8 results on '"Gionechetti F"'
Search Results
2. Does diet breadth affect the complexity of the phytophagous insect microbiota? The case study of Chrysomelidae
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Matteo Brunetti, Giulia Magoga, Matteo Montagna, Alessio De Biase, Fabrizia Gionechetti, Brunetti, M., Magoga, G., Gionechetti, F., De Biase, A., and Montagna, M.
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Zoology ,Generalist and specialist species ,Microbiology ,leaf beetles ,Symbiosis ,RNA, Ribosomal, 16S ,microbiota ,Animals ,Chrysomelidae ,16S rRNA ,Rickettsia ,Ecology, Evolution, Behavior and Systematics ,Trophic level ,Aphid ,biology ,fungi ,food and beverages ,Plants ,biology.organism_classification ,Eumolpinae ,Diet ,Coleoptera ,diet ,Aphids ,Wolbachia ,Buchnera ,Leaf beetle - Abstract
Chrysomelidae is a family of phytophagous insects with a highly variable degree of trophic specialization. The aim of this study is to test whether species feeding on different plants (generalists) harbour more complex microbiotas than those feeding on a few or a single plant species (specialists). The microbiota of representative leaf beetle species was characterized with a metabarcoding approach targeting V1–V2 and V4 regions of the bacterial 16S rRNA. Almost all the analysed species harbour at least one reproductive manipulator bacteria (e.g., Wolbachia, Rickettsia). Two putative primary symbionts, previously isolated only from a single species (Bromius obscurus), have been detected in two species of the same subfamily, suggesting a widespread symbiosis in Eumolpinae. Surprisingly, the well-known aphid symbiont Buchnera is well represented in the microbiota of Orsodacne humeralis. Moreover, in this study, using Hill numbers to dissect the components of the microbiota diversity (abundant and rare bacteria), it has been demonstrated that generalist insect species harbour a more diversified microbiota than specialists. The higher microbiota diversity associated with a wider host-plant spectrum could be seen as an adaptive trait, conferring new metabolic potential useful to expand the diet breath, or as a result of environmental stochastic acquisition conveyed by diet.
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- 2021
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3. DNA metabarcoding and morphological analysis - Assessment of zooplankton biodiversity in transitional waters
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David Stanković, Alberto Pallavicini, Anna Schroeder, Elisa Camatti, Marco Pansera, Fabrizia Gionechetti, Schroeder, A., Stankovic, D., Pallavicini, A., Gionechetti, F., Pansera, M., and Camatti, E.
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0106 biological sciences ,Transitional waters ,Biodiversity ,Aquatic Science ,Biology ,Oceanography ,010603 evolutionary biology ,01 natural sciences ,Zooplankton ,DNA metabarcoding ,Biomonitoring ,Cytochrome C Oxidase subunit 1 (COI) ,Animals ,DNA Barcoding, Taxonomic ,Marine ecosystem ,Ecosystem ,14. Life underwater ,Taxonomic rank ,Transitional water ,Ecology ,010604 marine biology & hydrobiology ,General Medicine ,DNA ,Pollution ,Taxon ,Species richness - Abstract
Zooplankton biodiversity assessment is a crucial element in monitoring marine ecosystem processes and community responses to environmental alterations. In order to evaluate the suitability of metabarcoding for zooplankton biodiversity assessment and biomonitoring as a fast and more cost-effective method, seasonal zooplankton sampling was carried out in the Venice Lagoon and the nearby coastal area (Northern Adriatic Sea). The molecular analysis showed higher taxa richness compared to the classical morphological method (224 vs. 88 taxa), discriminating better the meroplanktonic component, morphologically identified only up to order level. Both methods revealed a similar spatio-temporal distribution pattern and the sequence abundances and individual counts were significantly correlated for various taxonomic groups. These results indicate that DNA metabarcoding is an efficient tool for biodiversity assessments in ecosystems with high spatial and temporal variability, where high sampling effort is required as well as fast alert systems for non-native species (NIS).
