84 results on '"Cell production"'
Search Results
2. Upscaling xylem phenology: sample size matters.
- Author
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Silvestro, Roberto, Sylvain, Jean-Daniel, Drolet, Guillaume, Buttò, Valentina, Auger, Isabelle, Mencuccini, Maurizio, and Rossi, Sergio
- Subjects
- *
WOOD chemistry , *PHENOLOGY , *SAMPLE size (Statistics) , *XYLEM , *BALSAM fir , *CELL size , *WOOD - Abstract
Background and Aims Upscaling carbon allocation requires knowledge of the variability at the scales at which data are collected and applied. Trees exhibit different growth rates and timings of wood formation. However, the factors explaining these differences remain undetermined, making samplings and estimations of the growth dynamics a complicated task, habitually based on technical rather than statistical reasons. This study explored the variability in xylem phenology among 159 balsam firs [ Abies balsamea (L.) Mill.]. Methods Wood microcores were collected weekly from April to October 2018 in a natural stand in Quebec, Canada, to detect cambial activity and wood formation timings. We tested spatial autocorrelation, tree size and cell production rates as explanatory variables of xylem phenology. We assessed sample size and margin of error for wood phenology assessment at different confidence levels. Key Results Xylem formation lasted between 40 and 110 d, producing between 12 and 93 cells. No effect of spatial proximity or size of individuals was detected on the timings of xylem phenology. Trees with larger cell production rates showed a longer growing season, starting xylem differentiation earlier and ending later. A sample size of 23 trees produced estimates of xylem phenology at a confidence level of 95 % with a margin of error of 1 week. Conclusions This study highlighted the high variability in the timings of wood formation among trees within an area of 1 km2. The correlation between the number of new xylem cells and the growing season length suggests a close connection between the processes of wood formation and carbon sequestration. However, the causes of the observed differences in xylem phenology remain partially unresolved. We point out the need to carefully consider sample size when assessing xylem phenology to explore the reasons underlying this variability and to allow reliable upscaling of carbon allocation in forests. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
3. Higher growth of the apple (Malus × domestica Borkh.) fruit cortex is supported by resource intensive metabolism during early development
- Author
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Shan Jing and Anish Malladi
- Subjects
Carbon metabolism ,Cell production ,Fruit growth and development ,Fruit load reduction ,Metabolic profiling ,Nitrogen metabolism ,Botany ,QK1-989 - Abstract
Abstract Background The major fleshy tissues of the apple fruit are spatially separable into cortex and pith. These tissues display differential growth during development. Key features of such differential growth, and sink metabolic programs supporting it have not been investigated previously. We hypothesized that differential growth between these fruit tissues is supported by differential sink metabolic programs, particularly during early development. Growth, metabolite concentrations, and transcript abundance of metabolism-related genes were measured to determine characteristics of differential growth and their underlying metabolic programs. Results The cortex displayed > 5-fold higher growth than the pith during early fruit development, indicating that differential growth was established during this period. Further, when resource availability was increased through sink-removal, cortex growth was preferentially enhanced. Greatest diversity in metabolic programs between these tissues was evident during early fruit development. Higher cortex growth during early development was facilitated by increased catabolism of imported carbon (C) resources, sorbitol and sucrose, and the nitrogen (N) resource, asparagine. It was also associated with enhanced primary C metabolism, and C storage as malate and quinate. The pith metabolic program during this period involved limited allocation of C and N to growth, but greater allocation to storage, and enhanced sucrose-sucrose cycling. Conclusions Together, these data indicate that the fruit cortex tissue displays a resource intensive metabolic program during early fruit development. This provides the C backbones, proteins, energy and osmolytes to support its higher growth.
