planarity or surface-embeddability (that are not FOL-expressible) and the second is the use of Gaifman's Locality Theorem that is the theoretical base for the meta-algorithmic study of FOL-expressible problems.

A natural way of increasing our understanding of NP-complete graph problems is to restrict the input to a special graph class. Classes of $H$-free graphs, that is, graphs that do not contain some graph $H$ as an induced subgraph, have proven to be an ideal testbed for such a complexity study. However, if the forbidden graph $H$ contains a cycle or claw, then these problems often stay NP-complete. A recent complexity study on the $k$-Colouring problem shows that we may still obtain tractable results if we also bound the diameter of the $H$-free input graph. We continue this line of research by initiating a complexity study on the impact of bounding the diameter for a variety of classical vertex partitioning problems restricted to $H$-free graphs. We prove that bounding the diameter does not help for Independent Set, but leads to new tractable cases for problems closely related to 3-Colouring. That is, we show that Near-Bipartiteness, Independent Feedback Vertex Set, Independent Odd Cycle Transversal, Acyclic 3-Colouring and Star 3-Colouring are all polynomial-time solvable for chair-free graphs of bounded diameter. To obtain these results we exploit a new structural property of 3-colourable chair-free graphs.

We develop new algorithmic methods with provable guarantees for feature selection in regard to categorical data clustering. While feature selection is one of the most common approaches to reduce dimensionality in practice, most of the known feature selection methods are heuristics. We study the following mathematical model. We assume that there are some inadvertent (or undesirable) features of the input data that unnecessarily increase the cost of clustering. Consequently, we want to select a subset of the original features from the data such that there is a small-cost clustering on the selected features. More precisely, for given integers $\ell$ (the number of irrelevant features) and $k$ (the number of clusters), budget $B$, and a set of $n$ categorical data points (represented by $m$-dimensional vectors whose elements belong to a finite set of values $\Sigma$), we want to select $m-\ell$ relevant features such that the cost of any optimal $k$-clustering on these features does not exceed $B$. Here the cost of a cluster is the sum of Hamming distances ($\ell_0$-distances) between the selected features of the elements of the cluster and its center. The clustering cost is the total sum of the costs of the clusters. We use the framework of parameterized complexity to identify how the complexity of the problem depends on parameters $k$, $B$, and $|\Sigma|$. Our main result is an algorithm that solves the Feature Selection problem in time $f(k,B,|\Sigma|)\cdot m^{g(k,|\Sigma|)}\cdot n^2$ for some functions $f$ and $g$. In other words, the problem is fixed-parameter tractable parameterized by $B$ when $|\Sigma|$ and $k$ are constants. Our algorithm is based on a solution to a more general problem, Constrained Clustering with Outliers. We also complement our algorithmic findings with complexity lower bounds., Comment: 25 pages, full version

We examine the effect of bounding the diameter for well-studied variants of the Colouring problem. A colouring is acyclic, star, or injective if any two colour classes induce a forest, star forest or disjoint union of vertices and edges, respectively. The corresponding decision problems are Acyclic Colouring, Star Colouring and Injective Colouring. The last problem is also known as $L(1,1)$-Labelling and we also consider the framework of $L(a,b)$-Labelling. We prove a number of (almost-)complete complexity classifications. In particular, we show that for graphs of diameter at most $d$, Acyclic $3$-Colouring is polynomial-time solvable if $d\leq 2$ but NP-complete if $d\geq 4$, and Star $3$-Colouring is polynomial-time solvable if $d\leq 3$ but NP-complete for $d\geq 8$. As far as we are aware, Star $3$-Colouring is the first problem that exhibits a complexity jump for some $d\geq 3$. Our third main result is that $L(1,2)$-Labelling is NP-complete for graphs of diameter $2$; we relate the latter problem to a special case of Hamiltonian Path.

