965 results on '"Eccher A."'
Search Results
2. Improving the Annotation Process in Computational Pathology: A Pilot Study with Manual and Semi-automated Approaches on Consumer and Medical Grade Devices
- Author
-
Cazzaniga, Giorgio, Del Carro, Fabio, Eccher, Albino, Becker, Jan Ulrich, Gambaro, Giovanni, Rossi, Mattia, Pieruzzi, Federico, Fraggetta, Filippo, Pagni, Fabio, and L’Imperio, Vincenzo
- Published
- 2024
- Full Text
- View/download PDF
3. Comparing deep learning and pathologist quantification of cell-level PD-L1 expression in non-small cell lung cancer whole-slide images
- Author
-
van Eekelen, Leander, Spronck, Joey, Looijen-Salamon, Monika, Vos, Shoko, Munari, Enrico, Girolami, Ilaria, Eccher, Albino, Acs, Balazs, Boyaci, Ceren, de Souza, Gabriel Silva, Demirel-Andishmand, Muradije, Meesters, Luca Dulce, Zegers, Daan, van der Woude, Lieke, Theelen, Willemijn, van den Heuvel, Michel, Grünberg, Katrien, van Ginneken, Bram, van der Laak, Jeroen, and Ciompi, Francesco
- Published
- 2024
- Full Text
- View/download PDF
4. Comparing deep learning and pathologist quantification of cell-level PD-L1 expression in non-small cell lung cancer whole-slide images
- Author
-
Leander van Eekelen, Joey Spronck, Monika Looijen-Salamon, Shoko Vos, Enrico Munari, Ilaria Girolami, Albino Eccher, Balazs Acs, Ceren Boyaci, Gabriel Silva de Souza, Muradije Demirel-Andishmand, Luca Dulce Meesters, Daan Zegers, Lieke van der Woude, Willemijn Theelen, Michel van den Heuvel, Katrien Grünberg, Bram van Ginneken, Jeroen van der Laak, and Francesco Ciompi
- Subjects
Medicine ,Science - Abstract
Abstract Programmed death-ligand 1 (PD-L1) expression is currently used in the clinic to assess eligibility for immune-checkpoint inhibitors via the tumor proportion score (TPS), but its efficacy is limited by high interobserver variability. Multiple papers have presented systems for the automatic quantification of TPS, but none report on the task of determining cell-level PD-L1 expression and often reserve their evaluation to a single PD-L1 monoclonal antibody or clinical center. In this paper, we report on a deep learning algorithm for detecting PD-L1 negative and positive tumor cells at a cellular level and evaluate it on a cell-level reference standard established by six readers on a multi-centric, multi PD-L1 assay dataset. This reference standard also provides for the first time a benchmark for computer vision algorithms. In addition, in line with other papers, we also evaluate our algorithm at slide-level by measuring the agreement between the algorithm and six pathologists on TPS quantification. We find a moderately low interobserver agreement at cell-level level (mean reader-reader F1 score = 0.68) which our algorithm sits slightly under (mean reader-AI F1 score = 0.55), especially for cases from the clinical center not included in the training set. Despite this, we find good AI-pathologist agreement on quantifying TPS compared to the interobserver agreement (mean reader-reader Cohen’s kappa = 0.54, 95% CI 0.26–0.81, mean reader-AI kappa = 0.49, 95% CI 0.27—0.72). In conclusion, our deep learning algorithm demonstrates promise in detecting PD-L1 expression at a cellular level and exhibits favorable agreement with pathologists in quantifying the tumor proportion score (TPS). We publicly release our models for use via the Grand-Challenge platform.
- Published
- 2024
- Full Text
- View/download PDF
5. Life cycle assessment of food consumption in different cities: Analysis of socioeconomic level and environmental hotspots
- Author
-
Francisca Riveros, Camila López-Eccher, and Edmundo Muñoz
- Subjects
LCA ,Food production ,Food loss and waste ,Chile ,Circular economy ,Environmental effects of industries and plants ,TD194-195 - Abstract
This study presents a comprehensive life cycle assessment of the environmental impacts of dietary patterns in different cities, focusing on the correlation between food consumption and environmental impact. The functional unit was the food required to meet one person's yearly needs (1 Inh/year). To determine the quantity and type of food consumed, as well as the income level of the residents, 523 surveys were conducted in households in four cities in Chile (Iquique, Santiago, Temuco, and Coyhaique). Survey data were complemented with secondary information from national statistics and the Ecoinvent database. The environmental impact assessment was carried out using SimaPro, selecting the categories of global warming, terrestrial acidification, terrestrial ecotoxicity, freshwater ecotoxicity, freshwater eutrophication, land use, and fossil resource scarcity. The results show that higher-income households generate greater environmental impacts attributed to higher per capita food consumption. In the global warming category, the environmental impact can range from 1.08 kg CO2 eq/inh/year for the first quintile to 2.15 kg CO2 eq/inh/year for the fifth quintile in Santiago. In this category, the impacts in the highest quintiles can be up to 2.2 times greater than those in the lowest quintiles. Similarly, in acidification, this difference can reach 2.3 times. In the freshwater eutrophication category, the highest-income quintiles can double the environmental impacts compared to the lowest (I and II), mainly due to higher consumption of red meat and dairy products. The food production stage was the environmental hotspot across all evaluated impact categories, accounting for 45%–60% of the impacts in global warming, terrestrial ecotoxicity, and fossil resource scarcity; 74%–78% in terrestrial acidification, freshwater eutrophication, and land use; and 68%–71% in freshwater ecotoxicity. Meat was pinpointed as the primary environmental hotspot in global warming (44%), terrestrial acidification (56%), freshwater eutrophication (50%), land use (35%), and fossil resource scarcity (30%). Conversely, cereals are the primary environmental hotspot in terrestrial ecotoxicity (30%) and vegetables in freshwater ecotoxicity (18%). The geographical location of cities also influenced the environmental impacts of food consumption, primarily due to the types of available foods in regions near each city. Food availability conditions, diets, and quantities consumed, thus influencing environmental impacts. Finally, household incomes, the geographical location of cities, and the food production systems in each city determine the environmental impacts of food consumption. Different configurations of these variables create unique environmental impact profiles for each city. Despite this, typical environmental hotspots in food consumption were identified across all cities, enabling the implementation of strategies to minimize environmental impacts on a national scale. Thus, circular economy strategies linked to food production systems, as well as food loss and waste, could significantly reduce environmental impacts, presenting an intriguing opportunity for future research in this field.
- Published
- 2024
- Full Text
- View/download PDF
6. Combining gemcitabine and MSC delivering soluble TRAIL to target pancreatic adenocarcinoma and its stroma
- Author
-
Grisendi, Giulia, Dall’Ora, Massimiliano, Casari, Giulia, Spattini, Giliola, Farshchian, Moein, Melandri, Aurora, Masciale, Valentina, Lepore, Fabio, Banchelli, Federico, Costantini, Riccardo Cuoghi, D’Esposito, Angela, Chiavelli, Chiara, Spano, Carlotta, Spallanzani, Andrea, Petrachi, Tiziana, Veronesi, Elena, Ferracin, Manuela, Roncarati, Roberta, Vinet, Jonathan, Magistri, Paolo, Catellani, Barbara, Candini, Olivia, Marra, Caterina, Eccher, Albino, Bonetti, Luca Reggiani, Horwitz, Edwin M., Di Benedetto, Fabrizio, and Dominici, Massimo
- Published
- 2024
- Full Text
- View/download PDF
7. Life cycle assessment of food consumption in different cities: Analysis of socioeconomic level and environmental hotspots
- Author
-
Riveros, Francisca, López-Eccher, Camila, and Muñoz, Edmundo
- Published
- 2024
- Full Text
- View/download PDF
8. Organisational models supported by technology for the management of diabetic disease and its complications in a diabetic clinic setting: study protocol for a randomised controlled trial targeting type 2 diabetes individuals with non-ideal glycaemic values (Telemechron study)
- Author
-
Giovanazzi, Alexia, Gios, Lorenzo, Mastellaro, Marina, Gentilini, Maria Adalgisa, Valent, Francesca, Condini, Sara, Bincoletto, Giorgia, Bacchiega, Alessandro, Zorzi, Andrea, Malfatti, Giulia, Perini, Francesca, Eccher, Claudio, Marchesoni, Michele, Dall’Alda, Marlene, Orrasch, Massimo, Conforti, Diego, and Inchiostro, Sandro
- Published
- 2023
- Full Text
- View/download PDF
9. Acoustic projectors make covert bioacoustic chirplet signals discoverable
- Author
-
Casari, Paolo, Neasham, Jeff, Gubnitsky, Guy, Eccher, Davide, and Diamant, Roee
- Published
- 2023
- Full Text
- View/download PDF
10. Children’s subjective uncertainty-driven sampling behaviour
- Author
-
Martina de Eccher, Roger Mundry, and Nivedita Mani
- Subjects
active learning ,sampling ,information-seeking behaviour ,uncertainty reduction ,knowledge gaps ,cross-situational word learning ,Science - Abstract
Are children and adults sensitive to gaps in their knowledge, and do they actively elicit information to resolve such knowledge gaps? In a cross-situational word learning task, we asked 5-year-olds, 6- to 9-year-olds and adults to estimate their knowledge of newly learned word–object associations. We then examined whether participants preferentially sampled objects they reported not knowing the label in order to hear their labels again. We also examined whether such uncertainty-driven sampling behaviour led to improved learning. We found that all age groups were sensitive to gaps in their knowledge of the word–object associations, i.e. were more likely to say they had correctly indicated the label of an object when they were correct, relative to when they were incorrect. Furthermore, 6- to 9-year-olds and adults—but not 5-year-olds—were more likely to sample objects whose labels they reported not knowing. In other words, older children and adults displayed sampling behaviour directed at reducing knowledge gaps and uncertainty, while younger children did not. However, participants who displayed more uncertainty-driven sampling behaviour were not more accurate at test. Our findings underscore the role of uncertainty in driving 6- to 9-year-olds’ and adults’ sampling behaviour and speak to the mechanisms underlying previously reported performance boosts in active learning.