- Published
- 2020
- Full Text
- View/download PDF
4. The StemCellFactory: A Modular System Integration for Automated Generation and Expansion of Human Induced Pluripotent Stem Cells
- Author
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Andreas Elanzew, Bastian Nießing, Daniel Langendoerfer, Oliver Rippel, Tobias Piotrowski, Friedrich Schenk, Michael Kulik, Michael Peitz, Yannik Breitkreuz, Sven Jung, Paul Wanek, Laura Stappert, Robert H. Schmitt, Simone Haupt, Martin Zenke, Niels König, and Oliver Brüstle
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automation ,cell culture ,reprogramming ,induced pluripotent stem cells ,cell production ,Biotechnology ,TP248.13-248.65 - Abstract
While human induced pluripotent stem cells (hiPSCs) provide novel prospects for disease-modeling, the high phenotypic variability seen across different lines demands usage of large hiPSC cohorts to decipher the impact of individual genetic variants. Thus, a much higher grade of parallelization, and throughput in the production of hiPSCs is needed, which can only be achieved by implementing automated solutions for cell reprogramming, and hiPSC expansion. Here, we describe the StemCellFactory, an automated, modular platform covering the entire process of hiPSC production, ranging from adult human fibroblast expansion, Sendai virus-based reprogramming to automated isolation, and parallel expansion of hiPSC clones. We have developed a feeder-free, Sendai virus-mediated reprogramming protocol suitable for cell culture processing via a robotic liquid handling unit that delivers footprint-free hiPSCs within 3 weeks with state-of-the-art efficiencies. Evolving hiPSC colonies are automatically detected, harvested, and clonally propagated in 24-well plates. In order to ensure high fidelity performance, we have implemented a high-speed microscope for in-process quality control, and image-based confluence measurements for automated dilution ratio calculation. This confluence-based splitting approach enables parallel, and individual expansion of hiPSCs in 24-well plates or scale-up in 6-well plates across at least 10 passages. Automatically expanded hiPSCs exhibit normal growth characteristics, and show sustained expression of the pluripotency associated stem cell marker TRA-1-60 over at least 5 weeks (10 passages). Our set-up enables automated, user-independent expansion of hiPSCs under fully defined conditions, and could be exploited to generate a large number of hiPSC lines for disease modeling, and drug screening at industrial scale, and quality.
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- 2020
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- View/download PDF
5. Apoplastic Hydrogen Peroxide in the Growth Zone of the Maize Primary Root. Increased Levels Differentially Modulate Root Elongation Under Well-Watered and Water-Stressed Conditions
- Author
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Priya Voothuluru, Pirjo Mäkelä, Jinming Zhu, Mineo Yamaguchi, In-Jeong Cho, Melvin J. Oliver, John Simmonds, and Robert E. Sharp
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cell elongation ,cell production ,root growth ,hydrogen peroxide ,kinematics ,reactive oxygen species ,Plant culture ,SB1-1110 - Abstract
Reactive oxygen species (ROS) can act as signaling molecules involved in the acclimation of plants to various abiotic and biotic stresses. However, it is not clear how the generalized increases in ROS and downstream signaling events that occur in response to stressful conditions are coordinated to modify plant growth and development. Previous studies of maize (Zea mays L.) primary root growth under water deficit stress showed that cell elongation is maintained in the apical region of the growth zone but progressively inhibited further from the apex, and that the rate of cell production is also decreased. It was observed that apoplastic ROS, particularly hydrogen peroxide (H2O2), increased specifically in the apical region of the growth zone under water stress, resulting at least partly from increased oxalate oxidase activity in this region. To assess the function of the increase in apoplastic H2O2 in root growth regulation, transgenic maize lines constitutively expressing a wheat oxalate oxidase were utilized in combination with kinematic growth analysis to examine effects of increased apoplastic H2O2 on the spatial pattern of cell elongation and on cell production in well-watered and water-stressed roots. Effects of H2O2 removal (via scavenger pretreatment) specifically from the apical region of the growth zone were also assessed. The results show that apoplastic H2O2 positively modulates cell production and root elongation under well-watered conditions, whereas the normal increase in apoplastic H2O2 in water-stressed roots is causally related to down-regulation of cell production and root growth inhibition. The effects on cell production were accompanied by changes in spatial profiles of cell elongation and in the length of the growth zone. However, effects on overall cell elongation, as reflected in final cell lengths, were minor. These results reveal a fundamental role of apoplastic H2O2 in regulating cell production and root elongation in both well-watered and water-stressed conditions.
