646 results on '"Carugati A."'
Search Results
2. Governance Archaeology : Research as Ancestry
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Carugati, Federica and Schneider, Nathan
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- 2023
3. The exploration of users’ perceived value from personalization and virtual conversational agents to enable a smart home assemblage– A mixed method approach
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Hubert, Marco, Kazemi, Shahab, Hubert, Mirja, Carugati, Andrea, and Mariani, Marcello M.
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- 2025
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4. Chromosomal mapping of ribosomal clusters and telomeric sequences (TTAGG)n in nine species of lobsters (Crustacea, Decapoda)
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S. Salvadori, F. Deidda, L. Carugati, R. Melis, E. Costa, M. Sibiriu, and E. Coluccia
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Decapoda ,FISH ,(TTAGG)n ,interstitial telomeric sequences (ITSs) ,28S rDNA ,5S rDNA ,Zoology ,QL1-991 - Abstract
AbstractLobsters are ubiquitous, economically important decapod crustaceans with apparently conflicting evolutionary relationships. Here, we describe the chromosomal location of the major (45S rDNA) and minor (5S rDNA) ribosomal gene families in four species of Astacidea and five of Achelata, using two-color FISH. The major ribosomal family is located in 4–16 sites per diploid chromosome set, with Nephrops norvegicus (Nephropidae) showing the highest number described so far in Decapoda. The 5S rDNA is located in two sites in eight species; only in the crayfish Procambarus clarkii the 5S FISH signals were detected in four sites together with additional weaker signals. Furthermore, in N. norvegicus the minor ribosomal genes are syntenic with one major ribosomal cluster. Moreover, we located by two-color FISH the pentanucleotide (TTAGG)n telomeric repeat in the Nephropidae studied, showing the occurrence of a colocalization with 45S ribosomal sequences in Homarus gammarus. The comparison of chromosomal locations of repetitive sequences in Mediterranean, Atlantic, and South African lobster species as well as in marine and freshwater ones provides information on chromosomal evolution and cytotaxonomy of Decapoda.
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- 2023
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5. Toward Trustworthy AI Development: Mechanisms for Supporting Verifiable Claims
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Brundage, Miles, Avin, Shahar, Wang, Jasmine, Belfield, Haydn, Krueger, Gretchen, Hadfield, Gillian, Khlaaf, Heidy, Yang, Jingying, Toner, Helen, Fong, Ruth, Maharaj, Tegan, Koh, Pang Wei, Hooker, Sara, Leung, Jade, Trask, Andrew, Bluemke, Emma, Lebensold, Jonathan, O'Keefe, Cullen, Koren, Mark, Ryffel, Théo, Rubinovitz, JB, Besiroglu, Tamay, Carugati, Federica, Clark, Jack, Eckersley, Peter, de Haas, Sarah, Johnson, Maritza, Laurie, Ben, Ingerman, Alex, Krawczuk, Igor, Askell, Amanda, Cammarota, Rosario, Lohn, Andrew, Krueger, David, Stix, Charlotte, Henderson, Peter, Graham, Logan, Prunkl, Carina, Martin, Bianca, Seger, Elizabeth, Zilberman, Noa, hÉigeartaigh, Seán Ó, Kroeger, Frens, Sastry, Girish, Kagan, Rebecca, Weller, Adrian, Tse, Brian, Barnes, Elizabeth, Dafoe, Allan, Scharre, Paul, Herbert-Voss, Ariel, Rasser, Martijn, Sodhani, Shagun, Flynn, Carrick, Gilbert, Thomas Krendl, Dyer, Lisa, Khan, Saif, Bengio, Yoshua, and Anderljung, Markus
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Computer Science - Computers and Society - Abstract
With the recent wave of progress in artificial intelligence (AI) has come a growing awareness of the large-scale impacts of AI systems, and recognition that existing regulations and norms in industry and academia are insufficient to ensure responsible AI development. In order for AI developers to earn trust from system users, customers, civil society, governments, and other stakeholders that they are building AI responsibly, they will need to make verifiable claims to which they can be held accountable. Those outside of a given organization also need effective means of scrutinizing such claims. This report suggests various steps that different stakeholders can take to improve the verifiability of claims made about AI systems and their associated development processes, with a focus on providing evidence about the safety, security, fairness, and privacy protection of AI systems. We analyze ten mechanisms for this purpose--spanning institutions, software, and hardware--and make recommendations aimed at implementing, exploring, or improving those mechanisms.
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- 2020
6. Prevalence and risk factors for human leptospirosis at a hospital serving a pastoralist community, Endulen, Tanzania.
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Michael J Maze, Gabriel M Shirima, Abdul-Hamid S Lukambagire, Rebecca F Bodenham, Matthew P Rubach, Shama Cash-Goldwasser, Manuela Carugati, Kate M Thomas, Philoteus Sakasaka, Nestory Mkenda, Kathryn J Allan, Rudovick R Kazwala, Blandina T Mmbaga, Joram J Buza, Venance P Maro, Renee L Galloway, Daniel T Haydon, John A Crump, and Jo E B Halliday
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Arctic medicine. Tropical medicine ,RC955-962 ,Public aspects of medicine ,RA1-1270 - Abstract
BackgroundLeptospirosis is suspected to be a major cause of illness in rural Tanzania associated with close contact with livestock. We sought to determine leptospirosis prevalence, identify infecting Leptospira serogroups, and investigate risk factors for leptospirosis in a rural area of Tanzania where pastoralist animal husbandry practices and sustained livestock contact are common.MethodsWe enrolled participants at Endulen Hospital, Tanzania. Patients with a history of fever within 72 hours, or a tympanic temperature of ≥38.0°C were eligible. Serum samples were collected at presentation and 4-6 weeks later. Sera were tested using microscopic agglutination testing with 20 Leptospira serovars from 17 serogroups. Acute leptospirosis cases were defined by a ≥four-fold rise in antibody titre between acute and convalescent serum samples or a reciprocal titre ≥400 in either sample. Leptospira seropositivity was defined by a single reciprocal antibody titre ≥100 in either sample. We defined the predominant reactive serogroup as that with the highest titre. We explored risk factors for acute leptospirosis and Leptospira seropositivity using logistic regression modelling.ResultsOf 229 participants, 99 (43.2%) were male and the median (range) age was 27 (0, 78) years. Participation in at least one animal husbandry practice was reported by 160 (69.9%). We identified 18 (7.9%) cases of acute leptospirosis, with Djasiman 8 (44.4%) and Australis 7 (38.9%) the most common predominant reactive serogroups. Overall, 69 (30.1%) participants were Leptospira seropositive and the most common predominant reactive serogroups were Icterohaemorrhagiae (n = 20, 29.0%), Djasiman (n = 19, 27.5%), and Australis (n = 17, 24.6%). Milking cattle (OR 6.27, 95% CI 2.24-7.52) was a risk factor for acute leptospirosis, and milking goats (OR 2.35, 95% CI 1.07-5.16) was a risk factor for Leptospira seropositivity.ConclusionsWe identified leptospirosis in approximately one in twelve patients attending hospital with fever from this rural community. Interventions that reduce risks associated with milking livestock may reduce human infections.
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- 2023
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7. Caractéristiques rythmiques du chant de l'indri et nouvelles perspectives pour une évaluation comparative du rythme chez les primates non humains
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Marco Gamba, Valeria Torti, Chiara De Gregorio, Teresa Raimondi, Longondraza Miaretsoa, Filippo Carugati, Walter Cristiano, Rose M. Randrianarison, Giovanna Bonadonna, Anna Zanoli, Olivier Friard, Daria Valente, Andrea Ravignani, and Cristina Giacoma
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Lemurs ,singing primates ,vocal communication rhythm ,musical abilities ,Science ,Zoology ,QL1-991 - Abstract
Since the discovery that rhythmic abilities are universal in humans, temporal features of vocal communication have greatly interested researchers studying animal communication. Rhythmic patterns are a valuable tool for species discrimination, mate choice, and individual recognition. A recent study showed that bird songs and human music share rhythmic categories when a signal's temporal intervals are distributed categorically rather than uniformly. Following that study, we aimed to investigate whether songs of indris (Indri indri), the only singing lemur, may show similar features. We measured the inter-onset intervals (tk), delimited by the onsets of two consecutive units, and the rhythmic ratios between these intervals (rk), calculated by dividing an interval by itself plus its adjacent, and finded a three-cluster distribution. Two clusters corresponded to rhythmic categories at 1:1 and 1:2, and the third approached a 2:1 ratio. Our results demonstrated for the first time that another primate besides humans produces categorical rhythms, an ability likely evolved convergently among singing species such as songbirds, indris, and humans. Understanding which communicative features are shared with other species is fundamental to understanding how they have evolved. In this regard, thanks to the simplicity of data processing and interpretation, our study relied on an accessible analytical approach that could open up new branches of the investigation into primate communication, leading the way to reconstruct a phylogeny of rhythm abilities across the entire order.
