112 results on '"BEST1"'
Search Results
2. Phenotype and genetic spectrum of six Indian patients with bestrophinopathy
- Author
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Areeba Shakeel, Darshan M Bhatt, Lingam Gopal, Rajiv Raman, Chetan Rao, S. Sripriya, and Muna Bhende
- Subjects
best1 ,bestrophinopathy ,genetic mutations ,phenotype ,Ophthalmology ,RE1-994 - Abstract
The aim of this study is to describe genotype and phenotype of patients with bestrophinopathy. The case records were reviewed retrospectively, findings of multimodal imaging such as color fundus photograph, optical coherence tomography (OCT), fundus autofluorescence, electrophysiological, and genetic tests were noted. Twelve eyes of six patients from distinct Indian families with molecular diagnosis were enrolled. Exon 4 of BEST1 was mutated in 3 cases, while exons 2, 3, and 7 in others. Deletion is seen in Exon 7 and missense mutation in other exons. Sporadic autosomal dominant and recessive inheritance was observed in these families. Two patients had primary angle closure glaucoma with a history of consanguineous marriage and glaucoma in the family. Based on our findings, multifocal vitelliform subretinal deposits were the most common fundus finding in patients with autosomal recessive mutation while macular vitelliform lesion was seen with sporadic or autosomal dominant mutation; however, cosegregation analysis was not done. Baseline OCT showed macular and extramacular subretinal exudates, subretinal fluid, intraretinal cystic and schitic spaces, and thickened photoreceptors outer segment tips. Two patients developed abnormal vasculature and focal choroidal excavation in OCT. A severe reduction in the electro-oculogram Ardens ratio was noted while electroretinography was normal. Bestrophinopathy has a varied presentation with complex genotype-phenotype relationships. OCT is a noninvasive tool for monitoring and prognostication. Genetic testing of other family members should be facilitated.
- Published
- 2024
- Full Text
- View/download PDF
3. Phenotype and genetic spectrum of six Indian patients with bestrophinopathy.
- Author
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Shakeel, Areeba, Bhatt, Darshan M, Gopal, Lingam, Raman, Rajiv, Rao, Chetan, Sripriya, S., and Bhende, Muna
- Abstract
The aim of this study is to describe genotype and phenotype of patients with bestrophinopathy. The case records were reviewed retrospectively, findings of multimodal imaging such as color fundus photograph, optical coherence tomography (OCT), fundus autofluorescence, electrophysiological, and genetic tests were noted. Twelve eyes of six patients from distinct Indian families with molecular diagnosis were enrolled. Exon 4 of BEST1 was mutated in 3 cases, while exons 2, 3, and 7 in others. Deletion is seen in Exon 7 and missense mutation in other exons. Sporadic autosomal dominant and recessive inheritance was observed in these families. Two patients had primary angle closure glaucoma with a history of consanguineous marriage and glaucoma in the family. Based on our findings, multifocal vitelliform subretinal deposits were the most common fundus finding in patients with autosomal recessive mutation while macular vitelliform lesion was seen with sporadic or autosomal dominant mutation; however, cosegregation analysis was not done. Baseline OCT showed macular and extramacular subretinal exudates, subretinal fluid, intraretinal cystic and schitic spaces, and thickened photoreceptors outer segment tips. Two patients developed abnormal vasculature and focal choroidal excavation in OCT. A severe reduction in the electro-oculogram Ardens ratio was noted while electroretinography was normal. Bestrophinopathy has a varied presentation with complex genotype-phenotype relationships. OCT is a noninvasive tool for monitoring and prognostication. Genetic testing of other family members should be facilitated. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
4. Glutamate-releasing BEST1 channel is a new target for neuroprotection against ischemic stroke with wide time window
- Author
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Shuai Xiong, Hui Xiao, Meng Sun, Yunjie Liu, Ling Gao, Ke Xu, Haiying Liang, Nan Jiang, Yuhui Lin, Lei Chang, Haiyin Wu, Dongya Zhu, and Chunxia Luo
- Subjects
BEST1 ,Ischemic stroke ,Glutamate release ,Delayed excitotoxicity ,Infarct expansion ,Neurological functions ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Many efforts have been made to understand excitotoxicity and develop neuroprotectants for the therapy of ischemic stroke. The narrow treatment time window is still to be solved. Given that the ischemic core expanded over days, treatment with an extended time window is anticipated. Bestrophin 1 (BEST1) belongs to a bestrophin family of calcium-activated chloride channels. We revealed an increase in neuronal BEST1 expression and function within the peri-infarct from 8 to 48 h after ischemic stroke in mice. Interfering the protein expression or inhibiting the channel function of BEST1 by genetic manipulation displayed neuroprotective effects and improved motor functional deficits. Using electrophysiological recordings, we demonstrated that extrasynaptic glutamate release through BEST1 channel resulted in delayed excitotoxicity. Finally, we confirmed the therapeutic efficacy of pharmacological inhibition of BEST1 during 6–72 h post-ischemia in rodents. This delayed treatment prevented the expansion of infarct volume and the exacerbation of neurological functions. Our study identifies the glutamate-releasing BEST1 channel as a potential therapeutic target against ischemic stroke with a wide time window.
- Published
- 2023
- Full Text
- View/download PDF
5. Fixation Location and Stability in Best Vitelliform Macular Dystrophy
- Author
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Lorenzo Bianco, MD, Alessandro Arrigo, MD, PhD, Alessandro Marchese, MD, Alessio Antropoli, MD, Emanuela Aragona, MD, PhD, Lamberto La Franca, MD, Luca Mauro, MD, Adelaide Pina, MsC, Rashid Hassan Farah, MsC, Giulia Basile, MsC, Francesco Bandello, MD, FEBO, and Maurizio Battaglia Parodi, MD
- Subjects
Best vitelliform macular dystrophy ,BEST1 ,Fixation eccentricity ,Fixation stability ,Mircoperimetry ,Ophthalmology ,RE1-994 - Abstract
Purpose: To analyze fixation location and stability in best vitelliform macular dystrophy (BVMD) and test their association with best-corrected visual acuity (BCVA). Design: Observational, cross-sectional study. Participants: Thirty patients (55 eyes) affected by genetically confirmed BVMD were followed up at the Retinal Heredodystrophies Unit of IRCCS San Raffaele Scientific Institute, Milan. Methods: Patients underwent testing with macular integrity assessment (MAIA) microperimeter. Fixation location was measured as distance in degrees (°) between preferred retinal locus (PRL) and estimated fovea location (EFL); fixation was defined as eccentric when the distance between PRL and EFL exceeded 2°. Fixation stability was graded as stable, relatively unstable, or unstable and expressed as bivariate contour ellipse area (BCEA, °2). Main Outcome Measures: Fixation location and stability. Results: The median distance of the PRL from the anatomic fovea was 0.7°, and fixation location was eccentric in 27% of eyes. Fixation was graded as stable in 64% of eyes, relatively unstable in 13%, and unstable in 24%, with a median 95% BCEA of 6.2°2. The atrophic/fibrotic stage was associated with worse fixation parameters (all P
- Published
- 2023
- Full Text
- View/download PDF
6. Gene therapy in bestrophinopathies: Insights from preclinical studies in preparation for clinical trials.
- Author
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Amato, Alessia, Wongchaisuwat, Nida, Lamborn, Andrew, Schmidt, Ryan, Everett, Lesley, Yang, Paul, and Pennesi, Mark
- Abstract
The BEST1 gene encodes bestrophin-1, a homopentameric ion channel expressed in the retinal pigment epithelium (RPE), where it localizes to the basolateral plasma membrane. Pathogenic variants in this gene can cause different autosomal dominant and recessive inherited retinal diseases (IRDs), collectively named "bestrophinopathies." These disorders share a number of clinical and molecular features that make them an appealing target for gene therapy. Clinically, bestrophinopathies are often slowly progressive with a wide window of opportunity, and the presence of subretinal material (vitelliform deposits and/or fluid) as a hallmark of these conditions provides an easily quantifiable endpoint in view of future clinical trials. From a molecular standpoint, most BEST1 pathogenic variants have been shown to cause either loss of function (LOF) of the protein or a dominant-negative (DN) effect, with a smaller subset causing a toxic gain of function (GOF). Both LOF and DN mutations may be amenable to gene augmentation alone. On the other hand, individuals harboring GOF variants would require a combination of gene silencing and gene augmentation, which has been shown to be effective in RPE cells derived from patients with Best disease. In this article, we review the current knowledge of BEST1-related IRDs and we discuss how their molecular and clinical features are being used to design novel and promising therapeutic strategies. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
7. Autosomal recessive bestrophinopathy combined with neurofibromatosis type 1 in a patient
- Author
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Bo Zhao, Lian Chen, Peng Zhang, Ke He, Min Lei, and Juan Zhang
- Subjects
Genetic diagnosis ,Neurofibromatosis ,Bestrophinopathy ,BEST1 ,Ophthalmology ,RE1-994 - Abstract
Abstract Background Neurofibromatosis type 1 (NF1) is a multisystem genetic disorder that may affect multiple systems of the body. Autosomal recessive bestrophinopathy (ARB) is a rare retinal dystrophy caused by autosomal recessively mutations in bestrophin 1 (BEST1) gene. So far, we have not retrieved any case report of the same patient with both NF1 and BEST1 gene mutations. Case presentation An 8-year-old female patient with café-au-lait spots, freckling on skin presented to our ophthalmology clinic for routine ophthalmological examination. Her best corrected visual acuity (BCVA) was 20/20 in both eyes. Slit-lamp examination of both eyes revealed few yellowish-brown dome-shaped Lisch nodules over the iris surface. Fundus examination was notable for bilateral confluent yellowish subretinal deposits at macula, few yellow flecks at temporal retina, and cup-to-disc ratio of 0.2. Optical coherence tomography (OCT) revealed subretinal fluid (SRF) involving the fovea, elongated photoreceptor outer segments and mild intraretinal fluid (IRF) at bilateral macula. Fundus autofluorescence demonstrated hyperautofluorescence in the area corresponding to the subretinal deposits. Whole-exome sequencing and Sanger sequencing were used to investigate genetic mutation in the patient and her parents. A BEST1 gene heterozygous missense c.604 C > T (p.Arg202Trp) was identified in the patient and her mother. Also, the patient carries an NF1 nonsense mutation c.6637 C > T (p.Gln2213*) with the mosaic generalized phenotype. There were no visual impairments or obvious neurological, musculoskeletal, behavioral or other symptoms in this patient, so she was managed conservatively and advised to follow up regularly for a long time. Conclusions ARB and NF1, which are caused by two different pathogenic gene mutations, have rarely coexisted in the same patient. The discovery of pathogenic gene mutations may play a crucial role in more accurate diagnostics and genetic consultations for individuals and their families.
- Published
- 2023
- Full Text
- View/download PDF
8. A novel compound heterozygous BEST1 gene mutation in two siblings causing autosomal recessive bestrophinopathy
- Author
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Obaid Imtiyazul Haque, Anbukayalvizhi Chandrasekaran, Faisal Nabi, Owais Ahmad, João Pedro Marques, and Tanweer Ahmad
- Subjects
Autosomal recessive bestrophinopathy ,BEST1 ,Bestrophin-1 ,Inherited retinal dystrophy ,Genetics ,Ophthalmology ,RE1-994 - Abstract
Abstract Purpose To describe the clinical features, imaging characteristics, and genetic test results associated with a novel compound heterozygous mutation of the BEST1 gene in two siblings with autosomal recessive bestrophinopathy. Methods Two siblings underwent a complete ophthalmic examination, including dilated fundus examination, fundus photography, fundus autofluorescence imaging, spectral-domain optical coherence tomography, fluorescein angiography, electroretinography, and electrooculography. A clinical diagnosis of autosomal recessive bestrophinopathy was established based on ocular examination and multimodal retinal imaging. Subsequently, clinical exome sequencing consisting of a panel of 6670 genes was carried out to confirm the diagnosis and assess genetic alterations in the protein-coding region of the genome of the patients. The identified mutations were tested in the two affected siblings and one of their parents. Results Two siblings (a 17-year-old female and a 15-year-old male) presented with reduced visual acuity and bilaterally symmetrical subretinal deposits of hyperautofluorescent materials in the posterior pole, which showed staining in the late phase of fluorescein angiogram. Spectral-domain optical coherence tomography demonstrated hyperreflective subretinal deposits and subretinal fluid accumulation. Both patients shared two mutations in the protein-coding region of the BEST1 gene, c.103G > A, p.(Glu35Lys) and c.313C > A, p.(Arg105Ser) (a novel disease-causing mutation). Sanger sequencing confirmed that the unaffected mother of the proband was carrying p.(Glu35Lys) variant in a heterozygous state. Conclusions We have identified and described the phenotype of a novel disease-causing mutation NM_004183.4:c.313C > A, p.(Arg105Ser) in a heterozygous state along with a previously reported mutation NM_004183.4:c.103G > A, p.(Glu35Lys) of the BEST1 gene in two related patients with autosomal recessive bestrophinopathy.
