35 results on '"Naselli, G"'
Search Results
2. GM3 ganglioside and phosphatidylethanolamine-containing lipids are adipose tissue markers of insulin resistance in obese women
- Author
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Wentworth, J M, Naselli, G, Ngui, K, Smyth, G K, Liu, R, O'Brien, P E, Bruce, C, Weir, J, Cinel, M, Meikle, P J, and Harrison, L C
- Published
- 2016
- Full Text
- View/download PDF
3. Women with type 1 diabetes exhibit a progressive increase in gut Saccharomyces cerevisiae in pregnancy associated with evidence of gut inflammation
- Author
-
Bandala-Sanchez, E, Roth-Schulze, AJ, Oakey, H, Penno, MAS, Bediaga, NG, Naselli, G, Ngui, KM, Smith, AD, Huang, D, Zozaya-Valdes, E, Thomson, RL, Brown, JD, Vuillermin, Peter, Barry, SC, Craig, ME, Rawlinson, WD, Davis, EA, Harris, M, Soldatos, G, Colman, PG, Wentworth, JM, Haynes, A, Morahan, G, Sinnott, RO, Papenfuss, AT, Couper, JJ, Harrison, LC, Bandala-Sanchez, E, Roth-Schulze, AJ, Oakey, H, Penno, MAS, Bediaga, NG, Naselli, G, Ngui, KM, Smith, AD, Huang, D, Zozaya-Valdes, E, Thomson, RL, Brown, JD, Vuillermin, Peter, Barry, SC, Craig, ME, Rawlinson, WD, Davis, EA, Harris, M, Soldatos, G, Colman, PG, Wentworth, JM, Haynes, A, Morahan, G, Sinnott, RO, Papenfuss, AT, Couper, JJ, and Harrison, LC
- Published
- 2022
4. Multi-level remodelling of chromatin underlying activation of human T cells
- Author
-
Bediaga, NG, Coughlan, HD, Johanson, TM, Garnham, AL, Naselli, G, Schroeder, J, Fearnley, LG, Bandala-Sanchez, E, Allan, RS, Smyth, GK, Harrison, LC, Bediaga, NG, Coughlan, HD, Johanson, TM, Garnham, AL, Naselli, G, Schroeder, J, Fearnley, LG, Bandala-Sanchez, E, Allan, RS, Smyth, GK, and Harrison, LC
- Abstract
Remodelling of chromatin architecture is known to regulate gene expression and has been well characterized in cell lineage development but less so in response to cell perturbation. Activation of T cells, which triggers extensive changes in transcriptional programs, serves as an instructive model to elucidate how changes in chromatin architecture orchestrate gene expression in response to cell perturbation. To characterize coordinate changes at different levels of chromatin architecture, we analyzed chromatin accessibility, chromosome conformation and gene expression in activated human T cells. T cell activation was characterized by widespread changes in chromatin accessibility and interactions that were shared between activated CD4+ and CD8+ T cells, and with the formation of active regulatory regions associated with transcription factors relevant to T cell biology. Chromatin interactions that increased and decreased were coupled, respectively, with up- and down-regulation of corresponding target genes. Furthermore, activation was associated with disruption of long-range chromatin interactions and with partitioning of topologically associating domains (TADs) and remodelling of their TAD boundaries. Newly formed/strengthened TAD boundaries were associated with higher nucleosome occupancy and lower accessibility, linking changes in lower and higher order chromatin architecture. T cell activation exemplifies coordinate multi-level remodelling of chromatin underlying gene transcription.
- Published
- 2021
5. Chromosomes distribute randomly to, but not within, human neutrophil nuclear lobes
- Author
-
Keenan, CR, Mlodzianoski, MJ, Coughlan, HD, Bediaga, NG, Naselli, G, Lucas, EC, Wang, Q, de Graaf, CA, Hilton, DJ, Harrison, LC, Smyth, GK, Rogers, KL, Boudier, T, Allan, RS, Johanson, TM, Keenan, CR, Mlodzianoski, MJ, Coughlan, HD, Bediaga, NG, Naselli, G, Lucas, EC, Wang, Q, de Graaf, CA, Hilton, DJ, Harrison, LC, Smyth, GK, Rogers, KL, Boudier, T, Allan, RS, and Johanson, TM
- Abstract
The proximity pattern and radial distribution of chromosome territories within spherical nuclei are random and non-random, respectively. Whether this distribution pattern is conserved in the partitioned or lobed nuclei of polymorphonuclear cells is unclear. Here we use chromosome paint technology to examine the chromosome territories of all 46 chromosomes in hundreds of single human neutrophils - an abundant and famously polymorphonuclear immune cell. By comparing the distribution of chromosomes to randomly shuffled controls and validating with orthogonal chromosome conformation capture technology, we show for the first time that human chromosomes randomly distribute to neutrophil nuclear lobes, while maintaining a non-random radial distribution within these lobes. Furthermore, we demonstrate that chromosome length correlates with three-dimensional volume not only in neutrophils but other human immune cells. This work demonstrates that chromosomes are largely passive passengers during the neutrophil lobing process but are able to subsequently maintain their macro-level organization within lobes.
- Published
- 2021
6. The A-chain of insulin is a hot-spot for CD4+ T cell epitopes in human type 1 diabetes
- Author
-
Mannering, S. I., Pang, S. H., Williamson, N. A., Naselli, G., Reynolds, E. C., OʼBrien-Simpson, N. M., Purcell, A. W., and Harrison, L. C.
- Published
- 2009
- Full Text
- View/download PDF
7. Genome-wide analysis reveals no evidence of trans chromosomal regulation of mammalian immune development
- Author
-
Barsh, GS, Johanson, TM, Coughlan, HD, Lun, ATL, Bediaga, NG, Naselli, G, Garnham, AL, Harrison, LC, Smyth, GK, Allan, RS, Barsh, GS, Johanson, TM, Coughlan, HD, Lun, ATL, Bediaga, NG, Naselli, G, Garnham, AL, Harrison, LC, Smyth, GK, and Allan, RS
- Abstract
It has been proposed that interactions between mammalian chromosomes, or transchromosomal interactions (also known as kissing chromosomes), regulate gene expression and cell fate determination. Here we aimed to identify novel transchromosomal interactions in immune cells by high-resolution genome-wide chromosome conformation capture. Although we readily identified stable interactions in cis, and also between centromeres and telomeres on different chromosomes, surprisingly we identified no gene regulatory transchromosomal interactions in either mouse or human cells, including previously described interactions. We suggest that advances in the chromosome conformation capture technique and the unbiased nature of this approach allow more reliable capture of interactions between chromosomes than previous methods. Overall our findings suggest that stable transchromosomal interactions that regulate gene expression are not present in mammalian immune cells and that lineage identity is governed by cis, not trans chromosomal interactions.
- Published
- 2018
8. Elastodynamics Analysis of Icaro: a PKM for Pure Translational Motion
- Author
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Alessandro Cammarata, Naselli, G. A., and Sinatra, R.
- Published
- 2013
9. ELASTODYNAMICS MODEL AND MODAL TESTING OF A 3CPU PARALLEL KINEMATIC MACHINE WITH REDUCED MOBILITY
- Author
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Cammarata, Alessandro, Martarelli, M, Naselli, G. A., Palmieri, G, Palpacelli, M, Sinatra, Rosario, and Tomasini, E. P.