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- 2023
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8. Commercial sharks under scrutiny: Baseline genetic distinctiveness supports structured populations of small-spotted catsharks in the Mediterranean Sea
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Riccardo Melis, Laura Vacca, Alessia Cariani, Laura Carugati, Alessandro Cau, Charis Charilaou, Simone Di Crescenzo, Alice Ferrari, Maria Cristina Follesa, Farid Hemida, Sarah Helyar, Sabrina Lo Brutto, Letizia Sion, Fausto Tinti, and Rita Cannas
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genetic assessment ,reference baseline ,elasmobranchs ,microsatellites ,Mediterranean Sea ,population structure ,Science ,General. Including nature conservation, geographical distribution ,QH1-199.5 - Abstract
The present study, based on microsatellite markers, describes a population genetic analysis of the small-spotted catshark Scyliorhinus canicula (Linnaeus, 1758), representing one of the most abundant and commonly caught cartilaginous fishes in the Mediterranean Sea and adjacent areas. The analyses were performed to unravel the genetic features (variability, connectivity, sex-biased dispersal) of their relative geographic populations, both at the small (around the coast of Sardinia, Western Mediterranean Sea) and at a larger spatial scale (pan-Mediterranean level and between the Atlantic Ocean and the Mediterranean Sea). Individual clustering, multivariate and variance analyses rejected the hypothesis of genetic homogeneity, with significant genetic differences mainly within the Mediterranean between the Western and Eastern basins, as well as between the Mediterranean and the NE Atlantic Ocean. In detail, our results seem to confirm that the Strait of Gibraltar could not represent a complete barrier to the exchange of individuals of small-spotted catshark between the Atlantic Ocean and the Mediterranean Sea. In the latter area, a complex genetic structuring for S. canicula was found. Apart from differences among the Western, Eastern and Adriatic sites, within the Western basin the small-spotted catsharks around Sardinian waters are strongly differentiated from all others (both from the eastern Tyrrhenian Sea and southernmost part of the Algerian basin) and are demographically stable. Several possible mechanisms, both biological and abiotic (e.g., migratory behavior, waterfronts, and oceanographic discontinuities), are discussed here to explain their peculiar characteristics. Overall, the genetic data presented, both at the local and regional level, could represent a baseline information, useful for the temporal monitoring of populations, and to assess the effects of present or future fishing/management/conservation measures.
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- 2023
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9. New insights on the systematics of echinoids belonging to the family Spatangidae Gray, 1825 using a combined approach based on morphology, morphometry, and genetics
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Paolo Stara, Riccardo Melis, Andrea Bellodi, Maria Cristina Follesa, Carlo Corradini, Laura Carugati, Antonello Mulas, Michela Sibiriu, and Rita Cannas
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echinoids ,Propespatagus ,new genus ,Mediterranean ,DNA analyses ,morphology ,Science ,General. Including nature conservation, geographical distribution ,QH1-199.5 - Abstract
Spatangoids are probably the least resolved group within echinoids, with known topological incongruencies between phylogenies derived from molecular (very scarce) and morphological data. The present work, based on the analysis of 270 specimens of Spatangidae (Echinoidea, Spatangoida) trawled in the Sardinian seas (Western Mediterranean), allowed us to verify the constancy of some characters that we consider to be diagnostic at the genus level —such as the path of the subanal fasciole and the relationship between labrum and adjacent ambulacral plates —and to distinguish two distinct forms within the studied material. Based on morphological characters, morphometrics, and molecular analyses (sequencing of two mitochondrial markers: cytochrome c oxidase subunit1 (COI) and 16S), most of the individuals were classified as morphotype A and attributed to the species Spatangus purpureus, the most common spatangoid in the Mediterranean Sea, while a few corresponded to a different morphotype (B), genetically close to the species Spatangus raschi. Preliminary morphological analyses seemed to indicate that morphotype B specimens from Sardinia are slightly different from S. raschi and from Spatangus subinermis individuals, the second species of the family known to occur in the Mediterranean Sea. On the basis of morpho-structural observations and molecular analyses, comparing Mediterranean living forms with species from other areas (Central Eastern Atlantic, North Sea and neighboring basins, South African Sea, Philippines and Indonesian Archipelago, New Zealand, and Hawaiian Islands), the clear distinction of S. purpureus from several other species classified as Spatangus was confirmed. Based on the morphological and genetic differences, we propose to maintain the genus Spatangus including in it only the type species S. purpureus among the living species and to establish the new genus Propespatagus nov. gen. to include several other species previously classified as Spatangus. The clear distinction among different genera was also detected in fossil forms of Spatangus, Propespatagus nov. gen., and Sardospatangus (†) from the European Oligo-Miocene sedimentary rocks of Germany; the Miocene of Ukraine, Italy, and North Africa; the Plio-Pleistocene of Italy; and the Mio-Pliocene of Florida (USA). The new data can help in addressing taxonomic ambiguities within echinoids, as well as in improving species identification, and hence biodiversity assessments in the Mediterranean region.
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- 2023
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10. First evidence of contagious yawning in a wild lemur
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Valente, Daria, Torti, Valeria, De Gregorio, Chiara, Gamba, Marco, Carugati, Filippo, Miaretsoa, Longondraza, Pavoni, Francesca, Raimondi, Teresa, Ratsimbazafy, Jonah, Giacoma, Cristina, and Norscia, Ivan
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- 2023
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11. Effect of surface tension and drying time on inkjet-printed PEDOT:PSS for ITO-free OLED devices
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Cinquino, Marco, Prontera, Carmela Tania, Zizzari, Alessandra, Giuri, Antonella, Pugliese, Marco, Giannuzzi, Roberto, Monteduro, Anna Grazia, Carugati, Matteo, Banfi, Augusto, Carallo, Sonia, Rizzo, Aurora, Andretta, Antonio, Dugnani, Giovanni, Gigli, Giuseppe, and Maiorano, Vincenzo
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- 2022
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12. I Like This New Me: Unravelling Population Structure of Mediterranean Electric Rays and Taxonomic Uncertainties within Torpediniformes
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Riccardo Melis, Simone Di Crescenzo, Alessia Cariani, Alice Ferrari, Valentina Crobe, Andrea Bellodi, Antonello Mulas, Laura Carugati, Elisabetta Coluccia, Maria Cristina Follesa, and Rita Cannas
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cryptic species ,electric rays ,genetic variability ,Mediterranean Sea ,taxonomy uncertainties ,Tetronarce nobiliana ,Veterinary medicine ,SF600-1100 ,Zoology ,QL1-991 - Abstract
The present study focused on the three species of electric rays known to occur in the Mediterranean Sea: Torpedo torpedo, Torpedo marmorata and Tetronarce nobiliana. Correct identification of specimens is needed to properly assess the impact of fisheries on populations and species. Unfortunately, torpedoes share high morphological similarities, boosting episodes of field misidentification. In this context, genetic data was used (1) to identify specimens caught during fishing operations, (2) to measure the diversity among and within these species, and (3) to shed light on the possible occurrence of additional hidden species in the investigated area. New and already published sequences of COI and NADH2 mitochondrial genes were analyzed, both at a small scale along the Sardinian coasts (Western Mediterranean) and at a large scale in the whole Mediterranean Sea. High levels of genetic diversity were found in Sardinian populations, being significantly different from other areas of the Eastern Mediterranean Sea due to the biotic and abiotic factors here discussed. Sardinian torpedoes can hence be indicated as priority populations/areas to be protected within the Mediterranean Sea. Moreover, sequence data confirmed that only the three species occur in the investigated area. The application of several ‘species-delimitation’ methods found evidence of cryptic species in the three species outside the Mediterranean Sea, as well as in other genera/families, suggesting the urgent need for future studies and a comprehensive revision of the order Torpediniformes for its effective conservation.