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- 2019
4. Genital Dysbiosis and Different Systemic Immune Responses Based on the Trimester of Pregnancy in SARS-CoV-2 Infection.
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Campisciano G, Sorz A, Cason C, Zanotta N, Gionechetti F, Piazza M, Carli P, Uliana FM, Ballaminut L, Ricci G, De Seta F, Maso G, and Comar M
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- Humans, Female, Pregnancy, Adult, Infant, Newborn, Cytokines metabolism, Pregnancy Trimesters immunology, Immunoglobulin G blood, Immunoglobulin G immunology, Microbiota immunology, COVID-19 immunology, Dysbiosis immunology, Dysbiosis microbiology, SARS-CoV-2 immunology, Pregnancy Complications, Infectious immunology, Pregnancy Complications, Infectious microbiology, Pregnancy Complications, Infectious virology, Vagina microbiology, Vagina immunology, Vagina virology
- Abstract
Respiratory infections are common in pregnancy with conflicting evidence supporting their association with neonatal congenital anomalies, especially during the first trimester. We profiled cytokine and chemokine systemic responses in 242 pregnant women and their newborns after SARS-CoV-2 infection, acquired in different trimesters. Also, we tested transplacental IgG passage and maternal vaginal-rectal microbiomes. IgG transplacental passage was evident, especially with infection acquired in the first trimester. G-CSF concentration-involved in immune cell recruitment-decreased in infected women compared to uninfected ones: a beneficial event for the reduction of inflammation but detrimental to ability to fight infections at birth. The later the infection was acquired, the higher the systemic concentration of IL-8, IP-10, and MCP-1, associated with COVID-19 disease severity. All infected women showed dysbiosis of vaginal and rectal microbiomes, compared to uninfected ones. Two newborns tested positive for SARS-CoV-2 within the first 48 h of life. Notably, their mothers had acute infection at delivery. Although respiratory infections in pregnancy are reported to affect babies' health, with SARS-CoV-2 acquired early during gestation this risk seems low because of the maternal immune response. The observed vaginal and rectal dysbiosis could be relevant for neonatal microbiome establishment, although in our series immediate neonatal outcomes were reassuring.
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- 2024
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5. Insights into the Oral Bacterial Microbiota of Sows.
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Hattab J, Marruchella G, Pallavicini A, Gionechetti F, Mosca F, Trachtman AR, Lanci L, Gabrielli L, and Tiscar PG
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The investigation of bacterial microbiota represents a developing research field in veterinary medicine intended to look for correlations between animal health and the balance within bacterial populations. The aim of the present work was to define the bacterial microbiota of the oral cavity of healthy sows, which had not been thoroughly described so far. In total, 22 samples of oral fluid were collected and analyzed by 16S-rRNA gene sequencing. CLC Genomics Workbench 20.0 (QIAGEN Digital Insights, Aarhus, Denmark) was then used to examine the results. The predominant orders were Lactobacillales, Clostridiales, and Corynebacteriales. Lactobacillaceae, Corynebacteriaceae, Moraxellaceae, Aerococcaceae, and Staphylococcaceae were the most represented families. As regards the most abundant genera, Lactobacillus , Corynebacterium , Acinetobacter , Staphylococcus , Rothia , Aerococcus , and Clostridium can be pointed out as the bacterial core microbiota. Sows were also divided into "gestating" and "lactating" groups, and mild differences were found between pregnant and lactating sows. The data herein described represent an original contribution to the knowledge of the porcine bacterial microbiota. Moreover, the choice of sows as experimental animals was strategic for identifying the adult microbial community. These data provide a basis for further studies on the oral bacterial microbiota of pigs.
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- 2021
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6. Bacterial Microbiota of Rice Roots: 16S-Based Taxonomic Profiling of Endophytic and Rhizospheric Diversity, Endophytes Isolation and Simplified Endophytic Community.