- Published
- 2024
- Full Text
- View/download PDF
11. Charge carrier transport in perylene-based and pyrene-based columnar liquid crystals
- Author
-
Alessandro L. Alves, Simone V. Bernardino, Carlos H. Stadtlober, Edivandro Girotto, Giliandro Farias, Rodney M. do Nascimento, Sergio F. Curcio, Thiago Cazati, Marta E. R. Dotto, Juliana Eccher, Leonardo N. Furini, Hugo Gallardo, Harald Bock, and Ivan H. Bechtold
- Subjects
charge carrier transport ,columnar liquid crystal ,organic electronics ,perylene ,pyrene ,Science ,Organic chemistry ,QD241-441 - Abstract
Electron and hole transport characteristics were evaluated for perylene-based and pyrene-based compounds using electron-only and hole-only devices. The perylene presented a columnar hexagonal liquid crystal phase at room temperature with strong molecular π-stacking inside the columns. The pyrene crystallizes bellow 166 °C, preserving the close-packed columnar rectangular structure of the mesophase. Photophysical analysis and numerical calculations assisted the interpretation of positive and negative charge carrier mobilities obtained from fitting the space charge limited regime of current vs voltage curves. The pyrene-based material demonstrated an electron mobility two orders of magnitude higher than the perylene one, indicating the potential of this class of materials as electron transporting layer.
- Published
- 2023
- Full Text
- View/download PDF
12. Perylene-Based columnar liquid Crystal: Revealing resistive switching for nonvolatile memory devices
- Author
-
Avila, L.B., Chulkin, P., Serrano, P.A., Dreyer, J.P., Berteau-Rainville, M., Orgiu, E., França, L.D.L., Zimmermann, L.M., Bock, H., Faria, G.C., Eccher, J., and Bechtold, I.H.
- Published
- 2024
- Full Text
- View/download PDF
13. Active learning, feedback and hypercorrection effect in word learning
- Author
-
de Eccher, Martina and Mani, Nivedita
- Subjects
Psychology ,Learning - Abstract
How do individuals select which of multiple sources of information to attend to, and which events and entities in their environment to solicit more information about? This studyaims at understanding whether adults actively solicit information that they are missing to fill gaps in their knowledge of recently learned novel word-object associations. In otherwords, we ask whether adults actively solicit the labels of objects they are not confident about. Furthermore, given the role of confidence on the influence of feedback on word learning, we ask whether the beneficial effects of feedback on errors vary as a result of the confidence learners have in their knowledge of newly learned novel word-object associations. We will also compare the findings of this study to the results of a study with the same design that was conducted with preschoolers.
- Published
- 2022
14. Organisational models supported by technology for the management of diabetic disease and its complications in a diabetic clinic setting: study protocol for a randomised controlled trial targeting type 2 diabetes individuals with non-ideal glycaemic values (Telemechron study)
- Author
-
Alexia Giovanazzi, Lorenzo Gios, Marina Mastellaro, Maria Adalgisa Gentilini, Francesca Valent, Sara Condini, Giorgia Bincoletto, Alessandro Bacchiega, Andrea Zorzi, Giulia Malfatti, Francesca Perini, Claudio Eccher, Michele Marchesoni, Marlene Dall’Alda, Massimo Orrasch, Diego Conforti, and Sandro Inchiostro
- Subjects
Type 2 diabetes mellitus ,Technology ,Telemedicine ,mHealth ,Mobile application ,Smartphone ,Medicine (General) ,R5-920 - Abstract
Abstract Introduction Type 2 diabetes mellitus (T2DM) is a non-communicable disease representing one of the most serious public health challenges of the twenty-first century. Its incidence continues to rise in both developed and developing countries, causing the death of 1.5 million people every year. The use of technology (e.g. smartphone application—App) in the health field has progressively increased as it has been proved to be effective in helping individuals manage their long-term diseases. Therefore, it has the potential to reduce the use of health service and its related costs. The objective of this study is to evaluate the impact of using a digital platform called “TreC Diabete” embedded into a novel organisational asset targeting poorly controlled T2DM individuals in the Autonomous Province of Trento (PAT), Italy. Methods This trial was designed as a multi-centre, open-label, randomised, superiority study with two parallel groups and a 1:1 allocation ratio. Individuals regularly attending outpatient diabetes clinics, providing informed consent, are randomised to be prescribed TreC Diabete platform as part of their personalised care plan. Healthcare staff members will remotely assess the data shared by the participants through the App by using a dedicated online medical dashboard. The primary end-point is the evaluation of the Hb1Ac level at 12-month post-randomisation. Data will be analysed on an intention-to-treat (ITT) basis. Discussion This trial is the first conducted in the PAT area for the use of an App specifically designed for individuals with poorly controlled T2DM. If the effects of introducing this specific App within a new organisational asset are positive, the digital platform will represent a possible way for people diagnosed with T2DM to better manage their health in the future. Results will be disseminated through conferences and peer-reviewed journals once the study is completed. Trial registration ClinicalTrials.gov NCT05629221. Registered on November 29, 2022, prior start of inclusion.
- Published
- 2023
- Full Text
- View/download PDF
15. CSF levels of Chitinase3like1 correlate with early response to cladribine in multiple sclerosis
- Author
-
Damiano Marastoni, Matteo Foschi, Chiara Eccher, Francesco Crescenzo, Valentina Mazziotti, Agnese Tamanti, Albulena Bajrami, Valentina Camera, Stefano Ziccardi, Maddalena Guandalini, Francesca Bosello, Daniela Anni, Federica Virla, Ermanna Turano, Michele Romoli, Raffaella Mariotti, Francesca Benedetta Pizzini, Bruno Bonetti, and Massimiliano Calabrese
- Subjects
relapsing multiple sclerosis ,cytokines ,chemokines ,cladribine ,disease activity ,biomarkers ,Immunologic diseases. Allergy ,RC581-607 - Abstract
BackgroundCladribine has been introduced as a high-efficacy drug for treating relapsing-remitting multiple sclerosis (RRMS). Initial cohort studies showed early disease activity in the first year after drug initiation. Biomarkers that can predict early disease activity are needed.AimTo estimate cerebrospinal fluid (CSF) markers of clinical and radiological responses after initiation of cladribine.MethodsForty-two RRMS patients (30F/12M) treated with cladribine were included in a longitudinal prospective study. All patients underwent a CSF examination at treatment initiation, clinical follow-up including Expanded Disability Status Scale (EDSS) assessment, and a 3T MRI scan after 6,12 and 24 months, including the evaluation of white matter (WM) and cortical lesions (CLs). CSF levels of 67 inflammatory markers were assessed with immune-assay multiplex techniques. The ‘no evidence of disease activity’ (NEDA-3) status was assessed after two years and defined by no relapses, no disability worsening measured by EDSS and no MRI activity, including CLs.ResultsThree patients were lost at follow-up. At the end of follow-up, 19 (48%) patients remained free from disease activity. IFNgamma, Chitinase3like1, IL32, Osteopontin, IL12(p40), IL34, IL28A, sTNFR2, IL20 and CCL2 showed the best association with disease activity. When added in a multivariate regression model including age, sex, and baseline EDSS, Chitinase 3 like1 (p = 0.049) significantly increased in those patients with disease activity. Finally, ROC analysis with Chitinase3like1 added to a model with EDSS, sex, age previous relapses, WM lesion number, CLs, number of Gad enhancing lesions and spinal cord lesions provided an AUC of 0.76 (95%CI 0.60-0.91).ConclusionsCSF Chitinase 3 like1 might provide prognostic information for predicting disease activity in the first years after initiation of cladribine. The drug’s effect on chronic macrophage and microglia activation deserves further evaluation.
- Published
- 2024
- Full Text
- View/download PDF
16. Identification and validation of diagnostic cut-offs of the ELISpot assay for the diagnosis of invasive aspergillosis in high-risk patients.