- Published
- 2020
- Full Text
- View/download PDF
6. Apoplastic Hydrogen Peroxide in the Growth Zone of the Maize Primary Root. Increased Levels Differentially Modulate Root Elongation Under Well-Watered and Water-Stressed Conditions.
- Author
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Voothuluru, Priya, Mäkelä, Pirjo, Zhu, Jinming, Yamaguchi, Mineo, Cho, In-Jeong, Oliver, Melvin J., Simmonds, John, and Sharp, Robert E.
- Subjects
HYDROGEN peroxide ,CORN ,CORN growth ,ROOT growth ,CONDITIONED response ,PLANT growth ,REACTIVE oxygen species ,CELL aggregation - Abstract
Reactive oxygen species (ROS) can act as signaling molecules involved in the acclimation of plants to various abiotic and biotic stresses. However, it is not clear how the generalized increases in ROS and downstream signaling events that occur in response to stressful conditions are coordinated to modify plant growth and development. Previous studies of maize (Zea mays L.) primary root growth under water deficit stress showed that cell elongation is maintained in the apical region of the growth zone but progressively inhibited further from the apex, and that the rate of cell production is also decreased. It was observed that apoplastic ROS, particularly hydrogen peroxide (H
2 O2 ), increased specifically in the apical region of the growth zone under water stress, resulting at least partly from increased oxalate oxidase activity in this region. To assess the function of the increase in apoplastic H2 O2 in root growth regulation, transgenic maize lines constitutively expressing a wheat oxalate oxidase were utilized in combination with kinematic growth analysis to examine effects of increased apoplastic H2 O2 on the spatial pattern of cell elongation and on cell production in well-watered and water-stressed roots. Effects of H2 O2 removal (via scavenger pretreatment) specifically from the apical region of the growth zone were also assessed. The results show that apoplastic H2 O2 positively modulates cell production and root elongation under well-watered conditions, whereas the normal increase in apoplastic H2 O2 in water-stressed roots is causally related to down-regulation of cell production and root growth inhibition. The effects on cell production were accompanied by changes in spatial profiles of cell elongation and in the length of the growth zone. However, effects on overall cell elongation, as reflected in final cell lengths, were minor. These results reveal a fundamental role of apoplastic H2 O2 in regulating cell production and root elongation in both well-watered and water-stressed conditions. [ABSTRACT FROM AUTHOR]- Published
- 2020
- Full Text
- View/download PDF
7. Higher growth of the apple (Malus × domestica Borkh.) fruit cortex is supported by resource intensive metabolism during early development.
- Author
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Jing, Shan and Malladi, Anish
- Subjects
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APPLES , *APPLE varieties , *FRUIT development , *METABOLISM , *PLANT growth , *CARBON metabolism , *ASPARAGINE - Abstract
Background: The major fleshy tissues of the apple fruit are spatially separable into cortex and pith. These tissues display differential growth during development. Key features of such differential growth, and sink metabolic programs supporting it have not been investigated previously. We hypothesized that differential growth between these fruit tissues is supported by differential sink metabolic programs, particularly during early development. Growth, metabolite concentrations, and transcript abundance of metabolism-related genes were measured to determine characteristics of differential growth and their underlying metabolic programs. Results: The cortex displayed > 5-fold higher growth than the pith during early fruit development, indicating that differential growth was established during this period. Further, when resource availability was increased through sink-removal, cortex growth was preferentially enhanced. Greatest diversity in metabolic programs between these tissues was evident during early fruit development. Higher cortex growth during early development was facilitated by increased catabolism of imported carbon (C) resources, sorbitol and sucrose, and the nitrogen (N) resource, asparagine. It was also associated with enhanced primary C metabolism, and C storage as malate and quinate. The pith metabolic program during this period involved limited allocation of C and N to growth, but greater allocation to storage, and enhanced sucrose-sucrose cycling. Conclusions: Together, these data indicate that the fruit cortex tissue displays a resource intensive metabolic program during early fruit development. This provides the C backbones, proteins, energy and osmolytes to support its higher growth. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
8. Simulating fruit growth and size analysis
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Tijskens, P., Schouten, R., McCormick, R., Unuk, T., Cavaco, A.M., Tijskens, P., Schouten, R., McCormick, R., Unuk, T., and Cavaco, A.M.