- Subjects
ELASTODYNAMICS ,3CPU PARALLEL KINEMATIC - Published
- 2012
10. GM3 ganglioside and phosphatidylethanolamine-containing lipids are adipose tissue markers of insulin resistance in obese women
- Author
-
Wentworth, J M, primary, Naselli, G, additional, Ngui, K, additional, Smyth, G K, additional, Liu, R, additional, O'Brien, P E, additional, Bruce, C, additional, Weir, J, additional, Cinel, M, additional, Meikle, P J, additional, and Harrison, L C, additional
- Published
- 2015
- Full Text
- View/download PDF
11. Pro-Inflammatory CD11c+CD206+ Adipose Tissue Macrophages Are Associated With Insulin Resistance in Human Obesity
- Author
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Wentworth, JM, Naselli, G, Brovvn, WA, Doyle, L, Phipson, B, Smyth, GK, Wabitsch, M, O'Brien, PE, Harrison, LC, Wentworth, JM, Naselli, G, Brovvn, WA, Doyle, L, Phipson, B, Smyth, GK, Wabitsch, M, O'Brien, PE, and Harrison, LC
- Abstract
OBJECTIVE: Insulin resistance and other features of the metabolic syndrome have been causally linked to adipose tissue macrophages (ATMs) in mice with diet-induced obesity. We aimed to characterize macrophage phenotype and function in human subcutaneous and omental adipose tissue in relation to insulin resistance in obesity. RESEARCH DESIGN AND METHODS: Adipose tissue was obtained from lean and obese women undergoing bariatric surgery. Metabolic markers were measured in fasting serum and ATMs characterized by immunohistology, flow cytometry, and tissue culture studies. RESULTS ATMs comprised CD11c(+)CD206(+) cells in "crown" aggregates and solitary CD11c(-)CD206(+) cells at adipocyte junctions. In obese women, CD11c(+) ATM density was greater in subcutaneous than omental adipose tissue and correlated with markers of insulin resistance. CD11c(+) ATMs were distinguished by high expression of integrins and antigen presentation molecules; interleukin (IL)-1beta, -6, -8, and -10; tumor necrosis factor-alpha; and CC chemokine ligand-3, indicative of an activated, proinflammatory state. In addition, CD11c(+) ATMs were enriched for mitochondria and for RNA transcripts encoding mitochondrial, proteasomal, and lysosomal proteins, fatty acid metabolism enzymes, and T-cell chemoattractants, whereas CD11c(-) ATMs were enriched for transcripts involved in tissue maintenance and repair. Tissue culture medium conditioned by CD11c(+) ATMs, but not CD11c(-) ATMs or other stromovascular cells, impaired insulin-stimulated glucose uptake by human adipocytes. CONCLUSIONS: These findings identify proinflammatory CD11c(+) ATMs as markers of insulin resistance in human obesity. In addition, the machinery of CD11c(+) ATMs indicates they metabolize lipid and may initiate adaptive immune responses.
- Published
- 2010
12. Lack of expression of Gp-130 makes pancreatic beta cell lines unresponsive to the IL-6 family of cytokines.
- Author
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Naselli, G, Deaizpurua, HJ, Thomas, HE, Johnston, AM, Kay, TW, Naselli, G, Deaizpurua, HJ, Thomas, HE, Johnston, AM, and Kay, TW
- Abstract
Cytokine receptors from the IL-6 receptor family are comprised of ligand specific alpha chains and a common signalling chain, gp-130, which is also required for high affinity binding. A cDNA library generated from the beta-TC3 SV40 T-antigen transformed insulinoma cell line was screened for members of this receptor family potentially relevant to both beta cell development and autoimmunity. Degenerate oligonucleotide primers to a consensus region of these receptors were used and the IL-11 receptor alpha chain was identified. Despite confirmation of IL-11 receptor mRNA expression, iodinated bioactive IL-11 did not bind specifically to beta-TC3 cells and gp-130-dependent cytokines did not elicit signalling events in beta cell lines. This was explained by absence of gp-130 protein or mRNA in the beta cell lines tested and in primary islets. We conclude from these results that the previously recognised effects of IL-6 family member cytokines on pancreatic islets must be indirect via other non-beta cells within the islet, rather than due to direct effects on beta cells themselves.
- Published
- 2001
13. GM3ganglioside and phosphatidylethanolamine-containing lipids are adipose tissue markers of insulin resistance in obese women
- Author
-
Wentworth, J M, Naselli, G, Ngui, K, Smyth, G K, Liu, R, O'Brien, P E, Bruce, C, Weir, J, Cinel, M, Meikle, P J, and Harrison, L C
- Abstract
Aims:: The association between central obesity and insulin resistance reflects the properties of visceral adipose tissue. Our aim was to gain further insight into this association by analysing the lipid composition of subcutaneous and omental adipose tissue in obese women with and without insulin resistance. Methods:: Subcutaneous and omental adipose tissue and serum were obtained from 29 obese non-diabetic women, 13 of whom were hyperinsulinemic. Histology, lipid and gene profiling were performed. Results:: In omental adipose tissue of obese, insulin-resistant women, adipocyte hypertrophy and macrophage infiltration were accompanied by an increase in G
M3 ganglioside and its synthesis enzyme ST3GAL5; in addition, phosphatidylethanolamine (PE) lipids were increased and their degradation enzyme, phosphatidylethanolamine methyl transferase (PEMT), decreased. ST3GAL5was expressed predominantly in adipose stromovascular cells and PEMTin adipocytes. Insulin resistance was also associated with an increase in PE lipids in serum. Interpretation:: The relevance of these findings to insulin resistance in humans is supported by published mouse studies, in which adipocyte GM3 ganglioside, increased by the inflammatory cytokine tumour necrosis factor-a, impaired insulin action and PEMT was required for adipocyte lipid storage. Thus in visceral adipose tissue of obese humans, an increase in GM3 ganglioside secondary to inflammation may contribute to insulin resistance and a decrease in PEMT may be a compensatory response to adipocyte hypertrophy.- Published
- 2016
- Full Text
- View/download PDF
14. Pro-inflammatory CD11c+CD206+ adipose tissue macrophages are associated with insulin resistance in human obesity.
- Author
-
Wentworth JM, Naselli G, Brown WA, Doyle L, Phipson B, Smyth GK, Wabitsch M, O'Brien PE, Harrison LC, Wentworth, John M, Naselli, Gaetano, Brown, Wendy A, Doyle, Lisa, Phipson, Belinda, Smyth, Gordon K, Wabitsch, Martin, O'Brien, Paul E, and Harrison, Leonard C
- Abstract
Objective: Insulin resistance and other features of the metabolic syndrome have been causally linked to adipose tissue macrophages (ATMs) in mice with diet-induced obesity. We aimed to characterize macrophage phenotype and function in human subcutaneous and omental adipose tissue in relation to insulin resistance in obesity.Research Design and Methods: Adipose tissue was obtained from lean and obese women undergoing bariatric surgery. Metabolic markers were measured in fasting serum and ATMs characterized by immunohistology, flow cytometry, and tissue culture studies. RESULTS ATMs comprised CD11c(+)CD206(+) cells in "crown" aggregates and solitary CD11c(-)CD206(+) cells at adipocyte junctions. In obese women, CD11c(+) ATM density was greater in subcutaneous than omental adipose tissue and correlated with markers of insulin resistance. CD11c(+) ATMs were distinguished by high expression of integrins and antigen presentation molecules; interleukin (IL)-1beta, -6, -8, and -10; tumor necrosis factor-alpha; and CC chemokine ligand-3, indicative of an activated, proinflammatory state. In addition, CD11c(+) ATMs were enriched for mitochondria and for RNA transcripts encoding mitochondrial, proteasomal, and lysosomal proteins, fatty acid metabolism enzymes, and T-cell chemoattractants, whereas CD11c(-) ATMs were enriched for transcripts involved in tissue maintenance and repair. Tissue culture medium conditioned by CD11c(+) ATMs, but not CD11c(-) ATMs or other stromovascular cells, impaired insulin-stimulated glucose uptake by human adipocytes.Conclusions: These findings identify proinflammatory CD11c(+) ATMs as markers of insulin resistance in human obesity. In addition, the machinery of CD11c(+) ATMs indicates they metabolize lipid and may initiate adaptive immune responses. [ABSTRACT FROM AUTHOR]- Published
- 2010
- Full Text
- View/download PDF
15. The A-chain of insulin is a hot-spot for CD4+ T cell epitopes in human type 1 diabetes.
- Author
-
Mannering, S. I., Pang, S. H., Williamson, N. A., Naselli, G., Reynolds, E. C., O'Brien-Simpson, N. M., Purcell, A. W., and Harrison, L. C.