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- 2023
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13. Scattered accumulation hotspots of macro-litter on the seafloor: Insights for mitigation actions
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Cau, Alessandro, Franceschini, Simone, Moccia, Davide, Gorule, Pankaj A., Agus, Blondine, Bellodi, Andrea, Cannas, Rita, Carugati, Laura, Cuccu, Danila, Dessì, Claudia, Marongiu, Martina F., Melis, Riccardo, Mulas, Antonello, Porceddu, Riccardo, Porcu, Cristina, Russo, Tommaso, and Follesa, Maria Cristina
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- 2022
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14. Global distribution of Leptospira serovar isolations and detections from animal host species: A systematic review and online database
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Hagedoorn, Nienke N., primary, Maze, Michael J., additional, Carugati, Manuela, additional, Cash‐Goldwasser, Shama, additional, Allan, Kathryn J., additional, Chen, Kevin, additional, Cossic, Brieuc, additional, Demeter, Elena, additional, Gallagher, Sarah, additional, German, Richard, additional, Galloway, Renee L., additional, Habuš, Josipa, additional, Rubach, Matthew P., additional, Shiokawa, Kanae, additional, Sulikhan, Nadezhda, additional, and Crump, John A., additional
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- 2024
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15. Limitations of antifungal prophylaxis in preventing invasive Candida surgical site infections after liver transplant surgery
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Carugati, M., primary, Arif, S., additional, Yarrington, M. E., additional, King, L. Y., additional, Harris, M., additional, Evans, K., additional, Barbas, A. S., additional, Sudan, D. L., additional, Perfect, J. R., additional, Miller, R. A., additional, and Alexander, B. D., additional
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- 2024
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16. Guía SIAC 2024 sobre rehabilitación cardiorrespiratoria en pacientes pediátricos con cardiopatías congénitas
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Erazo, Paulo Valderrama, primary, Carugati, Romina, additional, Sardella, Angela, additional, Muñoz, Sandra Flórez, additional, Back, Isabela De Carlos, additional, Fernández, Carlos, additional, Abella, Inés T., additional, Grullón, Angelica, additional, Turquetto, Aida Luiza Ribeiro, additional, Fajardo, Astrid, additional, Corrados, Pedro Chiesa, additional, Cifra, Barbara, additional, Álvarez, Luisa Garcia-Cuenllas, additional, Honicky, Michele, additional, Lima, Luiz Rodrigo Augustemak De, additional, Moreno, Yara María Franco, additional, Cisternas, María Eugenia Salinas, additional, Carvalho, Tales De, additional, Catani, Liane Hulle, additional, Huertas-Quiñones, Manuel, additional, and Yáñez-Gutiérrez, Lucelli, additional
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- 2024
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17. fshr: a fish sex-determining locus shows variable incomplete penetrance across flathead grey mullet populations
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Ferraresso, Serena, Bargelloni, Luca, Babbucci, Massimiliano, Cannas, Rita, Follesa, Maria Cristina, Carugati, Laura, Melis, Riccardo, Cau, Angelo, Koutrakis, Manos, Sapounidis, Argyrios, Crosetti, Donatella, and Patarnello, Tomaso
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- 2021
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18. Facility-based disease surveillance and Bayesian hierarchical modeling to estimate endemic typhoid fever incidence, Kilimanjaro Region, Tanzania, 2007-2018.
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Elena R Cutting, Ryan A Simmons, Deng B Madut, Michael J Maze, Nathaniel H Kalengo, Manuela Carugati, Ronald M Mbwasi, Kajiru G Kilonzo, Furaha Lyamuya, Annette Marandu, Calvin Mosha, Wilbrod Saganda, Bingileki F Lwezaula, Julian T Hertz, Anne B Morrissey, Elizabeth L Turner, Blandina T Mmbaga, Grace D Kinabo, Venance P Maro, John A Crump, and Matthew P Rubach
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Arctic medicine. Tropical medicine ,RC955-962 ,Public aspects of medicine ,RA1-1270 - Abstract
Growing evidence suggests considerable variation in endemic typhoid fever incidence at some locations over time, yet few settings have multi-year incidence estimates to inform typhoid control measures. We sought to describe a decade of typhoid fever incidence in the Kilimanjaro Region of Tanzania. Cases of blood culture confirmed typhoid were identified among febrile patients at two sentinel hospitals during three study periods: 2007-08, 2011-14, and 2016-18. To account for under-ascertainment at sentinel facilities, we derived adjustment multipliers from healthcare utilization surveys done in the hospital catchment area. Incidence estimates and credible intervals (CrI) were derived using a Bayesian hierarchical incidence model that incorporated uncertainty of our observed typhoid fever prevalence, of healthcare seeking adjustment multipliers, and of blood culture diagnostic sensitivity. Among 3,556 total participants, 50 typhoid fever cases were identified. Of typhoid cases, 26 (52%) were male and the median (range) age was 22 (
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- 2022
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19. Parent-offspring turn-taking dynamics influence parents’ song structure and elaboration in a singing primate
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Chiara De Gregorio, Anna Zanoli, Filippo Carugati, Teresa Raimondi, Daria Valente, Valeria Torti, Longondraza Miaretsoa, Andry Rajaonson, Marco Gamba, and Cristina Giacoma
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chorus ,lemur ,primate ,flexibility ,elaboration ,duet ,Evolution ,QH359-425 ,Ecology ,QH540-549.5 - Abstract
Parent-offspring interactions are essential to interpret animal social evolution and behavior, but their role in mediating acoustic communication in animals that interact vocally is still unclear. Increasing evidence shows that primate vocal communication is way more flexible than previously assumed, and research on this topic can provide further information on how the social environment shaped vocal plasticity during the evolution of the Primate order. Indris communicate through elaborated vocal emissions, usually termed songs. Songs are interactive vocal displays in which all members of the family group alternate their emissions, taking turns during chorusing events. We aimed to understand whether specific rules regulate the turn-taking of different group members and investigate the flexibility of indris’ vocal behavior when co-singing with their offspring. We found that social factors can influence the turn-taking organization in a chorus, as offspring were more likely to drop out from the parents’ duet than join in, and we speculate that overlap might signal competition by members of the same-sex. The duet between the reproductive pair was the most common type of singing organization, followed by a duet between mothers and sons and the triadic interaction between mother, father, and son. Interestingly, parents’ solo singing seems to stimulate offspring to vocalize, and we also found that mothers and fathers simplify, at least in part, song elaboration when chorusing with offspring. Our results indicate that indris can perform short-time adjustments to the number of co-emitters and their identity: our approach is advantageous in highlighting the multilevel influences on primate vocal flexibility. Moreover, it provides evidence that some aspects of our vocal plasticity were already present in the lemur lineage.
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- 2022
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20. Real-World Experience With Maribavir for Treatment of Cytomegalovirus Infection in High-Risk Solid Organ Transplant Recipients.
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Ni, Bin, Wolfe, Cameron R, Arif, Sana, Carugati, Manuela, Heldman, Madeleine R, Messina, Julia A, Miller, Rachel A, Saullo, Jennifer L, Baker, Arthur W, and Maziarz, Eileen K
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CYTOMEGALOVIRUS diseases ,TRANSPLANTATION of organs, tissues, etc. ,ANTIVIRAL agents ,TREATMENT failure ,DRUG resistance - Abstract
We evaluated use of maribavir (MBV) for treatment of 15 episodes of refractory/resistant cytomegalovirus infection in 13 solid organ transplant recipients. Treatment failure due to treatment-emergent MBV resistance or early virological recurrence after MBV discontinuation occurred in 7 (47%) episodes. Sustained viral clearance was achieved in 6 (40%) episodes. [ABSTRACT FROM AUTHOR]
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- 2024
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21. Isochronous singing in 3 crested gibbon species (Nomascus spp.).