- Abstract
Growth of fruit and fruit size is of major importance for growers. Growth in size during cell expansion is well known (adapted van Bertalanffy model) and well applied taking care of the ever-present variation. Explained parts reach well over 98%. What is not very well understood is the increase in number of cells and the associated size increase, just after fruit set. It is (for the time being) just not feasible to measure these small fruit (<5 mm) on an individual level. As a consequence, the von Bertalanffy model does not cover the behaviour right after fruit set. Very rare reports, however, indicate a gradual increase in number of cells, which keep subsequently growing in size during the cell expansion period. A kinetic mechanism is presented that includes both these concurrent processes, however, consisting of six reactions, this model becomes exceedingly complex. Hence, an analytical solution is not available. Simulation using numerical integration with various parameter values will be presented. The general behaviour is as expected, roughly as an asymmetric sigmoidal. As a comparison, the well know Richards’ curve, frequently used to describe growth, is hard to apply as an analysing tool. Moreover, this function has no relation whatsoever with any kinetic mechanism. A new simplified kinetic mechanism that is suitable for data analysis is presented based on conversion of a substrate by an enzyme that increases according to an autocatalytic reaction. The resulting analytical solution can be used to analyse simulated size data, including biological variation. All simulated data on growth size fitted extremely well in the asymmetrical logistic model, with explained parts well over 99%. Behaviour of the growth mechanism, and analysis results of simulated data the developed asymmetrical sigmoidal function will be presented and discussed.
- Published
- 2023
9. Translation of a standardized manufacturing protocol for mesenchymal stromal cells: A systematic comparison of validation and manufacturing data.
- Author
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ROJEWSKI, MARKUS THOMAS, LOTFI, RAMIN, GJERDE, CECILIE, MUSTAFA, KAMAL, VERONESI, ELENA, AHMED, AYMEN B., WIESNETH, MARKUS, KÖRPER, SIXTEN, SENSEBÉ, LUC, LAYROLLE, PIERRE, HELLEM, SØLVE, and SCHREZENMEIER, HUBERT
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STROMAL cells , *LEUCOCYTES , *CURRENT good manufacturing practices , *BONE regeneration , *MOSAICISM , *CELL culture , *MESENCHYMAL stem cells - Abstract
Many data are available on expansion protocols for mesenchymal stromal cells (MSCs) for both experimental settings and manufacturing for clinical trials. However, there is a lack of information on translation of established protocols for Good Manufacturing Practice (GMP) from validation to manufacturing for clinical application. We present the validation and translation of a standardized pre-clinical protocol for isolation and expansion of MSCs for a clinical trial for reconstitution of alveolar bone. Key parameters of 22 large-scale expansions of MSCs from bone marrow (BM) for validation were compared with 11 expansions manufactured for the clinical trial "Jaw bone reconstruction using a combination of autologous mesenchymal stromal cells and biomaterial prior to dental implant placement (MAXILLO1)" aimed at reconstruction of alveolar bone. Despite variations of the starting material, the robust protocol led to stable performance characteristics of expanded MSCs. Manufacturing of the autologous advanced therapy medicinal product MAXILLO-1-MSC was possible, requiring 21 days for each product. Transport of BM aspirates and MSCs within 24 h was guaranteed. MSCs fulfilled quality criteria requested by the national competent authority. In one case, the delivered MSCs developed a mosaic in chromosomal finding, showing no abnormality in differentiation capacity, growth behavior or surface marker expression during long-term culture. The proportion of cells with the mosaic decreased in long-term culture and cells stopped growth after 38.4 population doublings. Clinical use of freshly prepared MSCs, manufactured according to a standardized and validated protocol, is feasible for bone regeneration, even if there was a long local distance between manufacturing center and clinical site. Several parameters, such as colony forming units fibroblasts (CFU-F), percentage of CD34+ cells, cell count of mononuclear cells (MNCs) and white blood cells (WBCs), of the BM may serve as a predictive tool for the yield of MSCs and may help to avoid unnecessary costs for MSC manufacturing due to insufficient cell expansion rates. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
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10. CASE STUDY FOR PLANNING OF CELL PRODUCTION SYSTEM.