- Subjects
EPITOPES ,DIABETES ,PANCREATIC beta cells ,MECHANISM of action for insulin ,T cells ,CELL death ,PROINSULIN - Abstract
Type 1 diabetes (T1D) is caused by T cell-mediated destruction of the pancreatic insulin-producing β cells. While the role of CD4
+ T cells in the pathogenesis of T1D is accepted widely, the epitopes recognized by pathogenic human CD4+ T cells remain poorly defined. None the less, responses to the N-terminal region of the insulin A-chain have been described. Human CD4+ T cells from the pancreatic lymph nodes of subjects with T1D respond to the first 15 amino acids of the insulin A-chain. We identified a human leucocyte antigen-DR4-restricted epitope comprising the first 13 amino acids of the insulin A-chain (A1-13), dependent upon generation of a vicinal disulphide bond between adjacent cysteines (A6–A7). Here we describe the analysis of a CD4+ T cell clone, isolated from a subject with T1D, which recognizes a new HLR-DR4-restricted epitope (KRGIVEQCCTSICS) that overlaps the insulin A1-13 epitope. This is a novel epitope, because the clone responds to proinsulin but not to insulin, T cell recognition requires the last two residues of the C-peptide (Lys, Arg) and recognition does not depend upon a vicinal disulphide bond between the A6 and A7 cysteines. The finding of a further CD4+ T cell epitope in the N-terminal A-chain region of human insulin underscores the importance of this region as a target of CD4+ T cell responses in human T1D. [ABSTRACT FROM AUTHOR]- Published
- 2009
- Full Text
- View/download PDF
16. Expression of mixed lineage kinase-1 in pancreatic beta-cell lines at different stages of maturation and during embryonic pancreas development.
- Author
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DeAizpurua, H J, Cram, D S, Naselli, G, Devereux, L, and Dorow, D S
- Abstract
Events controlling differentiation to insulin-secreting beta-cells in the pancreas are not well understood, although beta-cells are thought to arise from pluripotent ductal precursor cells. To search for signaling proteins that might be involved in beta-cell maturation, we analyzed protein kinase expression in two developmentally and functionally distinct pancreatic beta-cell lines, RIN-5AH and RIN-A12, by reverse transcriptase polymerase chain reaction. A number of tyrosine and serine/threonine kinases were identified in both lines. One protein kinase, mixed lineage kinase-1 (MLK-1), was expressed at both the RNA and protein levels in RIN-5AH cells, which display an immature beta-cell phenotype, but was not detected in the more mature RIN-A12 cells. Furthermore, levels of MLK-1 mRNA and protein were increased after brief stimulation of RIN-5AH cells with either the differentiation inducer, sodium butyrate, or with serum after serum starvation. These increases in expression were independent of phenotypic markers such as insulin secretion or surface expression of major histocompatibility class I- and A2B5-reactive ganglioside. In addition, increases in MLK-1 expression in the stimulated RIN-5AH cells were accompanied by phosphorylation of MLK-1 on serine but not tyrosine. Antisense oligonucleotides to two distinct regions of MLK-1 caused RIN-5AH cells, but not RIN-A12 cells, to adopt a highly undifferentiated morphology, with a reduction in DNA synthesis and MLK-1 protein levels and elevated glucagon mRNA levels, but with no effect on insulin mRNA. In an immunohistochemical survey of embryonic mouse tissues, we found that temporal expression of MLK-1 was regulated in a tissue-specific manner. In the embryonic pancreas, MLK-1 expression was evident in ductal cells from day 13 to 16 but was not detected in late stage gestation or neonatal pancreas. These data suggest that MLK-1 is regulated in immature pancreatic beta-cells and their ductal precursors at the level of functional maturity and may therefore play a role in beta-cell development.
- Published
- 1997
17. Human HLA-DR+CD27+ regulatory T cells show enhanced antigen-specific suppressive function.
- Author
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Ma X, Cao L, Raneri M, Wang H, Cao Q, Zhao Y, Bediaga NG, Naselli G, Harrison LC, Hawthorne WJ, Hu M, Yi S, and O'Connell PJ
- Subjects
- Mice, Humans, Animals, Swine, Mice, SCID, Mice, Inbred NOD, Forkhead Transcription Factors genetics, Forkhead Transcription Factors metabolism, T-Lymphocytes, Regulatory, HLA-DR Antigens metabolism
- Abstract
Regulatory T cells (Tregs) have potential for the treatment of autoimmune diseases and graft rejection. Antigen specificity and functional stability are considered critical for their therapeutic efficacy. In this study, expansion of human Tregs in the presence of porcine PBMCs (xenoantigen-expanded Tregs, Xn-Treg) allowed the selection of a distinct Treg subset, coexpressing the activation/memory surface markers HLA-DR and CD27 with enhanced proportion of FOXP3+Helios+ Tregs. Compared with their unsorted and HLA-DR+CD27+ double-positive (DP) cell-depleted Xn-Treg counterparts, HLA-DR+CD27+ DP-enriched Xn-Tregs expressed upregulated Treg function markers CD95 and ICOS with enhanced suppression of xenogeneic but not polyclonal mixed lymphocyte reaction. They also had less Treg-specific demethylation in the region of FOXP3 and were more resistant to conversion to effector cells under inflammatory conditions. Adoptive transfer of porcine islet recipient NOD/SCID IL2 receptor γ-/- mice with HLA-DR+CD27+ DP-enriched Xn-Tregs in a humanized mouse model inhibited porcine islet graft rejection mediated by 25-fold more human effector cells. The prolonged graft survival was associated with enhanced accumulation of FOXP3+ Tregs and upregulated expression of Treg functional genes, IL10 and cytotoxic T lymphocyte antigen 4, but downregulated expression of effector Th1, Th2, and Th17 cytokine genes, within surviving grafts. Collectively, human HLA-DR+CD27+ DP-enriched Xn-Tregs expressed a specific regulatory signature that enabled identification and isolation of antigen-specific and functionally stable Tregs with potential as a Treg-based therapy.
- Published
- 2023
- Full Text
- View/download PDF
18. Cytotoxicity-Related Gene Expression and Chromatin Accessibility Define a Subset of CD4+ T Cells That Mark Progression to Type 1 Diabetes.
