13 results on '"Bates, SS"'
Search Results
2. Pseudo-nitzschia pungens (Bacillariophyceae): A cosmopolitan species?
- Author
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Casteleyn, G, Chepurnov, VA, Leliaert, F, Mann, D, Bates, SS, Lundholm, Nina, Rhodes, L, Sabbe, K, Vyverman, W, Casteleyn, G, Chepurnov, VA, Leliaert, F, Mann, D, Bates, SS, Lundholm, Nina, Rhodes, L, Sabbe, K, and Vyverman, W
- Abstract
AbstractGenetic, reproductive and morphological variation were studied in 193 global strains of the marine diatom species Pseudo-nitzschia pungens (Grunow ex Cleve) Hasle to assess potential intraspecific variation and biogeographic distribution patterns. Genetic differentiation between allo- and sympatric strains was investigated using the ITS1-5.8S-ITS2 rDNA region. Three ITS clades were found. Clones of opposite mating type were sexually compatible within clades I or II, and viable F1 hybrid offspring were produced in crosses between them. The molecular differences between these clades were correlated with slight but consistent morphological differences. At present, nothing can be said about morphology and mating behavior for clade III clones because only ITS data were available. The three ITS clades showed different geographic distributions. Clade II was restricted to the NE Pacific, whereas clones belonging to clade III originated from geographically widely separated areas (Vietnam, China and Mexico). ITS clade I was recovered in all locations studied: the North Sea (Belgium, The Netherlands, France), the eastern and western N Atlantic (Spain, Canada), the NW and S Pacific (Japan, New Zealand) and the NE Pacific (Washington State). Clade I thus appears to be globally distributed in temperate coastal areas and provides the first strong evidence to date for the global distribution of a biologically, genetically and morphologically defined diatom species.
- Published
- 2007
3. Mechanisms contributing to low domoic acid uptake by oysters feeding on Pseudo-nitzschia cells. I. Filtration and pseudofeces production
- Author
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Mafra, LL, primary, Bricelj, VM, additional, Ouellette, C, additional, Léger, C, additional, and Bates, SS, additional
- Published
- 2009
- Full Text
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4. Discrimination between domoic-acid-producing and nontoxic forms of the diatom Pseudonitzschia pungens using immunofluorescence
- Author
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Bates, SS, primary, Léger, C, additional, Keafer, BA, additional, and Anderson, DM, additional
- Published
- 1993
- Full Text
- View/download PDF
5. Domoic Acid production by Pseudo-nitzschia seriata (Bacillariophyceae) in Scottish waters
- Author
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Fehling, J, Green, DH, Davidson, K, Bolch, CJS, Bates, SS, Fehling, J, Green, DH, Davidson, K, Bolch, CJS, and Bates, SS
- Abstract
In 1999, a 49,000km2 area in western Scottish waters was closed to shellfish harvesting due to the amnesic shellfish poisoning (ASP) toxin domoicacid (DA). The only previously confirmed DA producer identified had been Pseudo-nitzschia australis Frenguelli. The toxin has appeared every year since and has led to more harvesting closures. We isolated and cultured two strains of Pseudo-nitzschia seriata f. seriata (P. T. Cleve) H. Peragallo from western Scottish waters in 2001 and 2002. They were identified using TEM analysis of their morphological fine structure and sequencing of the internal transcribed spacer (ITS)1, 5.8S, ITS2, and partial large subunit (LSU) rDNA. The morphology of the Scottish P. seriata f. seriata strains differed slightly, for example, in the number of poroid rows, from descriptions in identification keys. Comparison of P. seriata sequences with those of two co-occurring Pseudo-nitzschia australis isolates showed an overall divergence of only 0.012. Sequence divergence between both species was highest in the ITS1 region (0.036). Combined morphological and genetic approache sare needed to identify closely related Pseudo-nitzschia species. The P. seriata strains grew successfully at 15 degrees C, suggesting that although see nas a psychrophilic species, it may also occur at higher water temperatures. All isolates produced DA in stationary phase (measured on day 25): 0.16–0.23 pg DA.per cell in P. seriata and 0.15–1.68 pg DA per cell in P. australis. Our study is the first to identify P. seriata f. seriata as a DA producer in Scottish waters and indicates that at least it and P. australis can be responsible for ASP toxicity in that region.
