Kepngop, Lanvin R. K., Wosula, Everlyne N., Amour, Massoud, Ghomsi, Pierre G. T., Wakam, Louise N., Kansci, Germain, and Legg, James P.
Simple Summary: Bemisia tabaci is as a major pest of vegetable crops in Cameroon, and several species have developed resistance against insecticides. Here, we investigated the frequency of infection by endosymbiont and the genetic diversity of whiteflies in Cameroon. Mitochondrial cytochrome oxidase I (mtCOI) markers and Kompetitive Allele Specific PCR (KASP) were used for the characterization. Overall, an analysis of the mtCOI sequences showed six mitotypes of Bemisia tabaci, and two distinct clades of Bemisia afer and Trialeurodes vaporariorum. Bemisia tabaci mitotypes identified included: Mediterranean (MED) on tomato, pepper, okra, and melon; and sub-Saharan Africa (SSA) groups and sub-groups (SG)–SSA1-SG1, SSA1-SG2, SSA1-SG5, SSA3, and SSA4 on cassava. The six mitotypes of cassava B. tabaci were split into three SNP haplogroups including sub-Saharan Africa–West Africa (SSA-WA), sub-Saharan East and Central Africa (SSA-ECA), and SSA4 by KASP genotyping. The endosymbionts identified infecting the whiteflies were Arsenophonus, Rickettsia, and Wolbachia. Bemisia tabaci (Gennadius) is as a major pest of vegetable crops in Cameroon. These sap-sucking insects are the main vector of many viruses infecting plants, and several cryptic species have developed resistance against insecticides. Nevertheless, there is very little information about whitefly species on vegetable crops and the endosymbionts that infect them in Cameroon. Here, we investigated the genetic diversity of whiteflies and their frequency of infection by endosymbionts in Cameroon. Ninety-two whitefly samples were collected and characterized using mitochondrial cytochrome oxidase I (mtCOI) markers and Kompetitive Allele Specific PCR (KASP). The analysis of mtCOI sequences of whiteflies indicated the presence of six cryptic species (mitotypes) of Bemisia tabaci, and two distinct clades of Bemisia afer and Trialeurodes vaporariorum. Bemisia tabaci mitotypes identified included: MED on tomato, pepper, okra, and melon; and SSA1-SG1, SSA1-SG2, SSA1-SG5, SSA3, and SSA4 on cassava. The MED mitotype predominated in all regions on the solanaceous crops, suggesting that MED is probably the main phytovirus vector in Cameroonian vegetable cropping systems. The more diverse cassava-colonizing B. tabaci were split into three haplogroups (SNP-based grouping) including SSA-WA, SSA4, and SSA-ECA using KASP genotyping. This is the first time that SSA-ECA has been reported in Cameroon. This haplogroup is predominant in regions currently affected by the severe cassava mosaic virus disease (CMD) and cassava brown streak virus disease (CBSD) pandemics. Three endosymbionts including Arsenophonus, Rickettsia, and Wolbachia were present in female whiteflies tested in this study with varying frequency. Arsenophonus, which has been shown to influence the adaptability of whiteflies, was more frequent in the MED mitotype (75%). Cardinium and Hamiltonella were absent in all whitefly samples. These findings add to the knowledge on the diversity of whiteflies and their associated endosymbionts, which, when combined, influence virus epidemics and responses to whitefly control measures, especially insecticides. [ABSTRACT FROM AUTHOR]