In the Categorical Clustering problem, we are given a set of vectors (matrix) A={a_1,\ldots,a_n} over \Sigma^m, where \Sigma is a finite alphabet, and integers k and B. The task is to partition A into k clusters such that the median objective of the clustering in the Hamming norm is at most B. That is, we seek a partition {I_1,\ldots,I_k} of {1,\ldots,n} and vectors c_1,\ldots,c_k\in\Sigma^m such that \sum_{i=1}^k\sum_{j\in I_i}d_h(c_i,a_j)\leq B, where d_H(a,b) is the Hamming distance between vectors a and b. Fomin, Golovach, and Panolan [ICALP 2018] proved that the problem is fixed-parameter tractable (for binary case \Sigma={0,1}) by giving an algorithm that solves the problem in time 2^{O(B\log B)} (mn)^{O(1)}. We extend this algorithmic result to a popular capacitated clustering model, where in addition the sizes of the clusters should satisfy certain constraints. More precisely, in Capacitated Clustering, in addition, we are given two non-negative integers p and q, and seek a clustering with p\leq |I_i|\leq q for all i\in{1,\ldots,k}. Our main theorem is that Capacitated Clustering is solvable in time 2^{O(B\log B)}|\Sigma|^B(mn)^{O(1)}. The theorem not only extends the previous algorithmic results to a significantly more general model, it also implies algorithms for several other variants of Categorical Clustering with constraints on cluster sizes.

The elimination distance to some target graph property P is a general graph modification parameter introduced by Bulian and Dawar. We initiate the study of elimination distances to graph properties expressible in first-order logic. We delimit the problem's fixed-parameter tractability by identifying sufficient and necessary conditions on the structure of prefixes of first-order logic formulas. Our main result is the following meta-theorem: for every graph property P expressible by a first order-logic formula \phi\in \Sigma_3, that is, of the form \phi=\exists x_1\exists x_2\cdots \exists x_r \forall y_1\forall y_2\cdots \forall y_s \exists z_1\exists z_2\cdots \exists z_t \psi, where \psi is a quantifier-free first-order formula, checking whether the elimination distance of a graph to P does not exceed k, is fixed-parameter tractable parameterized by k. Properties of graphs expressible by formulas from \Sigma_3 include being of bounded degree, excluding a forbidden subgraph, or containing a bounded dominating set. We complement this theorem by showing that such a general statement does not hold for formulas with even slightly more expressive prefix structure: there are formulas \phi\in \Pi_3, for which computing elimination distance is W[2]-hard.

We introduce the rendezvous game with adversaries. In this game, two players, {\sl Facilitator} and {\sl Disruptor}, play against each other on a graph. Facilitator has two agents, and Disruptor has a team of $k$ agents located in some vertices of the graph. They take turns in moving their agents to adjacent vertices (or staying). Facilitator wins if his agents meet in some vertex of the graph. The goal of Disruptor is to prevent the rendezvous of Facilitator's agents. Our interest is to decide whether Facilitator can win. It appears that, in general, the problem is PSPACE-hard and, when parameterized by $k$, co-W[2]-hard. Moreover, even the game's variant where we ask whether Facilitator can ensure the meeting of his agents within $\tau$ steps is co-NP-complete already for $\tau=2$. On the other hand, for chordal and $P_5$-free graphs, we prove that the problem is solvable in polynomial time. These algorithms exploit an interesting relation of the game and minimum vertex cuts in certain graph classes. Finally, we show that the problem is fixed-parameter tractable parameterized by both the graph's neighborhood diversity and $\tau$.

We investigate the parameterized complexity of finding diverse sets of solutions to three fundamental combinatorial problems, two from the theory of matroids and the third from graph theory. The input to the Weighted Diverse Bases problem consists of a matroid $M$, a weight function $\omega:E(M)\to\mathbb{N}$, and integers $k\geq 1, d\geq 0$. The task is to decide if there is a collection of $k$ bases $B_{1}, \dotsc, B_{k}$ of $M$ such that the weight of the symmetric difference of any pair of these bases is at least $d$. This is a diverse variant of the classical matroid base packing problem. The input to the Weighted Diverse Common Independent Sets problem consists of two matroids $M_{1},M_{2}$ defined on the same ground set $E$, a weight function $\omega:E\to\mathbb{N}$, and integers $k\geq 1, d\geq 0$. The task is to decide if there is a collection of $k$ common independent sets $I_{1}, \dotsc, I_{k}$ of $M_{1}$ and $M_{2}$ such that the weight of the symmetric difference of any pair of these sets is at least $d$. This is motivated by the classical weighted matroid intersection problem. The input to the Diverse Perfect Matchings problem consists of a graph $G$ and integers $k\geq 1, d\geq 0$. The task is to decide if $G$ contains $k$ perfect matchings $M_{1},\dotsc,M_{k}$ such that the symmetric difference of any two of these matchings is at least $d$. We show that Weighted Diverse Bases and Weighted Diverse Common Independent Sets are both NP-hard, and derive fixed-parameter tractable (FPT) algorithms for all three problems with $(k,d)$ as the parameter.

