34 results on '"Garcia, Kimberly"'
Search Results
2. Gaze-enabled activity recognition for augmented reality feedback
- Author
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Bektaş, Kenan, Strecker, Jannis, Mayer, Simon, and Garcia, Kimberly
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- 2024
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3. Authentic, Relevant, and Rigorous Literacy Practices for Culturally and Linguistically Diverse Newcomer Classrooms
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Garcia, Kimberly D.
- Abstract
Teachers routinely report that they feel pressured to teach to standardized assessments. Narrowing the curriculum may help students succeed on standardized assessments, but it rarely leads to long-lasting academic success. Authentic, relevant, and rigorous instruction in newcomer English learner (EL) classrooms, however, can create long-term learners while assisting students in mastering standardized exams. It is critical that adolescent ELs are academically challenged because they are in a race against time to master content and assessments in order to graduate. This article provides research-based activities and ideas to facilitate learning in linguistically and culturally diverse adolescent EL classrooms.
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- 2019
4. Synthesis and in vitro anticancer studies of arene ruthenium(II) and arene osmium(II) complexes bearing arsine and stibine co-ligands on breast cancer cell-lines
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Latiş, Stefan, Marschner, Christoph, Baumgartner, Judith, Prince, Sharon, Biswas, Supratim, Chakraborty, Suparna, Garcia, Kimberly G., Heeren, Ron M.A., Van Nuffel, Sebastiaan, and Blom, Burgert
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- 2023
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5. Fast mass spectrometry imaging for immunohistochemistry
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Shamraeva Mariya, Sandström Edith, Garcia Kimberly G., Heeren Ron M. A., Anthony Ian G. M., and van Nuffel Sebastiaan
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mass spectrometry imaging ,mass microscopy ,Microbiology ,QR1-502 ,Physiology ,QP1-981 ,Zoology ,QL1-991 - Published
- 2024
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6. Semantic Knowledge for Autonomous Smart Farming
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Ramanathan, Ganesh, Vachtsevanou, Danai, García, Kimberly, Lemée, Jérémy, Burattini, Samuele, Bektaş, Kenan, and Mayer, Simon
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- 2022
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7. Pretest-post-test evaluation with lay midwives in remote Guatemala after educational activities about COVID-19.
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Garcia, Kimberly S., Rodriguez, Argelia, Gonzalez, Zoila, Armstrong, Cheryl, Iacob, Eli, Flynn, Emily E., and Simmons, Molly
- Abstract
Introduction: Guatemalan lay midwives are well-respected community leaders in a country that lacks the institutional capacity to meet healthcare needs related to pregnancy, newborns, and COVID-19. Thus, Guatemalan lay midwives, who attend the majority of births in their country and who attend most births at home, are in an optimal position to offer frontline support to pregnant women and newborns regarding the global pandemic. The primary objective of this program of study was to dispel myths about COVID-19 and to provide culturally relevant educational activities to low-literacy Guatemalan lay midwives about issues related to the virus, such as signs and symptoms, risks to the mother and fetus, which patients are most vulnerable, appropriate responses, benefits and side-effects of the vaccine, timing of the vaccine, how the virus interacts with breastfeeding, and breastfeeding recommendations. Methods: In a partnership among the Guatemalan Ministry of Health, expert faculty at the University of Utah College of Nursing, and Madre y Niño, a non-profit organization from the US, evidence-based educational activities about COVID-19 were offered orally in the native language of participants. Two hundred and ten lay midwives attended educational sessions at 11 locations throughout the remote Peten department. Educational activities included repetition, storytelling, and role plays. A pretest--post-test evaluation of 10 questions with 24 correct answers was used to determine if the educational activities changed lay midwife knowledge about COVID-19. Participants were given essential birth supplies and laminated COVID Reminder Cards, which were designed to increase visual literacy, to encourage knowledge retention after the educational sessions. Results: Participants showed a significant increase in knowledge scores (possible 0-24) from prescores 7.09 (standard deviation (SD)=3.06) to 15.20 (SD=4.61), Student's t-test p<0.001. In addition, a significantly higher proportion of participants mistakenly thought COVID-19 passed through breast milk on the pretest (70.1%) compared to post-test (8.4%) (McNemar test, p<0.001). Regarding breastfeeding, 12.6% of participants knew on the pretest that women with COVID-19 who breastfeed should wear a mask and wash their hands compared to 74.3% of participants who knew these recommendations on the post-test (Wilcoxon signed-rank test, p<0.001). Finally, 2% of participants knew on the pretest that pregnant women with COVID-19 should take a low-dose aspirin compared to 67% of participants on the post-test (χ² (1)=194.7, p<0.001). Conclusion: These essential primary care providers misunderstood many critical issues related to COVID-19, pregnancy, and newborns. Culturally relevant educational activities provided orally in the native language of participants dispelled myths about the virus and significantly improved lay midwife knowledge. Providing evidence-based educational activities in a culturally relevant format is critical to protecting remote, vulnerable populations, such as pregnant Guatemalan women and newborns, during a global pandemic. [ABSTRACT FROM AUTHOR]
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- 2024
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8. Model visualization: Combining context-based graph and tree representations
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García, Kimberly and Brézillon, Patrick
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- 2018
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9. Delivering Acupuncture Therapy in an Interdisciplinary Global Health Setting in Guatemala: Pilot Study and Lessons Learned
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Taylor-Swanson, Lisa J., primary, Tu, Wen, additional, Howell, Caroline Sariah, additional, Dillard, Melinda Pride, additional, Bell, Lisa, additional, Nelson, Ashlee Taft, additional, Geppelt, Cinnamon, additional, Boccino, Joan Maria, additional, Taylor, Elizabeth, additional, Alvarez, Gabriela, additional, Citkovitz, Claudia, additional, Johnson, Kimberly, additional, and Garcia, Kimberly, additional
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- 2023
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10. Internalización de las normas laborales internacionales en el marco del tlcan: el caso mexicano
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Nolan García, Kimberly A.