6. Domoic Acid production by Pseudo-nitzschia seriata (Bacillariophyceae) in Scottish waters
- Author
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Fehling, J, Green, DH, Davidson, K, Bolch, CJS, Bates, SS, Fehling, J, Green, DH, Davidson, K, Bolch, CJS, and Bates, SS
- Abstract
In 1999, a 49,000km2 area in western Scottish waters was closed to shellfish harvesting due to the amnesic shellfish poisoning (ASP) toxin domoicacid (DA). The only previously confirmed DA producer identified had been Pseudo-nitzschia australis Frenguelli. The toxin has appeared every year since and has led to more harvesting closures. We isolated and cultured two strains of Pseudo-nitzschia seriata f. seriata (P. T. Cleve) H. Peragallo from western Scottish waters in 2001 and 2002. They were identified using TEM analysis of their morphological fine structure and sequencing of the internal transcribed spacer (ITS)1, 5.8S, ITS2, and partial large subunit (LSU) rDNA. The morphology of the Scottish P. seriata f. seriata strains differed slightly, for example, in the number of poroid rows, from descriptions in identification keys. Comparison of P. seriata sequences with those of two co-occurring Pseudo-nitzschia australis isolates showed an overall divergence of only 0.012. Sequence divergence between both species was highest in the ITS1 region (0.036). Combined morphological and genetic approache sare needed to identify closely related Pseudo-nitzschia species. The P. seriata strains grew successfully at 15 degrees C, suggesting that although see nas a psychrophilic species, it may also occur at higher water temperatures. All isolates produced DA in stationary phase (measured on day 25): 0.16–0.23 pg DA.per cell in P. seriata and 0.15–1.68 pg DA per cell in P. australis. Our study is the first to identify P. seriata f. seriata as a DA producer in Scottish waters and indicates that at least it and P. australis can be responsible for ASP toxicity in that region.
7. Domoic Acid production by Pseudo-nitzschia seriata (Bacillariophyceae) in Scottish waters
- Author
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Fehling, J, Green, DH, Davidson, K, Bolch, CJS, Bates, SS, Fehling, J, Green, DH, Davidson, K, Bolch, CJS, and Bates, SS
- Abstract
In 1999, a 49,000km2 area in western Scottish waters was closed to shellfish harvesting due to the amnesic shellfish poisoning (ASP) toxin domoicacid (DA). The only previously confirmed DA producer identified had been Pseudo-nitzschia australis Frenguelli. The toxin has appeared every year since and has led to more harvesting closures. We isolated and cultured two strains of Pseudo-nitzschia seriata f. seriata (P. T. Cleve) H. Peragallo from western Scottish waters in 2001 and 2002. They were identified using TEM analysis of their morphological fine structure and sequencing of the internal transcribed spacer (ITS)1, 5.8S, ITS2, and partial large subunit (LSU) rDNA. The morphology of the Scottish P. seriata f. seriata strains differed slightly, for example, in the number of poroid rows, from descriptions in identification keys. Comparison of P. seriata sequences with those of two co-occurring Pseudo-nitzschia australis isolates showed an overall divergence of only 0.012. Sequence divergence between both species was highest in the ITS1 region (0.036). Combined morphological and genetic approache sare needed to identify closely related Pseudo-nitzschia species. The P. seriata strains grew successfully at 15 degrees C, suggesting that although see nas a psychrophilic species, it may also occur at higher water temperatures. All isolates produced DA in stationary phase (measured on day 25): 0.16–0.23 pg DA.per cell in P. seriata and 0.15–1.68 pg DA per cell in P. australis. Our study is the first to identify P. seriata f. seriata as a DA producer in Scottish waters and indicates that at least it and P. australis can be responsible for ASP toxicity in that region.