- Author
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Bediaga NG, Garnham AL, Naselli G, Bandala-Sanchez E, Stone NL, Cobb J, Harbison JE, Wentworth JM, Ziegler AG, Couper JJ, Smyth GK, and Harrison LC
- Subjects
- Adolescent, Autoimmunity genetics, B-Lymphocytes metabolism, CD4-Positive T-Lymphocytes immunology, CD4-Positive T-Lymphocytes ultrastructure, CD8-Positive T-Lymphocytes metabolism, Child, Child, Preschool, Diabetes Mellitus, Type 1 genetics, Genetic Predisposition to Disease, Humans, Islets of Langerhans immunology, Killer Cells, Natural metabolism, Sequence Analysis, RNA, CD4-Positive T-Lymphocytes metabolism, Chromatin chemistry, Cytotoxicity, Immunologic genetics, Diabetes Mellitus, Type 1 immunology, Disease Progression, Gene Expression Regulation
- Abstract
Type 1 diabetes in children is heralded by a preclinical phase defined by circulating autoantibodies to pancreatic islet antigens. How islet autoimmunity is initiated and then progresses to clinical diabetes remains poorly understood. Only one study has reported gene expression in specific immune cells of children at risk associated with progression to islet autoimmunity. We analyzed gene expression with RNA sequencing in CD4+ and CD8+ T cells, natural killer (NK) cells, and B cells, and chromatin accessibility by assay for transposase-accessible chromatin sequencing (ATAC-seq) in CD4+ T cells, in five genetically at risk children with islet autoantibodies who progressed to diabetes over a median of 3 years ("progressors") compared with five children matched for sex, age, and HLA-DR who had not progressed ("nonprogressors"). In progressors, differentially expressed genes (DEGs) were largely confined to CD4+ T cells and enriched for cytotoxicity-related genes/pathways. Several top-ranked DEGs were validated in a semi-independent cohort of 13 progressors and 11 nonprogressors. Flow cytometry confirmed that progression was associated with expansion of CD4+ cells with a cytotoxic phenotype. By ATAC-seq, progression was associated with reconfiguration of regulatory chromatin regions in CD4+ cells, some linked to differentially expressed cytotoxicity-related genes. Our findings suggest that cytotoxic CD4+ T cells play a role in promoting progression to type 1 diabetes., (© 2022 by the American Diabetes Association.)
- Published
- 2022
- Full Text
- View/download PDF
19. Chromosomes distribute randomly to, but not within, human neutrophil nuclear lobes.
- Author
-
Keenan CR, Mlodzianoski MJ, Coughlan HD, Bediaga NG, Naselli G, Lucas EC, Wang Q, de Graaf CA, Hilton DJ, Harrison LC, Smyth GK, Rogers KL, Boudier T, Allan RS, and Johanson TM
- Abstract
The proximity pattern and radial distribution of chromosome territories within spherical nuclei are random and non-random, respectively. Whether this distribution pattern is conserved in the partitioned or lobed nuclei of polymorphonuclear cells is unclear. Here we use chromosome paint technology to examine the chromosome territories of all 46 chromosomes in hundreds of single human neutrophils - an abundant and famously polymorphonuclear immune cell. By comparing the distribution of chromosomes to randomly shuffled controls and validating with orthogonal chromosome conformation capture technology, we show for the first time that human chromosomes randomly distribute to neutrophil nuclear lobes, while maintaining a non-random radial distribution within these lobes. Furthermore, we demonstrate that chromosome length correlates with three-dimensional volume not only in neutrophils but other human immune cells. This work demonstrates that chromosomes are largely passive passengers during the neutrophil lobing process but are able to subsequently maintain their macro-level organization within lobes., Competing Interests: The authors declare no competing interests., (© 2021 The Author(s).)
- Published
- 2021
- Full Text
- View/download PDF
20. Multi-level remodelling of chromatin underlying activation of human T cells.
- Author
-
Bediaga NG, Coughlan HD, Johanson TM, Garnham AL, Naselli G, Schröder J, Fearnley LG, Bandala-Sanchez E, Allan RS, Smyth GK, and Harrison LC
- Subjects
- CD4-Positive T-Lymphocytes, CD8-Positive T-Lymphocytes, Cells, Cultured, Humans, Male, Nucleosomes genetics, Transcription Factors, Transcription, Genetic genetics, Chromatin chemistry, Chromatin genetics, Chromatin Assembly and Disassembly genetics, Chromatin Assembly and Disassembly physiology, Gene Expression Regulation, Developmental genetics, Lymphocyte Activation genetics, T-Lymphocytes immunology
- Abstract
Remodelling of chromatin architecture is known to regulate gene expression and has been well characterized in cell lineage development but less so in response to cell perturbation. Activation of T cells, which triggers extensive changes in transcriptional programs, serves as an instructive model to elucidate how changes in chromatin architecture orchestrate gene expression in response to cell perturbation. To characterize coordinate changes at different levels of chromatin architecture, we analyzed chromatin accessibility, chromosome conformation and gene expression in activated human T cells. T cell activation was characterized by widespread changes in chromatin accessibility and interactions that were shared between activated CD4
+ and CD8+ T cells, and with the formation of active regulatory regions associated with transcription factors relevant to T cell biology. Chromatin interactions that increased and decreased were coupled, respectively, with up- and down-regulation of corresponding target genes. Furthermore, activation was associated with disruption of long-range chromatin interactions and with partitioning of topologically associating domains (TADs) and remodelling of their TAD boundaries. Newly formed/strengthened TAD boundaries were associated with higher nucleosome occupancy and lower accessibility, linking changes in lower and higher order chromatin architecture. T cell activation exemplifies coordinate multi-level remodelling of chromatin underlying gene transcription.- Published
- 2021
- Full Text
- View/download PDF
21. Extreme disruption of heterochromatin is required for accelerated hematopoietic aging.
- Author
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Keenan CR, Iannarella N, Naselli G, Bediaga NG, Johanson TM, Harrison LC, and Allan RS
- Subjects
- Aged, Aging, Premature metabolism, Animals, Cell Nucleus genetics, Female, Hematopoietic Stem Cells metabolism, Heterochromatin genetics, Humans, Male, Mice, Mice, Knockout, T-Lymphocytes immunology, T-Lymphocytes metabolism, T-Lymphocytes pathology, Aging, Premature pathology, Cell Differentiation, Hematopoiesis, Hematopoietic Stem Cells pathology, Heterochromatin metabolism, Histone-Lysine N-Methyltransferase physiology, Methyltransferases physiology, Repressor Proteins physiology
- Abstract
Loss of heterochromatin has been proposed as a universal mechanism of aging across different species and cell types. However, a comprehensive analysis of hematopoietic changes caused by heterochromatin loss is lacking. Moreover, there is conflict in the literature around the role of the major heterochromatic histone methyltransferase Suv39h1 in the aging process. Here, we use individual and dual deletion of Suv39h1 and Suv39h2 enzymes to examine the causal role of heterochromatin loss in hematopoietic cell development. Loss of neither Suv39h1 nor Suv39h2 individually had any effect on hematopoietic stem cell function or the development of mature lymphoid or myeloid lineages. However, deletion of both enzymes resulted in characteristic changes associated with aging such as reduced hematopoietic stem cell function, thymic involution and decreased lymphoid output with a skewing toward myeloid development, and increased memory T cells at the expense of naive T cells. These cellular changes were accompanied by molecular changes consistent with aging, including alterations in nuclear shape and increased nucleolar size. Together, our results indicate that the hematopoietic system has a remarkable tolerance for major disruptions in chromatin structure and reveal a role for Suv39h2 in depositing sufficient H3K9me3 to protect the entire hematopoietic system from changes associated with premature aging., (© 2020 by The American Society of Hematology.)
- Published
- 2020
- Full Text
- View/download PDF
22. CD52 glycan binds the proinflammatory B box of HMGB1 to engage the Siglec-10 receptor and suppress human T cell function.