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Gregorio, Chiara De, Raimondi, Teresa, Bevilacqua, Valeria, Pertosa, Chiara, Valente, Daria, Carugati, Filippo, Bandoli, Francesca, Favaro, Livio, Lefaux, Brice, Ravignani, Andrea, and Gamba, Marco
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MUSICAL ability ,ANIMAL species ,MUSICAL meter & rhythm ,HUMAN evolution ,SINGING - Abstract
The search for common characteristics between the musical abilities of humans and other animal species is still taking its first steps. One of the most promising aspects from a comparative point of view is the analysis of rhythmic components, which are crucial features of human communicative performance but also well-identifiable patterns in the vocal displays of other species. Therefore, the study of rhythm is becoming essential to understand the mechanisms of singing behavior and the evolution of human communication. Recent findings provided evidence that particular rhythmic structures occur in human music and some singing animal species, such as birds and rock hyraxes, but only 2 species of nonhuman primates have been investigated so far (Indri indri and Hylobates lar). Therefore, our study aims to consistently broaden the list of species studied regarding the presence of rhythmic categories. We investigated the temporal organization in the singing of 3 species of crested gibbons (Nomascus gabriellae, Nomascus leucogenys , and Nomascus siki) and found that the most prominent rhythmic category was isochrony. Moreover, we found slight variation in songs' tempo among species, with N. gabriellae and N. siki singing with a temporal pattern involving a gradually increasing tempo (a musical accelerando), and N. leucogenys with a more regular pattern. Here, we show how the prominence of a peak at the isochrony establishes itself as a shared characteristic in the small apes considered so far. [ABSTRACT FROM AUTHOR]
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- 2024
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22. Effect of surface tension and drying time on inkjet-printed PEDOT:PSS for ITO-free OLED devices
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Marco Cinquino, Carmela Tania Prontera, Alessandra Zizzari, Antonella Giuri, Marco Pugliese, Roberto Giannuzzi, Anna Grazia Monteduro, Matteo Carugati, Augusto Banfi, Sonia Carallo, Aurora Rizzo, Antonio Andretta, Giovanni Dugnani, Giuseppe Gigli, and Vincenzo Maiorano
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PEDOT:PSS ,Surface tension ,Co-solvent ,Inkjet printing ,Organic light-emitting diodes ,ITO-Free ,Materials of engineering and construction. Mechanics of materials ,TA401-492 - Abstract
Highly conductive PEDOT:PSS is one of the most promising materials for indium tin oxide (ITO) substitution in printed electronics. Here, we report the development and optimisation of two PEDOT:PSS ink formulations for the fabrication of inkjet-printed transparent conductive layers. Starting from aqueous commercial solutions, co-solvents and a non-ionic surfactant were employed to modify the surface tension, improve the wetting capability of the ink, and obtain uniform and homogeneous thin films. In particular, the quantities of ethanol and surfactant were systematically adjusted to determine the optimal conditions for inkjet printing. The results demonstrate that a surface tension value between 28 and 40 mN/m and approximately 40 vol.% of a low-boiling-point co-solvent are fundamental to ensure the proper wetting of the glass substrate and a quick-drying process that confers uniformity to the printed thin film. The printed PEDOT:PSS thin films show good morphological, optical, and electrical properties that are similar to those observed for the corresponding spin-coated layers. The organic light-emitting diodes (OLEDs) fabricated with the inkjet-printed PEDOT:PSS electrodes showed a maximum quantum efficiency of 5.5% and a maximum current efficiency of 15 cd/A, which is comparable to spin-coated reference devices. Our study demonstrates the great potential of polymeric electrodes for the fabrication of high-efficiency printed OLED devices that are compatible with flexible and stretchable substrates.
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- 2022
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23. What Influences Ideas on Vaccines and Children’s Vaccination?
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Isabel Miguel, Joaquim Valentim, Felice Carugati, and Patrizia Selleri
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vaccination ,mothers ,representational field ,values ,decision-making ,Psychology ,BF1-990 - Abstract
Although the complex reasons underlying parents’ decision whether to vaccinate their children have been largely unraveled, a socio-cognitive perspective on the representational field of vaccination is missing. This study is a contribution to fill such a gap. A sample of 309 Portuguese mothers with children aged 0-6 years answered a self-administered questionnaire. Results show that psychosocial variables such as the number of children modulate mothers’ representations of vaccination as a matter of freedom of choice and preference for natural immunity, while age of children and having (or not) searched for information influence their confidence in vaccines. Also, results show that representations related to freedom of choice, preference for natural immunity, and conspiracy theories are positively predicted by individualism values and a dependent decision-making style, whereas confidence in vaccines is positively associated with universalism values and a rational decision-making style. We discuss the implications of the socio-cognitive dynamics organizing mothers’ representations about vaccines and vaccination for the understanding of behaviors about vaccines and the development of tailored measures for vaccination promotion.
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- 2022
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24. Prevalence and risk factors for human leptospirosis at a hospital serving a pastoralist community, Endulen, Tanzania
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Maze, Michael J., primary, Shirima, Gabriel M., additional, Lukambagire, Abdul-Hamid S., additional, Bodenham, Rebecca F., additional, Rubach, Matthew P., additional, Cash-Goldwasser, Shama, additional, Carugati, Manuela, additional, Thomas, Kate M., additional, Sakasaka, Philoteus, additional, Mkenda, Nestory, additional, Allan, Kathryn J., additional, Kazwala, Rudovick R., additional, Mmbaga, Blandina T., additional, Buza, Joram J., additional, Maro, Venance P., additional, Galloway, Renee L., additional, Haydon, Daniel T., additional, Crump, John A., additional, and Halliday, Jo E. B., additional
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- 2023
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25. 1463. Risk Factors for Primary Invasive Surgical Site Infections among Single Adult Liver Transplants at Duke University Hospital in the Period 2015-2019.
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Carugati, Manuela, primary, Arif, Sana, additional, King, Lindsay Y, additional, Harris, Matt, additional, Evans, Kayla B, additional, Barbas, Andrew, additional, Sudan, Debra, additional, Miller, Rachel, additional, and Alexander, Barbara D, additional
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- 2023
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26. Interleukin-1 receptor antagonist anakinra in association with remdesivir in severe COVID-19: A case report
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Marco Franzetti, Ugo Pozzetti, Manuela Carugati, Alessandro Pandolfo, Chiara Molteni, Paolo Faccioli, Gioacchino Castaldo, Ernesto Longoni, Valentina Ormas, Enrico Iemoli, and Stefania Piconi
- Subjects
Novel coronavirus disease 2019 (COVID-19) ,Cytokine-release syndrome ,Interleukin-1 receptor antagonist ,Anakinra ,Remdesivir ,Infectious and parasitic diseases ,RC109-216 - Abstract
We report the first successful treatment with the IL-1 receptor antagonist anakinra, in association with the most promising and available antiviral therapy, of a severe case of novel coronavirus disease 2019 (COVID-19). We describe the diagnosis, clinical course, and management of the case, including the respiratory failure at presentation, the progression to a scenario characterized by profound inflammatory dysregulation similar to that observed during macrophage activation syndrome, and the clinical improvement after treatment with the IL-1 receptor antagonist anakinra. This case highlights the high tolerability and the interesting immunomodulatory profile of the IL-1 receptor antagonist anakinra in the setting of severe COVID-19 associated with remdesivir therapy. Further studies are needed to confirm the safety and efficacy of this combination strategy in the treatment of this emerging infection.
- Published
- 2020
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27. Fatal respiratory infection due to ST308 VIM-1-producing Pseudomonas aeruginosa in a lung transplant recipient: case report and review of the literature
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M. Carugati, A. Piazza, A. M. Peri, L. Cariani, M. Brilli, D. Girelli, D. Di Carlo, A. Gramegna, M. Pappalettera, F. Comandatore, G. Grasselli, A. P. Cantù, M. Arghittu, A. Gori, C. Bandi, F. Blasi, A. Bandera, and IFALT working group
- Subjects
Cystic fibrosis ,Lung transplant ,Pseudomonas aeruginosa ,Metallo-β-lactamases ,Case report ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Data regarding the prevalence of metallo-β-lactamases (MBLs) among Pseudomonas aeruginosa isolates in cystic fibrosis patients are scarce. Furthermore, there is limited knowledge on the effect of MBL production on patient outcomes. Here we describe a fatal respiratory infection due to P. aeruginosa producing VIM-type MBLs in a lung transplant recipient and the results of the subsequent epidemiological investigation. Case presentation P. aeruginosa isolates collected in the index patient and among patients temporally or spatially linked with the index patient were analyzed in terms of antibiotic susceptibility profile and MBL production. Whole-genome sequencing and phylogenetic reconstruction were also performed for all P. aeruginosa isolates producing VIM-type MBLs. A VIM-producing P. aeruginosa strain was identified in a lung biopsy of a lung transplant recipient with cystic fibrosis. The strain was VIM-1-producer and belonged to the ST308. Despite aggressive treatment, the transplant patient succumbed to the pulmonary infection due to the ST308 strain. A VIM-producing P. aeruginosa strain was also collected from the respiratory samples of a different cystic fibrosis patient attending the same cystic fibrosis center. This isolate harbored the blaVIM-2 gene and belonged to the clone ST175. This patient did not experience an adverse outcome. Conclusions This is the first description of a fatal infection due to P. aeruginosa producing VIM-type MBLs in a lung transplant recipient. The circulation of P. aeruginosa isolates harboring MBLs pose a substantial risk to the cystic fibrosis population due to the limited therapeutic options available and their spreading potential.