8. Domoic Acid production by Pseudo-nitzschia seriata (Bacillariophyceae) in Scottish waters
- Author
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Fehling, J, Green, DH, Davidson, K, Bolch, CJS, Bates, SS, Fehling, J, Green, DH, Davidson, K, Bolch, CJS, and Bates, SS
- Abstract
In 1999, a 49,000km2 area in western Scottish waters was closed to shellfish harvesting due to the amnesic shellfish poisoning (ASP) toxin domoicacid (DA). The only previously confirmed DA producer identified had been Pseudo-nitzschia australis Frenguelli. The toxin has appeared every year since and has led to more harvesting closures. We isolated and cultured two strains of Pseudo-nitzschia seriata f. seriata (P. T. Cleve) H. Peragallo from western Scottish waters in 2001 and 2002. They were identified using TEM analysis of their morphological fine structure and sequencing of the internal transcribed spacer (ITS)1, 5.8S, ITS2, and partial large subunit (LSU) rDNA. The morphology of the Scottish P. seriata f. seriata strains differed slightly, for example, in the number of poroid rows, from descriptions in identification keys. Comparison of P. seriata sequences with those of two co-occurring Pseudo-nitzschia australis isolates showed an overall divergence of only 0.012. Sequence divergence between both species was highest in the ITS1 region (0.036). Combined morphological and genetic approache sare needed to identify closely related Pseudo-nitzschia species. The P. seriata strains grew successfully at 15 degrees C, suggesting that although see nas a psychrophilic species, it may also occur at higher water temperatures. All isolates produced DA in stationary phase (measured on day 25): 0.16–0.23 pg DA.per cell in P. seriata and 0.15–1.68 pg DA per cell in P. australis. Our study is the first to identify P. seriata f. seriata as a DA producer in Scottish waters and indicates that at least it and P. australis can be responsible for ASP toxicity in that region.
9. Fluorescence induction of chlorophyll a in the Sargasso Sea and on the Grand Banks: correlation with photosynthetic capacity
- Author
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Bates, SS, primary and Piatt, T, additional
- Published
- 1985
- Full Text
- View/download PDF
10. Fluorescence induction as a measure of photosynthetic capacity in marine phytoplankton: response of Thaiassiosira pseudonana (Baciliariophyceae) and Dunalielta tertiotecta (Chlorophyceae)
- Author
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Bates, SS, primary and Piatt, T, additional
- Published
- 1984
- Full Text
- View/download PDF
11. The inhibitory effect of a non-yessotoxin-producing dinoflagellate, Lingulodinium polyedrum (Stein) Dodge, towards Vibrio vulnificus and Staphylococcus aureus.
- Author
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Quijano-Scheggia S, Barajas-Gonzalez M, Lim HC, Leaw CP, Olivos-Ortiz A, Gaviño-Rodriguez J, Blanco Pérez J, and Bates SS
- Subjects
- Dinoflagellida genetics, Mollusk Venoms, Polymerase Chain Reaction, Dinoflagellida chemistry, Oxocins pharmacology, Staphylococcus aureus drug effects, Vibrio vulnificus drug effects
- Abstract
The increased bacterial resistance to antibiotics has caused global concern, prompting the search for new compounds. Because of their abundance and diversity, marine phytoplankton are an important potential source of such compounds. Research on dinoflagellates has led to the discovery of inhibitors of bacterial growth. The marine dinoflagellate Lingulodinium polyedrum blooms in different regions of the world, including Mexico, and is also known to regulate the growth of other species in coastal waters. Here, we investigated the taxonomy of this dinoflagellate and characterized the ability of its extracts to inhibit the growth of two bacteria of medical importance (Vibrio vulnificus and Staphylococcus aureus). Taxonomic characterization was performed by PCR and gene amplification of ITS, and confirmed that the species isolated off the Pacific coast of Mexico was L. polyedrum. To prove the inhibitory effect of L. polyedrum extracts, cultures were harvested by centrifugation. Pellets from three cellular abundances were extracted with water, methanol, hexane and chloroform. The experiments on V. vulnificus showed a high growth inhibition for the four extracts, ranging from 77 to 98 %. Surprisingly, the growth inhibition was lower when the extracts originated from a higher L. polyedrum cell abundance, ranging from 0 to 34 %. For S. aureus, the growth inhibition was also high, but not statistically different for all extracts and cell abundances, ranging from 62 to 99 %. This study obtained promising results for future pharmacological applications. Our Mexican strain of L. polyedrum did not produce any detectable yessotoxins.
- Published
- 2016
- Full Text
- View/download PDF
12. Gene expression studies for the analysis of domoic acid production in the marine diatom Pseudo-nitzschia multiseries.