- Author
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Bandala-Sanchez E, G Bediaga N, Goddard-Borger ED, Ngui K, Naselli G, Stone NL, Neale AM, Pearce LA, Wardak A, Czabotar P, Haselhorst T, Maggioni A, Hartley-Tassell LA, Adams TE, and Harrison LC
- Subjects
- Amino Acid Motifs, Antibodies pharmacology, Female, HMGB1 Protein antagonists & inhibitors, Humans, Male, Protein Domains, Protein Tyrosine Phosphatase, Non-Receptor Type 6 immunology, CD52 Antigen immunology, HMGB1 Protein immunology, Lectins immunology, Receptors, Antigen, T-Cell immunology, T-Lymphocytes immunology
- Abstract
CD52, a glycophosphatidylinositol (GPI)-anchored glycoprotein, is released in a soluble form following T cell activation and binds to the Siglec (sialic acid-binding Ig-like lectin)-10 receptor on T cells to suppress their function. We show that binding of CD52-Fc to Siglec-10 and T cell suppression requires the damage-associated molecular pattern (DAMP) protein, high-mobility group box 1 (HMGB1). CD52-Fc bound specifically to the proinflammatory Box B domain of HMGB1, and this in turn promoted binding of the CD52 N-linked glycan, in α-2,3 sialic acid linkage with galactose, to Siglec-10. Suppression of T cell function was blocked by anti-HMGB1 antibody or the antiinflammatory Box A domain of HMGB1. CD52-Fc induced tyrosine phosphorylation of Siglec-10 and was recovered from T cells complexed with HMGB1 and Siglec-10 in association with SHP1 phosphatase and the T cell receptor (TCR). Thus, soluble CD52 exerts a concerted immunosuppressive effect by first sequestering HMGB1 to nullify its proinflammatory Box B, followed by binding to the inhibitory Siglec-10 receptor, triggering recruitment of SHP1 to the intracellular immunoreceptor tyrosine-based inhibitory motif of Siglec-10 and its interaction with the TCR. This mechanism may contribute to immune-inflammatory homeostasis in pathophysiologic states and underscores the potential of soluble CD52 as a therapeutic agent., Competing Interests: The authors declare no conflict of interest., (Copyright © 2018 the Author(s). Published by PNAS.)
- Published
- 2018
- Full Text
- View/download PDF
23. Genome-wide analysis reveals no evidence of trans chromosomal regulation of mammalian immune development.
- Author
-
Johanson TM, Coughlan HD, Lun ATL, Bediaga NG, Naselli G, Garnham AL, Harrison LC, Smyth GK, and Allan RS
- Subjects
- Animals, Chromatin chemistry, Chromatin genetics, Chromatin metabolism, Chromosomes, Mammalian chemistry, Chromosomes, Mammalian metabolism, DNA chemistry, DNA genetics, DNA metabolism, Flow Cytometry, Genome, Humans, Male, Mice, Mice, Inbred C57BL, Nucleic Acid Conformation, Stereoisomerism, Chromosomes, Mammalian genetics, Gene Expression Regulation, Immunity, Cellular genetics, Mammals physiology
- Abstract
It has been proposed that interactions between mammalian chromosomes, or transchromosomal interactions (also known as kissing chromosomes), regulate gene expression and cell fate determination. Here we aimed to identify novel transchromosomal interactions in immune cells by high-resolution genome-wide chromosome conformation capture. Although we readily identified stable interactions in cis, and also between centromeres and telomeres on different chromosomes, surprisingly we identified no gene regulatory transchromosomal interactions in either mouse or human cells, including previously described interactions. We suggest that advances in the chromosome conformation capture technique and the unbiased nature of this approach allow more reliable capture of interactions between chromosomes than previous methods. Overall our findings suggest that stable transchromosomal interactions that regulate gene expression are not present in mammalian immune cells and that lineage identity is governed by cis, not trans chromosomal interactions., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2018
- Full Text
- View/download PDF
24. Cord Blood CD8 + T Cells Have a Natural Propensity to Express IL-4 in a Fatty Acid Metabolism and Caspase Activation-Dependent Manner.
- Author
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Zhang Y, Maksimovic J, Huang B, De Souza DP, Naselli G, Chen H, Zhang L, Weng K, Liang H, Xu Y, Wentworth JM, Huntington ND, Oshlack A, Gong S, Kallies A, Vuillermin P, Yang M, and Harrison LC
- Subjects
- Biopsy, CD8-Positive T-Lymphocytes drug effects, CD8-Positive T-Lymphocytes metabolism, Caspase 3 metabolism, Caspase Inhibitors pharmacology, Child, Child, Preschool, Colitis, Ulcerative diagnostic imaging, Colitis, Ulcerative pathology, Colon diagnostic imaging, Colon immunology, Colon pathology, Colonoscopy, Fatty Acids metabolism, Female, Fetal Blood cytology, Fetal Blood immunology, Humans, Infant, Interleukin-2 immunology, Interleukin-2 metabolism, Interleukin-2 Receptor alpha Subunit immunology, Interleukin-2 Receptor alpha Subunit metabolism, Interleukin-4 immunology, Lymphocyte Activation immunology, Male, CD8-Positive T-Lymphocytes immunology, Cell Differentiation immunology, Colitis, Ulcerative immunology, Interleukin-4 metabolism
- Abstract
How T cells differentiate in the neonate may critically determine the ability of the infant to cope with infections, respond to vaccines and avert allergies. Previously, we found that naïve cord blood CD4
+ T cells differentiated toward an IL-4-expressing phenotype when activated in the presence of TGF-β and monocyte-derived inflammatory cytokines, the latter are more highly secreted by infants who developed food allergy. Here, we show that in the absence of IL-2 or IL-12, naïve cord blood CD8+ T cells have a natural propensity to differentiate into IL-4-producing non-classic TC 2 cells when they are activated alone, or in the presence of TGF-β and/or inflammatory cytokines. Mechanistically, non-classic TC 2 development is associated with decreased expression of IL-2 receptor alpha (CD25) and glycolysis, and increased fatty acid metabolism and caspase-dependent cell death. Consequently, the short chain fatty acid, sodium propionate (NaPo), enhanced IL-4 expression, but exogenous IL-2 or pan-caspase inhibition prevented IL-4 expression. In children with endoscopically and histologically confirmed non-inflammatory bowel disease and non-infectious pediatric idiopathic colitis, the presence of TGF-β, NaPo, and IL-1β or TNF-α promoted TC 2 differentiation in vitro . In vivo , colonic mucosa of children with colitis had significantly increased expression of IL-4 in CD8+ T cells compared with controls. In addition, activated caspase-3 and IL-4 were co-expressed in CD8+ T cells in the colonic mucosa of children with colitis. Thus, in the context of colonic inflammation and limited IL-2 signaling, CD8+ T cells differentiate into non-classic TC 2 that may contribute to the pathology of inflammatory/allergic diseases in children.- Published
