8 results on '"Albrieux F"'
Search Results
2. Optical and Structural Properties of Copper−Oxytocin Dications in the Gas Phase
- Author
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Joly, L, Antoine, R, Albrieux, F, Ballivian, R, Broyer, M, Chirot, F, Lemoine, J, Dugourd, P, Greco, C, Mitric, R, Bonacic Koutecky, V, Bonacic Koutecky, V., GRECO, CLAUDIO, Joly, L, Antoine, R, Albrieux, F, Ballivian, R, Broyer, M, Chirot, F, Lemoine, J, Dugourd, P, Greco, C, Mitric, R, Bonacic Koutecky, V, Bonacic Koutecky, V., and GRECO, CLAUDIO
- Abstract
We present a joint experimental and theoretical investigation of the structural and optical properties of copper-oxytocin dications in the gas phase. Ion mobility and UV photodissociation experiments were performed, allowing the investigation of the influence of the Cu2+ ion on the structural and optical properties of oxytocin. Density functional theory calculations were performed to find low energy structures for the bare and complexed peptide and to characterize optical spectral features. Copper complexation induces a drastic change in the structure of the oxytocin peptide. In particular, we predict a 4N chelation of the copper cation which leads to a contraction of the oxytocin ring. The gas phase lowest-energy structures are compared with the X-ray crystal structure of the oxytocin molecule bound to its receptor protein. The optical spectrum of oxytocin complexed with the copper cation displays a global enhancement of the photofragmentation yield as compared to the one recorded for the doubly protonated oxytocin. Moreover, experimental and calculated optical spectra of protonated tyrosine have also been determined, since its leading features are present in oxytocin as well. © 2009 American Chemical Society.
- Published
- 2009
3. Optical and Structural Properties of Copper−Oxytocin Dications in the Gas Phase
- Author
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Jérôme Lemoine, Renaud Ballivian, Florian Albrieux, Laure Joly, Michel Broyer, Roland Mitrić, Vlasta Bonačić-Koutecký, Rodolphe Antoine, Philippe Dugourd, Fabien Chirot, Claudio Greco, Joly, L, Antoine, R, Albrieux, F, Ballivian, R, Broyer, M, Chirot, F, Lemoine, J, Dugourd, P, Greco, C, Mitric, R, and Bonacic Koutecky, V
- Subjects
Molecular Structure ,Cations, Divalent ,Photodissociation ,Analytical chemistry ,chemistry.chemical_element ,Time-dependent density functional theory ,Crystallography, X-Ray ,Oxytocin ,Copper ,Surfaces, Coatings and Films ,Gas phase ,Ion ,Oxytocin, TDDFT ,chemistry ,Materials Chemistry ,Physical chemistry ,Gases ,Physical and Theoretical Chemistry - Abstract
We present a joint experimental and theoretical investigation of the structural and optical properties of copper-oxytocin dications in the gas phase. Ion mobility and UV photodissociation experiments were performed, allowing the investigation of the influence of the Cu2+ ion on the structural and optical properties of oxytocin. Density functional theory calculations were performed to find low energy structures for the bare and complexed peptide and to characterize optical spectral features. Copper complexation induces a drastic change in the structure of the oxytocin peptide. In particular, we predict a 4N chelation of the copper cation which leads to a contraction of the oxytocin ring. The gas phase lowest-energy structures are compared with the X-ray crystal structure of the oxytocin molecule bound to its receptor protein. The optical spectrum of oxytocin complexed with the copper cation displays a global enhancement of the photofragmentation yield as compared to the one recorded for the doubly protonated oxytocin. Moreover, experimental and calculated optical spectra of protonated tyrosine have also been determined, since its leading features are present in oxytocin as well. © 2009 American Chemical Society.
- Published
- 2009
- Full Text
- View/download PDF
4. Towards a new pseudo-quantitative approach to evaluate the ionization response of nitrogen compounds in complex matrices.