- Author
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Boissonneault KR, Henningsen BM, Bates SS, Robertson DL, Milton S, Pelletier J, Hogan DA, and Housman DE
- Subjects
- Diatoms growth & development, Dyneins genetics, Gene Expression Profiling, Gene Expression Regulation, Histones genetics, Humans, Kainic Acid metabolism, Molecular Sequence Data, Oligonucleotide Array Sequence Analysis, Reproducibility of Results, Reverse Transcriptase Polymerase Chain Reaction, Diatoms genetics, Diatoms metabolism, Gene Expression, Kainic Acid analogs & derivatives, Marine Toxins biosynthesis
- Abstract
Background: Pseudo-nitzschia multiseries Hasle (Hasle) (Ps-n) is distinctive among the ecologically important marine diatoms because it produces the neurotoxin domoic acid. Although the biology of Ps-n has been investigated intensely, the characterization of the genes and biochemical pathways leading to domoic acid biosynthesis has been limited. To identify transcripts whose levels correlate with domoic acid production, we analyzed Ps-n under conditions of high and low domoic acid production by cDNA microarray technology and reverse-transcription quantitative PCR (RT-qPCR) methods. Our goals included identifying and validating robust reference genes for Ps-n RNA expression analysis under these conditions., Results: Through microarray analysis of exponential- and stationary-phase cultures with low and high domoic acid production, respectively, we identified candidate reference genes whose transcripts did not vary across conditions. We tested eleven potential reference genes for stability using RT-qPCR and GeNorm analyses. Our results indicated that transcripts encoding JmjC, dynein, and histone H3 proteins were the most suitable for normalization of expression data under conditions of silicon-limitation, in late-exponential through stationary phase. The microarray studies identified a number of genes that were up- and down-regulated under toxin-producing conditions. RT-qPCR analysis, using the validated controls, confirmed the up-regulation of transcripts predicted to encode a cycloisomerase, an SLC6 transporter, phosphoenolpyruvate carboxykinase, glutamate dehydrogenase, a small heat shock protein, and an aldo-keto reductase, as well as the down-regulation of a transcript encoding a fucoxanthin-chlorophyll a-c binding protein, under these conditions., Conclusion: Our results provide a strong basis for further studies of RNA expression levels in Ps-n, which will contribute to our understanding of genes involved in the production and release of domoic acid, an important neurotoxin that affects human health as well as ecosystem function.
- Published
- 2013
- Full Text
- View/download PDF
13. Feeding mechanics as the basis for differential uptake of the neurotoxin domoic acid by oysters, Crassostrea virginica, and mussels, Mytilus edulis.
- Author
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Mafra LL Jr, Bricelj VM, Ouellette C, and Bates SS
- Subjects
- Animals, Biomechanical Phenomena physiology, Eating physiology, Kainic Acid pharmacokinetics, Kainic Acid toxicity, Neurotoxins toxicity, Seawater, Crassostrea physiology, Diatoms metabolism, Kainic Acid analogs & derivatives, Mytilus edulis physiology, Neurotoxins pharmacokinetics
- Abstract
The neurotoxin domoic acid (DA), produced by diatoms Pseudo-nitzschia spp., is transferred to humans via consumption of contaminated bivalves. This study examines feeding mechanisms, namely reduced filtration, pre-ingestive rejection and poor absorption, that might explain the comparatively low DA levels commonly found in oysters during toxic Pseudo-nitzschia blooms. Clearance rate (CR), absorption efficiency (AE) of organic matter and selective rejection in pseudofeces of oysters (Crassostrea virginica) and mussels (Mytilus edulis) were investigated in relation to the DA levels accumulated during 2-wk, simultaneous exposure to toxic Pseudo-nitzschia multiseries. Effects of temperature and P. multiseries cell size were also tested to identify conditions, if any, under which oysters can accumulate unsafe DA levels. Oysters accumulated 3.0-7.5x less DA than mussels from a short-celled P. multiseries clone (length=24microm) at 12 degrees C. This was related to the 7.4-8.5x lower CRs determined for oysters relative to mussels at this temperature. Exposure to a longer-celled P. multiseries clone (81microm) resulted in up to 70x lower toxin levels in oysters compared to mussels, which was attributed to differential feeding selectivity. Mussels were unable to discriminate between long- and short-celled P. multiseries clones from a mixed suspension, whereas oysters were previously shown to preferentially reject long cells (>70microm) in pseudofeces. Both bivalves selectively rejected P. multiseries cells from mixed suspensions containing a flagellate but not another diatom. AE of organics from P. multiseries cells by oysters and mussels was comparably low (42 and 39%, respectively) and thus unlikely to explain their differential DA accumulation. CR and DA uptake by oysters were negligible at
- Published
- 2010
- Full Text
- View/download PDF
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