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Moronta-Barrios F, Gionechetti F, Pallavicini A, Marys E, and Venturi V
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Rice is currently the most important food crop in the world and we are only just beginning to study the bacterial associated microbiome. It is of importance to perform screenings of the core rice microbiota and also to develop new plant-microbe models and simplified communities for increasing our understanding about the formation and function of its microbiome. In order to begin to address this aspect, we have performed a 16S rDNA taxonomic bacterial profiling of the rhizosphere and endorhizosphere of two high-yield rice cultivars-Pionero 2010 FL and DANAC SD20A-extensively grown in Venezuela in 2014. Fifteen putative bacterial endophytes were then isolated from surface-sterilized roots and further studied in vitro and in planta . We have then performed inoculation of rice seedlings with a simplified community composed by 10 of the isolates and we have tracked them in the course of 30 days in greenhouse cultivation. The results obtained suggest that a set was able to significantly colonize together the rice endorhizospheres, indicating possible cooperation and the ability to form a stable multispecies community. This approach can be useful in the development of microbial solutions for a more sustainable rice production., Competing Interests: The authors declare no conflict of interest.
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- 2018
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7. pKBuS13, a KPC-2-encoding plasmid from Klebsiella pneumoniae sequence type 833, carrying Tn4401b inserted into an Xer site-specific recombination locus.
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Garbari L, Busetti M, Dolzani L, Petix V, Knezevich A, Bressan R, Gionechetti F, Tonin EA, and Lagatolla C
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- Anti-Bacterial Agents pharmacology, Escherichia coli drug effects, Escherichia coli genetics, Klebsiella pneumoniae drug effects, Microbial Sensitivity Tests, DNA Transposable Elements genetics, Klebsiella pneumoniae genetics, Plasmids genetics
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Here, we report the first detection of a Klebsiella pneumoniae carbapenemase 2 (KPC-2)-producing Klebsiella pneumoniae strain belonging to sequence type 833 (ST833), collected in an Italian hospital from a patient coming from South America. Its bla KPC determinant was carried by a ColE1 plasmid, pKBuS13, that showed the Tn4401b::bla KPC-2 transposon inserted into the regulatory region of an Xer site-specific recombination locus. This interfered with the correct resolution of plasmid multimers into monomers, lowering plasmid stability and leading to overestimation of the number of plasmids harbored by a single host cell. Sequencing of the fragments adjacent to Tn4401b detected a region that did not have significant matches in databases other than the genome of a carbapenem-resistant Escherichia coli strain collected during the same year at a hospital in Boston. This is interesting in an epidemiologic context, as it suggests that despite the absence of tra genes and the instability under nonselective conditions, the circulation of pKBuS13 or of analogous plasmids might be wider than reported., (Copyright © 2015, American Society for Microbiology. All Rights Reserved.)
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- 2015
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8. Endemic carbapenem-resistant Pseudomonas aeruginosa with acquired metallo-beta-lactamase determinants in European hospital.
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Lagatolla C, Tonin EA, Monti-Bragadin C, Dolzani L, Gombac F, Bearzi C, Edalucci E, Gionechetti F, and Rossolini GM
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- Europe, Genotype, Humans, Pseudomonas aeruginosa drug effects, Pseudomonas aeruginosa isolation & purification, Random Amplified Polymorphic DNA Technique, beta-Lactam Resistance drug effects, Carbapenems pharmacology, Drug Resistance genetics, Pseudomonas aeruginosa genetics, beta-Lactam Resistance genetics
- Abstract
Acquired metallo-beta-lactamases (MBLs) can confer broad-spectrum beta-lactam resistance (including carbapenems) not reversible by conventional beta-lactamase inhibitors and are emerging resistance determinants of remarkable clinical importance. In 2001, multidrug-resistant Pseudomonas aeruginosa carrying bla(VIM) MBL genes were found to be widespread (approximately 20% of all P. aeruginosa isolates and 70% of the carbapenem-resistant isolates) at Trieste University Hospital. Clonal diversity and heterogeneity of resistance determinants (either bla(VIM-1)-like or bla(VIM-2)-like) were detected among MBL producers. This evidence is the first that acquired MBLs can rapidly emerge and establish a condition of endemicity in certain epidemiologic settings.
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- 2004
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