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- 2020
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28. There You Are! Automated Detection of Indris’ Songs on Features Extracted from Passive Acoustic Recordings
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Davide Ravaglia, Valeria Ferrario, Chiara De Gregorio, Filippo Carugati, Teresa Raimondi, Walter Cristiano, Valeria Torti, Achaz Von Hardenberg, Jonah Ratsimbazafy, Daria Valente, Cristina Giacoma, and Marco Gamba
- Subjects
bioacoustics ,passive acoustic monitoring ,loud calls ,automated detection ,species recognition ,CNN ,Veterinary medicine ,SF600-1100 ,Zoology ,QL1-991 - Abstract
The growing concern for the ongoing biodiversity loss drives researchers towards practical and large-scale automated systems to monitor wild animal populations. Primates, with most species threatened by extinction, face substantial risks. We focused on the vocal activity of the indri (Indri indri) recorded in Maromizaha Forest (Madagascar) from 2019 to 2021 via passive acoustics, a method increasingly used for monitoring activities in different environments. We first used indris’ songs, loud distinctive vocal sequences, to detect the species’ presence. We processed the raw data (66,443 10-min recordings) and extracted acoustic features based on the third-octave band system. We then analysed the features extracted from three datasets, divided according to sampling year, site, and recorder type, with a convolutional neural network that was able to generalise to recording sites and previously unsampled periods via data augmentation and transfer learning. For the three datasets, our network detected the song presence with high accuracy (>90%) and recall (>80%) values. Once provided the model with the time and day of recording, the high-performance values ensured that the classification process could accurately depict both daily and annual habits of indris‘ singing pattern, critical information to optimise field data collection. Overall, using this easy-to-implement species-specific detection workflow as a preprocessing method allows researchers to reduce the time dedicated to manual classification.
- Published
- 2023
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29. Multi-proxy signatures in deep-water fine-grained sediments: Inherited versus syn-sedimentary factors controlling sediment compositions within a foredeep basin (Paleogene Adriatic foredeep – Northern Italy)
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Di Capua, A, Miano, S, Campagnolo, D, Bonomo, S, Caruso, A, Carugati, G, Cavallo, A, Livio, F, Vezzoli, G, Di Capua, Andrea, Miano, Samuele, Campagnolo, Davide, Bonomo, Sergio, Caruso, Antonio, Carugati, Gabriele, Cavallo, Alessandro, Livio, Franz A., Vezzoli, Giovanni, Di Capua, A, Miano, S, Campagnolo, D, Bonomo, S, Caruso, A, Carugati, G, Cavallo, A, Livio, F, Vezzoli, G, Di Capua, Andrea, Miano, Samuele, Campagnolo, Davide, Bonomo, Sergio, Caruso, Antonio, Carugati, Gabriele, Cavallo, Alessandro, Livio, Franz A., and Vezzoli, Giovanni
- Abstract
This work explores the significance of sedimentary proxies recorded within the Paleogene fine-grained detritus of the Adriatic foredeep (Northern Italy). Such sequences represent the only sedimentary record describing the source-to-sink system delivering detritus from the growing Alpine belt to the basin during the Eocene – Oligocene boundary. The combination of x-ray powder diffractometric, petrographic, SEM-EDS and biostratigraphic analyses on more than twenty samples from the Ternate-Travedona Formation, the Chiasso Formation, and the Villa Olmo Conglomerate allowed to identify the source areas of detritus and potential fluvial paleo-drainages, possibly ascribable to two different sectors of the Southalpine domain. Comparison between these results and the petrographic composition of the Cretaceous wedge in the same area opens to the possibility that Cenozoic drainages were inherited from more limited paleo-drainages developed during the end of the Mesozoic. Results of provenance analysis also gives new insights on how detrital compositions may vary in function of grain-size in tropical-subtropical environments.
- Published
- 2023
30. Where Is More Important Than How in Coastal and Marine Ecosystems Restoration
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Simonetta Fraschetti, Chris McOwen, Loredana Papa, Nadia Papadopoulou, Meri Bilan, Christoffer Boström, Pol Capdevila, Marina Carreiro-Silva, Laura Carugati, Emma Cebrian, Marta Coll, Thanos Dailianis, Roberto Danovaro, Francesco De Leo, Dario Fiorentino, Karine Gagnon, Cristina Gambi, Joaquim Garrabou, Vasilis Gerovasileiou, Bernat Hereu, Silvija Kipson, Jonne Kotta, Jean-Baptiste Ledoux, Cristina Linares, Juliette Martin, Alba Medrano, I. Montero-Serra, Telmo Morato, Antonio Pusceddu, Katerina Sevastou, Christopher J. Smith, Jana Verdura, and Giuseppe Guarnieri
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active restoration ,marine habitats ,restoration effectiveness ,restoration success and failure ,restoration site prioritization ,Science ,General. Including nature conservation, geographical distribution ,QH1-199.5 - Abstract
Restoration is considered an effective strategy to accelerate the recovery of biological communities at local scale. However, the effects of restoration actions in the marine ecosystems are still unpredictable. We performed a global analysis of published literature to identify the factors increasing the probability of restoration success in coastal and marine systems. Our results confirm that the majority of active restoration initiatives are still concentrated in the northern hemisphere and that most of information gathered from restoration efforts derives from a relatively small subset of species. The analysis also indicates that many studies are still experimental in nature, covering small spatial and temporal scales. Despite the limits of assessing restoration effectiveness in absence of a standardized definition of success, the context (degree of human impact, ecosystem type, habitat) of where the restoration activity is undertaken is of greater relevance to a successful outcome than how (method) the restoration is carried out. Contrary to expectations, we found that restoration is not necessarily more successful closer to protected areas (PA) and in areas of moderate human impact. This result can be motivated by the limits in assessing the success of interventions and by the tendency of selecting areas in more obvious need of restoration, where the potential of actively restoring a degraded site is more evident. Restoration sites prioritization considering human uses and conservation status present in the region is of vital importance to obtain the intended outcomes and galvanize further actions.
- Published
- 2021
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31. The Use of Reproductive Indicators for Conservation Purposes: The Case Study of Palinurus elephas in Two Fully Protected Areas and Their Surrounding Zones (Central-Western Mediterranean)
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Cristina Porcu, Laura Carugati, Andrea Bellodi, Pierluigi Carbonara, Alessandro Cau, Danila Cuccu, Faustina Barbara Cannea, Martina Francesca Marongiu, Antonello Mulas, Alessandra Padiglia, Noemi Pascale, Paola Pesci, and Maria Cristina Follesa
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European spiny lobster ,fecundity ,reproductive output ,egg production ,no-take zones ,Biology (General) ,QH301-705.5 - Abstract
In 1990s, the European spiny lobster Palinurus elephas, one of the most commercially important species in the Mediterranean, exhibited a population decline. For this reason, fully protected areas (FPAs) appeared effective in re-establishing natural populations and supporting fishery-management objectives. Here, the reproductive parameters of P. elephas populations in two different FPAs (Su Pallosu and Buggerru, central-western Mediterranean), where a restocking programme was carried out, and in their surrounding commercial zones, were investigated from quantitative and qualitative perspectives. The comparison of fecundity between females collected inside and outside FPAs did not show statistical differences as well as the vitellogenin concentration, which did not vary among eggs of different size classes of females caught inside and outside the FPAs, indicating the same reproductive potential. The study demonstrated a benefit of overexploited populations in terms of enhancement of egg production overtime (15 years for Su Pallosu and 6 years for Buggerru) with a mean egg production 4.25–5.5 times higher at the end of the study than that observed at the beginning of the study. The main driver of eggs production appeared to be size, with larger lobsters more present inside the FPAs than outside. Given these results, the dominant contribution of the two studied FPAs to the regional lobster reproduction is remarkable.
- Published
- 2022
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32. Isochronous singing in 3 crested gibbon species (Nomascusspp.)