- Author
-
Francesca Bettelli, Daniela Vallerini, Ivana Lagreca, Patrizia Barozzi, Giovanni Riva, Vincenzo Nasillo, Ambra Paolini, Roberto D'Amico, Fabio Forghieri, Monica Morselli, Valeria Pioli, Andrea Gilioli, Davide Giusti, Andrea Messerotti, Paola Bresciani, Angela Cuoghi, Elisabetta Colaci, Roberto Marasca, Livio Pagano, Anna Candoni, Johan Maertens, Pierluigi Viale, Cristina Mussini, Rossella Manfredini, Enrico Tagliafico, Mario Sarti, Tommaso Trenti, Russell Lewis, Patrizia Comoli, Albino Eccher, Mario Luppi, and Leonardo Potenza
- Subjects
Medicine ,Science - Abstract
ObjectiveWe investigated the performance of enzyme linked immunospot (ELISpot) assay for the diagnosis of invasive aspergillosis (IA) in high-risk patients with hematologic malignancies.MethodsWe prospectively enrolled two cohorts of patients undergoing intensive myelosuppressive or immunosuppressive treatments at high risk for IA. ELISpot was performed to detect Aspergillus-specific T cells producing Interleukin-10.ResultsIn the discovery cohort, a derived cut-off of 40 spot forming cells (SFCs)/106 PBMCs has shown to correctly classify IA cases with a sensitivity and specificity of 89.5% and 88.6%, respectively. This cut-off is lowered to 25 SFC when considering the subset of possible IA patients, with sensitivity and specificity of 76% and 93%, respectively. The application of the 40 SFCs cut-off to the validation cohort resulted in a positivity rate of 83.3% in proven/probable cases and a negativity rate of 92.5% in possible/non-IA cases. Adopting the 25 SCFs cut-off, the assay resulted positive in 83.3% of proven/probable cases while it resulted negative in 66.7% of possible/non-IA cases.ConclusionsELISpot shows promises in the diagnosis of IA and the possibility to use two distinct cut-offs with similar diagnostic performances according to patients' different pre-test probability of infection can widen its use in patients at risk.
- Published
- 2024
- Full Text
- View/download PDF
17. Exploiting Scene-specific Features for Object Goal Navigation
- Author
-
Campari, Tommaso, Eccher, Paolo, Serafini, Luciano, and Ballan, Lamberto
- Subjects
Computer Science - Computer Vision and Pattern Recognition - Abstract
Can the intrinsic relation between an object and the room in which it is usually located help agents in the Visual Navigation Task? We study this question in the context of Object Navigation, a problem in which an agent has to reach an object of a specific class while moving in a complex domestic environment. In this paper, we introduce a new reduced dataset that speeds up the training of navigation models, a notoriously complex task. Our proposed dataset permits the training of models that do not exploit online-built maps in reasonable times even without the use of huge computational resources. Therefore, this reduced dataset guarantees a significant benchmark and it can be used to identify promising models that could be then tried on bigger and more challenging datasets. Subsequently, we propose the SMTSC model, an attention-based model capable of exploiting the correlation between scenes and objects contained in them, highlighting quantitatively how the idea is correct., Comment: Accepted at ACVR2020 ECCV2020 Workshop
- Published
- 2020
18. Exceptional Response in BRAF p.V600E-Mutant Enteric-Type Adenocarcinoma of the Lung With Cutaneous Spread: A Case Report
- Author
-
Marco Sposito, MD, Ilaria Mariangela Scaglione, MD, Serena Eccher, MD, Luca Pasqualin, MD, Alice Avancini, PhD, Chiara Colato, MD, Paolo Rosina, MD, Michele Simbolo, PhD, Anna Caliò, MD, PhD, Aldo Scarpa, MD, Michele Milella, MD, Sara Pilotto, MD, PhD, and Lorenzo Belluomini, MD
- Subjects
Non–small cell lung cancer ,BRAF p.V600E ,Cutaneous metastases ,Enteric-type lung adenocarcinoma ,Dabrafenib plus trametinib ,Case report ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background: Enteric-type adenocarcinoma of the lung (lung-ETAC) is a rare form of lung cancer with histologic similarities to colorectal cancer, with aggressive behavior and unfavorable prognosis. Case Presentation: An 81-year-old man presented with discolored skin lesions on the chest and abdomen. After comprehensive evaluation, including skin biopsy and molecular profiling, the patient was diagnosed with having lung-ETAC with a BRAF p.V600E mutation. Treatment with dabrafenib and trametinib initially resulted in positive results, with improvement in skin lesions and overall clinical condition. Nevertheless, approximately 6 months after, the disease had progression with new skin lesions reappearing. Conclusions: We reported a unique case of a patient with BRAF p.V600E-mutant lung-ETAC with metastatic skin lesions achieving complete cutaneous response after targeted treatment with dabrafenib and trametinib, highlighting the potential for targeted therapy in patients with lung-ETAC harboring a BRAF p.V600E mutation.
- Published
- 2023
- Full Text
- View/download PDF
19. Second Opinion in the Italian Organ Procurement Transplantation: The Pathologist Is In
- Author
-
Albino Eccher, Deborah Malvi, Luca Novelli, Claudia Mescoli, and Antonietta D’Errico
- Subjects
second opinion ,transplantation ,risk assessment ,Medicine (General) ,R5-920 - Abstract
Second opinion consultation is a well-established practice in different clinical settings of diagnostic medicine. However, little is known about second opinion consultation activity in transplantation, and even less is known about it concerning donor assessment. The consultations provided by the second opinion service led to the safer and homogeneous management of donors with a history of malignancy or ongoing neoplasm by transplant centers. Indeed, two of the most important aspects are the reduction of semantic differences in cancer reporting and the standardization of procedures, which are mainly due to the different settings and logistics of different pathology services. This article aims to discuss the role and the future of the second opinion in Italy during organ procurement, highlighting the critical issues and areas for improvement.
- Published
- 2023
- Full Text
- View/download PDF
20. Congo Red Staining in Digital Pathology: The Streamlined Pipeline for Amyloid Detection Through Congo Red Fluorescence Digital Analysis
- Author
-
Cazzaniga, Giorgio, Bolognesi, Maddalena Maria, Stefania, Matteo Davide, Mascadri, Francesco, Eccher, Albino, Alberici, Federico, Mescia, Federica, Smith, Andrew, Fraggetta, Filippo, Rossi, Mattia, Gambaro, Giovanni, Pagni, Fabio, and L’Imperio, Vincenzo
- Published
- 2023
- Full Text
- View/download PDF
21. Acoustic projectors make covert bioacoustic chirplet signals discoverable
- Author
-
Paolo Casari, Jeff Neasham, Guy Gubnitsky, Davide Eccher, and Roee Diamant
- Subjects
Medicine ,Science - Abstract
Abstract To disguise man-made communications as natural signals, underwater transceivers have the option to pre-record animal vocalizations, and play them back in a way that carries meaningful information for a trained receiver. This operation, known as biomimicking, has been used to perform covert communications and to emit broadband signals for localization, either by playing pre-recorded animal sounds back into the environment, or by designing artificial waveforms whose spectrum is close to that of bioacoustic sounds.However, organic sound-emitting body structures in animals have very different trans-characteristics with respect to electro-acoustic transducers used in underwater acoustic transceivers. In this paper, we observe the distortion induced by transmitting pre-recorded animal vocalization through a transducer’s front-end, and argue that such distortion can be detected via appropriate entropy metrics. We test ten different metrics for this purpose, both via emulated transmission and in two field experiments. Our result indicate which signals and entropy metrics lead to the highest probability of detecting transducer-originated distortions, thus exposing ongoing covert communications. Our research emphasizes the limitations that man-made equipment incurs when reproducing bioacoustic sounds, and prompts for the choice of biomimicking signals that are possibly suboptimal for communications or localization, but help avoid exposing disguised transmissions.
- Published
- 2023
- Full Text
- View/download PDF
22. Supporting patients and clinicians during the breast cancer care path with AI: The Arianna solution
- Author
-
Dragoni, Mauro, Eccher, Claudio, Ferro, Antonella, Bailoni, Tania, Maimone, Rosa, Zorzi, Andrea, Bacchiega, Alessandro, Stulzer, Gabriele, and Ghidini, Chiara
- Published
- 2023
- Full Text
- View/download PDF
23. The application of artificial intelligence to thyroid nodule assessment
- Author
-
Rizzo, P, Marletta, S, Caldonazzi, N, Nottegar, A, Eccher, A, Pagni, F, L'Imperio, V, Pantanowitz, L, Rizzo P. C., Marletta S., Caldonazzi N., Nottegar A., Eccher A., Pagni F., L'Imperio V., Pantanowitz L., Rizzo, P, Marletta, S, Caldonazzi, N, Nottegar, A, Eccher, A, Pagni, F, L'Imperio, V, Pantanowitz, L, Rizzo P. C., Marletta S., Caldonazzi N., Nottegar A., Eccher A., Pagni F., L'Imperio V., and Pantanowitz L.
- Abstract
Artificial intelligence (AI) is of considerable interest in the healthcare community including its diagnostic applications for thyroid nodules in assisting both radiology and FNA assessment. Fine-needle aspiration (FNA) helps distinguishing benign from malignant thyroid nodules and is a crucial step in the initial diagnosis of cancer. The classification of some lesions can be challenging, and the use of AI in some cases may become essential in order not to give an indeterminate result to the lesion. In this review, we summarize the available evidence regarding the application of AI in thyroid imaging and cytopathology. There are now considerable applications in digital waiting to be approved that will save time and cut costs. The published literature to date has shown promising results. However, future work is required to better define how this technology can be exploited in routine cytopathology practice.
