1. Toward Understanding the Structural Basis of Partial Agonism at the Dopamine D3 Receptor
- Author
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Clare Zhu, Prashant Donthamsetti, Ravi Kumar Verma, Thomas M. Keck, Oluyomi M. Bakare, Hideaki Yano, Amy Hauck Newman, Jeffrey R. Deschamps, Lei Shi, Comfort A. Boateng, Michael P. Ellenberger, Vivek Kumar, Mayako Michino, Alessandro Bonifazi, and Jonathan A. Javitch
- Subjects
0301 basic medicine ,Chemistry ,Dopaminergic ,Pharmacology ,Partial agonist ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Dopamine receptor D3 ,Drug Discovery ,Molecular Medicine ,Agonism ,Substance use ,Enantiomer ,Receptor ,Physiological agonism and antagonism ,030217 neurology & neurosurgery - Abstract
Both dopamine D3 receptor (D3R) partial agonists and antagonists have been implicated as potential medications for substance use disorders. In contrast to antagonists, partial agonists may cause fewer side effects since they maintain some dopaminergic tone and may be less disruptive to normal neuronal functions. Here, we report three sets of 4-phenylpiperazine stereoisomers that differ considerably in efficacy: the (R)-enantiomers are antagonists/weak partial agonists, whereas the (S)-enantiomers are much more efficacious. To investigate the structural basis of partial agonism, we performed comparative microsecond-scale molecular dynamics simulations starting from the inactive state of D3R in complex with these enantiomers. Analysis of the simulation results reveals common structural rearrangements near the ligand binding site induced by the bound (S)-enantiomers, but not by the (R)-enantiomers, that are features of partially activated receptor conformations. These receptor models bound with partial agoni...
- Published
- 2017
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