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De Gregorio, Chiara, Raimondi, Teresa, Bevilacqua, Valeria, Pertosa, Chiara, Valente, Daria, Carugati, Filippo, Bandoli, Francesca, Favaro, Livio, Lefaux, Brice, Ravignani, Andrea, and Gamba, Marco
- Abstract
The search for common characteristics between the musical abilities of humans and other animal species is still taking its first steps. One of the most promising aspects from a comparative point of view is the analysis of rhythmic components, which are crucial features of human communicative performance but also well-identifiable patterns in the vocal displays of other species. Therefore, the study of rhythm is becoming essential to understand the mechanisms of singing behavior and the evolution of human communication. Recent findings provided evidence that particular rhythmic structures occur in human music and some singing animal species, such as birds and rock hyraxes, but only 2 species of nonhuman primates have been investigated so far (Indri indriand Hylobates lar). Therefore, our study aims to consistently broaden the list of species studied regarding the presence of rhythmic categories. We investigated the temporal organization in the singing of 3 species of crested gibbons (Nomascus gabriellae, Nomascus leucogenys, and Nomascus siki) and found that the most prominent rhythmic category was isochrony. Moreover, we found slight variation in songs’ tempo among species, with N. gabriellaeand N. sikisinging with a temporal pattern involving a gradually increasing tempo (a musical accelerando), and N. leucogenyswith a more regular pattern. Here, we show how the prominence of a peak at the isochrony establishes itself as a shared characteristic in the small apes considered so far.
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- 2024
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33. Molecular and Biological Analysis on Ommastrephes caroli Findings in the Central Western Mediterranean Sea (Sardinian Waters) Including First Age Investigation Using Eye Lenses and Beaks
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Blondine Agus, Laura Carugati, Andrea Bellodi, Rita Cannas, Alessandro Cau, Jacopo Cera, Elisabetta Coluccia, Riccardo Melis, Stefano Ruiu, and Danila Cuccu
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Ommastrephes caroli ,molecular analysis ,reproduction ,age and growth ,Mediterranean Sea ,Science ,General. Including nature conservation, geographical distribution ,QH1-199.5 - Abstract
Molecular identifications based on two mitochondrial markers (cytochrome c oxidase subunit I -COI- and 16S ribosomal RNA gene -16S-) have been implemented to confirm the morphological identification of eight specimens collected in the Central western Mediterranean. Molecular data show they belonged to a recently resurrected species of the genus Ommastrephes, i.e., O. caroli, known to be distributed in the Atlantic Ocean and Mediterranean Sea. Despite this, molecular analyses of COI sequences evidenced the presence of potential genetic differentiation between Mediterranean and Atlantic samples, highlighting the need for further studies, with more individuals to investigate the connectivity between individuals living in the two areas. Furthermore, morphological, biometric and reproductive features here reported, could be useful in evaluating possible distinctive biological features between the Mediterranean and Atlantic individuals. Female mature size was larger than the male. The relationships obtained between the beak measurements and body sizes (DML; TW) were better described by a power model. Asynchronous oocytes development with relatively small oocytes (0.05–1.10 mm) and a protracted intermittent spawning with active feeding were observed. This study also reported for the specie O. caroli the first data on the potential fecundity estimated (840061 oocytes), the oviducal load (90000 ripe oocytes) as well as the number of seminal receptacles and the size and morphology of the spermatangia found in the buccal mass of all mated females. Even if on a low sample size, beaks and eye lenses were used for the first time in O. caroli for age estimation. The statistically significant relationship found between increments counted in eye lenses and beaks highlighted the reliability of the lenses to estimate age in O. caroli, even if further studies will be needed for its validation. Assuming a daily increment for both structures, a mean life span of about 12–13 months was estimated for both sexes, which is consistent with the sexual maturity condition observed in all the samples and the semelparity known for cephalopods coleoids.
- Published
- 2021
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34. Vocal tract shape variation contributes to individual vocal identity in African penguins
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Favaro, Livio, primary, Zanoli, Anna, additional, Ludynia, Katrin, additional, Snyman, Albert, additional, Carugati, Filippo, additional, Friard, Olivier, additional, Scaglione, Frine Eleonora, additional, Manassero, Luca, additional, Valazza, Alberto, additional, Mathevon, Nicolas, additional, Gamba, Marco, additional, and Reby, David, additional
- Published
- 2023
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35. I Like This New Me: Unravelling Population Structure of Mediterranean Electric Rays and Taxonomic Uncertainties within Torpediniformes
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Melis, Riccardo, primary, Di Crescenzo, Simone, additional, Cariani, Alessia, additional, Ferrari, Alice, additional, Crobe, Valentina, additional, Bellodi, Andrea, additional, Mulas, Antonello, additional, Carugati, Laura, additional, Coluccia, Elisabetta, additional, Follesa, Maria Cristina, additional, and Cannas, Rita, additional
- Published
- 2023
- Full Text
- View/download PDF
36. Antibacterial utilization for febrile illnesses and laboratory-confirmed bloodstream infections in northern Tanzania
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Moorthy, Ganga S, primary, Madut, Deng B, additional, Kilonzo, Kajiru G, additional, Lwezaula, Bingileki F, additional, Mbwasi, Ronald, additional, Mmbaga, Blandina T, additional, Ngocho, James S, additional, Saganda, Wilbrod, additional, Bonnewell, John P, additional, Carugati, Manuela, additional, Egger, Joseph R, additional, Hertz, Julian T, additional, Tillekeratne, L Gayani, additional, Maze, Michael J, additional, Maro, Venance P, additional, Crump, John A, additional, and Rubach, Matthew P, additional
- Published
- 2023
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37. The hidden hypothesis: A disseminated tuberculosis case
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Sergio Foresti, Maria Rita Perego, Manuela Carugati, Anna Casati, Cristina Malafronte, Marco Manzoni, Raffaele Badolato, Andrea Gori, and Felice Achilli
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Infectious and parasitic diseases ,RC109-216 - Abstract
Case presentation: 77-year-old former smoker admitted because of fatigue and abdominal distention. Past medical history positive for two previous hospitalizations for pericardial and pleural effusions (no diagnosis achieved). At admission erythrocyte sedimentation rate was 122 mm per hour. Baseline investigations revealed ascitic, pleural and pericardial effusion. Effusions were tapped: neoplastic cells and acid-fast bacilli (AFB) were not identified, aerobic and mycobacterial culture resulted negative. QuantiFERON TB-Gold test was negative. Total body PET-CT and autoimmunity panel were negative. A neoplastic process was considered the most likely explanation. Before signing off the patient to comfort care, a reassessment was performed and an exposure to tuberculosis during childhood was documented. Because of constrictive pericarditis, pericardiectomy was performed: histologic examination showed chronic pericardial inflammation without granulomas, but Ziehl-Neelsen stain identified AFB and PCR was positive for Mycobacterium tuberculosis complex. Patient was started on anti-TB therapy with resolution of the effusions in the following months. Genes associated with defects in innate immunity were sequences and dentritic cells were studied, but no alterations were identified. Discussion: A Bayesian approach to clinical decision making should be recommended. Interpretation of diagnostic tests should take into account the imperfect diagnostic performance of the majority of these tests. Further studies to investigate genetic susceptibility to tuberculosis are needed. Keywords: Tuberculosis, Diagnostic performance, Bayes
- Published
- 2019
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38. Environmental Status and Geomorphological Characterisation of Seven Black Coral Forests on the Sardinian Continental Shelf (NW Mediterranean Sea)
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Davide Moccia, Laura Carugati, Maria Cristina Follesa, Rita Cannas, Pierluigi Carbonara, Antonio Pusceddu, and Alessandro Cau
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marine animal forest ,environmental status ,anthozoans ,ROV ,MSFD ,DPSIR ,Biology (General) ,QH301-705.5 - Abstract
Marine animal forests are key mesophotic ecosystems that are under threat from increasing natural and human pressures. Despite the fact that various international agreements strive to preserve these fragile ecosystems, the environmental status of the majority of these animal-structured environments is unknown. Assessing their environmental status is the first step needed to monitor these essential habitats’ health over time and include them within conservation and protection frameworks, such as the Marine Strategy Framework Directive. Based on Multibeam data and ROV footage, we characterized the geomorphological setting and evaluated the environmental status of seven black coral forests in the centre of the Western Mediterranean Sea, using the Mesophotic Assemblages Conservation Status (MACS) Index. The presence of two antipatharians, Antipathella subpinnata and Leiopathes glaberrima, characterized the seven investigated sites, dwelling on rocky substrate characterized by different environmental drivers (i.e., depth, slope of the substrate, terrain ruggedness, topographic positioning index, and aspect). From the combined evaluation of the associated benthic community status and the anthropogenic impacts affecting it, a “high” and “good” environmental status was assessed for five out of the seven studied black forests, with only two forests classified as having a “moderate” and “poor” status, respectively. Overall, our study showed a site-specific variability of mesophotic black coral forest status, explained by different biological community structures and environmental conditions mainly associated with morphological and anthropogenic factors.