- Published
- 2024
24. Artificial intelligence–based algorithms for the diagnosis of prostate cancer: A systematic review
- Author
-
Marletta, S, Eccher, A, Martelli, F, Santonicco, N, Girolami, I, Scarpa, A, Pagni, F, L’Imperio, V, Pantanowitz, L, Gobbo, S, Seminati, D, Dei Tos, A, Parwani, A, Marletta, Stefano, Eccher, Albino, Martelli, Filippo Maria, Santonicco, Nicola, Girolami, Ilaria, Scarpa, Aldo, Pagni, Fabio, L’Imperio, Vincenzo, Pantanowitz, Liron, Gobbo, Stefano, Seminati, Davide, Dei Tos, Angelo Paolo, Parwani, Anil, Marletta, S, Eccher, A, Martelli, F, Santonicco, N, Girolami, I, Scarpa, A, Pagni, F, L’Imperio, V, Pantanowitz, L, Gobbo, S, Seminati, D, Dei Tos, A, Parwani, A, Marletta, Stefano, Eccher, Albino, Martelli, Filippo Maria, Santonicco, Nicola, Girolami, Ilaria, Scarpa, Aldo, Pagni, Fabio, L’Imperio, Vincenzo, Pantanowitz, Liron, Gobbo, Stefano, Seminati, Davide, Dei Tos, Angelo Paolo, and Parwani, Anil
- Abstract
Objectives: The high incidence of prostate cancer causes prostatic samples to significantly affect pathology laboratories workflow and turnaround times (TATs). Whole-slide imaging (WSI) and artificial intelligence (AI) have both gained approval for primary diagnosis in prostate pathology, providing physicians with novel tools for their daily routine. Methods: A systematic review according to the Preferred Reporting Items for Systematic Reviews and Meta-Analyses guidelines was carried out in electronic databases to gather the available evidence on the application of AI-based algorithms to prostate cancer. Results: Of 6290 articles, 80 were included, mostly (59%) dealing with biopsy specimens. Glass slides were digitized to WSI in most studies (89%), roughly two-thirds of which (66%) exploited convolutional neural networks for computational analysis. The algorithms achieved good to excellent results about cancer detection and grading, along with significantly reduced TATs. Furthermore, several studies showed a relevant correlation between AI-identified histologic features and prognostic predictive variables such as biochemical recurrence, extraprostatic extension, perineural invasion, and disease-free survival. Conclusions: The published evidence suggests that AI can be reliably used for prostate cancer detection and grading, assisting pathologists in the time-consuming screening of slides. Further technologic improvement would help widening AI's adoption in prostate pathology, as well as expanding its prognostic predictive potential.
- Published
- 2024
25. Donors risk assessment in transplantation: From the guidelines to their real-world application
- Author
-
Malvi, D, Vasuri, F, Albertini, E, Carbone, M, Novelli, L, Mescoli, C, Cardillo, M, Pagni, F, D'Errico, A, Eccher, A, Malvi, Deborah, Vasuri, Francesco, Albertini, Elisa, Carbone, Maurizio, Novelli, Luca, Mescoli, Claudia, Cardillo, Massimo, Pagni, Fabio, D'Errico, Antonia, Eccher, Albino, Malvi, D, Vasuri, F, Albertini, E, Carbone, M, Novelli, L, Mescoli, C, Cardillo, M, Pagni, F, D'Errico, A, Eccher, A, Malvi, Deborah, Vasuri, Francesco, Albertini, Elisa, Carbone, Maurizio, Novelli, Luca, Mescoli, Claudia, Cardillo, Massimo, Pagni, Fabio, D'Errico, Antonia, and Eccher, Albino
- Abstract
Transplantation of an organ from a donor carries an unavoidable risk of tumor transmission. The need to extend the donor pool increases the use of organs from donors with malignancies and potential disease transmission is a constant tension influencing donor suitability decisions. Current classification systems for the assessment of donor malignancy transmission risk have evolved from reports of potential transmission events in recipients to national donation and transplant surveillance agencies. Although the risk of malignancy transmission is very low in the general transplant setting it must constantly be balanced with the transplant benefits. Guidelines are mainly based on large registries and sparse case reports of transmission, so they cannot cover all the possible situations. For this reason, in 2004 in Italy, the National Transplant Center gave rise to the Second Opinion Service, charged by the Ministry of Health, by structuring expertise in diagnostic oncology and risk transmission and making it available to the Italian Transplant Centers. In this paper the registry of the Italian Oncological Second Opinion was reviewed, from 2016 to 2018, to detail the most frequent and problematic neoplastic topics addressed, those are separately reported and discussed. Furthermore, a review of the most recent strategies and risk stratification is provided, according to the most recent literature evidence and to the European Guidelines.
- Published
- 2024
26. Pathology Laboratory Archives: Conservation Quality of Nucleic Acids and Proteins for NSCLC Molecular Testing
- Author
-
Eccher, A, Seminati, D, L’Imperio, V, Casati, G, Pilla, D, Malapelle, U, Piga, I, Bindi, G, Marando, A, Bonoldi, E, Dainese, E, Riefolo, M, D’Errico, A, Costantini, M, Lugli, A, Grassi, S, Scarpa, A, Dei Tos, A, Pagni, F, Eccher, Albino, Seminati, Davide, L’Imperio, Vincenzo, Casati, Gabriele, Pilla, Daniela, Malapelle, Umberto, Piga, Isabella, Bindi, Greta, Marando, Alessandro, Bonoldi, Emanuela, Dainese, Emanuele, Riefolo, Mattia, D’Errico, Antonia, Costantini, Matteo, Lugli, Alberto, Grassi, Stefano, Scarpa, Aldo, Dei Tos, Angelo Paolo, Pagni, Fabio, Eccher, A, Seminati, D, L’Imperio, V, Casati, G, Pilla, D, Malapelle, U, Piga, I, Bindi, G, Marando, A, Bonoldi, E, Dainese, E, Riefolo, M, D’Errico, A, Costantini, M, Lugli, A, Grassi, S, Scarpa, A, Dei Tos, A, Pagni, F, Eccher, Albino, Seminati, Davide, L’Imperio, Vincenzo, Casati, Gabriele, Pilla, Daniela, Malapelle, Umberto, Piga, Isabella, Bindi, Greta, Marando, Alessandro, Bonoldi, Emanuela, Dainese, Emanuele, Riefolo, Mattia, D’Errico, Antonia, Costantini, Matteo, Lugli, Alberto, Grassi, Stefano, Scarpa, Aldo, Dei Tos, Angelo Paolo, and Pagni, Fabio
- Abstract
In the molecular era, proper archival conditions within pathology laboratories are crucial, especially for formalin-fixed paraffin-embedded (FFPE) tissue specimens retrieved years after the original diagnosis. Indeed, improper preservation can impact the integrity of nucleic acids and protein antigens. This study evaluates the quality status of stored FFPE blocks using multilevel omics approaches. FFPE blocks from 45 Non-Small Cell Lung Carcinoma (NSCLC) cases were analyzed. The blocks were collected from six different pathology archives across Italy with distinct environmental characteristics. Nucleic acids’ quantity and quality, as well as protein antigens, were assessed using various techniques, including MALDI-MSI. RNA was quantitatively higher, but more fragmented, compared to DNA. DNA quantity and quality were suitable for molecular analyses in 94.4% and 62.3% of samples, respectively. RNA quantity was adequate across all samples, but it was optimal only in 22.3% of cases. DNA quality started to deteriorate after 6–8 years, whereas RNA quality diminished only after 10 years of storage. These data might suggest a particular DNA susceptibility to FFPE blocks conservation. Immunohistochemical intensity decreased significantly after 6–8 years of storage, and MALDI-MSI analysis revealed that younger tissue blocks contained more unique proteomic signals than the older ones. This study emphasizes the importance of proper FFPE archiving conditions for molecular analyses. Governance should prioritize attention to pathology archives to ensure quality preservation and optimize predictive testing. By elucidating the nuances of FFPE block storage, this research paves the way for enhanced molecular diagnostics and therapeutic insights regarding oncology and beyond.
- Published
- 2024
27. Digital pathology world tour
- Author
-
Paola Chiara Rizzo, Alessandro Caputo, Eddy Maddalena, Nicolò Caldonazzi, Ilaria Girolami, Angelo Paolo Dei Tos, Aldo Scarpa, Marta Sbaraglia, Matteo Brunelli, Stefano Gobbo, Stefano Marletta, Liron Pantanowitz, Vincenzo Della Mea, and Albino Eccher
- Subjects
Computer applications to medicine. Medical informatics ,R858-859.7 - Abstract
Objective Digital pathology (DP) is currently in the spotlight and is rapidly gaining ground, even though the history of this field spans decades. Despite great technological progress, the adoption of DP for routine clinical diagnostic use remains limited. Methods A systematic search was conducted in the electronic databases Pubmed-MEDLINE and Embase. Inclusion criteria were all published studies that encompassed any application of DP. Results Of 4888 articles retrieved, 4041 were included. Relevant articles were categorized as “diagnostic” (147/4041, 4%) where DP was utilized for routine diagnostic workflow and “non-diagnostic” (3894/4041, 96%) for all other applications. The “non-diagnostic” articles were further categorized according to DP application including “artificial intelligence” (33%), “education” (5%), “narrative” (17%) for reviews and editorials, and “technical” (45%) for pure research publications. Conclusion This manuscript provided temporal and geographical insight into the global adoption of DP by analyzing the published scientific literature.