- Published
- 2022
- Full Text
- View/download PDF
9. Glutamate-releasing BEST1 channel is a new target for neuroprotection against ischemic stroke with wide time window.
- Author
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Xiong, Shuai, Xiao, Hui, Sun, Meng, Liu, Yunjie, Gao, Ling, Xu, Ke, Liang, Haiying, Jiang, Nan, Lin, Yuhui, Chang, Lei, Wu, Haiyin, Zhu, Dongya, and Luo, Chunxia
- Subjects
ISCHEMIC stroke ,CHLORIDE channels ,TREATMENT delay (Medicine) ,PROTEIN expression ,TREATMENT effectiveness ,RECOMBINANT DNA - Abstract
Many efforts have been made to understand excitotoxicity and develop neuroprotectants for the therapy of ischemic stroke. The narrow treatment time window is still to be solved. Given that the ischemic core expanded over days, treatment with an extended time window is anticipated. Bestrophin 1 (BEST1) belongs to a bestrophin family of calcium-activated chloride channels. We revealed an increase in neuronal BEST1 expression and function within the peri-infarct from 8 to 48 h after ischemic stroke in mice. Interfering the protein expression or inhibiting the channel function of BEST1 by genetic manipulation displayed neuroprotective effects and improved motor functional deficits. Using electrophysiological recordings, we demonstrated that extrasynaptic glutamate release through BEST1 channel resulted in delayed excitotoxicity. Finally, we confirmed the therapeutic efficacy of pharmacological inhibition of BEST1 during 6–72 h post-ischemia in rodents. This delayed treatment prevented the expansion of infarct volume and the exacerbation of neurological functions. Our study identifies the glutamate-releasing BEST1 channel as a potential therapeutic target against ischemic stroke with a wide time window. Glutamate release through neuronal BEST1 channel results in a delayed excitotoxicity after ischemia. BEST1 may serve as a potential therapeutic target against ischemic stroke with wide time window. [Display omitted] [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
10. Autosomal recessive bestrophinopathy combined with neurofibromatosis type 1 in a patient.
- Author
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Zhao, Bo, Chen, Lian, Zhang, Peng, He, Ke, Lei, Min, and Zhang, Juan
- Subjects
NEUROFIBROMATOSIS 1 ,NONSENSE mutation ,OPTICAL coherence tomography ,RETINAL degeneration ,GENETIC mutation ,VISUAL acuity - Abstract
Background: Neurofibromatosis type 1 (NF1) is a multisystem genetic disorder that may affect multiple systems of the body. Autosomal recessive bestrophinopathy (ARB) is a rare retinal dystrophy caused by autosomal recessively mutations in bestrophin 1 (BEST1) gene. So far, we have not retrieved any case report of the same patient with both NF1 and BEST1 gene mutations. Case presentation: An 8-year-old female patient with café-au-lait spots, freckling on skin presented to our ophthalmology clinic for routine ophthalmological examination. Her best corrected visual acuity (BCVA) was 20/20 in both eyes. Slit-lamp examination of both eyes revealed few yellowish-brown dome-shaped Lisch nodules over the iris surface. Fundus examination was notable for bilateral confluent yellowish subretinal deposits at macula, few yellow flecks at temporal retina, and cup-to-disc ratio of 0.2. Optical coherence tomography (OCT) revealed subretinal fluid (SRF) involving the fovea, elongated photoreceptor outer segments and mild intraretinal fluid (IRF) at bilateral macula. Fundus autofluorescence demonstrated hyperautofluorescence in the area corresponding to the subretinal deposits. Whole-exome sequencing and Sanger sequencing were used to investigate genetic mutation in the patient and her parents. A BEST1 gene heterozygous missense c.604 C > T (p.Arg202Trp) was identified in the patient and her mother. Also, the patient carries an NF1 nonsense mutation c.6637 C > T (p.Gln2213*) with the mosaic generalized phenotype. There were no visual impairments or obvious neurological, musculoskeletal, behavioral or other symptoms in this patient, so she was managed conservatively and advised to follow up regularly for a long time. Conclusions: ARB and NF1, which are caused by two different pathogenic gene mutations, have rarely coexisted in the same patient. The discovery of pathogenic gene mutations may play a crucial role in more accurate diagnostics and genetic consultations for individuals and their families. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
11. Branch retina vein occlusion combined with angle-closure glaucoma is associated with a mutation in BEST1: a case report
- Author
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Xue Yin and Qinhua Cai
- Subjects
Autosomal recessive bestrophinopathy ,BEST1 ,Angle-closure glaucoma ,Branch retina vein occlusion ,Case report ,Ophthalmology ,RE1-994 - Abstract
Abstract Background It is rare for a patient to be diagnosed with branch retina vein occlusion (BRVO), angle-closure glaucoma (ACG) and autosomal recessive bestrophinopathy (ARB). ARB is strongly associated with ACG. Although glaucoma is a significant risk factor for RVO, there is a plausible relationship between ACG and BRVO. To discuss correlation of these diseases is necessary. Case presentation The genetic testing and medical treatment of a patient with ocular fundus diseases and ACG were recorded. We present a 47-year-old male patient with BRVO who was diagnosed with angle-closure glaucoma and a homozygous mutation of c.140G > A (p.R47H) in BEST1. Intravitreal ranibizumab was administered in combination with three antiglaucomatous eyedrops to lower intraocular pressure (IOP) in the right eye. One month later, BCVA improved to 0.3. IOP was controlled at 13 mmHg. Conclusions ACG was likely combined to ARB, while there’s a plausible relationship between ACG and BRVO.
- Published
- 2022
- Full Text
- View/download PDF
12. RPE-Directed Gene Therapy Improves Mitochondrial Function in Murine Dry AMD Models.
- Author
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Millington-Ward, Sophia, Chadderton, Naomi, Finnegan, Laura K., Post, Iris J. M., Carrigan, Matthew, Nixon, Rachel, Humphries, Marian M., Humphries, Pete, Kenna, Paul F., Palfi, Arpad, and Farrar, G. Jane
- Subjects
- *
GENE therapy , *MACULAR degeneration , *TRANSGENE expression , *OLDER people , *RHODOPSIN , *MITOCHONDRIA - Abstract
Age-related macular degeneration (AMD) is the most common cause of blindness in the aged population. However, to date there is no effective treatment for the dry form of the disease, representing 85–90% of cases. AMD is an immensely complex disease which affects, amongst others, both retinal pigment epithelium (RPE) and photoreceptor cells and leads to the progressive loss of central vision. Mitochondrial dysfunction in both RPE and photoreceptor cells is emerging as a key player in the disease. There are indications that during disease progression, the RPE is first impaired and RPE dysfunction in turn leads to subsequent photoreceptor cell degeneration; however, the exact sequence of events has not as yet been fully determined. We recently showed that AAV delivery of an optimised NADH-ubiquinone oxidoreductase (NDI1) gene, a nuclear-encoded complex 1 equivalent from S. cerevisiae, expressed from a general promoter, provided robust benefit in a variety of murine and cellular models of dry AMD; this was the first study employing a gene therapy to directly boost mitochondrial function, providing functional benefit in vivo. However, use of a restricted RPE-specific promoter to drive expression of the gene therapy enables exploration of the optimal target retinal cell type for dry AMD therapies. Furthermore, such restricted transgene expression could reduce potential off-target effects, possibly improving the safety profile of the therapy. Therefore, in the current study, we interrogate whether expression of the gene therapy from the RPE-specific promoter, Vitelliform macular dystrophy 2 (VMD2), might be sufficient to rescue dry AMD models. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
13. A novel compound heterozygous BEST1 gene mutation in two siblings causing autosomal recessive bestrophinopathy.
- Author
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Haque, Obaid Imtiyazul, Chandrasekaran, Anbukayalvizhi, Nabi, Faisal, Ahmad, Owais, Marques, João Pedro, and Ahmad, Tanweer
- Subjects
GENETIC mutation ,GENETIC variation ,OPTICAL coherence tomography ,SIBLINGS ,GENETIC testing - Abstract
Purpose: To describe the clinical features, imaging characteristics, and genetic test results associated with a novel compound heterozygous mutation of the BEST1 gene in two siblings with autosomal recessive bestrophinopathy. Methods: Two siblings underwent a complete ophthalmic examination, including dilated fundus examination, fundus photography, fundus autofluorescence imaging, spectral-domain optical coherence tomography, fluorescein angiography, electroretinography, and electrooculography. A clinical diagnosis of autosomal recessive bestrophinopathy was established based on ocular examination and multimodal retinal imaging. Subsequently, clinical exome sequencing consisting of a panel of 6670 genes was carried out to confirm the diagnosis and assess genetic alterations in the protein-coding region of the genome of the patients. The identified mutations were tested in the two affected siblings and one of their parents. Results: Two siblings (a 17-year-old female and a 15-year-old male) presented with reduced visual acuity and bilaterally symmetrical subretinal deposits of hyperautofluorescent materials in the posterior pole, which showed staining in the late phase of fluorescein angiogram. Spectral-domain optical coherence tomography demonstrated hyperreflective subretinal deposits and subretinal fluid accumulation. Both patients shared two mutations in the protein-coding region of the BEST1 gene, c.103G > A, p.(Glu35Lys) and c.313C > A, p.(Arg105Ser) (a novel disease-causing mutation). Sanger sequencing confirmed that the unaffected mother of the proband was carrying p.(Glu35Lys) variant in a heterozygous state. Conclusions: We have identified and described the phenotype of a novel disease-causing mutation NM_004183.4:c.313C > A, p.(Arg105Ser) in a heterozygous state along with a previously reported mutation NM_004183.4:c.103G > A, p.(Glu35Lys) of the BEST1 gene in two related patients with autosomal recessive bestrophinopathy. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
14. Microstructural changes of photoreceptor layers detected by ultrahigh-resolution SD-OCT in patients with autosomal recessive bestrophinopathy
- Author
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Kazushige Tsunoda and Gen Hanazono
- Subjects
Autosomal recessive bestrophinopathy ,BEST1 ,Interdigitation zone ,Ellipsoid zone ,Photoreceptor ,Spectral-domain OCT ,Ophthalmology ,RE1-994 - Abstract
Purpose: To determine the changes in the microstructures of the photoreceptors in patients with autosomal recessive bestrophinopathy (ARB) by ultrahigh-resolution spectral-domain optical coherence tomography (UHR-SD-OCT). Methods: Five eyes of 4 patients with ARB were studied. Cross-sectional images of the fovea were recorded by the UHR-SD-OCT system with a depth resolution of
- Published
- 2022
- Full Text
- View/download PDF
15. Impaired Bestrophin Channel Activity in an iPSC-RPE Model of Best Vitelliform Macular Dystrophy (BVMD) from an Early Onset Patient Carrying the P77S Dominant Mutation.
- Author
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Navinés-Ferrer, Arnau, Ruiz-Nogales, Sheila, Navarro, Rafael, and Pomares, Esther
- Subjects
- *
MACULAR degeneration , *GAIN-of-function mutations , *GENE expression , *PROGNOSIS , *PHAGOCYTIC function tests , *ION channels - Abstract
Best Vitelliform Macular dystrophy (BVMD) is the most prevalent of the distinctive retinal dystrophies caused by mutations in the BEST1 gene. This gene, which encodes for a homopentameric calcium-activated ion channel, is crucial for the homeostasis and function of the retinal pigment epithelia (RPE), the cell type responsible for recycling the visual pigments generated by photoreceptor cells. In BVMD patients, mutations in this gene induce functional problems in the RPE cell layer with an accumulation of lipofucsin that evolves into cell death and loss of sight. In this work, we employ iPSC-RPE cells derived from a patient with the p.Pro77Ser dominant mutation to determine the correlation between this variant and the ocular phenotype. To this purpose, gene and protein expression and localization are evaluated in iPSC-RPE cells along with functional assays like phagocytosis and anion channel activity. Our cell model shows no differences in gene expression, protein expression/localization, or phagocytosis capacity, but presents an increased chloride entrance, indicating that the p.Pro77Ser variant might be a gain-of-function mutation. We hypothesize that this variant disturbs the neck region of the BEST1 channel, affecting channel function but maintaining cell homeostasis in the short term. This data shed new light on the different phenotypes of dominant mutations in BEST1, and emphasize the importance of understanding its molecular mechanisms. Furthermore, the data widen the knowledge of this pathology and open the door for a better diagnosis and prognosis of the disease. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
16. Branch retina vein occlusion combined with angle-closure glaucoma is associated with a mutation in BEST1: a case report.