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- 2014
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11. A right to repair privacy-invasive services: Is a new, more holistic European approach emerging?
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Zihlmann, Zaira, Garcia, Kimberly, Mayer, Simon, and Tamò-Larrieux, Aurelia
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ComputingMilieux_MISCELLANEOUS - Abstract
Zaira Zihlmann, Kimberly Garcia, Simon Mayer, Aurelia Tamò-Larrieux (2022): A right to repair privacy-invasive services: Is a new, more holistic European approach emerging?In: Proceedings of the International Conference on Privacy-Friendly and Trustworthy Technology for Society – COST Action CA19121 - Network on Privacy-Aware Audio- and Video-Based Applications for Active and Assisted Living
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- 2022
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12. Determining and locating the closest available resources to mobile collaborators
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García, Kimberly, Mendoza, Sonia, Decouchant, Dominique, Rodríguez, José, and Pérez, Tanibet
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- 2013
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13. Immunopathology of Glioblastoma Multiforme and its importance on clinic field
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Torres Rodríguez, María Paula, Murcia Garcia, Kimberly Andrea, Infante Cruz, Alejandra del Pilar, and Cruz Baquero, Claudia Andrea
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Treatment ,Tumor microenvironment ,Immunoscore ,Pronóstico ,Tratamiento ,Prognosis ,Glioblastoma Multiforme ,microambiente Tumoral - Published
- 2022
14. Transnational Advocates and Labor Rights Enforcement in the North American Free Trade Agreement
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García, Kimberly A. Nolan
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- 2011
15. Draft Genome Sequence of Medusavirus Stheno, Isolated from the Tatakai River of Uji, Japan
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80795055, 70291432, Yoshida, Koki, Zhang, Ruixuan, Garcia, Kimberly G., Endo, Hisashi, Gotoh, Yasuhiro, Hayashi, Tetsuya, Takemura, Masaharu, Ogata, Hiroyuki, 80795055, 70291432, Yoshida, Koki, Zhang, Ruixuan, Garcia, Kimberly G., Endo, Hisashi, Gotoh, Yasuhiro, Hayashi, Tetsuya, Takemura, Masaharu, and Ogata, Hiroyuki
- Abstract
“Medusaviridae” is a proposed family of large double-stranded DNA (dsDNA) viruses so far represented by a sole virus isolated from a hot spring. In the present study, we report the isolation and genome sequencing of a second member of this family, medusavirus stheno, discovered from a freshwater sample with an Acanthamoeba castellanii coculture.
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- 2021
16. Zika virus evolution and spread in the Americas
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Metsky, Hayden C., Matranga, Christian B., Wohl, Shirlee, Schaffner, Stephen F., Freije, Catherine A., Winnicki, Sarah M., West, Kendra, Qu, James, Baniecki, Mary Lynn, Gladden-Young, Adrianne, Lin, Aaron E., Tomkins-Tinch, Christopher H., Ye, Simon H., Park, Daniel J., Luo, Cynthia Y., Barnes, Kayla G., Shah, Rickey R., Chak, Bridget, Barbosa-Lima, Giselle, Delatorre, Edson, Vieira, Yasmine R., Paul, Lauren M., Tan, Amanda L., Barcellona, Carolyn M., Porcelli, Mario C., Vasquez, Chalmers, Cannons, Andrew C., Cone, Marshall R., Hogan, Kelly N., Kopp, Edgar W., Anzinger, Joshua J., Garcia, Kimberly F., Parham, Leda A., Ramrez, Rosa M. Glvez, Montoya, Maria C. Miranda, Rojas, Diana P., Brown, Catherine M., Hennigan, Scott, Sabina, Brandon, Scotland, Sarah, Gangavarapu, Karthik, Grubaugh, Nathan D., Oliveira, Glenn, Robles-Sikisaka, Refugio, Rambaut, Andrew, Gehrke, Lee, Smole, Sandra, Halloran, M. Elizabeth, Villar, Luis, Mattar, Salim, Lorenzana, Ivette, Cerbino-Neto, Jose, Valim, Clarissa, Degrave, Wim, Bozza, Patricia T., Gnirke, Andreas, Andersen, Kristian G., Isern, Sharon, Michael, Scott F., Bozza, Fernando A., Souza, Thiago M. L., Bosch, Irene, Yozwiak, Nathan L., MacInnis, Bronwyn L., and Sabeti, Pardis C.