- Published
- 2023
- Full Text
- View/download PDF
28. Pleural mesothelioma risk in the construction industry: a case–control study in Italy, 2000–2018
- Author
-
Stefania Curti, Stefano Mattioli, Dario Consonni, Sara Piro, Lucia Miligi, L Mangone, Maria Teresa Landi, Neil E Caporaso, Carolina Mensi, L Giovannetti, Elisabetta Chellini, Elisa Romeo, Alessandro Marinaccio, Antonella Stura, A Martini, Giovanni Brandi, Carlo Genova, M Gangemi, M Davoli, L Richiardi, P Michelozzi, G Serio, Luigi Vimercati, A Caputi, Enrica Migliore, AC Pesatori, L De Maria, Veronica Casotto, B Dallari, M Bonzini, U Fedeli, Alessandra Binazzi, Corrado Negro, Antonio Romanelli, Francesco Carrozza, Domenica Cavone, Federico Tallarigo, Massimo Melis, C Brentisci, M Gilardetti, C Storchi, O Sala, V Cacciarini, L Ancona, Sg Lio, G Frasca, Mc Giurdanella, C Martorana, P Rollo, E Spata, G Dardanoni, S Scondotto, S Stecchi, D Mirabelli, P De Michieli, Simona Stella, Carmela Gioscia, Silvia Eccher, Stefano Murano, Vera Comiati, Flavia D'Agostin, Lucia Benfatto, Iolanda Grappasonni, Gabriella Madeo, Ilaria Cozzi, Staniscia Tommaso, Michele Labianca, Giuseppe Cascone, D Di Marzio, S Rugarli, C Pascucci, A Balestri, MC Delfino, F Pentimone, and MR Angius
- Subjects
Medicine - Abstract
Objectives Workers in the construction industry have been exposed to asbestos in various occupations. In Italy, a National Mesothelioma Registry has been implemented more than 20 years ago. Using cases selected from this registry and exploiting existing control data sets, we estimated relative risks for pleural mesothelioma (PM) among construction workers.Design Case–control study.Setting Cases from the National Mesothelioma Registry (2000–2018), controls from three previous case–control studies.Methods We selected male PM incident cases diagnosed in 2000–2018. Population controls were taken from three studies performed in six Italian regions within two periods (2002–2004 and 2012–2016). Age-adjusted and period-adjusted unconditional logistic regression models were fitted to estimate odds ratios (OR) for occupations in the construction industry. We followed two approaches, one (primary) excluding and the other (secondary) including subjects employed in other non-construction blue collar occupations for >5 years. For both approaches, we performed an overall analysis including all cases and, given the incomplete temporal and geographic overlap of cases and controls, three time or/and space restricted sensitivity analyses.Results The whole data set included 15 592 cases and 2210 controls. With the primary approach (4797 cases and 1085 controls), OR was 3.64 (2181 cases) for subjects ever employed in construction. We found elevated risks for blue-collar occupations (1993 cases, OR 4.52), including bricklayers (988 cases, OR 7.05), general construction workers (320 cases, OR 4.66), plumbers and pipe fitters (305 cases, OR 9.13), painters (104 cases, OR 2.17) and several others. Sensitivity analyses yielded very similar findings. Using the secondary approach, we observed similar patterns, but ORs were remarkably lower.Conclusions We found markedly increased PM risks for most occupations in the construction industry. These findings are relevant for compensation of subjects affected with mesothelioma in the construction industry.
- Published
- 2023
- Full Text
- View/download PDF
29. The Puzzle of Preimplantation Kidney Biopsy Decision-Making Process: The Pathologist Perspective
- Author
-
Albino Eccher, Jan Ulrich Becker, Fabio Pagni, Giorgio Cazzaniga, Mattia Rossi, Giovanni Gambaro, Vincenzo L’Imperio, and Stefano Marletta
- Subjects
preimplantation kidney biopsy ,pathologist ,kidney transplant ,Science - Abstract
Kidney transplantation is the best treatment for end-stage renal disease since it offers the greatest survival benefit compared to dialysis. The gap between the number of renal transplants performed and the number of patients awaiting renal transplants leads to a steadily increasing pressure on the scientific community. Kidney preimplantation biopsy is used as a component of the evaluation of organ quality before acceptance for transplantation. However, the reliability and predictive value of biopsy data are controversial. Most of the previously proposed predictive models were not associated with graft survival, but what has to be reaffirmed is that histologic examination of kidney tissue can provide an objective window on the state of the organ that cannot be deduced from clinical records and renal functional studies. The balance of evidence indicates that reliable decisions about donor suitability must be made based on the overall picture. This work discusses recent trends that can reduce diagnostic timing and variability among players in the decision-making process that lead to kidney transplants, from the pathologist’s perspective.
- Published
- 2024
- Full Text
- View/download PDF
30. Ki-67 assessment of pancreatic neuroendocrine neoplasms: Systematic review and meta-analysis of manual vs. digital pathology scoring
- Author
-
Luchini, Claudio, Pantanowitz, Liron, Adsay, Volkan, Asa, Sylvia L., Antonini, Pietro, Girolami, Ilaria, Veronese, Nicola, Nottegar, Alessia, Cingarlini, Sara, Landoni, Luca, Brosens, Lodewijk A., Verschuur, Anna V., Mattiolo, Paola, Pea, Antonio, Mafficini, Andrea, Milella, Michele, Niazi, Muhammad K., Gurcan, Metin N., Eccher, Albino, Cree, Ian A., and Scarpa, Aldo
- Published
- 2022
- Full Text
- View/download PDF
31. Response to: Is the new ASNM intraoperative neuromonitoring supervision “guideline” a trustworthy guideline? A commentary
- Author
-
Gertsch, Jeffrey H, Moreira, Joseph J, Lee, George R, Hastings, John D, Ritzl, Eva, Eccher, Matthew Allan, Shils, Jay L, Balzer, Gene K, Balzer, Jeffrey R, Boucharel, Willy, Guo, Lanjun, Hanson, Leah L, Hemmer, Laura B, Jahangiri, Faisal R, Mendez Vigil, Jorge A, Vogel, Richard W, Wierzbowski, Lawrence R, Wilent, W Bryan, Zuccaro, James S, and Yingling, Charles D
- Subjects
Theology ,Philosophy and Religious Studies ,Psychology ,Intraoperative Neurophysiological Monitoring ,Monitoring ,Intraoperative ,Biomedical Engineering ,Clinical Sciences ,Anesthesiology ,Clinical sciences - Published
- 2019
32. Practice guidelines for the supervising professional: intraoperative neurophysiological monitoring
- Author
-
Gertsch, Jeffrey H, Moreira, Joseph J, Lee, George R, Hastings, John D, Ritzl, Eva, Eccher, Matthew Allan, Cohen, Bernard Allan, Shils, Jay L, McCaffrey, Michael T, Balzer, Gene K, Balzer, Jeffrey R, Boucharel, Willy, Guo, Lanjun, Hanson, Leah L, Hemmer, Laura B, Jahangiri, Faisal R, Mendez Vigil, Jorge A, Vogel, Richard W, Wierzbowski, Lawrence R, Wilent, W Bryan, Zuccaro, James S, and Yingling, Charles D
- Subjects
Biomedical and Clinical Sciences ,Clinical Sciences ,Humans ,Intraoperative Neurophysiological Monitoring ,Neurophysiological Monitoring ,Neurophysiology ,Organization and Administration ,Physicians ,Societies ,Medical ,United States ,Intraoperative neurophysiology ,Surgical neurophysiology ,Intraoperative neurophysiological monitoring ,Guideline ,American Society of Neurophysiological Monitoring ,membership of the ASNM ,Biomedical Engineering ,Anesthesiology ,Clinical sciences - Abstract
The American Society of Neurophysiological Monitoring (ASNM) was founded in 1989 as the American Society of Evoked Potential Monitoring. From the beginning, the Society has been made up of physicians, doctoral degree holders, Technologists, and all those interested in furthering the profession. The Society changed its name to the ASNM and held its first Annual Meeting in 1990. It remains the largest worldwide organization dedicated solely to the scientifically-based advancement of intraoperative neurophysiology. The primary goal of the ASNM is to assure the quality of patient care during procedures monitoring the nervous system. This goal is accomplished primarily through programs in education, advocacy of basic and clinical research, and publication of guidelines, among other endeavors. The ASNM is committed to the development of medically sound and clinically relevant guidelines for the performance of intraoperative neurophysiology. Guidelines are formulated based on exhaustive literature review, recruitment of expert opinion, and broad consensus among ASNM membership. Input is likewise sought from sister societies and related constituencies. Adherence to a literature-based, formalized process characterizes the construction of all ASNM guidelines. The guidelines covering the Professional Practice of intraoperative neurophysiological monitoring were initially published January 24th, 2013, and subsequently that document has undergone review and revision to accommodate broad inter- and intra-societal feedback. This current version of the ASNM Professional Practice Guideline was fully approved for publication according to ASNM bylaws on February 22nd, 2018, and thus overwrites and supersedes the initial guideline.