An enumeration kernel as defined by Creignou et al. [Theory Comput. Syst. 2017] for a parameterized enumeration problem consists of an algorithm that transforms each instance into one whose size is bounded by the parameter plus a solution-lifting algorithm that efficiently enumerates all solutions from the set of the solutions of the kernel. We propose to consider two new versions of enumeration kernels by asking that the solutions of the original instance can be enumerated in polynomial time or with polynomial delay from the kernel solutions. Using the NP-hard Matching Cut problem parameterized by structural parameters such as the vertex cover number or the cyclomatic number of the input graph, we show that the new enumeration kernels present a useful notion of data reduction for enumeration problems which allows to compactly represent the set of feasible solutions.

This paper explores the behavior of present-biased agents, that is, agents who erroneously anticipate the costs of future actions compared to their real costs. Specifically, the paper extends the original framework proposed by Akerlof (1991) for studying various aspects of human behavior related to time-inconsistent planning, including procrastination, and abandonment, as well as the elegant graph-theoretic model encapsulating this framework recently proposed by Kleinberg and Oren (2014). The benefit of this extension is twofold. First, it enables to perform fine grained analysis of the behavior of present-biased agents depending on the optimisation task they have to perform. In particular, we study covering tasks vs. hitting tasks, and show that the ratio between the cost of the solutions computed by present-biased agents and the cost of the optimal solutions may differ significantly depending on the problem constraints. Second, our extension enables to study not only underestimation of future costs, coupled with minimization problems, but also all combinations of minimization/maximization, and underestimation/overestimation. We study the four scenarios, and we establish upper bounds on the cost ratio for three of them (the cost ratio for the original scenario was known to be unbounded), providing a complete global picture of the behavior of present-biased agents, as far as optimisation tasks are concerned.

Paths $P_1,\ldots,P_k$ in a graph $G=(V,E)$ are mutually induced if any two distinct $P_i$ and $P_j$ have neither common vertices nor adjacent vertices (except perhaps their end-vertices). The Induced Disjoint Paths problem is to decide if a graph $G$ with $k$ pairs of specified vertices $(s_i,t_i)$ contains $k$ mutually induced paths $P_i$ such that each $P_i$ connects $s_i$ and $t_i$. This is a classical graph problem that is NP-complete even for $k=2$. We study it for AT-free graphs. Unlike its subclasses of permutation graphs and cocomparability graphs, the class of AT-free graphs has no geometric intersection model. However, by a new, structural analysis of the behaviour of Induced Disjoint Paths for AT-free graphs, we prove that it can be solved in polynomial time for AT-free graphs even when $k$ is part of the input. This is in contrast to the situation for other well-known graph classes, such as planar graphs, claw-free graphs, or more recently, (theta,wheel)-free graphs, for which such a result only holds if $k$ is fixed. As a consequence of our main result, the problem of deciding if a given AT-free graph contains a fixed graph $H$ as an induced topological minor admits a polynomial-time algorithm. In addition, we show that such an algorithm is essentially optimal by proving that the problem is W[1]-hard with parameter $|V_H|$, even on a subclass of AT-free graph, namely cobipartite graphs. We also show that the problems $k$-in-a-Path and $k$-in-a-Tree are polynomial-time solvable on AT-free graphs even if $k$ is part of the input. These problems are to test if a graph has an induced path or induced tree, respectively, spanning $k$ given vertices., Comment: An extended abstract of this paper appeared in the proceedings of SWAT 2012