- Author
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Guillemant J, Lacoue-Nègre M, Berlioz-Barbier A, Albrieux F, de Oliveira LP, Joly JF, and Duponchel L
- Abstract
Ultra high-resolution mass spectrometry (FT-ICR MS) coupled to electrospray ionization (ESI) provides unprecedented molecular characterization of complex matrices such as petroleum products. However, ESI faces major ionization competition phenomena that prevent the absolute quantification of the compounds of interest. On the other hand, comprehensive two-dimensional gas chromatography (GC × GC) coupled to specific detectors (HRMS or NCD) is able to quantify the main families identified in these complex matrices. In this paper, this innovative dual approach has been used to evaluate the ionization response of nitrogen compounds in gas oils as a case study. To this extent, a large gas oil dataset has been analyzed by GC × GC/HRMS, GC × GC-NCD and ESI(+/-)-FT-ICR MS. Then, the concentrations obtained from GC × GC-NCD have been compared to those obtained from FT-ICR MS hence proving that strong ionization competitions are taking place and also depending on the origin of the sample. Finally, multilinear regressions (MLR) have been used to quantitatively predict nitrogen families from FT-ICR MS measurements as well as start rationalizing the ionization competition phenomena taking place between them in different types of gas oils.
- Published
- 2021
- Full Text
- View/download PDF
5. Site-selective formation of an iron(iv)-oxo species at the more electron-rich iron atom of heteroleptic μ-nitrido diiron phthalocyanines.
- Author
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İşci Ü, Faponle AS, Afanasiev P, Albrieux F, Briois V, Ahsen V, Dumoulin F, Sorokin AB, and de Visser SP
- Abstract
Iron(iv)-oxo species have been identified as the active intermediates in key enzymatic processes, and their catalytic properties are strongly affected by the equatorial and axial ligands bound to the metal, but details of these effects are still unresolved. In our aim to create better and more efficient oxidants of H-atom abstraction reactions, we have investigated a unique heteroleptic diiron phthalocyanine complex. We propose a novel intramolecular approach to determine the structural features that govern the catalytic activity of iron(iv)-oxo sites. Heteroleptic μ-nitrido diiron phthalocyanine complexes having an unsubstituted phthalocyanine (Pc 1 ) and a phthalocyanine ligand substituted with electron-withdrawing alkylsulfonyl groups (Pc SO
2 R ) were prepared and characterized. A reaction with terminal oxidants gives two isomeric iron(iv)-oxo and iron(iii)-hydroperoxo species with abundances dependent on the equatorial ligand. Cryospray ionization mass spectrometry (CSI-MS) characterized both hydroperoxo and diiron oxo species in the presence of H2 O2 . When m -CPBA was used as the oxidant, the formation of diiron oxo species (Pc SO2 R )FeNFe(Pc 1 )[double bond, length as m-dash]O was also evidenced. Sufficient amounts of these transient species were trapped in the quadrupole region of the mass-spectrometer and underwent a CID-MS/MS fragmentation. Analyses of fragmentation patterns indicated a preferential formation of hydroperoxo and oxo moieties at more electron-rich iron sites of both heteroleptic μ-nitrido complexes. DFT calculations show that both isomers are close in energy. However, the analysis of the iron(iii)-hydroperoxo bond strength reveals major differences for the (Pc 1 )FeN(Pc SO2 R )FeIII OOH system as compared to (Pc SO2 R )FeN(Pc 1 )FeIII OOH system, and, hence binding of a terminal oxidant will be preferentially on more electron-rich sides. Subsequent kinetics studies showed that these oxidants are able to even oxidize methane to formic acid efficiently., (This journal is © The Royal Society of Chemistry 2015.)- Published
- 2015
- Full Text
- View/download PDF
6. Synthesis, characterization and optical properties of an amino-functionalized gold thiolate cluster: Au10(SPh-pNH2)10.