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America -- Health aspects ,Zika virus -- Natural history ,Zika virus infection -- Distribution ,Company distribution practices ,Environmental issues ,Science and technology ,Zoology and wildlife conservation - Abstract
Author(s): Hayden C. Metsky [1, 2]; Christian B. Matranga [1]; Shirlee Wohl [1, 3]; Stephen F. Schaffner [1, 3, 4]; Catherine A. Freije [1, 3]; Sarah M. Winnicki [1]; Kendra [...]
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- 2017
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17. Field-deployable viral diagnostics using CRISPR-Cas13
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McGovern Institute for Brain Research at MIT, Massachusetts Institute of Technology. Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology. Department of Biological Engineering, Harvard University--MIT Division of Health Sciences and Technology, Massachusetts Institute of Technology. Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology. Institute for Medical Engineering & Science, Myhrvold, Cameron, Freije, Catherine A., Gootenberg, Jonathan S, Abudayyeh, Omar O., Metsky, Hayden C., Durbin, Ann F, Kellner, Max J., Tan, Amanda L., Paul, Lauren M., Parham, Leda A., Garcia, Kimberly F., Barnes, Kayla G., Chak, Bridget, Mondini, Adriano, Nogueira, Mauricio L., Isern, Sharon, Michael, Scott F., Lorenzana, Ivette, Yozwiak, Nathan L., MacInnis, Bronwyn L., Bosch, Irene, Gehrke, Lee, Zhang, Feng, Sabeti, Pardis C., McGovern Institute for Brain Research at MIT, Massachusetts Institute of Technology. Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology. Department of Biological Engineering, Harvard University--MIT Division of Health Sciences and Technology, Massachusetts Institute of Technology. Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology. Institute for Medical Engineering & Science, Myhrvold, Cameron, Freije, Catherine A., Gootenberg, Jonathan S, Abudayyeh, Omar O., Metsky, Hayden C., Durbin, Ann F, Kellner, Max J., Tan, Amanda L., Paul, Lauren M., Parham, Leda A., Garcia, Kimberly F., Barnes, Kayla G., Chak, Bridget, Mondini, Adriano, Nogueira, Mauricio L., Isern, Sharon, Michael, Scott F., Lorenzana, Ivette, Yozwiak, Nathan L., MacInnis, Bronwyn L., Bosch, Irene, Gehrke, Lee, Zhang, Feng, and Sabeti, Pardis C.
- Abstract
Mitigating global infectious disease requires diagnostic tools that are sensitive, specific, and rapidly field deployable. In this study, we demonstrate that the Cas13-based SHERLOCK (specific high-sensitivity enzymatic reporter unlocking) platform can detect Zika virus (ZIKV) and dengue virus (DENV) in patient samples at concentrations as low as 1 copy per microliter. We developed HUDSON (heating unextracted diagnostic samples to obliterate nucleases), a protocol that pairs with SHERLOCK for viral detection directly from bodily fluids, enabling instrument-free DENV detection directly from patient samples in <2 hours. We further demonstrate that SHERLOCK can distinguish the four DENV serotypes, as well as region-specific strains of ZIKV from the 2015–2016 pandemic. Finally, we report the rapid (<1 week) design and testing of instrument-free assays to detect clinically relevant viral single-nucleotide polymorphisms., NIH (Grants AI-100190, 1R01-HG009761, 1R01-MH110049, and 1DP1-HL141201)
- Published
- 2020
18. Draft Genome Sequence of Medusavirus Stheno, Isolated from the Tatakai River of Uji, Japan
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Yoshida, Koki, primary, Zhang, Ruixuan, additional, Garcia, Kimberly G., additional, Endo, Hisashi, additional, Gotoh, Yasuhiro, additional, Hayashi, Tetsuya, additional, Takemura, Masaharu, additional, and Ogata, Hiroyuki, additional
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- 2021
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19. Efficient genome editing by CRISPR-Mb3Cas12a in mice
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Wang, Zhuqing, primary, Wang, Yue, additional, Wang, Shawn, additional, Gorzalski, Andrew J., additional, McSwiggin, Hayden, additional, Yu, Tian, additional, Castaneda-Garcia, Kimberly, additional, Prince, Brian, additional, Wang, Hetan, additional, Zheng, Huili, additional, and Yan, Wei, additional
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- 2020
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20. Capturing sequence diversity in metagenomes with comprehensive and scalable probe design
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Metsky, Hayden C, Siddle, Katherine J, Gladden-Young, Adrianne, Qu, James, Yang, David K, Brehio, Patrick, Goldfarb, Andrew, Piantadosi, Anne, Wohl, Shirlee, Carter, Amber, Lin, Aaron E, Barnes, Kayla G, Tully, Damien C, Corleis, Bjӧrn, Hennigan, Scott, Barbosa-Lima, Giselle, Vieira, Yasmine R, Paul, Lauren M, Tan, Amanda L, Garcia, Kimberly F, Parham, Leda A, Odia, Ikponmwosa, Eromon, Philomena, Folarin, Onikepe A, Goba, Augustine, Viral Hemorrhagic Fever Consortium, Simon-Lorière, Etienne, Hensley, Lisa, Balmaseda, Angel, Harris, Eva, Kwon, Douglas S, Allen, Todd M, Runstadler, Jonathan A, Smole, Sandra, Bozza, Fernando A, Souza, Thiago ML, Isern, Sharon, Michael, Scott F, Lorenzana, Ivette, Gehrke, Lee, Bosch, Irene, Ebel, Gregory, Grant, Donald S, Happi, Christian T, Park, Daniel J, Gnirke, Andreas, Sabeti, Pardis C, and Matranga, Christian B