We investigate the parameterized complexity of the recognition problem for the proper $H$-graphs. The $H$-graphs are the intersection graphs of connected subgraphs of a subdivision of a multigraph $H$, and the properness means that the containment relationship between the representations of the vertices is forbidden. The class of $H$-graphs was introduced as a natural (parameterized) generalization of interval and circular-arc graphs by Bir\'o, Hujter, and Tuza in 1992, and the proper $H$-graphs were introduced by Chaplick et al. in WADS 2019 as a generalization of proper interval and circular-arc graphs. For these graph classes, $H$ may be seen as a structural parameter reflecting the distance of a graph to a (proper) interval graph, and as such gained attention as a structural parameter in the design of efficient algorithms. We show the following results. - For a tree $T$ with $t$ nodes, it can be decided in $ 2^{\mathcal{O}(t^2 \log t)} \cdot n^3 $ time, whether an $n$-vertex graph $ G $ is a proper $ T $-graph. For yes-instances, our algorithm outputs a proper $T$-representation. This proves that the recognition problem for proper $H$-graphs, where $H$ required to be a tree, is fixed-parameter tractable when parameterized by the size of $T$. Previously only NP-completeness was known. - Contrasting to the first result, we prove that if $H$ is not constrained to be a tree, then the recognition problem becomes much harder. Namely, we show that there is a multigraph $H$ with 4 vertices and 5 edges such that it is NP-complete to decide whether $G$ is a proper $H$-graph.

In 1952, Dirac proved the following theorem about long cycles in graphs with large minimum vertex degrees: Every $n$-vertex $2$-connected graph $G$ with minimum vertex degree $\delta\geq 2$ contains a cycle with at least $\min\{2\delta,n\}$ vertices. In particular, if $\delta\geq n/2$, then $G$ is Hamiltonian. The proof of Dirac's theorem is constructive, and it yields an algorithm computing the corresponding cycle in polynomial time. The combinatorial bound of Dirac's theorem is tight in the following sense. There are 2-connected graphs that do not contain cycles of length more than $2\delta+1$. Also, there are non-Hamiltonian graphs with all vertices but one of degree at least $n/2$. This prompts naturally to the following algorithmic questions. For $k\geq 1$, (A) How difficult is to decide whether a 2-connected graph contains a cycle of length at least $\min\{2\delta+k,n\}$? (B) How difficult is to decide whether a graph $G$ is Hamiltonian, when at least $n - k$ vertices of $G$ are of degrees at least $n/2-k$? The first question was asked by Fomin, Golovach, Lokshtanov, Panolan, Saurabh, and Zehavi. The second question is due to Jansen, Kozma, and Nederlof. Even for a very special case of $k=1$, the existence of a polynomial-time algorithm deciding whether $G$ contains a cycle of length at least $\min\{2\delta+1,n\}$ was open. We resolve both questions by proving the following algorithmic generalization of Dirac's theorem: If all but $k$ vertices of a $2$-connected graph $G$ are of degree at least $\delta$, then deciding whether $G$ has a cycle of length at least $\min\{2\delta +k, n\}$ can be done in time $2^{\mathcal{O}(k)}\cdot n^{\mathcal{O}(1)}$. The proof of the algorithmic generalization of Dirac's theorem builds on new graph-theoretical results that are interesting on their own., Comment: Appeared at SODA 2022. Major changes from the first version: Lemma 20 strengthened; open questions list reduced

We consider a generalization of the fundamental $k$-means clustering for data with incomplete or corrupted entries. When data objects are represented by points in $\mathbb{R}^d$, a data point is said to be incomplete when some of its entries are missing or unspecified. An incomplete data point with at most $\Delta$ unspecified entries corresponds to an axis-parallel affine subspace of dimension at most $\Delta$, called a $\Delta$-point. Thus we seek a partition of $n$ input $\Delta$-points into $k$ clusters minimizing the $k$-means objective. For $\Delta=0$, when all coordinates of each point are specified, this is the usual $k$-means clustering. We give an algorithm that finds an $(1+ \epsilon)$-approximate solution in time $f(k,\epsilon, \Delta) \cdot n^2 \cdot d$ for some function $f$ of $k,\epsilon$, and $\Delta$ only., Comment: To be published in Symposium on Discrete Algorithms (SODA) 2021

