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In-season crop production forecasts at the regional or sub-regional scale are essential to aid in food security through early warning of harvest shortfall/surplus, tailoring crop management decisions and addressing climatic shock. Considering the efforts to establish a framework towards quantifying the crop yield prediction at regional scales are limited, we investigated the utility of combining crop model with the regional weather prediction model to forecast winter wheat yields over space. The exercise was performed for various lead-times in the regions of Punjab and Haryana for the years 2008–2009. A numerical weather prediction (NWP) model was used to generate micro-meteorological variables at different lead times (1-week, 2-weeks, 3-weeks and 5-weeks) ahead of crop harvest and used within the CERES-Wheat crop simulation model gridded framework at a spatial resolution of 10 km. Various scenarios of the yield forecasts were verified with district-wide reported yield values. Average deviations of −12 to 3% from the actual district-wise wheat yields were observed across the lead times. The 3-weeks-ahead yield forecasts yielded a maximum agreement index of 0.86 with a root mean squared error (RMSE) of 327.75 kg/ha and a relative deviation of −5.35%. The critical crop growth stages were found to be highly sensitive to the errors in the weather forecast, and thus made a huge impact on the predicted crop yields. The 5-weeks-ahead weather forecasts generated anomalous meteorological data during flowering and grain-filling crop growth stages, and thus had the highest negative impact on the simulated yields. The agreement index of the 5-week-ahead forecasts was 0.41 with an RMSE of 415.15 kg ha−1 and relative deviation of −2.77 ± 5.01. The proposed methodology showed significant forecast skill for extended space and time scale crop yield forecasting, offering scope for further research and practical applicability. [ABSTRACT FROM AUTHOR]