- Abstract
Metagenomic sequencing has the potential to transform microbial detection and characterization, but new tools are needed to improve its sensitivity. Here we present CATCH, a computational method to enhance nucleic acid capture for enrichment of diverse microbial taxa. CATCH designs optimal probe sets, with a specified number of oligonucleotides, that achieve full coverage of, and scale well with, known sequence diversity. We focus on applying CATCH to capture viral genomes in complex metagenomic samples. We design, synthesize, and validate multiple probe sets, including one that targets the whole genomes of the 356 viral species known to infect humans. Capture with these probe sets enriches unique viral content on average 18-fold, allowing us to assemble genomes that could not be recovered without enrichment, and accurately preserves within-sample diversity. We also use these probe sets to recover genomes from the 2018 Lassa fever outbreak in Nigeria and to improve detection of uncharacterized viral infections in human and mosquito samples. The results demonstrate that CATCH enables more sensitive and cost-effective metagenomic sequencing.
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- 2019
21. The landscape of knowledge translation interventions in cancer control: What do we know and where to next? A review of systematic reviews
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Brouwers Melissa C, Garcia Kimberly, Makarski Julie, and Daraz Lubna
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Medicine (General) ,R5-920 - Abstract
Abstract Background Effective implementation strategies are needed to optimize advancements in the fields of cancer diagnosis, treatment, survivorship, and end-of-life care. We conducted a review of systematic reviews to better understand the evidentiary base of implementation strategies in cancer control. Methods Using three databases, we conducted a search and identified English-language systematic reviews published between 2005 and 2010 that targeted consumer, professional, organizational, regulatory, or financial interventions, tested exclusively or partially in a cancer context (primary focus); generic or non-cancer-specific reviews were also considered. Data were extracted, appraised, and analyzed by members of the research team, and research ideas to advance the field were proposed. Results Thirty-four systematic reviews providing 41 summaries of evidence on 19 unique interventions comprised the evidence base. AMSTAR quality ratings ranged between 2 and 10. Team members rated most of the interventions as promising and in need of further research, and 64 research ideas were identified. Conclusions While many interventions show promise of effectiveness in the cancer-control context, few reviews were able to conclude definitively in favor of or against a specific intervention. We discuss the complexity of implementation research and offer suggestions to advance the science in this area.
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- 2011
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22. Ex-ante Study of a Possible Modernisation of the EU-Chile Association Agreement
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Henry de Frahan, Bruno, Hartwell, Christopher, Kuik, Onno, Lirette, Paul, Mirecka, Katarzyna, Nolan Garcia, Kimberly A., Pellandra, Andrea, Polanco, Rodrigo, Schmidt-Hebbel, Klaus, Shuvaieva, Iryna, Sidło, Katarzyna, Teresiński, Jan, Torrent, Ramon, Valdes, Alberto, Environmental Economics, and UCL - SST/ELI/ELIA - Agronomy
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SDG 17 - Partnerships for the Goals - Abstract
This study provides an ex-ante impact assessment of the possible modernisation of the EU-Chile Association Agreement. Since the current Agreement entered into force in 2003, Chilean exports of agricultural/food products and services to the EU have nearly tripled while EU exports to Chile have doubled in most sub-sectors. Going forward, simulation results provided by the European Commission shows potential growth in bilateral exports with the EU, especially for goods belonging to manufacturing sub-sectors, with modest positive effects on the macroeconomic variables in both partners. This includes increased opportunities for small and medium sized enterprises and general consumer welfare gains. Trade redistribution may also occur among the main trading partners of the EU and Chile. Furthermore, there are decided advantages to a single EU-wide comprehensive investment chapter to facilitate foreign direct investment flows, while gains from easing market access and regulatory barriers to public procurement in both Chile and the EU are more muted. Overall, limited environmental, employment and labour market impacts are expected in both partners. However, potential exists for reinforcing labour standards in Chile and increased environmental cooperation through a modernised Agreement. The net impact of increased trade on human rights is unclear but likely to be marginal.