- Author
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Yin, Xue and Cai, Qinhua
- Abstract
Background: It is rare for a patient to be diagnosed with branch retina vein occlusion (BRVO), angle-closure glaucoma (ACG) and autosomal recessive bestrophinopathy (ARB). ARB is strongly associated with ACG. Although glaucoma is a significant risk factor for RVO, there is a plausible relationship between ACG and BRVO. To discuss correlation of these diseases is necessary.Case Presentation: The genetic testing and medical treatment of a patient with ocular fundus diseases and ACG were recorded. We present a 47-year-old male patient with BRVO who was diagnosed with angle-closure glaucoma and a homozygous mutation of c.140G > A (p.R47H) in BEST1. Intravitreal ranibizumab was administered in combination with three antiglaucomatous eyedrops to lower intraocular pressure (IOP) in the right eye. One month later, BCVA improved to 0.3. IOP was controlled at 13 mmHg.Conclusions: ACG was likely combined to ARB, while there's a plausible relationship between ACG and BRVO. [ABSTRACT FROM AUTHOR]- Published
- 2022
- Full Text
- View/download PDF
17. Familial autosomal recessive bestrophinopathy: identification of a novel variant in BEST1 gene and the specific metabolomic profile
- Author
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Panpan Ye, Jia Xu, Yueqiu Luo, Zhitao Su, and Ke Yao
- Subjects
Autosomal recessive bestrophinopathy ,BEST1 ,Mutation ,Metabolomics ,Internal medicine ,RC31-1245 ,Genetics ,QH426-470 - Abstract
Abstract Background Autosomal recessive bestrophinopathy (ARB) is a retinal degenerative disorder caused by BEST1 mutations with autosomal recessive inheritance. We aim to map a comprehensive genomic and metabolomic profile of a consanguineous Chinese family with ARB. Methods Ophthalmic examinations were performed on the affected patients with ARB. The proband was screened for potential causative mutations in a panel with 256 known retinal disease genes by using target capture sequencing. The related mutation was further validated and segregated in the family members by Sanger sequencing. In silico prediction tools were used for pathogenicity assessment. A UHPLC-MS/MS metabolomic analysis was performed to explore the disease-associated metabolic feature. Results The affected patients from this family were characterized by low vision, the presence of subretinal fluid, macular edema, and hyperopia with coincidental angle closure. DNA sequencing identified a novel missense mutation in the BEST1 gene c.646G > A (p.Val216Ile) of the proband. Sanger sequencing further confirmed the mutation. The missense mutation was co-segregation across the pedigree and predicted to be deleterious by SIFT (0.017). The blood metabolic profiles were highly similar among all family members probably because of the same lifestyle, habitat and genomic background. However, ARB patients presented a significant deregulation of metabolites, such as citric acid, L-Threonic acid, and eicosapentaenoic acid. Conclusions We identified a novel disease-associated variant in the BEST1 gene as well as a disease-specific metabolic feature in familial ARB. Our findings helped improve the understanding of ARB mechanisms.
- Published
- 2020
- Full Text
- View/download PDF
18. Editorial: Molecular Mechanisms of Retinal Cell Degeneration and Regeneration
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Glenn P. Lobo, Manas R. Biswal, and Altaf A. Kondkar
- Subjects
retinal cell degeneration ,RPE ,cilia ,AMD ,BEST1 ,Biology (General) ,QH301-705.5 - Published
- 2021
- Full Text
- View/download PDF
19. Generation of Astrocyte-specific BEST1 Conditional Knockout Mouse with Reduced Tonic GABA Inhibition in the Brain.
- Author
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Joo J, Kim KJ, Lim J, Choi SY, Koh W, and Lee CJ
- Abstract
Bestrophin-1 (BEST1) is a Ca
2+ -activated anion channel known for its role in astrocytes. Best1 is permeable to gliotransmitters, including GABA, to contribute to tonic GABA inhibition and modulate synaptic transmission in neighboring neurons. Despite the crucial functions of astrocytic BEST1, there is an absence of genetically engineered cell-type specific conditional mouse models addressing these roles. In this study, we developed an astrocyte-specific BEST1 conditional knock-out (BEST1 aKO) mouse line. Using the embryonic stem cell (ES cell) targeting method, we developed Best1 floxed mice (C57BL/6JCya- Best1em1flox /Cya), which have exon 3, 4, 5, and 6 of Best1 flanked by two loxP sites. By crossing with hGFAP-CreERT2 mice, we generated Best1 floxed/hGFAP-CreERT2 mice, which allowed for the tamoxifen-inducible deletion of Best1 under the human GFAP promoter. We characterized its features across various brain regions, including the striatum, hippocampal dentate gyrus (HpDG), and Parafascicular thalamic nucleus (Pf). Compared to the Cre-negative control, we observed significantly reduced BEST1 protein expression in immunohistochemistry (IHC) and tonic GABA inhibition in patch clamp recordings. The reduction in tonic GABA inhibition was 66.7% in the striatum, 46.4% in the HpDG, and 49.6% in the Pf. Our findings demonstrate that the BEST1 channel in astrocytes significantly contributes to tonic inhibition in the local brain areas. These mice will be valuable for future studies not only on tonic GABA release but also on tonic release of gliotransmitters mediated by astrocytic BEST1.- Published
- 2024
- Full Text
- View/download PDF
20. Bestrophinopathies: perspectives on clinical disease, Bestrophin-1 function and developing therapies.
- Author
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Singh Grewal, Simranjeet, Smith, Joseph J., and Carr, Amanda-Jayne F.
- Subjects
RETINITIS pigmentosa ,GENE therapy ,STEM cells ,RETINAL diseases ,CRISPRS - Abstract
Bestrophinopathies are a group of clinically distinct inherited retinal dystrophies that typically affect the macular region, an area synonymous with central high acuity vision. This spectrum of disorders is caused by mutations in bestrophin1 (BEST1), a protein thought to act as a Ca
2+ -activated Cl- channel in the retinal pigment epithelium (RPE) of the eye. Although bestrophinopathies are rare, over 250 individual pathological mutations have been identified in the BEST1 gene, with many reported to have various clinical expressivity and incomplete penetrance. With no current clinical treatments available for patients with bestrophinopathies, understanding the role of BEST1 in cells and the pathological pathways underlying disease has become a priority. Induced pluripotent stem cell (iPSC) technology is helping to uncover disease mechanisms and develop treatments for RPE diseases, like bestrophinopathies. Here, we provide a comprehensive review of the pathophysiology of bestrophinopathies and highlight how patient-derived iPSC-RPE are being used to test new genomic therapies in vitro. [ABSTRACT FROM AUTHOR]- Published
- 2021
- Full Text
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21. The molecular mechanism of synaptic activity‐induced astrocytic volume transient.
- Author
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Woo, Junsung, Jang, Minwoo Wendy, Lee, Jaekwang, Koh, Wuhyun, Mikoshiba, Katsuhiko, and Lee, C. Justin
- Subjects
- *
LONG-term synaptic depression , *INTRINSIC optical imaging , *MOLECULAR probes - Abstract
Key points: Neuronal activity causes astrocytic volume change via K+ uptake through TREK‐1 containing two‐pore domain potassium channels.The volume transient is terminated by Cl− efflux through the Ca2+‐activated anion channel BEST1.The source of the Ca2+ required to open BEST1 appears to be the stretch‐activated TRPA1 channel.Intense neuronal activity is synaptically coupled with a physical change in astrocytes via volume transients. The brain volume changes dynamically and transiently upon intense neuronal activity through a tight regulation of ion concentrations and water movement across the plasma membrane of astrocytes. We have recently demonstrated that an intense neuronal activity and subsequent astrocytic AQP4‐dependent volume transient are critical for synaptic plasticity and memory. We have also pharmacologically demonstrated a functional coupling between synaptic activity and the astrocytic volume transient. However, the precise molecular mechanisms of how intense neuronal activity and the astrocytic volume transient are coupled remain unclear. Here we utilized an intrinsic optical signal imaging technique combined with fluorescence imaging using ion sensitive dyes and molecular probes and electrophysiology to investigate the detailed molecular mechanisms in genetically modified mice. We report that a brief synaptic activity induced by a train stimulation (20 Hz, 1 s) causes a prolonged astrocytic volume transient (80 s) via K+ uptake through TREK‐1 containing two‐pore domain potassium (K2P) channels, but not Kir4.1 or NKCC1. This volume change is terminated by Cl− efflux through the Ca2+‐activated anion channel BEST1, but not the volume‐regulated anion channel TTYH. The source of the Ca2+ required to open BEST1 appears to be the stretch‐activated TRPA1 channel in astrocytes, but not IP3R2. In summary, our study identifies several important astrocytic ion channels (AQP4, TREK‐1, BEST1, TRPA1) as the key molecules leading to the neuronal activity‐dependent volume transient in astrocytes. Our findings reveal new molecular and cellular mechanisms for the synaptic coupling of intense neuronal activity with a physical change in astrocytes via volume transients. Key points: Neuronal activity causes astrocytic volume change via K+ uptake through TREK‐1 containing two‐pore domain potassium channels.The volume transient is terminated by Cl− efflux through the Ca2+‐activated anion channel BEST1.The source of the Ca2+ required to open BEST1 appears to be the stretch‐activated TRPA1 channel.Intense neuronal activity is synaptically coupled with a physical change in astrocytes via volume transients. [ABSTRACT FROM AUTHOR]
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- 2020
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22. The Y227N mutation affects bestrophin-1 protein stability and impairs sperm function in a mouse model of Best vitelliform macular dystrophy
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Andrea Milenkovic, Denise Schmied, Naoyuki Tanimoto, Mathias W. Seeliger, Janet R. Sparrow, and Bernhard H. F. Weber
- Subjects
Bestrophin-1 ,BEST1 ,Vitelliform macular dystrophy ,Protein stability ,Sperm motility ,Best1Y227N knock-in mouse ,Science ,Biology (General) ,QH301-705.5 - Abstract
Human bestrophin-1 (BEST1) is an integral membrane protein known to function as a Ca2+-activated and volume-regulated chloride channel. The majority of disease-associated mutations in BEST1 constitute missense mutations and were shown in vitro to lead to a reduction in mutant protein half-life causing Best disease (BD), a rare autosomal dominant macular dystrophy. To further delineate BEST1-associated pathology in vivo and to provide an animal model useful to explore experimental treatment efficacies, we have generated a knock-in mouse line (Best1Y227N). Heterozygous and homozygous mutants revealed no significant ocular abnormalities up to 2 years of age. In contrast, knock-in animals demonstrated a severe phenotype in the male reproductive tract. In heterozygous Best1Y227N males, Best1 protein was significantly reduced in testis and almost absent in homozygous mutant mice, although mRNA transcription of wild-type and knock-in allele is present and similar in quantity. Degradation of mutant Best1 protein in testis was associated with adverse effects on sperm motility and the capability to fertilize eggs. Based on these results, we conclude that mice carrying the Best1 Y227N mutation reveal a reproducible pathologic phenotype and thus provide a valuable in vivo tool to evaluate efficacy of drug therapies aimed at restoring Best1 protein stability and function.
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- 2019
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23. Familial autosomal recessive bestrophinopathy: identification of a novel variant in BEST1 gene and the specific metabolomic profile.
- Author
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Ye, Panpan, Xu, Jia, Luo, Yueqiu, Su, Zhitao, and Yao, Ke
- Subjects
RECESSIVE genes ,MISSENSE mutation ,LOW vision ,EICOSAPENTAENOIC acid ,METABOLIC profile tests ,CITRIC acid - Abstract
Background: Autosomal recessive bestrophinopathy (ARB) is a retinal degenerative disorder caused by BEST1 mutations with autosomal recessive inheritance. We aim to map a comprehensive genomic and metabolomic profile of a consanguineous Chinese family with ARB. Methods: Ophthalmic examinations were performed on the affected patients with ARB. The proband was screened for potential causative mutations in a panel with 256 known retinal disease genes by using target capture sequencing. The related mutation was further validated and segregated in the family members by Sanger sequencing. In silico prediction tools were used for pathogenicity assessment. A UHPLC-MS/MS metabolomic analysis was performed to explore the disease-associated metabolic feature. Results: The affected patients from this family were characterized by low vision, the presence of subretinal fluid, macular edema, and hyperopia with coincidental angle closure. DNA sequencing identified a novel missense mutation in the BEST1 gene c.646G > A (p.Val216Ile) of the proband. Sanger sequencing further confirmed the mutation. The missense mutation was co-segregation across the pedigree and predicted to be deleterious by SIFT (0.017). The blood metabolic profiles were highly similar among all family members probably because of the same lifestyle, habitat and genomic background. However, ARB patients presented a significant deregulation of metabolites, such as citric acid, L-Threonic acid, and eicosapentaenoic acid. Conclusions: We identified a novel disease-associated variant in the BEST1 gene as well as a disease-specific metabolic feature in familial ARB. Our findings helped improve the understanding of ARB mechanisms. [ABSTRACT FROM AUTHOR]
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- 2020
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- View/download PDF
24. Retinitis pigmentosa associated with a mutation in BEST1
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Lauren A. Dalvin, Jackson E. Abou Chehade, John Chiang, Josefine Fuchs, Raymond Iezzi, and Alan D. Marmorstein
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Retinitis pigmentosa ,BEST1 ,Genetics ,Bestrophinopathy ,Ophthalmology ,RE1-994 - Abstract
Purpose: There is only one prior report associating mutations in BEST1 with a diagnosis of retinitis pigmentosa (RP). The imaging studies presented in that report were more atypical of RP and shared features of autosomal recessive bestrophinopathy and autosomal dominant vitreoretinochoroidopathy. Here, we present a patient with a clinical phenotype consistent with classic features of RP. Observations: The patient in this report was diagnosed with simplex RP based on clinically-evident bone spicules with characteristic ERG and EOG findings. The patient had associated massive cystoid macular edema which resolved following a short course of oral acetazolamide. Genetic testing revealed that the patient carries a novel heterozygous deletion mutation in BEST1 which is not carried by either parent. While this suggests BEST1 is causative, the patient also inherited heterozygous copies of several mutations in other genes known to cause recessive retinal degenerative disease. Conclusions and Importance: How some mutations in BEST1 associate with peripheral retinal degeneration phenotypes, while others manifest as macular degeneration phenotypes is currently unknown. We speculate that RP due to BEST1 mutation requires mutations in other modifier genes.