Given a graph class $\mathcal{H}$, the task of the $\mathcal{H}$-Square Root problem is to decide, whether an input graph $G$ has a square root $H$ from $\mathcal{H}$. We are interested in the parameterized complexity of the problem for classes $\mathcal{H}$ that are composed by the graphs at vertex deletion distance at most $k$ from graphs of maximum degree at most one, that is, we are looking for a square root $H$ such that there is a modulator $S$ of size $k$ such that $H-S$ is the disjoint union of isolated vertices and disjoint edges. We show that different variants of the problems with constraints on the number of isolated vertices and edges in $H-S$ are FPT when parameterized by $k$ by demonstrating algorithms with running time $2^{2^{O(k)}}\cdot n^{O(1)}$. We further show that the running time of our algorithms is asymptotically optimal and it is unlikely that the double-exponential dependence on $k$ could be avoided. In particular, we prove that the VC-$k$ Root problem, that asks whether an input graph has a square root with vertex cover of size at most $k$, cannot be solved in time $2^{2^{o(k)}}\cdot n^{O(1)}$ unless Exponential Time Hypothesis fails. Moreover, we point out that VC-$k$ Root parameterized by $k$ does not admit a subexponential kernel unless $P=NP$.

We initiate the study of the Diverse Pair of (Maximum/ Perfect) Matchings problems which given a graph $G$ and an integer $k$, ask whether $G$ has two (maximum/perfect) matchings whose symmetric difference is at least $k$. Diverse Pair of Matchings (asking for two not necessarily maximum or perfect matchings) is NP-complete on general graphs if $k$ is part of the input, and we consider two restricted variants. First, we show that on bipartite graphs, the problem is polynomial-time solvable, and second we show that Diverse Pair of Maximum Matchings is FPT parameterized by $k$. We round off the work by showing that Diverse Pair of Matchings has a kernel on $\mathcal{O}(k^2)$ vertices., Comment: To appear at ISAAC 2020

A fundamental theorem of Whitney from 1933 asserts that 2-connected graphs G and H are 2-isomorphic, or equivalently, their cycle matroids are isomorphic, if and only if G can be transformed into H by a series of operations called Whitney switches. In this paper we consider the quantitative question arising from Whitney's theorem: Given two 2-isomorphic graphs, can we transform one into another by applying at most k Whitney switches? This problem is already NP-complete for cycles, and we investigate its parameterized complexity. We show that the problem admits a kernel of size O(k), and thus, is fixed-parameter tractable when parameterized by k., Comment: To appear at ESA 2020

We study the algorithmic properties of the graph class Chordal-ke, that is, graphs that can be turned into a chordal graph by adding at most k edges or, equivalently, the class of graphs of fill-in at most k. We discover that a number of fundamental intractable optimization problems being parameterized by k admit subexponential algorithms on graphs from Chordal-ke. We identify a large class of optimization problems on Chordal-ke that admit algorithms with the typical running time 2^{O(\sqrt{k}\log k)}\cdot n^{O(1)}. Examples of the problems from this class are finding an independent set of maximum weight, finding a feedback vertex set or an odd cycle transversal of minimum weight, or the problem of finding a maximum induced planar subgraph. On the other hand, we show that for some fundamental optimization problems, like finding an optimal graph coloring or finding a maximum clique, are FPT on Chordal-ke when parameterized by k but do not admit subexponential in k algorithms unless ETH fails. Besides subexponential time algorithms, the class of Chordal-ke graphs appears to be appealing from the perspective of kernelization (with parameter k). While it is possible to show that most of the weighted variants of optimization problems do not admit polynomial in k kernels on Chordal-ke graphs, this does not exclude the existence of Turing kernelization and kernelization for unweighted graphs. In particular, we construct a polynomial Turing kernel for Weighted Clique on Chordal-ke graphs. For (unweighted) Independent Set we design polynomial kernels on two interesting subclasses of Chordal-ke, namely, Interval-ke and Split-ke graphs., Comment: This is the full version of the paper accepted for ESA 2020

The survey provides an overview of the developing area of parameterized algorithms for graph modification problems. We concentrate on edge modification problems, where the task is to change a small number of adjacencies in a graph in order to satisfy some required property., Comment: Incorporated comments from Marcin Pilipczuk, William Lochet, and Dekel Tsur