- 2018
- Full Text
- View/download PDF
25. The polycomb repressive complex 2 governs life and death of peripheral T cells.
- Author
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Zhang Y, Kinkel S, Maksimovic J, Bandala-Sanchez E, Tanzer MC, Naselli G, Zhang JG, Zhan Y, Lew AM, Silke J, Oshlack A, Blewitt ME, and Harrison LC
- Subjects
- Animals, Cell Survival immunology, Enhancer of Zeste Homolog 2 Protein, Female, Humans, Interferon-gamma immunology, Interleukin-10 immunology, Listeria monocytogenes immunology, Listeriosis immunology, Listeriosis pathology, Male, Mice, T-Lymphocytes, Helper-Inducer cytology, Apoptosis immunology, Cell Differentiation immunology, Gene Silencing immunology, Polycomb Repressive Complex 2 immunology, T-Lymphocytes, Helper-Inducer immunology
- Abstract
Differentiation of naïve CD4(+) T cells into effector (Th1, Th2, and Th17) and induced regulatory (iTreg) T cells requires lineage-specifying transcription factors and epigenetic modifications that allow appropriate repression or activation of gene transcription. The epigenetic silencing of cytokine genes is associated with the repressive H3K27 trimethylation mark, mediated by the Ezh2 or Ezh1 methyltransferase components of the polycomb repressive complex 2 (PRC2). Here we show that silencing of the Ifng, Gata3, and Il10 loci in naïve CD4(+) T cells is dependent on Ezh2. Naïve CD4(+) T cells lacking Ezh2 were epigenetically primed for overproduction of IFN-γ in Th2 and iTreg and IL-10 in Th2 cells. In addition, deficiency of Ezh2 accelerated effector Th cell death via death receptor-mediated extrinsic and intrinsic apoptotic pathways, confirmed in vivo for Ezh2-null IFN-γ-producing CD4(+) and CD8(+) T cells responding to Listeria monocytogenes infection. These findings demonstrate the key role of PRC2/Ezh2 in differentiation and survival of peripheral T cells and reveal potential immunotherapeutic targets., (© 2014 by The American Society of Hematology.)
- Published
- 2014
- Full Text
- View/download PDF
26. Genome-wide DNA methylation analysis identifies hypomethylated genes regulated by FOXP3 in human regulatory T cells.
- Author
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Zhang Y, Maksimovic J, Naselli G, Qian J, Chopin M, Blewitt ME, Oshlack A, and Harrison LC
- Subjects
- Amino Acid Motifs, CpG Islands, Epigenesis, Genetic, Forkhead Transcription Factors metabolism, Genome, Human, Humans, Immunophenotyping, Male, Oligonucleotide Array Sequence Analysis methods, Promoter Regions, Genetic, Protein Binding, Protein Structure, Tertiary, DNA Methylation, Forkhead Transcription Factors genetics, Gene Expression Regulation, T-Lymphocytes, Regulatory cytology
- Abstract
Regulatory T cells (Treg) prevent the emergence of autoimmune disease. Prototypic natural Treg (nTreg) can be reliably identified by demethylation at the Forkhead-box P3 (FOXP3) locus. To explore the methylation landscape of nTreg, we analyzed genome-wide methylation in human naive nTreg (rTreg) and conventional naive CD4(+) T cells (Naive). We detected 2315 differentially methylated cytosine-guanosine dinucleotides (CpGs) between these 2 cell types, many of which clustered into 127 regions of differential methylation (RDMs). Activation changed the methylation status of 466 CpGs and 18 RDMs in Naive but did not alter DNA methylation in rTreg. Gene-set testing of the 127 RDMs showed that promoter methylation and gene expression were reciprocally related. RDMs were enriched for putative FOXP3-binding motifs. Moreover, CpGs within known FOXP3-binding regions in the genome were hypomethylated. In support of the view that methylation limits access of FOXP3 to its DNA targets, we showed that increased expression of the immune suppressive receptor T-cell immunoglobulin and immunoreceptor tyrosine-based inhibitory motif domain (TIGIT), which delineated Treg from activated effector T cells, was associated with hypomethylation and FOXP3 binding at the TIGIT locus. Differential methylation analysis provides insight into previously undefined human Treg signature genes and their mode of regulation.
- Published
- 2013
- Full Text
- View/download PDF
27. Adult pancreas side population cells expand after β cell injury and are a source of insulin-secreting cells.
- Author
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Banakh I, Gonez LJ, Sutherland RM, Naselli G, and Harrison LC
- Subjects
- ATP-Binding Cassette Transporters metabolism, Age Factors, Animals, Cell Culture Techniques, Cell Differentiation, Cell Proliferation, Female, Flow Cytometry, Homeodomain Proteins metabolism, Insulin-Secreting Cells metabolism, Insulin-Secreting Cells pathology, Male, Mice, Pancreas metabolism, Pancreas surgery, Side-Population Cells metabolism, Stem Cells metabolism, Trans-Activators metabolism, Insulin-Secreting Cells cytology, Pancreas cytology, Side-Population Cells cytology, Stem Cells cytology
- Abstract
Pancreas stem cells are a potential source of insulin-producing β cells for the therapy of diabetes. In adult tissues the 'side population' (SP) of cells that effluxes the DNA binding dye Hoechst 33342 through ATP-binding cassette transporters has stem cell properties. We hypothesised therefore that the SP would expand in response to β cell injury and give rise to functional β cells. SP cells were flow sorted from dissociated pancreas cells of adult mice, analysed for phenotype and cultured with growth promoting and differentiation factors before analysis for hormone expression and glucose-stimulated insulin secretion. SP cell number and colony forming potential (CFP) increased significantly in models of type diabetes, and after partial pancreatectomy, in the absence of hyperglycaemia. SP cells, ∼1% of total pancreas cells at 1 week of age, were enriched >10-fold for CFP compared to non-SP cells. Freshly isolated SP cells contained no insulin protein or RNA but expressed the homeobox transcription factor Pdx1 required for pancreas development and β cell function. Pdx1, along with surface expression of CD326 (Ep-Cam), was a marker of the colony forming and proliferation potential of SP cells. In serum-free medium with defined factors, SP cells proliferated and differentiated into islet hormone-expressing cells that secreted insulin in response to glucose. Insulin expression was maintained when tissue was transplanted within vascularised chambers into diabetic mice. SP cells in the adult pancreas expand in response to β cell injury and are a source of β cell progenitors with potential for the treatment of diabetes.
- Published
- 2012
- Full Text
- View/download PDF
28. acDCs enhance human antigen-specific T-cell responses.
- Author
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Martinuzzi E, Afonso G, Gagnerault MC, Naselli G, Mittag D, Combadière B, Boitard C, Chaput N, Zitvogel L, Harrison LC, and Mallone R
- Subjects
- Animals, Antigen Presentation, Cancer Vaccines administration & dosage, Cell Proliferation, Coculture Techniques, Cytokines biosynthesis, Cytokines blood, Dendritic Cells cytology, Dendritic Cells drug effects, Epitopes administration & dosage, Granulocyte-Macrophage Colony-Stimulating Factor pharmacology, HLA Antigens administration & dosage, Humans, Interleukin-4 pharmacology, Lymphocyte Activation, Melanoma immunology, Melanoma therapy, Melanoma-Specific Antigens administration & dosage, Mice, Recombinant Proteins, T-Lymphocytes cytology, T-Lymphocytes drug effects, Vaccination, Antigens administration & dosage, Dendritic Cells immunology, T-Lymphocytes immunology
- Abstract
Detection of human Ag-specific T cells is limited by sensitivity and blood requirements. As dendritic cells (DCs) can potently stimulate T cells, we hypothesized that their induction in PBMCs in situ could link Ag processing and presentation to Ag-specific T-cell activation. To this end, unfractionated PBMCs (fresh or frozen) or whole blood were incubated for 48 hours with protein or peptide Ag together with different DC-activating agents to rapidly and sequentially induce, pulse, and mature DCs. DC activation was therefore lined up with Ag recognition by neighboring T cells, thus telescoping the sequential steps of T-cell activation. Efficient processing of protein Ags made prior knowledge of epitopes and HLA restrictions dispensable. While reducing stimulation time, manipulation and blood requirements, in situ DC induction specifically amplified Ag-specific T-cell responses (cytokine secretion, proliferation, CD137/CD154 up-regulation, and binding of peptide-HLA multimers). IL-1β, although released by DCs, was also secreted in an Ag-specific fashion, thus providing an indirect biomarker of T-cell responses. These accelerated cocultured DC (acDC) assays offered a sensitive means with which to evaluate T-cell responses to viral and melanoma Ag vaccination, and may therefore find application for immune monitoring in viral, tumor, autoimmune, and transplantation settings.