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- 2016
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25. Patient-specific mutations impair BESTROPHIN1’s essential role in mediating Ca2+-dependent Cl- currents in human RPE
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Yao Li, Yu Zhang, Yu Xu, Alec Kittredge, Nancy Ward, Shoudeng Chen, Stephen H Tsang, and Tingting Yang
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calcium-activated chloride channel (CaCC) ,BESTROPHIN1 ,BEST1 ,retinal pigment epithelium (RPE) ,retinal diseases ,patient-specific iPSC-RPE ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Mutations in the human BEST1 gene lead to retinal degenerative diseases displaying progressive vision loss and even blindness. BESTROPHIN1, encoded by BEST1, is predominantly expressed in retinal pigment epithelium (RPE), but its physiological role has been a mystery for the last two decades. Using a patient-specific iPSC-based disease model and interdisciplinary approaches, we comprehensively analyzed two distinct BEST1 patient mutations, and discovered mechanistic correlations between patient clinical phenotypes, electrophysiology in their RPEs, and the structure and function of BESTROPHIN1 mutant channels. Our results revealed that the disease-causing mechanism of BEST1 mutations is centered on the indispensable role of BESTROPHIN1 in mediating the long speculated Ca2+-dependent Cl- current in RPE, and demonstrate that the pathological potential of BEST1 mutations can be evaluated and predicted with our iPSC-based ‘disease-in-a-dish’ approach. Moreover, we demonstrated that patient RPE is rescuable with viral gene supplementation, providing a proof-of-concept for curing BEST1-associated diseases.
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- 2017
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26. GABA Release from Astrocytes in Health and Disease.
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Kilb, Werner and Kirischuk, Sergei
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- *
ASTROCYTES , *GABA transporters , *GLUTAMATE decarboxylase , *GABA , *CENTRAL nervous system , *NEUROGLIA - Abstract
Astrocytes are the most abundant glial cells in the central nervous system (CNS) mediating a variety of homeostatic functions, such as spatial K+ buffering or neurotransmitter reuptake. In addition, astrocytes are capable of releasing several biologically active substances, including glutamate and GABA. Astrocyte-mediated GABA release has been a matter of debate because the expression level of the main GABA synthesizing enzyme glutamate decarboxylase is quite low in astrocytes, suggesting that low intracellular GABA concentration ([GABA]i) might be insufficient to support a non-vesicular GABA release. However, recent studies demonstrated that, at least in some regions of the CNS, [GABA]i in astrocytes might reach several millimoles both under physiological and especially pathophysiological conditions, thereby enabling GABA release from astrocytes via GABA-permeable anion channels and/or via GABA transporters operating in reverse mode. In this review, we summarize experimental data supporting both forms of GABA release from astrocytes in health and disease, paying special attention to possible feedback mechanisms that might govern the fine-tuning of astrocytic GABA release and, in turn, the tonic GABAA receptor-mediated inhibition in the CNS. [ABSTRACT FROM AUTHOR]
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- 2022
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27. Differential Proximity of Perisynaptic Astrocytic Best1 at the Excitatory and Inhibitory Tripartite Synapses in APP/PS1 and MAOB-KO Mice Revealed by Lattice Structured Illumination Microscopy
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SeungHee Kang, C. Justin Lee, Min-Ho Nam, Heeyoung An, and Wuhyun Koh
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Genetically modified mouse ,Channel distribution ,Chemistry ,Short Communication ,MAOB ,vGAT ,Proximity ,Glutamate receptor ,Inhibitory postsynaptic potential ,Presynapse ,Cellular and Molecular Neuroscience ,Glutamatergic ,Tripartite synapse ,Excitatory postsynaptic potential ,GABAergic ,Neurology (clinical) ,Best1 ,Neuroscience ,vGLUT2 - Abstract
Bestrophin-1 (Best1) is a GABA- and glutamate-permeable, Ca2+-activated Cl- channel, which is mainly expressed in astrocytes and localized at the microdomain or perisynaptic junction of the tripartite synapse. Distribution of Best1 is dramatically changed in pathological conditions such as Alzheimer’s disease. However, it is still unknown whether Best1 is located at the glutamatergic or GABAergic tripartite synapses. Here, we utilized the Lattice structured illumination microscopy (Lattice SIM) to visualize Best1 expression at the perisynaptic junctions of the tripartite synapses in CA1 of mouse hippocampus. We performed co-labeling with antibodies against 1) Best1 and vesicular glutamate transporter-2 (vGLUT2) or 2) Best1 and vesicular GABA transporter (vGAT) to measure the proximity of Best1-containing perisynapse to glutamatergic or GABAergic presynapse, respectively. In addition, we examined two transgenic mouse lines of 1) APP/PS1 mouse showing high astrocytic MAOB activity and cytosolic GABA and 2) MAOB-KO mouse showing low astrocytic GABA. Lattice SIM images were further processed by Imaris, which allowed 3D-rendering and spot identification. We found that astrocytic Best1 was distributed closer to the glutamatergic synapses than GABAergic synapses in the wild-type mice. In APP/PS1 mice, Best1 distribution was significantly changed by moving away from the glutamatergic synapses while moving closer to the GABAergic synapses. On the contrary, in MAOB-KO mice, the Best1 distribution was dramatically changed by moving closer to the glutamatergic synapses and moving far away from the GABAergic synapses. Our findings propose that the proximity of Best1-containing perisynapses to presynapses dynamically changes according to the level of astrocytic cytosolic GABA.
- Published
- 2021
28. Novel BEST1 mutations and clinical characteristics of autosomal recessive bestrophinopathy in a Spanish patient
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Soto-Sierra, Marina [0000-0003-1958-5072], Soto-Sierra, Marina, Morillo-Sánchez, María José, Martín-Sánchez, Marta, Ramos-Jiménez, Manuel, López-Domínguez, Mireia, Ponte-Zuñiga, Beatriz, Antiñolo, Guillermo, Rodríguez-de-la-Rúa-Franch, Enrique, Soto-Sierra, Marina [0000-0003-1958-5072], Soto-Sierra, Marina, Morillo-Sánchez, María José, Martín-Sánchez, Marta, Ramos-Jiménez, Manuel, López-Domínguez, Mireia, Ponte-Zuñiga, Beatriz, Antiñolo, Guillermo, and Rodríguez-de-la-Rúa-Franch, Enrique
- Abstract
[Purpose] To describe the clinical and genetic characteristics (novel mutation in BEST1 gene) of a Spanish patient with autosomal recessive bestrophinopathy (ARB)., [Methods] The detailed ophthalmological examination included best corrected visual acuity (BCVA), color and autofluorescence photography, fluorescein angiography, optical coherence tomography, and electrophysiology tests. A next-generation sequencing (NGS) strategy was applied to the index patient, and then sequenced in an Illumina NextSeq500 system., [Results] A 55-year-old male presented with a BCVA of 20/25 in the right eye and 20/20 in the left eye. Fundoscopy revealed perifoveal yellow flecked-like lesions. Fluorescein angiography and fundus autofluorescence results were consistent with pattern dystrophy. A homozygous frameshift mutation in BEST1 (c.341_342del; p.(Leu114Glnfs*57)) was identified as the cause of the disease., [Conclusion] ARB is a genetic disease that leads to irreversible visual loss. In this report we found a novel mutation responsible for this disease.
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- 2022
29. Structure and Function of the Bestrophin family of calcium-activated chloride channels
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Aaron P. Owji, Yu Zhang, Alec Kittredge, and Tingting Yang
- Subjects
Bestrophins ,Biophysics ,Reviews ,Review ,Gating ,bestrophin structure ,Crystallography, X-Ray ,Biochemistry ,Chloride Channels ,Calcium-Activated Chloride Channels ,Animals ,Humans ,Patch clamp ,Eye Proteins ,biology ,Chemistry ,Bestrophin function ,Electrophysiological Phenomena ,Cell biology ,Structure and function ,Bestrophin 1 ,Structural biology ,Chloride channel ,biology.protein ,Calcium ,Cattle ,Best2 ,Best1 - Abstract
Bestrophins are a family of calcium-activated chloride channels (CaCCs) with relevance to human physiology and a myriad of eye diseases termed “bestrophinopathies”. Since the identification of bestrophins as CaCCs nearly two decades ago, extensive studies from electrophysiological and structural biology perspectives have sought to define their key channel features including calcium sensing, gating, inactivation, and anion selectivity. The initial X-ray crystallography studies on the prokaryotic homolog of Best1, Klebsiella pneumoniae (KpBest), and the Best1 homolog from Gallus gallus (chicken Best1, cBest1), laid the foundational groundwork for establishing the architecture of Best1. Recent progress utilizing single-particle cryogenic electron microscopy has further elucidated the molecular mechanism of gating in cBest1 and, separately, the structure of Best2 from Bos taurus (bovine Best2, bBest2). Meanwhile, whole-cell patch clamp, planar lipid bilayer, and other electrophysiologic analyses using these models as well as the human Best1 (hBest1) have provided ample evidence describing the functional properties of the bestrophin channels. This review seeks to consolidate these structural and functional results to paint a broad picture of the underlying mechanisms comprising the bestrophin family’s structure-function relationship.
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- 2021
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30. Autosomal Recessive Bestrophinopathy
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Nikolas Pontikos, Kamron N. Khan, Genevieve A. Wright, Michalis Georgiou, Monica Armengol, Giuseppe Casalino, Michel Michaelides, Parampal S. Grewal, Andrew R. Webster, and Anthony G. Robson
- Subjects
Male ,Visual acuity ,ADB, autosomal dominant Best disease ,genetic structures ,DA, dark-adapted ,ARB, autosomal recessive bestrophinopathy ,Visual Acuity ,SRF, subretinal fluid ,Compound heterozygosity ,chemistry.chemical_compound ,0302 clinical medicine ,BEST1 ,Medicine ,Bestrophins ,Child ,0303 health sciences ,Clinical Trials as Topic ,logMAR, logarithm of the minimum angle of resolution ,Optical Imaging ,Retinal imaging ,Eye Diseases, Hereditary ,IRF, intraretinal fluid ,Middle Aged ,Autosomal recessive bestrophinopathy ,Natural history ,Electrophysiology ,Phenotype ,Child, Preschool ,Female ,medicine.symptom ,Tomography, Optical Coherence ,Adult ,medicine.medical_specialty ,RPE, retinal pigment epithelium ,Adolescent ,Genes, Recessive ,Article ,LA, light-adapted ,FCE, focal choroidal excavation ,03 medical and health sciences ,Gene therapy ,Retinal Diseases ,Ophthalmology ,Genetics ,VA, visual acuity ,Humans ,Allele ,Molecular Biology ,CNV, choroidal neovascularization ,030304 developmental biology ,Retrospective Studies ,FAF, fundus autofluorescence ,CRT, central retinal thickness ,NIR, near-infrared reflectance ,business.industry ,Genetic heterogeneity ,Retinal ,eye diseases ,Clinical trial ,chemistry ,030221 ophthalmology & optometry ,sense organs ,business ,Cone-Rod Dystrophies - Abstract
Purpose To investigate the clinical course, genetic findings, and phenotypic spectrum of autosomal recessive bestrophinopathy (ARB) in a large cohort of children and adults. Design Retrospective case series. Participants Patients with a detailed clinical phenotype consistent with ARB, biallelic likely disease-causing sequence variants in the BEST1 gene, or both identified at a single tertiary referral center. Methods Review of case notes, retinal imaging (color fundus photography, fundus autofluorescence, OCT), electrophysiologic assessment, and molecular genetic testing. Main Outcome Measures Visual acuity (VA), retinal imaging, and electrophysiologic changes over time. Results Fifty-six eyes of 28 unrelated patients were included. Compound heterozygous variants were detected in most patients (19/27), with 6 alleles recurring in apparently unrelated individuals, the most common of which was c.422G→A, p.(Arg141His; n = 4 patients). Mean presenting VA was 0.52 ± 0.36 logarithm of the minimum angle of resolution (logMAR), and final VA was 0.81 ± 0.75 logMAR (P = 0.06). The mean rate of change in VA was 0.05 ± 0.13 logMAR/year. A significant change in VA was detected in patients with a follow-up of 5 years or more (n = 18) compared with patients with a follow-up of 5 years or less (n = 10; P = 0.001). Presence of subretinal fluid and vitelliform material were early findings in most patients, and this did not change substantially over time. A reduction in central retinal thickness was detected in most eyes (80.4%) over the course of follow-up. Many patients (10/26) showed evidence of generalized rod and cone system dysfunction. These patients were older (P < 0.001) and had worse VA (P = 0.02) than those with normal full-field electroretinography results. Conclusions Although patients with ARB are presumed to have no functioning bestrophin channels, significant phenotypic heterogeneity is evident. The clinical course is characterized by a progressive loss of vision with a slow rate of decline, providing a wide therapeutic window for anticipated future treatment strategies.
