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Deep-pelagic fishes are among the most abundant vertebrates on Earth. They play a critical role in sequestering carbon, providing prey for harvestable fishing stocks and linking oceanic layers and trophic levels. However, knowledge of these fishes is scarce and fragmented, hampering the ability of both the scientific community and stakeholders to address them effectively. While modelling approaches incorporating these organisms have advanced, they often oversimplify their functional and ecological diversity, potentially leading to misconceptions. To address these gaps, this synthesis examines the biodiversity and ecology of global deep-pelagic fishes. We review pelagic ecosystem classifications and propose a new semantic framework for deep-pelagic fishes. We evaluate different sampling methods, detailing their strengths, limitations and complementarities. We provide an assessment of the world's deep-pelagic fishes comprising 1554 species, highlighting major groups and discussing regional variability. By describing their morphological, behavioural and ecological diversity, we show that these organisms are far from homogeneous. Building on this, we call for a more realistic approach to the ecology of deep-pelagic fishes transitioning between very different ecological niches during diel vertical migrations. To facilitate this, we introduce the concept of 'diel-modulated realised niche' and propose a conceptual model synthesising the multiple drivers responsible for such transitions., (© 2024 John Wiley & Sons Ltd.)

It is commonly assumed that beach seining (BS) is more sustainable than bottom trawling because it involves non-motorized operations and limited fishing power. However, no scientific evidence supports this assumption. To address this gap, we evaluated the impact of beach seining, taking a small-scale shrimp fishery in northeast Brazil. Data collected monthly from December 2016 to November 2017 and in literature, were assessed (BS 31,001 individuals, 119 species, 37 families, and 19 orders; BT 6,031 individuals, 58 species, 20 families, and 14 orders). Beach seining demonstrated a lower proportion of bycatch (BS 1:2.3; BT 1:3.2), higher total shrimp catch (BS 87.2 t; BT 65 t), and greater species diversity than bottom trawling catches (BS 119; BT 58). Other aspects were closer associated with bottom trawling, such as the composition of dominant families (Sciaenidae and Pristigasteridae), the proportion of rare species (BS 30%; BT 24%) juveniles (BS 11g; BT 13g), the risk of species extinction, and the composition of ecological guilds. Despite their social significance, both fishing gears showed similar ecological indicators and adverse effects. The findings establish that the ecological concerns related to the impact of bottom trawling are also applicable to beach seine.

Ocean dynamics initiate the structure of nutrient income driving primary producers, and these, in turn, shape the distribution of subsequent trophic levels until the whole pelagic community reflects the physicochemical structure of the ocean. Despite the importance of bottom-up structuring in pelagic ecosystems, fine-scale studies of biophysical interactions along depth are scarce and challenging. To improve our understanding of such relationships, we analyzed the vertical structure of key oceanographic variables along with the distribution of acoustic biomass from multi-frequency acoustic data (38, 70, and 120 kHz) as a reference for pelagic fauna. In addition, we took advantage of species distribution databases collected at the same time to provide further interpretation. The study was performed in the Southwestern Tropical Atlantic of northeast Brazil in spring 2015 and autumn 2017, periods representative of canonical spring and autumn conditions in terms of thermohaline structure and current dynamics. We show that chlorophyll-a, oxygen, current, and stratification are important drivers for the distribution of sound scattering biota but that their relative importance depends on the area, the depth range, and the diel cycle. Prominent sound scattering layers (SSLs) in the epipelagic layer were associated with strong stratification and subsurface chlorophyll-a maximum. In areas where chlorophyll-a maxima were deeper than the peak of stratifications, SSLs were more correlated with stratification than subsurface chlorophyll maxima. Dissolved oxygen seems to be a driver in locations where lower oxygen concentration occurs in the subsurface. Finally, our results suggest that organisms seem to avoid strong currents core. However, future works are needed to better understand the role of currents on the vertical distribution of organisms., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2023 Assunção et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)

Microplastics (MPs; <5 mm) are a macro issue recognised worldwide as a threat to biodiversity and ecosystems. Widely distributed in marine ecosystems, MPs have already been found in the deep-sea environment. However, there is little information on ecological mechanisms driving MP uptake by deep-sea species. For the first time, this study generates data on MP contamination in mesopelagic fishes from the Southwestern Tropical Atlantic (SWTA) to help understand the deep-sea contamination patterns. An alkaline digestion protocol was applied to extract MPs from the digestive tract of four mesopelagic fish species: Argyropelecus sladeni, Sternoptyx diaphana (Sternoptychidae), Diaphus brachycephalus, and Hygophum taaningi (Myctophidae). A total of 213 particles were recovered from 170 specimens, and MPs were found in 67% of the specimens. Fibres were the most common shape found in all species, whereas polyamide, polyethylene, and polyethylene terephthalate were the most frequent polymers. The most contaminated species was A. sladeni (93%), and the least contaminated was S. diaphana (45%). Interestingly, individuals caught in the lower mesopelagic zone (500-1000 m depth) were less contaminated with MPs than those captured in the upper mesopelagic layer (200-500 m). Our results highlight significant contamination levels and reveal the influence of mesopelagic fishes on MPs transport in the deep waters of the SWTA., (Copyright © 2022 Elsevier Ltd. All rights reserved.)

Mesopelagic fishes are numerically the most important vertebrate group of all world's oceans. While these species are increasingly threatened by anthropogenic activities, basic biological knowledge is still lacking. For instance, major uncertainties remain on the behaviour, ecology, and thus functional roles of mesopelagic micronektivores, particularly regarding their interactions with physicochemical features. Here, we examine the trophic ecology, habitat, and migratory behaviour of the viperfish (Chauliodus sloani)-a poorly known and abundant deep-sea species-to further understand the ecology and thus functional role of mesopelagic micronektivores. Moreover, we explore how physical drivers may affect these features and how these relationships are likely to change over large oceanic areas. The viperfish heavily preys on epipelagic migrant species, especially myctophids, and presents spatial and trophic ontogenetic shifts. Temperature restricts its vertical distribution. Therefore, its trophodynamics, migratory behaviour, and functional roles are expected to be modulated by the latitudinal change in temperature. For instance, in most tropical regions the viperfish stay full-time feeding, excreting, and serving as prey (e.g. for bathypelagic predators) at deep layers. On the contrary, in temperate regions, the viperfish ascend to superficial waters where they trophically interact with epipelagic predators and may release carbon where its remineralization is the greatest.