- Published
- 2022
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39. Performance of Xpert Ultra nasopharyngeal swab for identification of tuberculosis deaths in northern Tanzania
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Costales, Cristina, Crump, John A., Mremi, Alex R., Amsi, Patrick T., Kalengo, Nathaniel H., Kilonzo, Kajiru G., Kinabo, Grace, Lwezaula, Bingileki F., Lyamuya, Furaha, Marandu, Annette, Mbwasi, Ronald, Mmbaga, Blandina T., Mosha, Calvin, Carugati, Manuela, Madut, Deng B., Nelson, Ann M., Maze, Michael J., Matkovic, Eduard, Zaki, Sherif R., Maro, Venance P., and Rubach, Matthew P.
- Published
- 2022
- Full Text
- View/download PDF
40. Baseline genetic distinctiveness supports structured populations of thornback ray in the Mediterranean Sea
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Riccardo Melis, Laura Vacca, Alessia Cariani, Laura Carugati, Charis Charilaou, Simone Di Crescenzo, Alice Ferrari, Maria Cristina Follesa, Cecilia Mancusi, Valentina Pinna, Fabrizio Serena, Letizia Sion, Fausto Tinti, and Rita Cannas
- Subjects
Ecology ,Aquatic Science ,Nature and Landscape Conservation - Published
- 2023
41. fshr: a fish sex-determining locus shows variable incomplete penetrance across flathead grey mullet populations
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Serena Ferraresso, Luca Bargelloni, Massimiliano Babbucci, Rita Cannas, Maria Cristina Follesa, Laura Carugati, Riccardo Melis, Angelo Cau, Manos Koutrakis, Argyrios Sapounidis, Donatella Crosetti, and Tomaso Patarnello
- Subjects
Genetics ,Evolutionary Biology ,Genomics ,Science - Abstract
Summary: Whole-genome sequencing data were produced from a single flathead grey mullet female and assembled into a draft genome sequence, whereas publicly available sequence data were used to obtain a male draft sequence. Two pools, each consisting of 60 unrelated individuals, respectively, of male and female fish were analyzed using Pool-Sequencing. Mapping and analysis of Pool-Seq data against the draft genome(s) revealed >30 loci potentially associated with sex, the most promising locus of which, encoding the follicle-stimulating hormone receptor (fshr) and harboring two missense variants, was genotyped on 245 fish from four Mediterranean populations. Genotype data showed that fshr represents a previously unknown sex-determining locus, although the incomplete association pattern between fshr genotype and sex-phenotype, the variability of such pattern across different populations, and the presence of other candidate loci reveal that a greater complexity underlies sex determination in the flathead grey mullet.
- Published
- 2021
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42. Respiratory pathogens in a febrile cohort from Tanzania and associated risks for severe disease outcome
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Y. Zhuang, M.K.Y. Mah, Y. Chen, J.A. Crump, M. Carugati, J.P. Bonnewell, V.P. Maro, G. Smith, M. Linster, and M.P. Rubach
- Subjects
Infectious and parasitic diseases ,RC109-216 - Published
- 2020
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43. Deep-Dwelling Populations of Mediterranean Corallium rubrum and Eunicella cavolini: Distribution, Demography, and Co-Occurrence
- Author
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Laura Carugati, Davide Moccia, Lorenzo Bramanti, Rita Cannas, Maria Cristina Follesa, Susanna Salvadori, and Alessandro Cau
- Subjects
Corallium rubrum ,Eunicella cavolini ,demography ,co-occurrence ,deep sea ,Mediterranean Sea ,Biology (General) ,QH301-705.5 - Abstract
Corallium rubrum and Eunicella cavolini are two octocorals, reported as co-occurring species in the deep rocky habitats of the Mediterranean Sea with a high hydrodynamic and moderate eutrophication. Their spatial distribution and demography in the deep sea are mainly affected by temperature and direct and indirect anthropogenic activities; however, knowledge of the factors that potentially influence their co-existence is scarce. This paper provides novel data on the distribution and demography of these two species, at depths between 50 and 290 m in the Western Mediterranean Sea, providing insights on their co-occurrence. Both species exhibited the highest population density at deeper sites (>150 m), showing an inverse size–density relation. Density values ranged from 0.03 colonies m−2 to 32 and 80 col. m−2 for yellow gorgonian and red coral, respectively. The two species co-occurred in 13% of the total frames examined, mostly dwelling between 120 and 160 m depth. Distance-based linear modeling (DistLM) emphasized that when co-occurring the variability of the two species’ densities were significantly driven by the density—rather than the morphology (i.e., height)—of the other species. We stress the need for further studies to elucidate the possible mutual effects of suspension feeders and to test the role of different environmental factors potentially influencing inter-specific relationships.
- Published
- 2022
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44. Governance Archaeology: Research as Ancestry
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Federica Carugati and Nathan Schneider
- Subjects
History and Philosophy of Science ,Arts and Humanities (miscellaneous) ,Political Science and International Relations ,Social Sciences (miscellaneous) - Abstract
This essay presents the idea of governance archaeology, an approach to learning from the past to inform the politics of the future. By reporting on a prototype historical database, we outline a strategy for co-producing a global commons of collective governance practices that can inspire institutional learning and experimentation, particularly in the face of rapid technological change and vexing global crises. Embedded in our approach is an orientation of ancestry whereby practitioners cultivate relationships of accountability and responsibility to the legacies they learn from, recognizing the harm from past patterns of exploitation. By taking seriously a wide range of historical governance practices, particularly those outside the Western canon, governance archaeology seeks to expand the options available for the design of more moral political economies.
- Published
- 2023
45. Onboard Scientific Observers Provide a Realistic Picture of Harvesting and Management Priorities for the Precious Red Coral (Corallium rubrum L.)
- Author
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Laura Carugati, Alessandro Cau, Maria Cristina Follesa, Riccardo Melis, Davide Moccia, Cristina Porcu, Susanna Salvadori, and Rita Cannas
- Subjects
Corallium rubrum ,logbook ,management plan ,Mediterranean Sea ,onboard observers ,ROV ,Science ,General. Including nature conservation, geographical distribution ,QH1-199.5 - Abstract
Mediterranean red coral Corallium rubrum is considered the most precious coral worldwide. Harvesting activities are performed by licensed scuba divers and managed through the recent pan-Mediterranean management plan issued by General Fisheries Commission for the Mediterranean (GFCM) along with measures locally enacted, imposing limits on licenses, harvesting season, minimum depth of dive, and size. The use of Remotely Operated Vehicles (ROVs) is prohibited, with the only exception being for scientific purposes. Despite measures already in force, the implementation of additional management tools has been recently recommended. This article reports results from the first monitoring campaign on C. rubrum harvesting based on ROVs for seabed exploration and Onboard Scientific Observers (OSOs), carried out from 2012 to 2015 along the coast of Sardinia (Mediterranean Sea—Western basin). More than 450 dives were monitored, confirming how ROV’s support eases the scouting of exploitable banks, leading to increases in catches. OSOs reported the collection of colonies below the minimum reference size and catches/dive above limits. Onboard observers collected data also on colony diameter, which is crucial for the estimation of population size structure and exploitation status. OSOs proved to be valid tools in providing additional and reliable information on red coral harvesting, thus deserving to be included among mandatory measures for the sustainable exploitation of red coral in the Mediterranean Sea.
- Published
- 2020
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46. Curricular articulation between early childhood education and primary school: conceptions and practices
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Ana Paula Cardoso, Florencia Carugati, Carla Lacerda, and Susana Fidalgo
- Subjects
Curricular articulation ,Early childhood education ,Primary school ,Educational continuity ,Special aspects of education ,LC8-6691 ,Public aspects of medicine ,RA1-1270 - Abstract
Introduction: Curricular articulation between early childhood education and primary school is a fundamental process concerning the child’s adaptation to school. Primary teachers should establish links with pre-school educators, facilitating the transition between these two levels of education in a harmonious process, and promoting the continuity of the educational process. Objectives: To ascertain the importance and the meaning that teachers of primary school confer to curricular articulation and to know the aspects of the profile of the pupils that are favoured when consulting the individual process, as well as the most frequent initiatives regarding that articulation. Methods: A descriptive and analytical research was conducted, using a questionnaire survey applied to a sample of 45 teachers of the 1st year of primary school in the municipality of Viseu (Portugal). Results: From the data obtained, it is worth mentioning the great importance that teachers attribute to curricular articulation, the privilege conferred by them on how to behave in society (citizenship), the sense of autonomy and the children’s ability to communicate, as well as the teachers’ commitment to carry out a variety of activities and projects, in addition to the celebrations of thematic days and parties. Conclusions: Curricular articulation facilitates the transition between these two levels of education and contributes to an adequate adaptation of the children to the school, thereby promoting school success for all pupils.