- Published
- 2011
- Full Text
- View/download PDF
29. Pancreatic expression and mitochondrial localization of the progestin-adipoQ receptor PAQR10.
- Author
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Góñez LJ, Naselli G, Banakh I, Niwa H, and Harrison LC
- Subjects
- Animals, Blotting, Northern, Cell Line, Gene Expression, Mice, Microscopy, Confocal, Pancreas metabolism, RNA, Messenger genetics, Reverse Transcriptase Polymerase Chain Reaction, Insulin-Secreting Cells metabolism, Mitochondria metabolism, Receptors, Cell Surface metabolism, Receptors, Progesterone metabolism
- Abstract
Steroid hormones induce changes in gene expression by binding to intracellular receptors that then translocate to the nucleus. Steroids have also been shown to rapidly modify cell function by binding to surface membrane receptors. We identified a candidate steroid membrane receptor, the progestin and adipoQ receptor (PAQR) 10, a member of the PAQR family, in a screen for genes differentially expressed in mouse pancreatic beta-cells. PAQR10 gene expression was tissue restricted compared with other PAQRs. In the mouse embryonic pancreas, PAQR10 expression mirrored development of the endocrine lineage, with PAQR10 protein expression confined to endocrine islet-duct structures in the late embryo and neonate. In the adult mouse pancreas, PAQR10 was expressed exclusively in islet cells except for its reappearance in ducts of maternal islets during pregnancy. PAQR10 has a predicted molecular mass of 29 kDa, comprises seven transmembrane domains, and, like other PAQRs, is predicted to have an intracellular N-terminus and an extracellular C-terminus. In silico analysis indicated that three members of the PAQR family, PAQRs 9, 10, and 11, have a candidate mitochondrial localization signal (MLS) at the N-terminus. We showed that PAQR10 has a functional N-terminal MLS and that the native protein localizes to mitochondria. PAQR10 is structurally related to some bacterial hemolysins, pore-forming virulence factors that target mitochondria and regulate apoptosis. We propose that PAQR10 may act at the level of the mitochondrion to regulate pancreatic endocrine cell development/survival.
- Published
- 2008
- Full Text
- View/download PDF
30. Inflammatory status in patients with chronic renal failure: the role of PTX3 and pro-inflammatory cytokines.
- Author
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Malaponte G, Libra M, Bevelacqua Y, Merito P, Fatuzzo P, Rapisarda F, Cristina M, Naselli G, Stivala F, Mazzarino MC, and Castellino P
- Subjects
- Aged, Cell Separation, Cytokines blood, Female, Fibrinogen metabolism, Humans, Inflammation, Inflammation Mediators blood, Lipopolysaccharides pharmacology, Male, Monocytes drug effects, Monocytes metabolism, Renal Dialysis, Subcellular Fractions drug effects, Time Factors, Uremia blood, C-Reactive Protein metabolism, Cytokines metabolism, Inflammation Mediators metabolism, Kidney Failure, Chronic pathology, Serum Amyloid P-Component metabolism
- Abstract
Increased plasma levels of several acute phase proteins, such as C-reactive protein (CRP), have been documented among different patients with chronic renal failure (CRF). The aim of the present study was to determine whether pentraxin-3 (PTX3) is a reliable marker of inflammation in CRF. Plasma samples and monocytes were taken from 43 patients before and after undergoing haemodialysis (HD), from 45 uraemic patients (UR) without HD treatment and from 25 healthy controls. Plasma and monocyte samples were analyzed by ELISA for levels of PTX3, tumor necrosis factor-alpha (TNF-alpha), interleukin-1beta (IL-1beta) and interleukin-6 (IL-6); all of these protein levels were higher in CRF patients with respect to the controls. After HD, plasma PTX3 and cytokine levels increased. Inter- and intra-individual variations in CRP were observed in HD patients, while PTX3 plasma levels were stable. Release of PTX3, TNF-alpha, IL-1beta and IL-6 by unstimulated monocytes from patients, before and after HD, was higher with respect to UR patients and controls. After lipopolysaccharide stimulation, all values were higher in patients before HD than those in UR patients, but lower when compared to those in the controls. In contrast, no changes were observed after HD. A significant correlation among plasma PTX3 versus fibrinogen, TNF-alpha and IL-1beta was observed in HD and UR patients. Collectively, these data suggest that PTX3 protein may represent an additional and stable marker of inflammation in CRF.
- Published
- 2007
31. Conditional expression demonstrates the role of the homeodomain transcription factor Pdx1 in maintenance and regeneration of beta-cells in the adult pancreas.
- Author
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Holland AM, Góñez LJ, Naselli G, Macdonald RJ, and Harrison LC
- Subjects
- Animals, Diabetes Mellitus, Experimental, Doxycycline pharmacology, Gene Expression Profiling, Insulin biosynthesis, Islets of Langerhans drug effects, Mice, Mice, Knockout, Mice, Transgenic, Regeneration physiology, Gene Expression Regulation physiology, Homeodomain Proteins biosynthesis, Islets of Langerhans physiology, Trans-Activators biosynthesis
- Abstract
The homeodomain transcription factor Pdx1 is essential for pancreas development. To investigate the role of Pdx1 in the adult pancreas, we employed a mouse model in which transcription of Pdx1 could be reversibly repressed by administration of doxycycline. Repression of Pdx1 in adult mice impaired expression of insulin and glucagon, leading to diabetes within 14 days. Pdx1 repression was associated with increased cell proliferation predominantly in the exocrine pancreas and upregulation of genes implicated in pancreas regeneration. Following withdrawal of doxycycline and derepression of Pdx1, normoglycemia was restored within 28 days; during this period, Pdx1(+)/Ins(+) and Pdx(+)/Ins(-) cells were observed in association with the duct epithelia. These findings confirm that Pdx1 is required for beta-cell function in the adult pancreas and indicate that in the absence of Pdx1 expression, a regenerative program is initiated with the potential for Pdx1-dependent beta-cell neogenesis.
- Published
- 2005
- Full Text
- View/download PDF
32. Harp (harmonin-interacting, ankyrin repeat-containing protein), a novel protein that interacts with harmonin in epithelial tissues.
- Author
-
Johnston AM, Naselli G, Niwa H, Brodnicki T, Harrison LC, and Góñez LJ
- Subjects
- Amino Acid Sequence, Animals, Base Sequence, Blotting, Northern, Carrier Proteins genetics, Cell Cycle Proteins, Chromosome Mapping, Cytoskeletal Proteins, Gene Expression Profiling, Intracellular Signaling Peptides and Proteins, Mice, Molecular Sequence Data, Nerve Tissue Proteins genetics, Two-Hybrid System Techniques, Ankyrin Repeat physiology, Carrier Proteins metabolism, Epithelium metabolism, RNA, Messenger metabolism
- Abstract
Mutations in the triple PDZ domain-containing protein harmonin have been identified as the cause of Usher deafness syndrome type 1C. Independently, we identified harmonin in a screen for genes expressed in pancreatic beta cells. Using a yeast two-hybrid assay, we show that the first PDZ domain of harmonin interacts with a novel protein, designated harp for harmonin-interacting, ankyrin repeat-containing protein. This interaction was confirmed in an over-expression system and in mammalian cells, and shown to be mediated by the three C-terminal amino acids of harp. Harp is expressed in many of the same epithelia as harmonin and co-localization of native harp and harmonin was demonstrated by confocal microscopy in pancreatic duct epithelium and in a pancreatic beta-cell line. Harp, predicted molecular mass 48 kDa, has a domain structure which includes three ankyrin repeats and a sterile alpha motif. Human harp maps to chromosome 16, and its mouse homologue to chromosome 7. Sequences with similarity to harp include the sans gene, mutations of which are responsible for deafness in the Jackson shaker 2 (js) mutant mouse and in human Usher syndrome type 1G. The functional domain structures of harp and harmonin, their interaction under native conditions and their co-localization suggest they constitute a scaffolding complex to facilitate signal transduction in epithelia.