- Author
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Lavenn C, Albrieux F, Tuel A, and Demessence A
- Abstract
Research interest in ultra small gold thiolate clusters has been rising in recent years for the challenges they offer to bring together properties of nanoscience and well-defined materials from molecular chemistry. Here, a new atomically well-defined Au10 gold nanocluster surrounded by ten 4-aminothiophenolate ligands is reported. Its synthesis followed the similar conditions reported for the elaboration of Au144(SR)60, but because the reactivity of thiophenol ligands is different from alkanethiol derivates, smaller Au10 clusters were formed. Different techniques, such as ESI-MS, elemental analysis, XRD, TGA, XPS and UV-vis-NIR experiments, have been carried out to determine the Au10(SPh-pNH2)10 formula. Photoemission experiment has been done and reveals that the Au10 clusters are weakly luminescent as opposed to the amino-based ultra-small gold clusters. This observation points out that the emission of gold thiolate clusters is highly dependent on both the structure of the gold core and the type of the ligands at the surface. In addition, ultra-small amino-functionalized clusters offer the opportunity for extended work on self-assembling networks or deposition on substrates for nanotechnologies or catalytic applications., (Copyright © 2013 Elsevier Inc. All rights reserved.)
- Published
- 2014
- Full Text
- View/download PDF
7. Structural preferences of gas-phase M2TMP monomers upon sequence variations.
- Author
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Albrieux F, Ben Hamidane H, Calvo F, Chirot F, Tsybin YO, Antoine R, Lemoine J, and Dugourd P
- Subjects
- Circular Dichroism, Gases chemistry, Models, Molecular, Molecular Dynamics Simulation, Peptides chemical synthesis, Protein Conformation, Tandem Mass Spectrometry, Peptides chemistry
- Abstract
The conformations of a number of M2TMP(22-46) sequence variants have been investigated using ion mobility spectrometry (IMS). Substantial conformational changes were evidenced by IMS upon the variation of a single amino acid in the peptide sequence, with two main drift time signatures. Replica-exchange molecular dynamics simulations were used to help assign the structures of the different identified conformers. Even though one-on-one agreement with experiment was found for only two variants, the simulations generally confirmed the existence of two structural families. Based on these results, most of the triply protonated variants, including the wild-type peptide, were found to display collision cross sections in agreement with compact conformations in the gas phase, whereas they tend to form extended α-helices in the condensed phase, as confirmed by circular dichroism and previously reported NMR measurements. The destabilization of α-helices in vacuo upon amino acid substitution is interpreted as being driven by the solvation pattern of the charges.
- Published
- 2011
- Full Text
- View/download PDF
8. Conformation of polyalanine and polyglycine dications in the gas phase: insight from ion mobility spectrometry and replica-exchange molecular dynamics.
- Author
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Albrieux F, Calvo F, Chirot F, Vorobyev A, Tsybin YO, Lepère V, Antoine R, Lemoine J, and Dugourd P
- Subjects
- Diffusion, Protein Conformation, Spectrum Analysis, Temperature, Gases chemistry, Molecular Dynamics Simulation, Peptides chemistry
- Abstract
The conformation of model [Arg(Ala)(4)X(Ala)(4)Lys+2H](2+) and [Arg(Gly)(4)X(Gly)(4)Lys+2H](2+) peptides has been systematically investigated as a function of the central amino acid X through a combined experimental and theoretical approach. Mass spectrometry-based ion mobility measurements have been performed together with conformational sampling using replica-exchange molecular dynamics to probe the influence of each amino acid on the stable peptide conformation. Satisfactory agreement is obtained between measured and calculated diffusion cross section distributions. The results confirm the propensity of alanine-based peptides to form alpha-helices in the gas phase, differences between peptides arising from the local arrangement of the central side chain with respect to the charged ends. More generally, we find that charge solvation plays a major role in secondary structure stabilization, especially in the case of glycine-based peptides. The rich variety of conformations exhibited by the latter is qualitatively captured by the simulations. This work illustrates the potentiality of such combined experimental/theoretical strategy to determine peptide secondary structures. The present polyalanine and polyglycine peptides also offer a series of benchmark systems for future conformation-resolved studies.
- Published
- 2010
- Full Text
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