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- 2017
23. Ex-ante Study of a Possible Modernisation of the EU-Chile Association Agreement
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UCL - SST/ELI/ELIA - Agronomy, Henry de Frahan, Bruno, Hartwell, Christopher, Kuik, Onno, Lirette, Paul, Mirecka, Katarzyna, Nolan Garcia, Kimberly A., Pellandra, Andrea, Polanco, Rodrigo, Schmidt-Hebbel, Klaus, Shuvaieva, Iryna, Sidło, Katarzyna, Teresiński, Jan, Torrent, Ramon, Valdes, Alberto, UCL - SST/ELI/ELIA - Agronomy, Henry de Frahan, Bruno, Hartwell, Christopher, Kuik, Onno, Lirette, Paul, Mirecka, Katarzyna, Nolan Garcia, Kimberly A., Pellandra, Andrea, Polanco, Rodrigo, Schmidt-Hebbel, Klaus, Shuvaieva, Iryna, Sidło, Katarzyna, Teresiński, Jan, Torrent, Ramon, and Valdes, Alberto
- Abstract
This study provides an ex-ante impact assessment of the possible modernisation of the EU-Chile Association Agreement. Since the current Agreement entered into force in 2003, Chilean exports of agricultural/food products and services to the EU have nearly tripled while EU exports to Chile have doubled in most sub-sectors. Going forward, simulation results provided by the European Commission shows potential growth in bilateral exports with the EU, especially for goods belonging to manufacturing sub-sectors, with modest positive effects on the macroeconomic variables in both partners. This includes increased opportunities for small and medium sized enterprises and general consumer welfare gains. Trade redistribution may also occur among the main trading partners of the EU and Chile. Furthermore, there are decided advantages to a single EU-wide comprehensive investment chapter to facilitate foreign direct investment flows, while gains from easing market access and regulatory barriers to public procurement in both Chile and the EU are more muted. Overall, limited environmental, employment and labour market impacts are expected in both partners. However, potential exists for reinforcing labour standards in Chile and increased environmental cooperation through a modernised Agreement. The net impact of increased trade on human rights is unclear but likely to be marginal.
- Published
- 2017
24. Zika virus evolution and spread in the Americas
- Author
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Institute for Medical Engineering and Science, Broad Institute of MIT and Harvard, Harvard University--MIT Division of Health Sciences and Technology, Massachusetts Institute of Technology. Department of Electrical Engineering and Computer Science, Metsky, Hayden C., Schaffner, Stephen F, Quigley, James Edwin, Ye, Simon Huang, Park, Daniel, Barnes, Kayla, Gehrke, Lee, Valim, Clarissa, Gnirke, Andreas, Andersen, Kristian, Bosch, Irene, Matranga, Christian B., Wohl, Shirlee, Freije, Catherine A., Winnicki, Sarah M., West, Kendra, Baniecki, Mary Lynn, Gladden-Young, Adrianne, Lin, Aaron E., Tomkins-Tinch, Christopher H., Luo, Cynthia Y., Shah, Rickey R., Chak, Bridget, Barbosa-Lima, Giselle, Delatorre, Edson, Vieira, Yasmine R., Paul, Lauren M., Tan, Amanda L., Barcellona, Carolyn M., Porcelli, Mario C., Vasquez, Chalmers, Cannons, Andrew C., Cone, Marshall R., Hogan, Kelly N., Kopp, Edgar W., Anzinger, Joshua J., Garcia, Kimberly F., Parham, Leda A., Ramírez, Rosa M. Gélvez, Montoya, Maria C. Miranda, Rojas, Diana P., Brown, Catherine M., Hennigan, Scott, Sabina, Brandon, Scotland, Sarah, Gangavarapu, Karthik, Grubaugh, Nathan D., Oliveira, Glenn, Robles-Sikisaka, Refugio, Rambaut, Andrew, Smole, Sandra, Halloran, M. Elizabeth, Villar, Luis, Mattar, Salim, Lorenzana, Ivette, Cerbino-Neto, Jose, Degrave, Wim, Bozza, Patricia T., Isern, Sharon, Michael, Scott F., Bozza, Fernando A., Souza, Thiago M. L., Yozwiak, Nathan L., MacInnis, Bronwyn L., Sabeti, Pardis C., Institute for Medical Engineering and Science, Broad Institute of MIT and Harvard, Harvard University--MIT Division of Health Sciences and Technology, Massachusetts Institute of Technology. Department of Electrical Engineering and Computer Science, Metsky, Hayden C., Schaffner, Stephen F, Quigley, James Edwin, Ye, Simon Huang, Park, Daniel, Barnes, Kayla, Gehrke, Lee, Valim, Clarissa, Gnirke, Andreas, Andersen, Kristian, Bosch, Irene, Matranga, Christian B., Wohl, Shirlee, Freije, Catherine A., Winnicki, Sarah M., West, Kendra, Baniecki, Mary Lynn, Gladden-Young, Adrianne, Lin, Aaron E., Tomkins-Tinch, Christopher H., Luo, Cynthia Y., Shah, Rickey R., Chak, Bridget, Barbosa-Lima, Giselle, Delatorre, Edson, Vieira, Yasmine R., Paul, Lauren M., Tan, Amanda L., Barcellona, Carolyn M., Porcelli, Mario C., Vasquez, Chalmers, Cannons, Andrew C., Cone, Marshall R., Hogan, Kelly N., Kopp, Edgar W., Anzinger, Joshua J., Garcia, Kimberly F., Parham, Leda A., Ramírez, Rosa M. Gélvez, Montoya, Maria C. Miranda, Rojas, Diana P., Brown, Catherine M., Hennigan, Scott, Sabina, Brandon, Scotland, Sarah, Gangavarapu, Karthik, Grubaugh, Nathan D., Oliveira, Glenn, Robles-Sikisaka, Refugio, Rambaut, Andrew, Smole, Sandra, Halloran, M. Elizabeth, Villar, Luis, Mattar, Salim, Lorenzana, Ivette, Cerbino-Neto, Jose, Degrave, Wim, Bozza, Patricia T., Isern, Sharon, Michael, Scott F., Bozza, Fernando A., Souza, Thiago M. L., Yozwiak, Nathan L., MacInnis, Bronwyn L., and Sabeti, Pardis C.