- Published
- 2018
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47. First Integrative Morphological and Genetic Characterization of Tremoctopus violaceussensu stricto in the Mediterranean Sea
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Blondine Agus, Pierluigi Carbonara, Riccardo Melis, Rita Cannas, Laura Carugati, Jacopo Cera, Marilena Donnaloia, Antonello Mulas, Antonio Pais, Stefano Ruiu, Giuseppe Vinci, and Danila Cuccu
- Subjects
Tremoctopus violaceus ,molecular analysis ,biometric features ,age ,mating ,Veterinary medicine ,SF600-1100 ,Zoology ,QL1-991 - Abstract
An integrative approach based on morphological and genetic analyses was undertaken for the first time to confirm the species identification of Mediterranean samples belonging to the genus Tremoctopus. Sequences of two mtDNA genes (cytochrome c oxidase subunit (COI) and 16S) were generated for the first time from Mediterranean samples. Both the similarity-based identifications and tree-based methods indicated that three females can be identified as Tremoctopus violaceus sensu stricto in agreement with their morphological classifications. All Mediterranean sequences clustered with the sequences of Tremoctopus violaceus from the Gulf of Mexico and were clearly differentiated from the sequences attributed to T. gracilis and T. robsoni. The chromatic pattern of the web and some features of gill filaments, arms formula, stylets, radulae, beaks, and stomach contents were given for all the samples; 105,758, 20,140, and 11,237 oocytes were estimated in the mature, immature, and developing samples, respectively. The presence of four spermatangia inside the cavity of the maturing female suggested the ability of this species to mate before reaching full maturity with more partners. Age investigation using beaks, performed for the first time in T. violaceus and within the genus gave results consistent with the different sizes and maturity conditions of the samples.
- Published
- 2021
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- View/download PDF
48. Isochronous singing in 3 crested gibbon species (Nomascus spp.)
- Author
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De Gregorio, Chiara, primary, Raimondi, Teresa, additional, Bevilacqua, Valeria, additional, Pertosa, Chiara, additional, Valente, Daria, additional, Carugati, Filippo, additional, Bandoli, Francesca, additional, Favaro, Livio, additional, Lefaux, Brice, additional, Ravignani, Andrea, additional, and Gamba, Marco, additional
- Published
- 2023
- Full Text
- View/download PDF
49. Influence of vancomycin minimum inhibitory concentration on the outcome of methicillin-susceptible Staphylococcus aureus left-sided infective endocarditis treated with antistaphylococcal β-lactam antibiotics: a prospective cohort study by the International Collaboration on Endocarditis
- Author
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Athan, E., Harris, O., Korman, T.M., Kotsanas, D., Jones, P., Reinbott, P., Ryan, S., Fortes, C.Q., Garcia, P., Jones, S.B., Barsic, B., Bukovski, S., Selton-Suty, C., Aissa, N., Doco-Lecompte, T., Delahaye, F., Vandenesch, F., Tattevin, P., Hoen, B., Plesiat, P., Giamarellou, H., Giannitsioti, E., Tarpatzi, E., Durante-Mangoni, E., Iossa, D., Orlando, S., Ursi, M.P., Pafundi, P.C., D' Amico, F., Bernardo, M., Cuccurullo, S., Dialetto, G., Covino, F.E., Manduca, S., Della Corte, A., De Feo, M., Tripodi, M.F., Baban, T., Kanafani, Z.A., Kanj, S.S., Sfeir, J., Yasmine, M., Morris, A., Murdoch, D.R., Premru, M.M., Lejko-Zupanc, T., Almela, M., Ambrosioni, J., Azqueta, M., Brunet, M., Cervera, C., De Lazzari, E., Falces, C., Fuster, D., Garcia-de-la-Mària, C., Garcia-Gonzalez, J., Gatell, J.M., Marco, F., Miró, J.M., Moreno, A., Ortiz, J., Ninot, S., Paré, J.C., Pericas, J.M., Quintana, E., Ramirez, J., Sandoval, E., Sitges, M., Tolosana, J.M., Vidal, B., Vila, J., Bouza, E., Muñoz, P., Rodríguez-Créixems, M., Ramallo, V., Bradley, S., Wray, D., Steed, L., Cantey, R., Peterson, G., Stancoven, A., Woods, C., Corey, G.R., Reller, L.B., Fowler, V.G., Jr., Chu, V.H., Baloch, K., Dixon, C.C., Harding, T., Jones-Richmond, M., Pappas, P., Park, L.P., Redick, T., Stafford, J., Anstrom, K., Bayer, A.S., Cabell, C.H., Karchmer, A.W., Sexton, D.J., Wang, A., Chu, V., Durack, D.T., Eykyn, S., Moreillon, P., Olaison, L., Raoult, D., Rubinstein, E., Pericàs, J.M., Messina, J.A., Park, L., Sharma-Kuinkel, B.K., and Carugati, M.
- Published
- 2017
- Full Text
- View/download PDF
50. Strongly structured populations and reproductive habitat fragmentation increase the vulnerability of the Mediterranean starry ray <scp> Raja asterias </scp> (Elasmobranchii, Rajidae)
- Author
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Giusy Catalano, Alessia Cariani, Chiara Manfredi, Mancusi Cecilia, Serena Fabrizio, Valentina Crobe, Cannas Rita, Titone Antonino, Sion Letizia, Baino Romano, Melis Riccardo, Carugati Laura, Scarcella Giuseppe, Fausto Tinti, Alice Ferrari, Hemida Farid, Marco Stagioni, Massi Daniela, and Giusy Catalano, Valentina Crobe, Alice Ferrari, Romano Baino, Daniela Massi, Antonino Titone, Cecilia Mancusi, Fabrizio Serena, Rita Cannas, Laura Carugati, Farid Hemida, Chiara Manfredi, Riccardo Melis, Giuseppe Scarcella, Letizia Sion, Marco Stagioni, Fausto Tinti, Alessia Cariani
- Subjects
Mediterranean climate ,Mitochondrial DNA ,Habitat fragmentation ,Ecology ,biology ,Vulnerability ,Zoology ,Aquatic Science ,biology.organism_classification ,Bycatch ,bycatch, connectivity, microsatellite loci, mitochondrial DNA, nursery areas ,Elasmobranchii ,Microsatellite ,Raja asterias ,Nature and Landscape Conservation - Abstract
1. The Mediterranean starry ray (Raja asterias) populations within the Mediterranean Sea are susceptible to high rates of bycatch in the multispecies trawl fisheries. Understanding its population structure and identifying critical habitats are crucial for assessing species vulnerability and setting the groundwork for specific management measures to prevent population decline. 2. To assess the population structure of R. asterias in the Mediterranean, the genetic variation in nine population samples at one mitochondrial marker and eight nuclear microsatellite loci was analysed. Moreover, 172 egg cases collected in the Strait of Sicily were identified at species level using integrated molecular and morphological approaches. 3. Genetic analyses revealed that the Mediterranean starry ray comprises three distinct units inhabiting the western, the central-western, and the central-eastern areas of the Mediterranean. An admixture zone occurs in the Strait of Sicily and the Ionian Sea, where individuals of the central-western and central-eastern population units intermingle. 4. The joint morphometric–genetic analyses of rajid egg cases confirmed the presence of more than one species in the admixture area, with a predominance of egg cases laid by R. asterias. DNA barcoding revealed that egg cases and embryos of R. asterias shared several haplotypes with adult individuals from the centralwestern and central-eastern Mediterranean Sea, revealing that females of both populations laid numerous eggs in this area. 5. According to these findings, detailed taxonomic determination of egg cases, when combined with seasonal migration studies, could improve the capability to identify important spawning or nursery areas for the Mediterranean starry ray, particularly in those admixture zones relevant to maintaining genetic diversity. 6. Finally, these new insights should be considered to update the Action Plan for the Conservation of Cartilaginous Fishes in the Mediterranean Sea with effective measures to reduce the impact of skate bycatch in trawling and safeguard egg cases in nursery areas.
- Published
- 2021
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