- Published
- 2019
33. PD‐L1 in oral squamous cell carcinoma: A key biomarker from the laboratory to the bedside
- Author
-
Riccardo Nocini, Matteo Vianini, Ilaria Girolami, Luca Calabrese, Aldo Scarpa, Maurizio Martini, Patrizia Morbini, Stefano Marletta, Matteo Brunelli, Gabriele Molteni, Anil Parwani, Liron Pantanowitz, and Albino Eccher
- Subjects
CD274 ,meta‐analysis ,oral cancer ,oral squamous cell carcinoma ,PD‐L1 ,programmed death‐ligand 1 ,Dentistry ,RK1-715 - Abstract
Abstract Objectives and background: Oral squamous cell carcinoma (OSCC) is a highly malignant disease with an increasing incidence. The need to improve therapeutic strategies for patients affected by OSCC is an urgent challenge. Currently, the advent of immunotherapy represents an important step toward this aim. Programmed cell death‐ligand 1 (PD‐L1), a membrane protein that can be expressed on tumor and inflammatory cells is a key biomarker whose expression is determined by means of immunohistochemistry and is necessary for selecting patients for immunotherapy. Methods: In this study, we review the methods of PD‐L1 assessment and outcomes achieved with immunotherapy in the treatment of OSCC patients. Results: Based on a meta‐analysis we demonstrate a lack of prognostic significance of PD‐L1 in OSCC. Conclusions: We also highlight unresolved issues including difficulties in standardizing PD‐L1 evaluation and discuss future opportunities such as leveraging digital pathology.
- Published
- 2022
- Full Text
- View/download PDF
34. Artificial intelligence in head and neck cancer diagnosis
- Author
-
Bassani, Sara, Santonicco, Nicola, Eccher, Albino, Scarpa, Aldo, Vianini, Matteo, Brunelli, Matteo, Bisi, Nicola, Nocini, Riccardo, Sacchetto, Luca, Munari, Enrico, Pantanowitz, Liron, Girolami, Ilaria, and Molteni, Gabriele
- Published
- 2022
- Full Text
- View/download PDF
35. Validation of portable tablets for transplant pathology diagnosis according to the College of American Pathologists’ Guidelines
- Author
-
Marletta, Stefano, Pantanowitz, Liron, Malvi, Deborah, Novelli, Luca, Mescoli, Claudia, Cardillo, Massimo, D'Errico, Antonietta, Girolami, Ilaria, and Eccher, Albino
- Published
- 2022
- Full Text
- View/download PDF
36. Diagnostic Biomarkers in Renal Cell Tumors According to the Latest WHO Classification: A Focus on Selected New Entities
- Author
-
Sanguedolce, Francesca, primary, Mazzucchelli, Roberta, additional, Falagario, Ugo Giovanni, additional, Cormio, Angelo, additional, Zanelli, Magda, additional, Palicelli, Andrea, additional, Zizzo, Maurizio, additional, Eccher, Albino, additional, Brunelli, Matteo, additional, Galosi, Andrea Benedetto, additional, Carrieri, Giuseppe, additional, and Cormio, Luigi, additional
- Published
- 2024
- Full Text
- View/download PDF
37. Forensic value of soft tissue detachments from the hyoid bone in death due to strangulation asphyxia
- Author
-
Del Balzo, Giovanna, primary, Pelletti, Guido, additional, Raniero, Dario, additional, Farinelli, Alessia, additional, Uberti, Andrea, additional, Vermiglio, Elisa, additional, Molteni, Gabriele, additional, Nocini, Riccardo, additional, Gobbo, Stefano, additional, Taus, Francesco, additional, Eccher, Albino, additional, Lucchini, Claudio, additional, and Brunelli, Matteo, additional
- Published
- 2024
- Full Text
- View/download PDF
38. Highly luminescent liquid crystals by connecting 1,3,4-oxadiazole with thiazolo[5,4-d]thiazole units
- Author
-
Santos, Arthur B.S., Manfredi, Alex M., Salla, Cristian A.M., Farias, Giliandro, Girotto, Edivandro, Eccher, Juliana, Westphal, Eduard, Curcio, Sergio F., Cazati, Thiago, Malvestiti, Ivani, Falcão, Eduardo H.L., Bechtold, Ivan H., and Gallardo, Hugo
- Published
- 2021
- Full Text
- View/download PDF
39. The Puzzle of Preimplantation Kidney Biopsy Decision-Making Process: The Pathologist Perspective
- Author
-
Eccher, A, Becker, J, Pagni, F, Cazzaniga, G, Rossi, M, Gambaro, G, L'Imperio, V, Marletta, S, Becker, JU, Eccher, A, Becker, J, Pagni, F, Cazzaniga, G, Rossi, M, Gambaro, G, L'Imperio, V, Marletta, S, and Becker, JU
- Abstract
Kidney transplantation is the best treatment for end-stage renal disease since it offers the greatest survival benefit compared to dialysis. The gap between the number of renal transplants performed and the number of patients awaiting renal transplants leads to a steadily increasing pressure on the scientific community. Kidney preimplantation biopsy is used as a component of the evaluation of organ quality before acceptance for transplantation. However, the reliability and predictive value of biopsy data are controversial. Most of the previously proposed predictive models were not associated with graft survival, but what has to be reaffirmed is that histologic examination of kidney tissue can provide an objective window on the state of the organ that cannot be deduced from clinical records and renal functional studies. The balance of evidence indicates that reliable decisions about donor suitability must be made based on the overall picture. This work discusses recent trends that can reduce diagnostic timing and variability among players in the decision-making process that lead to kidney transplants, from the pathologist’s perspective.
- Published
- 2024
40. Digital Pathology Applications for PD-L1 Scoring in Head and Neck Squamous Cell Carcinoma: A Challenging Series
- Author
-
Canini, V, Eccher, A, D'Amati, G, Fusco, N, Maffini, F, Lepanto, D, Martini, M, Cazzaniga, G, Paliogiannis, P, Lobrano, R, L'Imperio, V, Pagni, F, d'Amati, G, Canini, V, Eccher, A, D'Amati, G, Fusco, N, Maffini, F, Lepanto, D, Martini, M, Cazzaniga, G, Paliogiannis, P, Lobrano, R, L'Imperio, V, Pagni, F, and d'Amati, G
- Abstract
The assessment of programmed death-ligand 1 (PD-L1) combined positive scoring (CPS) in head and neck squamous cell carcinoma (HNSCC) is challenged by pre-analytical and inter-observer variabilities. An educational program to compare the diagnostic performances between local pathologists and a board of pathologists on 11 challenging cases from different Italian pathology centers stained with PD-L1 immunohistochemistry on a digital pathology platform is reported. A laboratory-developed test (LDT) using both 22C3 (Dako) and SP263 (Ventana) clones on Dako or Ventana platforms was compared with the companion diagnostic (CDx) Dako 22C3 pharm Dx assay. A computational approach was performed to assess possible correlations between stain features and pathologists’ visual assessments. Technical discordances were noted in five cases (LDT vs. CDx, 45%), due to an abnormal nuclear/cytoplasmic diaminobenzidine (DAB) stain in LDT (n = 2, 18%) and due to variation in terms of intensity, dirty background, and DAB droplets (n = 3, 27%). Interpretative discordances were noted in six cases (LDT vs. CDx, 54%). CPS remained unchanged, increased, or decreased from LDT to CDx in three (27%) cases, two (18%) cases, and one (9%) case, respectively, around relevant cutoffs (1 and 20, k = 0.63). Differences noted in DAB intensity/distribution using computational pathology partly explained the LDT vs. CDx differences in two cases (18%). Digital pathology may help in PD-L1 scoring, serving as a second opinion consultation platform in challenging cases. Computational and artificial intelligence tools will improve clinical decision-making and patient outcomes.
- Published
- 2024
41. Comparing deep learning and pathologist quantification of cell-level PD-L1 expression in non-small cell lung cancer whole-slide images
- Author
-
Eekelen, L. van, Spronck, J.M.A., Looijen-Salamon, M.G., Vos, S., Munari, E., Girolami, I., Eccher, A., Acs, B., Boyaci, C., Silva de Souza, G., Demirel-Andishmand, M., Meesters, L.D., Zegers, D., Woude, L.L. van der, Theelen, W., Heuvel, M. van den, Grünberg, K., Ginneken, B. van, Laak, J.A.W.M. van der, Ciompi, F., Eekelen, L. van, Spronck, J.M.A., Looijen-Salamon, M.G., Vos, S., Munari, E., Girolami, I., Eccher, A., Acs, B., Boyaci, C., Silva de Souza, G., Demirel-Andishmand, M., Meesters, L.D., Zegers, D., Woude, L.L. van der, Theelen, W., Heuvel, M. van den, Grünberg, K., Ginneken, B. van, Laak, J.A.W.M. van der, and Ciompi, F.