- Abstract
Although the recent Zika virus (ZIKV) epidemic in the Americas and its link to birth defects have attracted a great deal of attention1,2, much remains unknown about ZIKV disease epidemiology and ZIKV evolution, in part owing to a lack of genomic data. Here we address this gap in knowledge by using multiple sequencing approaches to generate 110 ZIKV genomes from clinical and mosquito samples from 10 countries and territories, greatly expanding the observed viral genetic diversity from this outbreak. We analysed the timing and patterns of introductions into distinct geographic regions; our phylogenetic evidence suggests rapid expansion of the outbreak in Brazil and multiple introductions of outbreak strains into Puerto Rico, Honduras, Colombia, other Caribbean islands, and the continental United States. We find that ZIKV circulated undetected in multiple regions for many months before the first locally transmitted cases were confirmed, highlighting the importance of surveillance of viral infections. We identify mutations with possible functional implications for ZIKV biology and pathogenesis, as well as those that might be relevant to the effectiveness of diagnostic tests., National Institutes of Health (U.S.) (Grant NIAID U19AI110818)
- Published
- 2017
25. Semantic Development and Integration of Standards for Adoption and Interoperability
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Hodges, Jack, primary, Garcia, Kimberly, additional, and Ray, Steven, additional
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- 2017
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26. A mixed methods approach to understand variation in lung cancer practice and the role of guidelines
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Brouwers, Melissa C, primary, Makarski, Julie, additional, Garcia, Kimberly, additional, Akram, Saira, additional, Darling, Gail E, additional, Ellis, Peter M, additional, Evans, William K, additional, Giacomini, Mita, additional, Martelli-Reid, Lorraine, additional, and Ung, Yee C, additional
- Published
- 2014
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27. Transnational Advocacy and Labor Rights Conditionality in the International Trading Order
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Peceny, Mark, Roberts, Kenneth M., Schrank, Andrew, Hochstetler, Kathryn, Nolan Garcia, Kimberly, Peceny, Mark, Roberts, Kenneth M., Schrank, Andrew, Hochstetler, Kathryn, and Nolan Garcia, Kimberly
- Subjects
- Foreign trade and employment--Mexico
- Abstract
This dissertation examines whether the incorporation of labor rights provisions into trade agreements promotes labor rights enforcement in developing countries. It draws on the international relations literature on transnational advocacy as the starting point to ask how labors allies engage the trade mechanisms as potential tools for promoting labor rights in supranational arenas. Using original data, field observation, primary documents and interviews with key participants, I examine how transnational labor rights advocates have engaged these institutions through a research design that pairs quantitative analysis of the NAFTA labor side agreement, with qualitative examination of a number of the NAFTA cases and a set of labor violations cases in Puebla, Mexico. The empirical chapters discuss the ways that transnational labor rights advocates engage the labor rights enforcement mechanism as they attempt to secure a review of their petitions from the quasi-judicial bodies charged with investigating labor rights compliance. Transnational support has led to outcomes for labor that include firm-level redress of labor rights violations and institutional changes within Mexico. The implication for this work is that where labor clauses have had an effect on labor rights practices within states, it has been at the intersection of transnational civil society and international institutions. The research suggests that the process of engaging the petitions mechanism can persuade or coerce states into enforcing labor rights commitments, and emphasizes that transnational advocacy provides a crucial element to realizing labor rights enforcement where domestic efforts are weak.
- Published
- 2010
28. NAFTA and the Politics of Labor Transnationalism, by TamaraKay. Cambridge University Press, Cambridge, 2011, 310 pp., ISBN: 978 0 521 132954, £19.99 (US$29.99), paperback; ISBN: 987 0 521 76287 8, £55.00 (US$90.00), hardback.