- Published
- 2021
31. Familial autosomal recessive bestrophinopathy: identification of a novel variant in BEST1 gene and the specific metabolomic profile
- Author
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Zhitao Su, Ke Yao, Yueqiu Luo, Panpan Ye, and Jia Xu
- Subjects
Male ,0301 basic medicine ,Proband ,lcsh:Internal medicine ,lcsh:QH426-470 ,In silico ,Mutation, Missense ,Biology ,medicine.disease_cause ,Retina ,DNA sequencing ,03 medical and health sciences ,symbols.namesake ,0302 clinical medicine ,Retinal Diseases ,Chloride Channels ,BEST1 ,Retinal Dystrophies ,Electroretinography ,Genetics ,medicine ,Humans ,Missense mutation ,Metabolomics ,Eye Abnormalities ,Bestrophins ,lcsh:RC31-1245 ,Genetics (clinical) ,Sanger sequencing ,Mutation ,Eye Diseases, Hereditary ,Sequence Analysis, DNA ,Human genetics ,Pedigree ,3. Good health ,Autosomal recessive bestrophinopathy ,lcsh:Genetics ,Phenotype ,030104 developmental biology ,030221 ophthalmology & optometry ,symbols ,Female ,Research Article - Abstract
Background Autosomal recessive bestrophinopathy (ARB) is a retinal degenerative disorder caused by BEST1 mutations with autosomal recessive inheritance. We aim to map a comprehensive genomic and metabolomic profile of a consanguineous Chinese family with ARB. Methods Ophthalmic examinations were performed on the affected patients with ARB. The proband was screened for potential causative mutations in a panel with 256 known retinal disease genes by using target capture sequencing. The related mutation was further validated and segregated in the family members by Sanger sequencing. In silico prediction tools were used for pathogenicity assessment. A UHPLC-MS/MS metabolomic analysis was performed to explore the disease-associated metabolic feature. Results The affected patients from this family were characterized by low vision, the presence of subretinal fluid, macular edema, and hyperopia with coincidental angle closure. DNA sequencing identified a novel missense mutation in the BEST1 gene c.646G > A (p.Val216Ile) of the proband. Sanger sequencing further confirmed the mutation. The missense mutation was co-segregation across the pedigree and predicted to be deleterious by SIFT (0.017). The blood metabolic profiles were highly similar among all family members probably because of the same lifestyle, habitat and genomic background. However, ARB patients presented a significant deregulation of metabolites, such as citric acid, L-Threonic acid, and eicosapentaenoic acid. Conclusions We identified a novel disease-associated variant in the BEST1 gene as well as a disease-specific metabolic feature in familial ARB. Our findings helped improve the understanding of ARB mechanisms.
- Published
- 2020
32. Macular dystrophies: clinical and imaging features, molecular genetics and therapeutic options
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Najiha Rahman, Kamron N. Khan, Michalis Georgiou, and Michel Michaelides
- Subjects
0301 basic medicine ,retina ,pattern dystrophy ,TIMP3 ,RS1 ,XLRS ,ABCA4 ,Review ,Disease ,Bioinformatics ,Macular Degeneration ,0302 clinical medicine ,BEST1 ,Medicine ,Medical diagnosis ,macular dystrophy ,biology ,medicine.diagnostic_test ,Macular dystrophy ,gene therapy ,Sensory Systems ,Stargardt disease ,X-linked retinoschisis ,Diagnostic Imaging ,Therapeutics ,Drusen ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,stem cells ,Humans ,Molecular Biology ,Genetic testing ,EFEMP1 ,business.industry ,medicine.disease ,Clinical trial ,Ophthalmology ,030104 developmental biology ,autosomal dominant drusen ,PRPH2 ,Best disease ,030221 ophthalmology & optometry ,biology.protein ,Sorsby fundus dystrophy ,ADD ,business ,pharmacological therapy ,STGD - Abstract
Macular dystrophies (MDs) consist of a heterogeneous group of disorders that are characterised by bilateral symmetrical central visual loss. Advances in genetic testing over the last decade have led to improved knowledge of the underlying molecular basis. The developments in high-resolution multimodal retinal imaging have also transformed our ability to make accurate and more timely diagnoses and more sensitive quantitative assessment of disease progression, and allowed the design of optimised clinical trial endpoints for novel therapeutic interventions. The aim of this review was to provide an update on MDs, including Stargardt disease, Best disease, X-linked r etinoschisis, pattern dystrophy, Sorsby fundus dystrophy and autosomal dominant drusen. It highlights the range of innovations in retinal imaging, genotype–phenotype and structure–function associations, animal models of disease and the multiple treatment strategies that are currently in clinical trial or planned in the near future, which are anticipated to lead to significant changes in the management of patients with MDs.
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- 2019
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33. Diffuse Outer Layer Opacification: A Novel Finding in Patients With Autosomal Recessive Bestrophinopathy
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Jose S. Pulido, Emily Witsberger, and Alan D. Marmorstein
- Subjects
Adult ,retina ,medicine.medical_specialty ,Original Clinical Study ,Adolescent ,genetic structures ,Posterior pole ,Retinal Pigment Epithelium ,Young Adult ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Retinal Diseases ,BEST1 ,Ophthalmology ,medicine ,Humans ,Fluorescein Angiography ,Child ,Retrospective Studies ,Retina ,Retinal pigment epithelium ,medicine.diagnostic_test ,business.industry ,Subretinal Fluid ,autosomal recessive bestrophinopathy ,Fundus photography ,Eye Diseases, Hereditary ,Retinal ,General Medicine ,Retinal Photoreceptor Cell Outer Segment ,Fluorescein angiography ,Photoreceptor outer segment ,eye diseases ,medicine.anatomical_structure ,chemistry ,Child, Preschool ,Disease Progression ,030221 ophthalmology & optometry ,Female ,sense organs ,business ,Tomography, Optical Coherence ,030217 neurology & neurosurgery ,Autosomal recessive bestrophinopathy - Abstract
Purpose Autosomal recessive bestrophinopathy (ARB) is a rare inherited retinal dystrophy resulted from mutations in bestrophin-1 (BEST1) which affect functioning of the retinal pigment epithelium (RPE). Descriptions of disease findings in patients with ARB to date have focused only on macular changes. In this case series, we report previously undescribed mid-peripheral retinal changes occurring in 4 patients with ARB. Design Case series. Methods A single-center, retrospective review of medical records from Mayo Clinic patients with ARB was performed. Imaging reviewed include fundus photography, fundus autofluorescence, spectral domain optical coherence tomography (OCT), and fluorescein angiography. Demographic information and disease progression were noted. Results 4 affected patients from 3 families were identified. All 4 patients were female, and mean age was 12.5 years (range 5-19 years). Diffuse mid-peripheral whitening was consistently noted on fundus photography. Concomitant OCT imaging demonstrated areas of hyperreflectivity in the photoreceptor outer segment layer in areas corresponding to whitening seen on fundus photography. In 1 patient who was followed for 12 years, this finding persisted. Subretinal fluid was also consistently present. Other pathologic imaging findings observed in each patient were in agreement with previous reports of ARB. Conclusions This is the first descriptive report of pathologic findings occurred beyond the posterior pole in patients with ARB. These mid-peripheral retinal changes potentially imply that the entirety of the RPE is affected by mutations in BEST1, as also suggested by previous electro-oculogram (EOG) findings. Such implications will be important when developing treatment trials, as past trials have focused only on the posterior pole of the RPE.
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- 2019
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34. Multimodal imaging and genetic analysis of adult‑onset best vitelliform macular dystrophy in Chinese patients
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Haichun Li, Lin Lu, Tao Li, Bingqian Liu, Chenjin Jin, Qingxiu Wu, Ying Huang, Yu Lian, Ying Lin, Jizhu Li, and Cancan Lyu
- Subjects
Cancer Research ,Intraocular pressure ,medicine.medical_specialty ,Visual acuity ,Genetic counseling ,Population ,medicine.disease_cause ,Genetic analysis ,Exon ,Immunology and Microbiology (miscellaneous) ,BEST1 ,Ophthalmology ,medicine ,education ,multi-modal imaging ,education.field_of_study ,Mutation ,medicine.diagnostic_test ,business.industry ,adult-onset ,Fundus photography ,Articles ,General Medicine ,eye diseases ,best vitelliform macular dystrophy ,mutation ,medicine.symptom ,business - Abstract
Compared to juvenile-onset best vitelliform macular dystrophy (BVMD), adult-onset BVMD is not well characterized and lacks strict diagnostic criteria. The present study aimed to evaluate the clinical and genetic characteristics of four advanced-age Chinese patients with adult-onset BVMD by combining multimodal imaging and genetic analysis. The four patients (all older than 50 years) were diagnosed with adult-onset BVMD at Zhongshan Ophthalmic Center (Guangzhou, China). Comprehensive ophthalmic examinations were performed, including analyses of best-corrected visual acuity, intraocular pressure, slit-lamp examination, fundus photography, optical coherence tomography, fundus fluorescein angiography and electrooculography. Genomic DNA was extracted from leukocytes isolated from peripheral blood obtained from these patients, their family members and 200 unrelated subjects from the same population. A total of 11 exons of the bestrophin-1 (BEST1) gene were amplified using PCR and sequenced. All of the four patients presented with lesions in the macular area. The patients were diagnosed with adult-onset BVMD based on multimodal imaging and genetic analysis. A total of four recurrent mutations, namely c.763C>T (p.Arg255Trp, p.R255W) in exon 7, c.584C>T (p.Ala195Val, p.A195V) in exon 5, c.910_912del GAT (p.304delAsp, p.D304del) in exon 8 and c.310G>C (p.Asp104His, p.D104H) in exon 4 of BEST1, were identified. Sorting intolerant from tolerant predicted that the amino acid substitutions p.R255W, p.A195V and p.D104H in the BEST1 protein were causing the damage. Combining multimodal imaging and genetic analysis was helpful in confirming the diagnosis of patients with adult-onset BVMD. These results maybe valuable for clinical and genetic counseling and for the development of therapeutic interventions for patients with BVMD.
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- 2021
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35. Clinical and molecular findings in patients with pattern dystrophy
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Vittoria Murro, Dario Pasquale Mucciolo, Andrea Sodi, Gianni Virgili, Fabrizio Giansanti, Tommaso Verdina, Ilaria Passerini, Mario Bruschi, Bianca Pacini, and Dario Giorgio
- Subjects
Adult ,Indocyanine Green ,Male ,adult-onset foveomacular vitelliform dystrophy ,medicine.medical_specialty ,Pattern dystrophy ,Peripherins ,Visual Acuity ,Genetic Examination ,Retinal Drusen ,Butterfly-shaped pattern dystrophy ,Drusen ,Fundus (eye) ,BEST1 ,Internal medicine ,Retinal Dystrophies ,medicine ,Humans ,In patient ,Bestrophins ,Fluorescein Angiography ,Coloring Agents ,Genetics (clinical) ,Aged ,Aged, 80 and over ,business.industry ,butterfly-shaped pattern dystrophy ,Middle Aged ,AFVD ,BSPD ,inherited retinal dystrophy ,PRPH2 ,medicine.disease ,Molecular analysis ,Ophthalmology ,Phenotype ,Clinical diagnosis ,Pediatrics, Perinatology and Child Health ,Mutation ,Female ,business ,Tomography, Optical Coherence - Abstract
Purposes: To study the clinical and genetic background of a series of Italian patients affected by pattern dystrophy (PD).Methods: We reviewed patients with a clinical diagnosis of PD examined at the Eye Clinic in Florence from 2012 to 2019. We took into consideration patients with a standard ophthalmological examination, personal and familial ophthalmological history, fundus imaging, and molecular genetic analysis of genes PRPH2 and BEST1. We labelled patients with BEST1 and PRPH2 mutations as m-PD group (mutated) whereas patients with no mutations in these 2 genes as nm-PD group (non-mutated).Results: Seventy-seven PD patients were assessed (average age 59.7 ± 14.2, range 31-88 years). Fifty patients were placed in the nm-PD group and 27 in the m-PD. Pathogenic BEST1 and PRPH2 mutations were detected in 7% and 22% of PD patients, respectively. In total, we reported 1 BEST1 and 8 PRPH2 novel mutations. Ten patients were characterized by drusen in the nm-PD group whereas in no patients in the m-PD group drusen were detected at the fundus.Conclusions: An important proportion of patients affected by PD showed BEST1 or PRPH2 mutations. Patients affected by drusen represent a different sub-phenotype. Genetic examination is recommended for a correct clinical management.