- Published
- 2004
- Full Text
- View/download PDF
33. Distinct distribution of laminin and its integrin receptors in the pancreas.
- Author
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Jiang FX, Naselli G, and Harrison LC
- Subjects
- Animals, Immunoblotting, Integrins genetics, Laminin genetics, Mice, Mice, Inbred CBA, Pancreas ultrastructure, Precipitin Tests, RNA, Messenger metabolism, Reverse Transcriptase Polymerase Chain Reaction, Integrins metabolism, Laminin metabolism, Pancreas metabolism
- Abstract
Tissue function is regulated by the extracellular microenvironment including cell basement membranes, in which laminins are a major component. Previously, we found that laminin-1 promotes differentiation and survival of pancreatic islet cells. Here we characterize the expression pattern of laminins and their integrin receptors in adult pancreas. Although they are expressed in the basement membrane of acinar cells and duct epithelium, no laminin chains examined were detected extracellularly in the pancreatic islets. In contrast to laminin beta(1)- and gamma(1)-chains, the alpha(1)-chain, unique to laminin-1, was not detected. Laminin-10 (alpha(5)beta(1)gamma(1)) was expressed in acinar tissue, whereas laminins-2 (alpha(2)beta(1)gamma(1)) and -10 were expressed in the blood vessels. The laminin connector molecule, nidogen-1, had a distribution similar to that of laminin beta(1) and gamma(1), whereas fibulin-1 and -2, which compete with nidogen-1, were mostly confined to blood vessels. Integrin subunits alpha(6) and alpha(3) were detected in acinar cells and duct epithelial cells, but alpha(6) was absent in islet cells. Integrin alpha(6)beta(4) was detected only in duct cells, alpha(6)beta(1) in both acinar and ductal cells, and alpha(3)beta(1) in acinar, duct, and islet cells. These findings are a basis for further investigation of the role of extracellular matrix molecules and their receptors in pancreas function.
- Published
- 2002
- Full Text
- View/download PDF
34. Lack of expression of Gp-130 makes pancreatic beta cell lines unresponsive to the IL-6 family of cytokines.
- Author
-
Naselli G, Deaizpurua HJ, Thomas HE, Johnston AM, and Kay TW
- Subjects
- Animals, Antigens, Polyomavirus Transforming genetics, DNA-Binding Proteins analysis, Dimerization, Gene Expression, Insulinoma metabolism, Interleukin-11 metabolism, Interleukin-11 pharmacology, Interleukin-11 Receptor alpha Subunit, Islets of Langerhans chemistry, Islets of Langerhans drug effects, Mice, Mice, Inbred NOD, Mice, Transgenic, Pancreatic Neoplasms metabolism, Receptors, Cytokine analysis, Receptors, Interleukin genetics, Receptors, Interleukin metabolism, Receptors, Interleukin-11, STAT1 Transcription Factor, STAT3 Transcription Factor, Trans-Activators analysis, Transfection, Tumor Cells, Cultured, Interleukin-6 pharmacology, Islets of Langerhans metabolism, Morpholines analysis
- Abstract
Cytokine receptors from the IL-6 receptor family are comprised of ligand specific alpha chains and a common signalling chain, gp-130, which is also required for high affinity binding. A cDNA library generated from the beta-TC3 SV40 T-antigen transformed insulinoma cell line was screened for members of this receptor family potentially relevant to both beta cell development and autoimmunity. Degenerate oligonucleotide primers to a consensus region of these receptors were used and the IL-11 receptor alpha chain was identified. Despite confirmation of IL-11 receptor mRNA expression, iodinated bioactive IL-11 did not bind specifically to beta-TC3 cells and gp-130-dependent cytokines did not elicit signalling events in beta cell lines. This was explained by absence of gp-130 protein or mRNA in the beta cell lines tested and in primary islets. We conclude from these results that the previously recognised effects of IL-6 family member cytokines on pancreatic islets must be indirect via other non-beta cells within the islet, rather than due to direct effects on beta cells themselves.
- Published
- 2001
- Full Text
- View/download PDF
35. SPAK, a STE20/SPS1-related kinase that activates the p38 pathway.
- Author
-
Johnston AM, Naselli G, Gonez LJ, Martin RM, Harrison LC, and DeAizpurua HJ
- Subjects
- Amino Acid Sequence, Animals, Base Sequence, Brain enzymology, Cell Line, Transformed, Cell Nucleus enzymology, Cytoplasm enzymology, DNA, Complementary genetics, Enzyme Induction, Genes, Humans, Islets of Langerhans enzymology, Islets of Langerhans pathology, Molecular Sequence Data, Multigene Family, Neoplasm Proteins genetics, Neoplasm Proteins isolation & purification, Neoplasm Proteins physiology, Nerve Tissue Proteins genetics, Nerve Tissue Proteins isolation & purification, Nerve Tissue Proteins physiology, Organ Specificity, Phosphorylation, Protein Processing, Post-Translational, Protein Serine-Threonine Kinases isolation & purification, Protein Serine-Threonine Kinases physiology, Protein Structure, Tertiary, Rats, Recombinant Fusion Proteins isolation & purification, Recombinant Fusion Proteins physiology, Sequence Alignment, Sequence Homology, Amino Acid, Stress, Physiological enzymology, Transfection, p38 Mitogen-Activated Protein Kinases, MAP Kinase Signaling System physiology, Mitogen-Activated Protein Kinases physiology, Protein Serine-Threonine Kinases genetics
- Abstract
We have cloned a member of the STE20/SPS1 protein kinase family from a transformed rat pancreatic beta cell line. SPAK (STE20/SPS1-related, proline alanine-rich kinase) belongs to the SPS1 subfamily of STE20 kinases and is highly conserved between species. SPAK is expressed ubiquitously, although preferentially in brain and pancreas. Biochemical characterization of SPAK catalytic activity demonstrates that is a serine/threonine kinase that can phosphorylate itself and an exogenous substrate in vitro. SPAK is immunoprecipitated from transfected mammalian cells as a complex with another, as yet uncharacterized, serine/threonine kinase which is capable of phosphorylating catalytically-inactive SPAK and myelin basic protein in an in vitro kinase assay. SPAK specifically activates the p38 pathway in cotransfection assays. Like MST1 and MST2, SPAK contains a putative caspase cleavage site at the junction of the catalytic domain and the C-terminal region. Full-length SPAK is expressed in the cytoplasm in transfected cells, while a mutant corresponding to caspase-cleaved SPAK is expressed predominantly in the nucleus. The similarity of SPAK to other SPS1 family members, its ability to activate the p38 pathway, in addition to its putative caspase cleavage site, provide evidence that SPAK may act as a novel mediator of stress-activated signals. Oncogene (2000) 19, 4290 - 4297
- Published
- 2000
- Full Text
- View/download PDF
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