- Author
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Garcia, Kimberly A. Nolan, primary
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- 2012
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29. Efficient genome editing by CRISPR-Mb3Cas12a in mice.
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Zhuqing Wang, Yue Wang, Wang, Shawn, Gorzalski, Andrew J., McSwiggin, Hayden, Tian Yu, Castaneda-Garcia, Kimberly, Prince, Brian, Hetan Wang, Huili Zheng, and Wei Yan
- Subjects
CRISPRS ,GENOME editing ,MICE ,STREPTAVIDIN ,MAMMAL genomes - Abstract
As an alternative and complementary approach to Cas9-based genome editing, Cas12a has not been widely used in mammalian cells largely due to its strict requirement for the TTTV protospacer adjacent motif (PAM) sequence. Here, we report that Mb3Cas12a (Moraxella bovoculi AAX11_00205) can efficiently edit the mouse genome based on the TTV PAM sequence with minimal numbers of large on-target deletions or insertions. When TTTV PAM sequence-targeting CRISPR (cr)RNAs of 23 nt spacers are used, >70% of the founders obtained are edited. Moreover, the use of Mb3Cas12a tagged to monomeric streptavidin (mSA) in conjunction with biotinylated DNA donor template leads to high knock-in efficiency in two-cell mouse embryos, with 40% of founders obtained containing the desired knock-in sequences. [ABSTRACT FROM AUTHOR]
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- 2020
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30. Reflexiones de la práctica pre profesional realizada en el primer y tercer grado de primaria de una institución educativa pública del distrito de Pueblo Libre
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Abanto Garcia, Kimberly Mirelly and Abanto Garcia, Kimberly Mirelly
- Abstract
El presente Informe de Suficiencia Profesional Docente tiene como objetivo evidenciar la adquisición de las 10 competencias docentes que propone la Facultad de Educación de la Pontificia Universidad Católica del Perú según su perfil de egreso en educación primaria y, además, medir el nivel de logro alcanzado por mi persona de dichas competencias en estos 5 años de formación académica. En este sentido, este documento se caracteriza por ser el resultado de una práctica reflexiva que considera las vivencias de la formación recibida en facultad y la práctica pre profesional realizada en el primer y tercer grado de primaria en una escuela pública del distrito de Pueblo Libre. Asimismo, el documento da muestra de la movilización de dichas competencias en las reflexiones que surgen de una experiencia docente realizada específicamente en el tercer grado de primaria de dicha institución. Para concluir, solo destacar que la lectura del informe se complementa con el portafolio virtual, el cual será la herramienta que contiene las evidencias del logro de los desempeños de las competencias previamente mencionadas., The objective of this Teaching Professional Proficiency Report is to demonstrate the acquisition of the 10 teaching competences proposed by the Faculty of Education of the Pontifical Catholic University of Peru according to their progress profile in primary education and, in addition, measure the level of achievement obtained by myself in differents skills in these 5 years of academic training. In this sense, this document is characterized by being the result of a reflective practice that considers the experiences of the training received in faculty and the preprofessional practice carried out in the first and third grade of primary school in a public school in the district of Pueblo Libre. Likewise, the document shows the mobilization of diverse competences in the reflections that arise from a teaching experience carried out specifically in the third grade of said institution. To conclude, just note that the reading of the report is complemented by the virtual portfolio, which will be the tool that contains the evidence of the achievement of the performance of the previously determined competencies.
31. Reflexiones de la práctica pre profesional realizada en el primer y tercer grado de primaria de una institución educativa pública del distrito de Pueblo Libre
- Author
-
Abanto Garcia, Kimberly Mirelly and Abanto Garcia, Kimberly Mirelly
- Abstract
El presente Informe de Suficiencia Profesional Docente tiene como objetivo evidenciar la adquisición de las 10 competencias docentes que propone la Facultad de Educación de la Pontificia Universidad Católica del Perú según su perfil de egreso en educación primaria y, además, medir el nivel de logro alcanzado por mi persona de dichas competencias en estos 5 años de formación académica. En este sentido, este documento se caracteriza por ser el resultado de una práctica reflexiva que considera las vivencias de la formación recibida en facultad y la práctica pre profesional realizada en el primer y tercer grado de primaria en una escuela pública del distrito de Pueblo Libre. Asimismo, el documento da muestra de la movilización de dichas competencias en las reflexiones que surgen de una experiencia docente realizada específicamente en el tercer grado de primaria de dicha institución. Para concluir, solo destacar que la lectura del informe se complementa con el portafolio virtual, el cual será la herramienta que contiene las evidencias del logro de los desempeños de las competencias previamente mencionadas., The objective of this Teaching Professional Proficiency Report is to demonstrate the acquisition of the 10 teaching competences proposed by the Faculty of Education of the Pontifical Catholic University of Peru according to their progress profile in primary education and, in addition, measure the level of achievement obtained by myself in differents skills in these 5 years of academic training. In this sense, this document is characterized by being the result of a reflective practice that considers the experiences of the training received in faculty and the preprofessional practice carried out in the first and third grade of primary school in a public school in the district of Pueblo Libre. Likewise, the document shows the mobilization of diverse competences in the reflections that arise from a teaching experience carried out specifically in the third grade of said institution. To conclude, just note that the reading of the report is complemented by the virtual portfolio, which will be the tool that contains the evidence of the achievement of the performance of the previously determined competencies.