- Published
- 2021
36. Phenotypic and Genetic Spectrum of Autosomal Recessive Bestrophinopathy and Best Vitelliform Macular Dystrophy
- Author
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Laryssa A. Huryn, Wadih M. Zein, Robert B. Hufnagel, Ramiro S. Maldonado, Catherine A Cukras, Tyler Pfister, and H. N. Sen
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0301 basic medicine ,Adult ,Male ,genetic structures ,DNA Mutational Analysis ,Visual Acuity ,Color Vision Defects ,Vitelliform macular dystrophy ,Disease ,03 medical and health sciences ,bestrophinopathy ,Young Adult ,0302 clinical medicine ,genetic diseases ,Meta-Analysis as Topic ,Retinal Diseases ,BEST1 ,Genotype ,Genetics ,Electroretinography ,Medicine ,Humans ,Bestrophins ,Child ,business.industry ,Disease spectrum ,Eye Diseases, Hereditary ,Middle Aged ,medicine.disease ,Phenotype ,Pedigree ,Vitelliform Macular Dystrophy ,Best Vitelliform Macular Dystrophy ,Electrooculography ,030104 developmental biology ,Meta-analysis ,Child, Preschool ,Mutation ,030221 ophthalmology & optometry ,Female ,business ,Autosomal recessive bestrophinopathy ,Tomography, Optical Coherence - Abstract
Purpose Autosomal recessive bestrophinopathy (ARB) and vitelliform macular dystrophy (VMD) are distinct phenotypes, typically inherited through recessive and dominant patterns, respectively. Recessively inherited VMD (arVMD) has been reported, suggesting that dominant and recessive BEST1-related retinopathies represent a single disease spectrum. This study compares adVMD, arVMD, and ARB to determine whether a continuum exists and to define clinical and genetic features to aid diagnosis and management. Methods One arVMD patient and nine ARB patients underwent standard ophthalmic examination, imaging, electrophysiology, and genetic assessments. A meta-analysis of reported BEST1 variants was compiled, and clinical parameters were analyzed with regard to inheritance and phenotype. Results Among 10 patients with biallelic BEST1 variants, three novel ARB variants (p.Asp118Ala, p.Leu224Gln, p.Val273del) were discovered. A patient with homozygous p.Glu35Lys was clinically unique, presenting with VMD, including hyperautofluorescence extending beyond the macula, peripheral punctate lesions, and shortened axial-length. A tritan-axis color vision deficit was seen in three of six (50%) of ARB patients. Attempts to distinguish recessively-inherited ARB and dominantly-inherited VMD genotypically, by variant frequency and residue location, did not yield significant differences. Literature meta-analysis with principle component analysis of clinical features demonstrated a spectrum of disease with arVMD falling between adVMD and ARB. Conclusions This study suggests that arVMD is part of a continuum of autosomal recessive and dominant BEST1-related retinopathies. Detailed clinical and molecular assessments of this cohort and the literature are corroborated by unsupervised analysis, highlighting the overlapping heterogeneity among BEST1-associated clinical diagnoses. Tritan-axis color vision deficit is a previously unreported finding associated with ARB.
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- 2021
37. Long-Range PCR-Based NGS Applications to Diagnose Mendelian Retinal Diseases
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James V M Hanson, Christina Gerth-Kahlert, Jordi Maggi, Alessandro Maspoli, Fatma Kivrak Pfiffner, Luzy Bähr, Wolfgang Berger, Silke Feil, Samuel Koller, University of Zurich, and Berger, Wolfgang
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0301 basic medicine ,Proband ,Male ,BEST1 ,Peripherins ,1607 Spectroscopy ,Compound heterozygosity ,ABCA4 ,Polymerase Chain Reaction ,law.invention ,lcsh:Chemistry ,11124 Institute of Medical Molecular Genetics ,0302 clinical medicine ,Missing heritability problem ,law ,diagnostics ,Copy-number variation ,Bestrophins ,Child ,lcsh:QH301-705.5 ,Spectroscopy ,Polymerase chain reaction ,Genetics ,PRPH2 ,medicine.diagnostic_test ,High-Throughput Nucleotide Sequencing ,General Medicine ,sequencing ,Amplicon ,Middle Aged ,Computer Science Applications ,NGS ,Child, Preschool ,Female ,1606 Physical and Theoretical Chemistry ,Microtubule-Associated Proteins ,genetic testing ,retinal diseases ,long-range PCR ,CNV ,phasing ,missing heritability ,10018 Ophthalmology Clinic ,Adult ,Adolescent ,DNA Copy Number Variations ,1503 Catalysis ,Cyclic Nucleotide-Gated Cation Channels ,610 Medicine & health ,Nerve Tissue Proteins ,Biology ,Catalysis ,Article ,Inorganic Chemistry ,03 medical and health sciences ,Young Adult ,Retinal Diseases ,1312 Molecular Biology ,1706 Computer Science Applications ,medicine ,Humans ,Physical and Theoretical Chemistry ,Eye Proteins ,Molecular Biology ,Genetic testing ,Aged ,1604 Inorganic Chemistry ,Organic Chemistry ,Breakpoint ,Infant, Newborn ,Infant ,Membrane Proteins ,Sequence Analysis, DNA ,030104 developmental biology ,lcsh:Biology (General) ,lcsh:QD1-999 ,Mutation ,030221 ophthalmology & optometry ,570 Life sciences ,biology ,ATP-Binding Cassette Transporters ,1605 Organic Chemistry - Abstract
The purpose of this study was to develop a flexible, cost-efficient, next-generation sequencing (NGS) protocol for genetic testing. Long-range polymerase chain reaction (PCR) amplicons of up to 20 kb in size were designed to amplify entire genomic regions for a panel (n = 35) of inherited retinal disease (IRD)-associated loci. Amplicons were pooled and sequenced by NGS. The analysis was applied to 227 probands diagnosed with IRD: (A) 108 previously molecularly diagnosed, (B) 94 without previous genetic testing, and (C) 25 undiagnosed after whole-exome sequencing (WES). The method was validated with 100% sensitivity on cohort A. Long-range PCR-based sequencing revealed likely causative variant(s) in 51% and 24% of proband from cohorts B and C, respectively. Breakpoints of 3 copy number variants (CNVs) could be characterized. Long-range PCR libraries spike-in extended coverage of WES. Read phasing confirmed compound heterozygosity in 5 probands. The proposed sequencing protocol provided deep coverage of the entire gene, including intronic and promoter regions. Our method can be used (i) as a first-tier assay to reduce genetic testing costs, (ii) to elucidate missing heritability cases, (iii) to characterize breakpoints of CNVs at nucleotide resolution, (iv) to extend WES data to non-coding regions by spiking-in long-range PCR libraries, and (v) to help with phasing of candidate variants., International Journal of Molecular Sciences, 22 (4), ISSN:1422-0067
- Published
- 2021
38. Clinical Heterogeneity in Autosomal Recessive Bestrophinopathy with Biallelic Mutations in the BEST1 Gene
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Carsten Framme, Herbert Jägle, Bernhard H. F. Weber, Katerina Hufendiek, Karsten Hufendiek, Marius Book, Agnes B. Renner, Günay Rustambayova, Heidi Stöhr, Georg Spital, and Ulrich Kellner
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0301 basic medicine ,medicine.medical_specialty ,autosomal recessive bestrophinopathy (ARB), inherited retinal dystrophy ,BEST1 ,Visual acuity ,phenotyping ,genetic structures ,Posterior pole ,autosomal recessive bestrophinopathy (ARB) ,urologic and male genital diseases ,Catalysis ,Serous Retinal Detachment ,lcsh:Chemistry ,Inorganic Chemistry ,Lesion ,03 medical and health sciences ,0302 clinical medicine ,Ophthalmology ,medicine ,cardiovascular diseases ,bestrophin-1 ,Physical and Theoretical Chemistry ,lcsh:QH301-705.5 ,Molecular Biology ,Spectroscopy ,optical coherence tomography ,medicine.diagnostic_test ,fundus autofluorescence ,business.industry ,Organic Chemistry ,Fundus photography ,General Medicine ,Phenotype ,eye diseases ,female genital diseases and pregnancy complications ,inherited retinal dystrophy ,Computer Science Applications ,030104 developmental biology ,lcsh:Biology (General) ,lcsh:QD1-999 ,030221 ophthalmology & optometry ,sense organs ,medicine.symptom ,Age of onset ,business ,Autosomal recessive bestrophinopathy ,hormones, hormone substitutes, and hormone antagonists - Abstract
Autosomal recessive bestrophinopathy (ARB) has been reported as clinically heterogeneous. Eighteen patients (mean age: 22.5 years, 15 unrelated families) underwent ophthalmological examination, fundus photography, fundus autofluorescence, and optical coherence tomography (OCT). Molecular genetic testing of the BEST1 gene was conducted by the chain-terminating dideoxynucleotide Sanger methodology. Onset of symptoms (3 to 50 years of age) and best-corrected visual acuity (0.02&ndash, 1.0) were highly variable. Ophthalmoscopic and retinal imaging defined five phenotypes. Phenotype I presented with single or confluent yellow lesions at the posterior pole and midperiphery, serous retinal detachment, and intraretinal cystoid spaces. In phenotype II fleck-like lesions were smaller and extended to the far periphery. Phenotype III showed a widespread continuous lesion with sharp peripheral demarcation. Single (phenotype IV) or multifocal (phenotype V) vitelliform macular dystrophy-like lesions were observed as well. Phenotypes varied within families and in two eyes of one patient. In addition, OCT detected hyperreflective foci (13/36 eyes) and choroidal excavation (11/36). Biallelic mutations were identified in each patient, six of which have not been reported so far [c.454C>, T/p.(Pro152Ser), c.620T>, A/p.(Leu207His), c.287_298del/p.(Gln96_Asn99del), c.199_200del/p.(Leu67Valfs*164), c.524del/p.(Ser175Thrfs*19), c.590_615del/p.(Leu197Profs*26)]. BEST1-associated ARB presents with a variable age of onset and clinical findings, that can be categorized in 5 clinical phenotypes. Hyperreflective foci and choroidal excavation frequently develop as secondary manifestations.
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- 2020
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39. Autosomal Dominant Vitreoretinochoroidopathy With a Novel BEST1 Mutation and a Review of Reported Mutations.
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Komro J, Skender S, Ross BX, and Lin X
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Here we describe a patient with atypical presentation of autosomal dominant vitreoretinochoroidopathy (ADVIRC) with a novel missense mutation in BEST1 gene and briefly review reported ADVIRC-associated genetic mutations. The patient is a 71-year-old African American female who presented with progressively worsening blurry vision bilaterally over the course of 40 years, with significant deterioration in both peripheral and central vision in the past five years. Her anterior segment exam was unremarkable. Fundoscopic examination showed confluent, demarcated areas of pigmentary chorioretinal atrophy in the mid-periphery of the retina with sparing of the macula in both eyes. Optical coherence tomography (OCT) of the lesions revealed flattening of the fovea with an elevation of the inner retinal structures and outer plexiform layer, and peripheral retinal thinning and loss of retinal structures with choroid hyperreflectivity, consistent with peripheral chorioretinal atrophy. Genetic testing identified a heterozygous c.830C>T, p.(T277M) mutation located on exon 7 of the BEST1 gene. This patient represents an atypical presentation of ADVIRC with more posterior involvement, and this case is associated with a novel missense mutation in the BEST1 gene., Competing Interests: The authors have declared that no competing interests exist., (Copyright © 2022, Komro et al.)