- Abstract
Contains fulltext : 305495.pdf (Publisher’s version ) (Open Access), Programmed death-ligand 1 (PD-L1) expression is currently used in the clinic to assess eligibility for immune-checkpoint inhibitors via the tumor proportion score (TPS), but its efficacy is limited by high interobserver variability. Multiple papers have presented systems for the automatic quantification of TPS, but none report on the task of determining cell-level PD-L1 expression and often reserve their evaluation to a single PD-L1 monoclonal antibody or clinical center. In this paper, we report on a deep learning algorithm for detecting PD-L1 negative and positive tumor cells at a cellular level and evaluate it on a cell-level reference standard established by six readers on a multi-centric, multi PD-L1 assay dataset. This reference standard also provides for the first time a benchmark for computer vision algorithms. In addition, in line with other papers, we also evaluate our algorithm at slide-level by measuring the agreement between the algorithm and six pathologists on TPS quantification. We find a moderately low interobserver agreement at cell-level level (mean reader-reader F1 score = 0.68) which our algorithm sits slightly under (mean reader-AI F1 score = 0.55), especially for cases from the clinical center not included in the training set. Despite this, we find good AI-pathologist agreement on quantifying TPS compared to the interobserver agreement (mean reader-reader Cohen's kappa = 0.54, 95% CI 0.26-0.81, mean reader-AI kappa = 0.49, 95% CI 0.27-0.72). In conclusion, our deep learning algorithm demonstrates promise in detecting PD-L1 expression at a cellular level and exhibits favorable agreement with pathologists in quantifying the tumor proportion score (TPS). We publicly release our models for use via the Grand-Challenge platform.
- Published
- 2024
42. TROP-2, NECTIN-4 and predictive biomarkers in sarcomatoid and rhabdoid bladder urothelial carcinoma
- Author
-
Brunelli, M., Gobbo, S., Malpeli, G., Sirgiovanni, G., Caserta, C., Munari, E., Francesconi, S., Calio, A., Martignoni, G., Cimadamore, A., Veccia, A., Antonelli, A., Tucci, M., Pierconti, Francesco, Hattab, I. M., Eccher, A., Ascani, S., Milella, M., Buffoni, L., Cheng, L., Bracarda, S., Pierconti F. (ORCID:0000-0003-0951-4131), Brunelli, M., Gobbo, S., Malpeli, G., Sirgiovanni, G., Caserta, C., Munari, E., Francesconi, S., Calio, A., Martignoni, G., Cimadamore, A., Veccia, A., Antonelli, A., Tucci, M., Pierconti, Francesco, Hattab, I. M., Eccher, A., Ascani, S., Milella, M., Buffoni, L., Cheng, L., Bracarda, S., and Pierconti F. (ORCID:0000-0003-0951-4131)
- Abstract
Introduction. The surface protein TROP-2/TACSTD2 and the cell adhesion protein NECTIN-4/NECTIN4 are responsible for the efficacy of anticancer therapies based on antibody- drug conjugates (ADC) targeting intracellular microtubules. In contrast with common histologic subtypes of bladder urothelial carcinoma (BUC), little is known of TROP-2 and NECTIN-4 expression in sarcomatoid and rhabdoid BUC. Aims. In this study, we aimed to analyze TROP-2 and NECTIN-4 expression and additional predictive biomarkers by immunohistochemistry and fluorescence in situ hybridization (FISH) on 35 undifferentiated BUC (28 sarcomatoid and 7 rhabdoid). Wide genomic investigation was also performed on 411 BUC cases of the PanCancer Atlas, focusing on genes related to the microtubule pathways. Results. Seven of 35 (20%) undifferentiated BUC showed expression of TROP-2. NECTIN-4 was expressed in 10 cases (29%). Seven cases (20%) co-expressed TROP-2 and NECTIN-4. HER-2 FISH was amplified in 5 cases (14%) while HER-2 immunoexpression was observed in 14 cases (40%). PD-L1 scored positive for combined proportion score (CPS) in 66% of cases and for tumor proportion score (TPS) in 51% of cases. Pan-NTRK1-2/3 was elevated in 9 cases (26%) and FGFR-2/3 was broken in 7 of 35 cases (20%). Of 28 sarcomatoid BUC, 9 (32%) were negative for all (TROP-2, NECTIN-4, PD-L1, HER-2, FGFR and pan-NTRK) biomarkers and 3 (11%) expressed all five biomarkers. Among cases with rhabdoid dedifferentiation, 1 of 7 (14%) showed activation of all biomarkers, whereas 2 of 7 (28%) showed none. The mRNA analysis identified microtubulerelated genes and pathways suitable for combined ADC treatments in BUC. Conclusion. Sarcomatoid and rhabdoid BUC do harbor positive expression of the ADC targets TROP-2 or NECTIN-4 in a relatively modest subset of cases, whereas the majority do not. Different combinations of other positive biomarkers may help the choice of medical therapies. Overall, these findings have important clinical implica
- Published
- 2024
43. Expatriates' salary expectations, age, experience and country image
- Author
-
Duarte, Henrique, de Eccher, Umberto, and Brewster, Chris
- Published
- 2021
- Full Text
- View/download PDF
44. Comparison of three validated PD-L1 immunohistochemical assays in urothelial carcinoma of the bladder: interchangeability and issues related to patient selection
- Author
-
Enrico Munari, Giulia Querzoli, Matteo Brunelli, Marcella Marconi, Marco Sommaggio, Marco A. Cocchi, Guido Martignoni, George J. Netto, Anna Caliò, Linda Quatrini, Francesca R. Mariotti, Claudio Luchini, Ilaria Girolami, Albino Eccher, Diego Segala, Francesco Ciompi, Giuseppe Zamboni, Lorenzo Moretta, and Giuseppe Bogina
- Subjects
PD-L1 ,immunohistochemistry ,assays ,comparison ,urothelial ,bladder ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Different programmed cell death-ligand 1 (PD-L1) assays and scoring algorithms are being used in the evaluation of PD-L1 expression for the selection of patients for immunotherapy in specific settings of advanced urothelial carcinoma (UC). In this paper, we sought to investigate three approved assays (Ventana SP142 and SP263, and Dako 22C3) in UC with emphasis on implications for patient selection for atezolizumab/pembrolizumab as the first line of treatment. Tumors from 124 patients with invasive UC of the bladder were analyzed using tissue microarrays (TMA). Serial sections were stained with SP263 and SP142 on Ventana Benchmark Ultra and with 22C3 on Dako Autostainer Link 48. Stains were evaluated independently by two observers and scored using the combined positive score (CPS) and tumor infiltrating immune cells (IC) algorithms. Differences in proportions (DP), overall percent agreement (OPA), positive percent agreement (PPA), negative percent agreement (NPA), and Cohen κ were calculated for all comparable cases. Good overall concordance in analytic performance was observed for 22C3 and SP263 with both scoring algorithms; specifically, the highest OPA was observed between 22C3 and SP263 (89.6%) when using CPS. On the other hand, SP142 consistently showed lower positivity rates with high differences in proportions (DP) compared with 22C3 and SP263 with both CPS and IC, and with a low PPA, especially when using the CPS algorithm. In conclusion, 22C3 and SP263 assays show comparable analytical performance while SP142 shows divergent staining results, with important implications for the selection of patients for both pembrolizumab and atezolizumab.
- Published
- 2022
- Full Text
- View/download PDF
45. Frozen section telepathology service: Efficiency and benefits of an e-health policy in South Tyrol
- Author
-
Ilaria Girolami, Stefania Neri, Albino Eccher, Matteo Brunelli, Mattew Hanna, Liron Pantanowitz, Esther Hanspeter, and Guido Mazzoleni
- Subjects
Computer applications to medicine. Medical informatics ,R858-859.7 - Abstract
Objective/Background Telepathology has been widely adopted to allow intraoperative pathology examinations to be performed remotely and for obtaining second opinion teleconsultation. In the Italian northern region of South Tyrol, the widespread geographical distances and consequent cost for the health system of having a travelling pathologist cover intraoperative consultations in peripheral hospitals was a key driver for the implementation of a telepathology system. Methods In 2010, four Menarini D-Sight whole slide scanners to digitize entire pathology slides were placed in the peripheral hospitals of Merano, Bressanone, Brunico, and in the hub hospital of Bolzano. Digital workstations were also installed to allow pathologists to remotely perform intraoperative consultations with digital slides. This study reviews the outcome after 12 years of telepathology for this intended clinical use. Results After an initial validation phase with 100 cases which yielded a sensitivity of 65% (CI 43–84%) and specificity of 100% (CI 95–100%), there were 2058 intraoperative consultations handled by telepathology. The cases evaluated were mainly breast sentinel lymph nodes, followed by urological, gynecological and general surgical pathology frozen section specimens. There were no false-positive cases and 165 (8%) false-negative cases, yielding an overall sensitivity and specificity of 65% (CI 61–69%) and 100% (CI 99–100%), respectively. Conclusion Telepathology is reliable for remote intraoperative diagnosis and, despite technical issues and initial acquaintance issues, proved beneficial for patient care in satellite hospitals, improved standardization, promoted innovation, and resulted in cost savings for the health system.