32. Reflexiones de la práctica pre profesional realizada en el primer y tercer grado de primaria de una institución educativa pública del distrito de Pueblo Libre
- Author
-
Abanto Garcia, Kimberly Mirelly and Abanto Garcia, Kimberly Mirelly
- Abstract
El presente Informe de Suficiencia Profesional Docente tiene como objetivo evidenciar la adquisición de las 10 competencias docentes que propone la Facultad de Educación de la Pontificia Universidad Católica del Perú según su perfil de egreso en educación primaria y, además, medir el nivel de logro alcanzado por mi persona de dichas competencias en estos 5 años de formación académica. En este sentido, este documento se caracteriza por ser el resultado de una práctica reflexiva que considera las vivencias de la formación recibida en facultad y la práctica pre profesional realizada en el primer y tercer grado de primaria en una escuela pública del distrito de Pueblo Libre. Asimismo, el documento da muestra de la movilización de dichas competencias en las reflexiones que surgen de una experiencia docente realizada específicamente en el tercer grado de primaria de dicha institución. Para concluir, solo destacar que la lectura del informe se complementa con el portafolio virtual, el cual será la herramienta que contiene las evidencias del logro de los desempeños de las competencias previamente mencionadas., The objective of this Teaching Professional Proficiency Report is to demonstrate the acquisition of the 10 teaching competences proposed by the Faculty of Education of the Pontifical Catholic University of Peru according to their progress profile in primary education and, in addition, measure the level of achievement obtained by myself in differents skills in these 5 years of academic training. In this sense, this document is characterized by being the result of a reflective practice that considers the experiences of the training received in faculty and the preprofessional practice carried out in the first and third grade of primary school in a public school in the district of Pueblo Libre. Likewise, the document shows the mobilization of diverse competences in the reflections that arise from a teaching experience carried out specifically in the third grade of said institution. To conclude, just note that the reading of the report is complemented by the virtual portfolio, which will be the tool that contains the evidence of the achievement of the performance of the previously determined competencies.
33. NAFTA and the Politics of Labor Transnationalism - By Tamara Kay.
- Author
-
Garcia, Kimberly A. Nolan
- Subjects
TRANSNATIONALISM ,NONFICTION - Abstract
The article reviews the book "NAFTA and the Politics of Labor Transnationalism," by Tamara Kay.
- Published
- 2012
- Full Text
- View/download PDF
34. Capturing sequence diversity in metagenomes with comprehensive and scalable probe design.
- Author
-
Metsky HC, Siddle KJ, Gladden-Young A, Qu J, Yang DK, Brehio P, Goldfarb A, Piantadosi A, Wohl S, Carter A, Lin AE, Barnes KG, Tully DC, Corleis B, Hennigan S, Barbosa-Lima G, Vieira YR, Paul LM, Tan AL, Garcia KF, Parham LA, Odia I, Eromon P, Folarin OA, Goba A, Simon-Lorière E, Hensley L, Balmaseda A, Harris E, Kwon DS, Allen TM, Runstadler JA, Smole S, Bozza FA, Souza TML, Isern S, Michael SF, Lorenzana I, Gehrke L, Bosch I, Ebel G, Grant DS, Happi CT, Park DJ, Gnirke A, Sabeti PC, and Matranga CB
- Subjects
- Animals, Culicidae virology, Disease Outbreaks, Gene Library, Genetic Variation, Genomics, High-Throughput Nucleotide Sequencing, Humans, Lassa Fever virology, Nigeria epidemiology, Oligonucleotide Probes, Oligonucleotides genetics, Sequence Analysis, DNA, Virus Diseases, Computational Biology methods, Genome, Viral, Metagenome, Metagenomics
- Abstract
Metagenomic sequencing has the potential to transform microbial detection and characterization, but new tools are needed to improve its sensitivity. Here we present CATCH, a computational method to enhance nucleic acid capture for enrichment of diverse microbial taxa. CATCH designs optimal probe sets, with a specified number of oligonucleotides, that achieve full coverage of, and scale well with, known sequence diversity. We focus on applying CATCH to capture viral genomes in complex metagenomic samples. We design, synthesize, and validate multiple probe sets, including one that targets the whole genomes of the 356 viral species known to infect humans. Capture with these probe sets enriches unique viral content on average 18-fold, allowing us to assemble genomes that could not be recovered without enrichment, and accurately preserves within-sample diversity. We also use these probe sets to recover genomes from the 2018 Lassa fever outbreak in Nigeria and to improve detection of uncharacterized viral infections in human and mosquito samples. The results demonstrate that CATCH enables more sensitive and cost-effective metagenomic sequencing.
- Published
- 2019
- Full Text
- View/download PDF
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