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- 2022
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40. Mutation spectrum of the bestrophin-1 gene in a large Chinese cohort with bestrophinopathy
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Gao, Feng-Juan, Qi, Yu-He, Hu, Fang-Yuan, Wang, Dan-Dan, Xu, Ping, Guo, Jing-Li, Li, Jian-Kang, Zhang, Yong-Jin, Li, Wei, Chen, Fang, Xu, Ge-Zhi, Liu, Wei, Chang, Qing, Wu, Ji-Hong, Gao, Feng-Juan, Qi, Yu-He, Hu, Fang-Yuan, Wang, Dan-Dan, Xu, Ping, Guo, Jing-Li, Li, Jian-Kang, Zhang, Yong-Jin, Li, Wei, Chen, Fang, Xu, Ge-Zhi, Liu, Wei, Chang, Qing, and Wu, Ji-Hong
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Background: Bestrophin-1 (BEST1) gene is associated with a wide range of ocular phenotypes, collectively termed as bestrophinopathy. The aim of the current study was to identify the mutation spectrum of BEST1 in a large cohort of Chinese patients with bestrophinopathy. Methods: Patients clinically suspected of bestrophinopathy were screened using multigene panel testing. All BEST1 variants were confirmed by Sanger sequencing, and validated in the families. Findings: A total of 92 patients (Best vitelliform macular dystrophy (BVMD)=77; autosomal recessive bestrophinopathy (ARB)=15) from 58 unrelated families of Chinese origin and their available family members (n=65) were recruited. Overall, 39 distinct disease-causing BEST1 variants were identified, including 13 novel variants, and two reported variants but novel for ARB. Of them, 14 were associated with ARB, 23 with BVMD and two (c.604C>T and c.898G>A) with both BVMD and ARB. Most mutations associated with BVMD were missense (97.78%), while ARB was associated with more complex mutations, including missense (88.46%), splicing effect (3.85%), and frameshifts (15.38%). BEST1 hotspots were c.898G>A and c.584C>T among BVMD and ARB patients, respectively. Hot regions were located in exons 8, 2 and 6 in BVMD patients, and in exons 5 and 7 in ARB patients. The overall penetrance of BEST1 in our cohort was 71.30%, no de novo mutations were identified. Conclusion: This is the largest study to date that provides major population-based data of the BEST1 mutation spectrum in China. Our results can serve as a well-founded reference for genetic counselling for patients with bestrophinopathy of Chinese origin.
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- 2020
41. Best's macular dystrophy in Australia: phenotypic profile and identification of novel BEST1 mutations.
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Cohn, A. C., Turnbull, C., Ruddle, J. B., Guymer, R. H., Kearns, L. S., Staffieri, S., Daggett, H. T., Hewitt, A. W., and Mackey, D. A.
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- *
DYSTROPHY , *VISUAL acuity , *GENETIC mutation , *RETINITIS pigmentosa , *GENETICS ,DIAGNOSIS of eye diseases - Abstract
Purpose(1) To evaluate the spectrum of BEST1mutations within Australian Best Disease or vitelliform macular dystrophy (VMD) pedigrees, including any novel mutations; (2) to analyse the range of clinical presentations of this cohort; (3) to determine any possible genotype-phenotype correlations and (4) to compare clinical data of patients with phenotypic VMD, both with and without a BEST1mutation.Patients and methodsPatients with suspected VMD were referred to clinical centres for ophthalmological assessment and genetic screening. When a mutation was identified in a proband, further family members were invited for clinical and genetic screening.ResultsWe identified 42 patients with one of 13 BEST1mutations. Seven mutations were novel. There were a further 14 probands in whom a BEST1mutation was not identified. Median visual acuity in both VMD (mutation positive) and clinical VMD (no BEST1mutation identified) groups reached driving standards (6/12 or better).ConclusionWe did not identify any firm genotype-phenotype correlations in our Australian VMD pedigrees, in which there was a spectrum of BEST1mutations and marked variation in clinical presentation. Genetic screening remains the gold standard for VMD diagnosis. Patients should be counselled that visual acuity might remain at or above driving standards in at least one eye even in the presence of a BEST1mutation. [ABSTRACT FROM AUTHOR]
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- 2011
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42. Clinical and Genetic Findings of Autosomal Recessive Bestrophinopathy (ARB)
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Ahmed Turki, Yosra Falfoul, Stefan Wyrsch, Maria Helfenstein, Margarita G. Todorova, Daniel F. Schorderet, Imen Habibi, Veronika Vaclavik, Khaled El Matri, and Leila El Matri
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0301 basic medicine ,Male ,Visual acuity ,genetic structures ,Eye ,EOG light rise ,0302 clinical medicine ,BEST1 ,Medicine ,Bestrophins ,Child ,Genetics (clinical) ,Bestrophinopathy ,Eye Diseases, Hereditary ,Phenotype ,Molecular analysis ,Pedigree ,best1 ,medicine.anatomical_structure ,Female ,medicine.symptom ,Autosomal recessive bestrophinopathy ,Optic disc ,Adult ,medicine.medical_specialty ,Adolescent ,lcsh:QH426-470 ,phenotype ,Retinitis ,arb ,Article ,03 medical and health sciences ,Young Adult ,bestrophinopathy ,Retinal Diseases ,vitelliform macular dystrophy ,Ophthalmology ,Genetics ,Electroretinography ,Humans ,Genetic Association Studies ,business.industry ,Correction ,mutations ,medicine.disease ,eye diseases ,Electrooculography ,lcsh:Genetics ,best1 gene ,030104 developmental biology ,Mutation ,030221 ophthalmology & optometry ,sense organs ,business - Abstract
Mutations in BEST1 cause several phenotypes including autosomal dominant (AD) Best vitelliform macular dystrophy type 2 (BVMD), AD vitreo-retino-choroidopathy (ADVIRC), and retinitis pigmentosa-50 (RP50). A rare subtype of Bestrophinopathy exists with biallelic mutations in BEST1. Its frequency is estimated to be 1/1,000,000 individuals. Here we report 6 families and searched for a genotype-phenotype correlation. All patients were referred due to reduced best-corrected visual acuity (BCVA), ranging from 0.1/10 to 3/10. They all showed vitelliform lesions located at the macula, sometimes extending into the midperiphery, along the vessels and the optic disc. Onset of the disease varied from the age of 3 to 25 years. Electrooculogram (EOG) revealed reduction in the EOG light rise in all patients. Molecular analysis revealed previously reported mutations p.(E35K), (E35K), p.(L31M), (L31M), p.(R141H), (A195V), p.(R202W), (R202W), and p.(Q220*), (Q220*) in five families. One family showed a novel mutation: p.(E167G), (E167G). All mutations were heterozygous in the parents. In one family, heterozygous children showed various reductions in the EOG light rise and autofluorescent deposits. Autosomal recessive Bestrophinopathy (ARB), although rare, can be recognized by its phenotype and should be validated by molecular analysis. Genotype-phenotype correlations are difficult to establish and will require the analysis of additional cases.
- Published
- 2019
43. A Quantitative Chloride Channel Conductance Assay for Efficacy Testing of AAV.BEST1
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Michelle E. McClements, Maria I. Patrício, Carolina Uggenti, Robert E MacLaren, Shaun Roger Wood, Sumathi Sekaran, Forbes D C Manson, Cristina Martinez-Fernandez de la Camara, and Alun R. Barnard
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0106 biological sciences ,Genetic enhancement ,Genetic Vectors ,01 natural sciences ,Applied Microbiology and Biotechnology ,Chloride ,03 medical and health sciences ,Transduction (genetics) ,Western blot ,BEST1 ,Parvovirinae ,Transduction, Genetic ,010608 biotechnology ,Genetics ,medicine ,Humans ,Bestrophins ,Genetics (clinical) ,030304 developmental biology ,Pharmacology ,0303 health sciences ,Retinal pigment epithelium ,biology ,medicine.diagnostic_test ,HEK 293 cells ,AAV ,Gene Therapy ,Dependovirus ,Cell biology ,Ophthalmology ,Bestrophin 1 ,medicine.anatomical_structure ,HEK293 Cells ,Bestrophin-1 ,biology.protein ,Chloride channel ,Molecular Medicine ,medicine.drug - Abstract
Mutations in the human BEST1 gene are responsible for a number of distinct retinal disorders known as 'bestrophinopathies', for which there are no current treatments. The protein product, bestrophin-1, is expressed in the retinal pigment epithelium (RPE) where it localises to the basolateral membrane and acts as a Ca2+-activated chloride channel. Recent studies have shown successful BEST1-mediated gene transfer to the RPE, indicating human clinical trials of BEST1 gene therapy may be on the horizon. A critical aspect of such trials is the ability to assess the efficacy of vector prior to patient administration. Here, we present an assay that enables the quantitative assessment of AAV-mediated BEST1 chloride conductance as a measure of vector efficacy. Expression of BEST1 following transduction of HEK293 cells with AAV.BEST1 vectors was confirmed by liquid chromatography, western blot and immunocytochemistry. Whole-cell patch-clamp showed increased chloride conductance in BEST1-transduced cells compared to sham-transduced and untransduced controls. Exogenous chloride current correlated to BEST1 expression level, with an enhanced AAV.BEST1.WPRE vector providing higher expression levels of BEST1 and increased in chloride conductance. This study presents in vitro electrophysical quantification of bestrophin-1 following AAV-mediated gene transfer, providing vital functional data on an AAV gene therapy product which will support a future application for regulatory approval.
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- 2019
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44. Autosomal Recessive Bestrophinopathy Presenting With a Macular Hole Retinal Detachment.
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Fouad YA, Tawfik CA, and Nowara M
- Abstract
Purpose: To report a case of autosomal recessive bestrophinopathy (ARB) that presented with macular hole retinal detachment (MHRD). Methods: A case report. Results: A 31-year-old male patient presented with rapid deterioration of vision in the left eye. On fundus examination, bilateral retinal deposits in both eyes, which were brightly hyperautofluorescent, and an MHRD in the left eye could be detected. An electrooculogram demonstrated absent light rise with abnormal Arden's ratio in both eyes. The patient was offered surgery for the MHRD but refused due to the guarded visual prognosis. Follow up of the patient after one year revealed progression of the retinal detachment. Genetic testing revealed a novel, homozygous missense mutation in the BEST1 gene, confirming the diagnosis of ARB. Conclusion: ARB can present with an MHRD. Counseling patients with inherited retinal dystrophies about the visual prognosis following surgical intervention is important., Competing Interests: The author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article., (© The Author(s) 2022.)
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- 2022
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45. Multimodal imaging and genetic analysis of adult-onset best vitelliform macular dystrophy in Chinese patients.
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Lin, Ying, Li, Tao, Liu, Bingqian, Lyu, Cancan, Lian, Yu, Li, Jizhu, Huang, Ying, Li, Haichun, Wu, Qingxiu, Jin, Chenjin, and Lu, Lin
- Subjects
CHINESE people ,IMAGE analysis ,DYSTROPHY ,OPTICAL coherence tomography ,FLUORESCENCE angiography ,CORNEAL dystrophies ,GENETIC mutation - Abstract
Compared to juvenile-onset best vitelliform macular dystrophy (BVMD), adult-onset BVMD is not well characterized and lacks strict diagnostic criteria. The present study aimed to evaluate the clinical and genetic characteristics of four advanced-age Chinese patients with adult-onset BVMD by combining multimodal imaging and genetic analysis. The four patients (all older than 50 years) were diagnosed with adult-onset BVMD at Zhongshan Ophthalmic Center (Guangzhou, China). Comprehensive ophthalmic examinations were performed, including analyses of best-corrected visual acuity, intraocular pressure, slit-lamp examination, fundus photography, optical coherence tomography, fundus fluorescein angiography and electrooculography. Genomic DNA was extracted from leukocytes isolated from peripheral blood obtained from these patients, their family members and 200 unrelated subjects from the same population. A total of 11 exons of the bestrophin-1 (BEST1) gene were amplified using PCR and sequenced. All of the four patients presented with lesions in the macular area. The patients were diagnosed with adult-onset BVMD based on multimodal imaging and genetic analysis. A total of four recurrent mutations, namely c.763C>T (p.Arg255Trp, p.R255W) in exon 7, c.584C>T (p.Ala195Val, p.A195V) in exon 5, c.910_912del GAT (p.304delAsp, p.D304del) in exon 8 and c.310G>C (p.Asp104His, p.D104H) in exon 4 of BEST1, were identified. Sorting intolerant from tolerant predicted that the amino acid substitutions p.R255W, p.A195V and p.D104H in the BEST1 protein were causing the damage. Combining multimodal imaging and genetic analysis was helpful in confirming the diagnosis of patients with adult-onset BVMD. These results maybe valuable for clinical and genetic counseling and for the development of therapeutic interventions for patients with BVMD. [ABSTRACT FROM AUTHOR]
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- 2021
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46. Bestrophinopathies: perspectives on clinical disease, Bestrophin-1 function and developing therapies
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Amanda-Jayne F. Carr, Simranjeet Singh Grewal, and Joseph J Smith
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0301 basic medicine ,induced pluripotent stem cells ,Genetic enhancement ,Review ,Bioinformatics ,03 medical and health sciences ,0302 clinical medicine ,lcsh:Ophthalmology ,BEST1 ,medicine ,Expressivity (genetics) ,Induced pluripotent stem cell ,Pathological ,Retinal pigment epithelium ,biology ,gene editing ,business.industry ,gene therapy ,Penetrance ,030104 developmental biology ,medicine.anatomical_structure ,Bestrophin 1 ,lcsh:RE1-994 ,CRISPR ,bestrophinopathies ,030221 ophthalmology & optometry ,biology.protein ,Rare Eye Diseases – Looking Outside the Box ,sense organs ,business ,Retinal Dystrophies - Abstract
Bestrophinopathies are a group of clinically distinct inherited retinal dystrophies that typically affect the macular region, an area synonymous with central high acuity vision. This spectrum of disorders is caused by mutations in bestrophin1 ( BEST1), a protein thought to act as a Ca2+-activated Cl-channel in the retinal pigment epithelium (RPE) of the eye. Although bestrophinopathies are rare, over 250 individual pathological mutations have been identified in the BEST1 gene, with many reported to have various clinical expressivity and incomplete penetrance. With no current clinical treatments available for patients with bestrophinopathies, understanding the role of BEST1 in cells and the pathological pathways underlying disease has become a priority. Induced pluripotent stem cell (iPSC) technology is helping to uncover disease mechanisms and develop treatments for RPE diseases, like bestrophinopathies. Here, we provide a comprehensive review of the pathophysiology of bestrophinopathies and highlight how patient-derived iPSC-RPE are being used to test new genomic therapies in vitro.