- Published
- 2022
- Full Text
- View/download PDF
46. Technical and Diagnostic Issues in Whole Slide Imaging Published Validation Studies
- Author
-
Paola Chiara Rizzo, Ilaria Girolami, Stefano Marletta, Liron Pantanowitz, Pietro Antonini, Matteo Brunelli, Nicola Santonicco, Paola Vacca, Nicola Tumino, Lorenzo Moretta, Anil Parwani, Swati Satturwar, Albino Eccher, and Enrico Munari
- Subjects
whole slide imaging ,digital pathology ,validation study ,systematic (literature) reviews ,artificial intelligence ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
ObjectiveDigital pathology with whole-slide imaging (WSI) has many potential clinical and non-clinical applications. In the past two decades, despite significant advances in WSI technology adoption remains slow for primary diagnosis. The aim of this study was to identify common pitfalls of WSI reported in validation studies and offer measures to overcome these challenges.MethodsA systematic search was conducted in the electronic databases Pubmed-MEDLINE and Embase. Inclusion criteria were all validation studies designed to evaluate the feasibility of WSI for diagnostic clinical use in pathology. Technical and diagnostic problems encountered with WSI in these studies were recorded.ResultsA total of 45 studies were identified in which technical issues were reported in 15 (33%), diagnostic issues in 8 (18%), and 22 (49%) reported both. Key technical problems encompassed slide scan failure, prolonged time for pathologists to review cases, and a need for higher image resolution. Diagnostic challenges encountered were concerned with grading dysplasia, reliable assessment of mitoses, identification of microorganisms, and clearly defining the invasive front of tumors.ConclusionDespite technical advances with WSI technology, some critical concerns remain that need to be addressed to ensure trustworthy clinical diagnostic use. More focus on the quality of the pre-scanning phase and training of pathologists could help reduce the negative impact of WSI technical difficulties. WSI also seems to exacerbate specific diagnostic tasks that are already challenging among pathologists even when examining glass slides with conventional light microscopy.
- Published
- 2022
- Full Text
- View/download PDF
47. Gender Differences in Sinonasal Cancer Incidence: Data from the Italian Registry.
- Author
-
Binazzi, Alessandra, di Marzio, Davide, Mensi, Carolina, Consonni, Dario, Miligi, Lucia, Piro, Sara, Zajacovà, Jana, Sorasio, Denise, Galli, Paolo, Camagni, Angela, Calisti, Roberto, Massacesi, Stefania, Cozzi, Ilaria, Balestri, Anna, Murano, Stefano, Fedeli, Ugo, Comiati, Vera, Eccher, Silvia, Lattanzio, Sara, and Marinaccio, Alessandro
- Subjects
PARANASAL sinus cancer ,PUBLIC health surveillance ,ADENOCARCINOMA ,SQUAMOUS cell carcinoma ,STOMACH tumors ,RESEARCH funding ,SEX distribution ,REPORTING of diseases ,AGE distribution ,OCCUPATIONAL exposure ,RESEARCH methodology - Abstract
Simple Summary: Sinonasal cancer (SNC) is strongly associated with occupational exposure to several carcinogens involved in SNC's etiology, which vary by gender. Gender differences in SNC cases were examined through the Italian sinonasal cancer registry. Male-to-female incidence differences are neglectable in the youngest age classes but increase in older age classes, probably as a result of more men being diagnosed with SNC due to their greater occupational exposure to carcinogens (mostly wood and leather dusts) compared with women. Occupational exposures to carcinogens were the most frequent in both genders. A high percentage of women had unlikely exposures. Gender differences deserve more deep investigation, starting with a review of diagnostic processes and occupational history taking. Background: Although rare, sinonasal cancers (SNCs) have a high occupational attributable fraction. Methods: We applied gender-based approaches to descriptive analyses, incidence, and patterns of exposures using the Italian National Sinonasal Cancer Registry (ReNaTuNS: Registro Nazionale Tumori Naso-Sinusali). Results: The study included 2851 SNC patients. SNC was diagnosed more often in men (73%) than in women (27%). The most frequent morphology in men was intestinal-type adenocarcinoma (33%), whereas in women, it was squamous cell carcinoma (49%). Nasal cavities were predominant in both genders (50%), ethmoidal sinus in men (24%), and maxillary in women (24%). Incidence rates were 0.76 (per 100,000 person-years) in men and 0.24 in women and increased by age, more evidently in men, peaking over 75 years in both. Occupational exposures to wood and leather dusts were the most frequent (41% for men, 33% for women). Few exposures were extra-occupational or domestic. Unlikely exposure was relevant in women (57%). Conclusions: The surveillance of SNC cases through a registry that allows for the identification of and compensation for this occupational disease is important in Italy, where numerous workers are exposed to carcinogens for SNC, without even being aware. Considering the rarity of the disease, particularly among women, the ReNaTuNS can provide a method to analyze gender differences. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
48. Ki67/MART1 and p63/SOX10 dual immunohistochemistry allows a correct interpretation of the melanocytic component in the diagnosis of pigmented pilomatricoma
- Author
-
Serena Ammendola, Elena Bariani, Vassilena Tsvetkova, Paolo Gisondi, Paolo Rosina, Ilaria Girolami, Michele Coato, Matteo Brunelli, Albino Eccher, and Chiara Colato
- Subjects
atypical melanocytes ,dual immunohistochemistry ,pigmented pilomatricoma ,pilomatricoma ,Dermatology ,RL1-803 - Abstract
Pilomatricoma is a relatively common benign cutaneous adnexal tumor and a well-recognized entity, while its pigmented variant is far less common and less reported. Its estimated frequency ranges from 11 to 24%, according to a limited number of published case series. This article describes the case of a 42-year-old man presenting a firm subcutaneous nodule of the periareolar region. Histopathologic examination revealed a cystic lesion composed of matrical and supramatrical cells accompanied by a foreign body granulomatous cell reaction. Interestingly, a hyperpigmented area with numerous hyperplastic melanocytes and few mitoses was detectable. In order to assess the cell lineage of the mitotically active component in the hyperpigmented area, double immunohistochemistry with Ki67/Mart1 and p63/SOX10 was performed. Pigmented pilomatricoma is an underrecognized, underreported variant, and double immunohistochemistry stain is an effective tool in providing the correct interpretation of the proliferative activity in the different cellular populations.
- Published
- 2021
- Full Text
- View/download PDF
49. Very High Negative Concordance Rate of RT-PCR for SARS-CoV-2 in Nasopharyngeal Swab and Tracheo-Bronchial Aspirate in Children
- Author
-
Anna Camporesi, Annalisa De Silvestri, Veronica Diotto, Stefania Ferrario, Laura Eccher, Alessandra De Ferrari, Francesco Messina, Gloria Pelizzo, Davide Mileto, Valeria Calcaterra, and Danilo Buonsenso
- Subjects
SARS-CoV-2 ,naso-pharyngeal swab ,tracheo-bronchial aspirate ,children ,RT-PCR-Real-Time PCR ,Pediatrics ,RJ1-570 - Abstract
Reliable testing methods for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in children are essential to allow normal activities. Diagnosis of SARS-CoV-2 infection is currently based on real-time reverse transcriptase-polymerase chain reaction (RT-PCR) performed on nasopharyngeal (NP) swabs; concerns have been raised regarding NP swab accuracy in children to detect the virus because of potential lack of cooperation of the patients or due to general uncertainties about concordance between high and low respiratory tract specimens in children. The aim of the study (IRB approval: ST/2020/405) is to prospectively compare RT-PCR results on NP and tracheo-bronchial aspirate (TA) in children admitted to the hospital for surgery or admitted to the Pediatric Intensive Care Unit (PICU) of a tertiary children hospital in Milano, Italy, during a peak of COVID-19 infections in the city. A total of 385 patients were enrolled in the study: 364 from surgical theater and 21 from PICU. Two patients (0.5%) tested positive on TA and were negative on NP; both cases occurred in November 2020, during a peak of infection in the city. Specificity of NP swab was.995 (95% CI: 0.980–0.999). Two patients with positive NP swabs tested negative on TA.ConclusionOur study shows that the specificity of SARS-CoV-2 RT-PCR on TA swab, compared to results of SARS-CoV-2 RT-PCR on NP, was very high for negative cases in our pediatric cohort during a period of high epidemiological pressure.
- Published
- 2022
- Full Text
- View/download PDF
50. Postoperative apnea after pyloromyotomy for infantile hypertrophic pyloric stenosis
- Author
-
Marco Gemma, Anna Camporesi, Veronica Diotto, Elena Zoia, Simone Rotta, Federica Tarantino, Laura Maria Giuditta Eccher, Valeria Calcaterra, and Gloria Pelizzo
- Subjects
Pediatrics ,RJ1-570 ,Surgery ,RD1-811 - Published
- 2022
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.