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- 2021
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47. Patient-specific mutations impair BESTROPHIN1’s essential role in mediating Ca2+-dependent Cl- currents in human RPE
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Stephen H. Tsang, Shoudeng Chen, Alec Kittredge, Tingting Yang, Yu Xu, Yu Zhang, Nancy Ward, and Yao Li
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Male ,Models, Molecular ,0301 basic medicine ,Bestrophins ,Protein Conformation ,Structural Biology and Molecular Biophysics ,Mutant ,Retinal Pigment Epithelium ,Disease ,Crystallography, X-Ray ,chemistry.chemical_compound ,0302 clinical medicine ,BEST1 ,retinal pigment epithelium (RPE) ,Biology (General) ,Child ,Cells, Cultured ,Genetics ,General Neuroscience ,General Medicine ,Patient specific ,Phenotype ,Cell biology ,retinal diseases ,medicine.anatomical_structure ,patient-specific iPSC-RPE ,Medicine ,Research Article ,Human ,QH301-705.5 ,Science ,Biophysics ,Mutation, Missense ,Biology ,General Biochemistry, Genetics and Molecular Biology ,calcium-activated chloride channel (CaCC) ,03 medical and health sciences ,Chlorides ,medicine ,Humans ,Aged ,Ions ,Retinal pigment epithelium ,General Immunology and Microbiology ,Retinal ,BESTROPHIN1 ,Electrophysiology ,030104 developmental biology ,chemistry ,Structural biology ,Calcium ,Mutant Proteins ,030217 neurology & neurosurgery - Abstract
Mutations in the human BEST1 gene lead to retinal degenerative diseases displaying progressive vision loss and even blindness. BESTROPHIN1, encoded by BEST1, is predominantly expressed in retinal pigment epithelium (RPE), but its physiological role has been a mystery for the last two decades. Using a patient-specific iPSC-based disease model and interdisciplinary approaches, we comprehensively analyzed two distinct BEST1 patient mutations, and discovered mechanistic correlations between patient clinical phenotypes, electrophysiology in their RPEs, and the structure and function of BESTROPHIN1 mutant channels. Our results revealed that the disease-causing mechanism of BEST1 mutations is centered on the indispensable role of BESTROPHIN1 in mediating the long speculated Ca2+-dependent Cl- current in RPE, and demonstrate that the pathological potential of BEST1 mutations can be evaluated and predicted with our iPSC-based ‘disease-in-a-dish’ approach. Moreover, we demonstrated that patient RPE is rescuable with viral gene supplementation, providing a proof-of-concept for curing BEST1-associated diseases., eLife digest Mutations to the gene that encodes a protein called BESTROPHIN1 cause a number of human diseases that lead to a progressive loss of sight and even blindness. Over two hundred of these disease-causing mutations exist, but it is not understood how they affect BESTROPHIN1. Furthermore, there are currently no treatments available to treat these diseases. BESTROPHIN1 is an ion channel found in cell membranes in the retinal pigment epithelium (RPE), a layer of cells in the eye that is vital for vision. When BESTROPHIN1 is stimulated by calcium ions, it opens up to allow chloride ions to flow into and out of the cell. The health of human eyes can be assessed by measuring how well they respond to light – a response that is believed to be generated from the flow of calcium-stimulated chloride ions in the RPE. Patients with mutant BESTROPHIN1 channels have an abnormally low response to light, but it remains unclear whether these channels are responsible for maintaining the flow of chloride ions required for the light response. Indeed, it is not confirmed whether calcium-stimulated chloride flow occurs on the surface of normal human RPE cells at all. Human RPE cells are difficult to obtain. Instead, Li, Zhang et al. took human skin cells – some from patients who had disease-causing mutations that affect BESTROPHIN1 – and used stem cell technology to coax the cells to develop into RPE cells. Calcium-stimulated chloride ion flow could be recorded on the surface of these cells. Next, the impact of two disease-causing mutations on BESTROPHIN1 was examined. The mutation from the patient who displayed the more severe illness completely inactivated the channel, while the other associated with milder illness caused a partial loss of channel activity. Notably, introducing normal BESTROPHIN1 into the RPE cells developed from patients with mutant BESTRPOPHIN1 restored chloride ion flow to normal levels. Thus it appears that BESTROPHIN1 is essential for maintaining calcium-stimulated chloride ion flow in human RPE cells. The techniques developed by Li, Zhang et al. form a patient-specific ‘disease-in-a-dish’ approach that could be used to study the consequences of other mutations to the gene that produces BESTROPHIN1. This work also suggests that gene therapy could potentially help to treat BESTROPHIN1-related diseases.
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- 2017
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48. Mutation-Dependent Pathomechanisms Determine the Phenotype in the Bestrophinopathies
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Caroline Brandl, Lisa M. J. Duerr, Anna-Lena Nachtigal, Philipp Herrmann, Heidi L. Schulz, Ulrich Kellner, Andrea Milenkovic, Bernhard H. F. Weber, Charlotte Reiff, and Gabrielle E. Lang
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0301 basic medicine ,induced pluripotent stem cell ,Mutant ,retinal pigment epithelium ,Vitelliform macular dystrophy ,Pathology ,medicine.disease_cause ,endo-lysosomal degradation pathway ,ER-associated degradation ,lcsh:Chemistry ,Best vitelliform macular dystrophy ,DDC 570 / Life sciences ,0302 clinical medicine ,BEST1 ,Mutant protein ,Homeostasis ,bestrophin-1 ,Bestrophins ,Induced pluripotent stem cell ,lcsh:QH301-705.5 ,Spectroscopy ,Mutation ,biology ,Chemistry ,Retinal Degeneration ,Eye Diseases, Hereditary ,General Medicine ,Hydrogen-Ion Concentration ,autosomal dominant vitreoretinochoroidopathy ,Phenotype ,Vitelliform Macular Dystrophy ,Computer Science Applications ,Cell biology ,Induced pluripotent stem cells ,medicine.anatomical_structure ,pathomechanism ,Autosomal recessive bestrophinopathy ,Induced Pluripotent Stem Cells ,Genes, Recessive ,Retina ,Article ,Catalysis ,Cell Line ,Inorganic Chemistry ,03 medical and health sciences ,Retinal Diseases ,ddc:570 ,medicine ,Humans ,Genetic Predisposition to Disease ,ddc:610 ,Physical and Theoretical Chemistry ,Molecular Biology ,Retinal pigment epithelium ,autosomal recessive bestrophinopathy ,Organic Chemistry ,Choroid Diseases ,030104 developmental biology ,Bestrophin 1 ,Makuladegeneration ,lcsh:Biology (General) ,lcsh:QD1-999 ,Induzierte pluripotente Stammzelle ,Best disease ,030221 ophthalmology & optometry ,biology.protein ,DDC 610 / Medicine & health ,Pathomechanismus - Abstract
Best vitelliform macular dystrophy (BD), autosomal dominant vitreoretinochoroidopathy (ADVIRC), and the autosomal recessive bestrophinopathy (ARB), together known as the bestrophinopathies, are caused by mutations in the bestrophin-1 (BEST1) gene affecting anion transport through the plasma membrane of the retinal pigment epithelium (RPE). To date, while no treatment exists a better understanding of BEST1-related pathogenesis may help to define therapeutic targets. Here, we systematically characterize functional consequences of mutant BEST1 in thirteen RPE patient cell lines differentiated from human induced pluripotent stem cells (hiPSCs). Both BD and ARB hiPSC-RPEs display a strong reduction of BEST1-mediated anion transport function compared to control, while ADVIRC mutations trigger an increased anion permeability suggesting a stabilized open state condition of channel gating. Furthermore, BD and ARB hiPSC-RPEs differ by the degree of mutant protein turnover and by the site of subcellular protein quality control with adverse effects on lysosomal pH only in the BD-related cell lines. The latter finding is consistent with an altered processing of catalytic enzymes in the lysosomes. The present study provides a deeper insight into distinct molecular mechanisms of the three bestrophinopathies facilitating functional categorization of the more than 300 known BEST1 mutations that result into the distinct retinal phenotypes.
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- 2020
- Full Text
- View/download PDF
49. Long-Range PCR-Based NGS Applications to Diagnose Mendelian Retinal Diseases.
- Author
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Maggi, Jordi, Koller, Samuel, Bähr, Luzy, Feil, Silke, Kivrak Pfiffner, Fatma, Hanson, James V. M., Maspoli, Alessandro, Gerth-Kahlert, Christina, Berger, Wolfgang, and Żarnowski, Tomasz
- Subjects
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RETINAL diseases , *DNA copy number variations , *GENETIC testing , *PROMOTERS (Genetics) , *POLYMERASE chain reaction , *HETEROZYGOSITY , *EXOMES - Abstract
The purpose of this study was to develop a flexible, cost-efficient, next-generation sequencing (NGS) protocol for genetic testing. Long-range polymerase chain reaction (PCR) amplicons of up to 20 kb in size were designed to amplify entire genomic regions for a panel (n = 35) of inherited retinal disease (IRD)-associated loci. Amplicons were pooled and sequenced by NGS. The analysis was applied to 227 probands diagnosed with IRD: (A) 108 previously molecularly diagnosed, (B) 94 without previous genetic testing, and (C) 25 undiagnosed after whole-exome sequencing (WES). The method was validated with 100% sensitivity on cohort A. Long-range PCR-based sequencing revealed likely causative variant(s) in 51% and 24% of proband from cohorts B and C, respectively. Breakpoints of 3 copy number variants (CNVs) could be characterized. Long-range PCR libraries spike-in extended coverage of WES. Read phasing confirmed compound heterozygosity in 5 probands. The proposed sequencing protocol provided deep coverage of the entire gene, including intronic and promoter regions. Our method can be used (i) as a first-tier assay to reduce genetic testing costs, (ii) to elucidate missing heritability cases, (iii) to characterize breakpoints of CNVs at nucleotide resolution, (iv) to extend WES data to non-coding regions by spiking-in long-range PCR libraries, and (v) to help with phasing of candidate variants. [ABSTRACT FROM AUTHOR]
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- 2021
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- View/download PDF
50. Clinical Heterogeneity in Autosomal Recessive Bestrophinopathy with Biallelic Mutations in the BEST1 Gene.
- Author
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Hufendiek, Karsten, Hufendiek, Katerina, Jägle, Herbert, Stöhr, Heidi, Book, Marius, Spital, Georg, Rustambayova, Günay, Framme, Carsten, Weber, Bernhard H. F., Renner, Agnes B., and Kellner, Ulrich
- Subjects
OPTICAL coherence tomography ,GENETIC mutation ,PHENOTYPES ,MEDICAL photography ,RETINAL imaging ,RETINAL detachment ,DYSTROPHY ,INTRAOCULAR lenses - Abstract
Autosomal recessive bestrophinopathy (ARB) has been reported as clinically heterogeneous. Eighteen patients (mean age: 22.5 years; 15 unrelated families) underwent ophthalmological examination, fundus photography, fundus autofluorescence, and optical coherence tomography (OCT). Molecular genetic testing of the BEST1 gene was conducted by the chain-terminating dideoxynucleotide Sanger methodology. Onset of symptoms (3 to 50 years of age) and best-corrected visual acuity (0.02–1.0) were highly variable. Ophthalmoscopic and retinal imaging defined five phenotypes. Phenotype I presented with single or confluent yellow lesions at the posterior pole and midperiphery, serous retinal detachment, and intraretinal cystoid spaces. In phenotype II fleck-like lesions were smaller and extended to the far periphery. Phenotype III showed a widespread continuous lesion with sharp peripheral demarcation. Single (phenotype IV) or multifocal (phenotype V) vitelliform macular dystrophy-like lesions were observed as well. Phenotypes varied within families and in two eyes of one patient. In addition, OCT detected hyperreflective foci (13/36 eyes) and choroidal excavation (11/36). Biallelic mutations were identified in each patient, six of which have not been reported so far [c.454C>T/p.(Pro152Ser), c.620T>A/p.(Leu207His), c.287_298del/p.(Gln96_Asn99del), c.199_200del/p.(Leu67Valfs*164), c.524del/p.(Ser175Thrfs*19), c.590_615del/p.(Leu197Profs*26)]. BEST1-associated ARB presents with a variable age of onset and clinical findings, that can be categorized in 5 clinical phenotypes. Hyperreflective foci and choroidal excavation frequently develop as secondary manifestations. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
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