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Kremljak, Zvonko
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MANUFACTURING cells , *PRODUCTION engineering , *MANUFACTURING processes , *AUTOMATION , *PRODUCTION scheduling - Abstract
Two key decisions in designing cell production systems are cell formation and layout design problems. In the cell formation problem, machine groups and part families are determined while in the facility layout problem the location of each machine in each cell and the location of each cell are decided. In the paper the configuration model of the cell is presented on the specific data sets of the applied schedule. The model evaluated the project, which was implemented for planning of the production process and the capacities of the local manufacturer of hydraulic equipment. The data were taken into account in 120 parts with 177 operations. Most of these operations were carried out on CNC machining centres and turning centres. Our development model was based on operation due to the lack of formal costs and benefits in the traditional cell production. The results show that the solution with 25 cells was the lowest total cost alternative. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
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11. Designing a Manufacturing Cell System by Assigning Workforce.
- Author
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Ayough, Ashkan and Khorshidvand, Behrouz
- Subjects
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SIMULATED annealing , *MANUFACTURING cells , *PARTICLE swarm optimization , *LABOR supply , *NP-hard problems - Abstract
Purpose: In this paper, we have proposed a new model for designing a Cellular Manufacturing System (CMS) for minimizing the costs regarding a limited number of cells to be formed by assigning workforce. Design/methodology/approach: Pursuing mathematical approach and because the problem is NP-Hard, two meta-heuristic methods of Simulated Annealing (SA) and Particle Swarm Optimization (PSO) algorithms have been used. A small randomly generated test problem with real-world dimensions has been solved using simulated annealing and particle swarm algorithms. Findings: The quality of the two algorithms has been compared. The results showed that PSO algorithm provides more satisfactory solutions than SA algorithm in designing a CMS under uncertainty demands regarding the workforce allocation. Originality/value: In the most of the previous research, cell production has been considered under certainty production or demand conditions, while in practice production and demand are in a dynamic situations and in the real settings, cell production problems require variables and active constraints for each different time periods to achieve better design, so modeling such a problem in dynamic structure leads to more complexity while getting more applicability. The contribution of this paper is providing a new model by considering dynamic production times and uncertainty demands in designing cells. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
12. CAR T Cells in Trials: Recent Achievements and Challenges that Remain in the Production of Modified T Cells for Clinical Applications.
- Author
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Köhl, Ulrike, Arsenieva, Stanislava, Holzinger, Astrid, and Abken, Hinrich
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CHIMERIC antigen receptors , *T cells , *B cells , *LEUKEMIA , *LYMPHOMAS , *DRUG approval , *THERAPEUTICS - Abstract
The adoptive transfer of chimeric antigen receptor (CAR)-modified T cells is attracting growing interest for the treatment of malignant diseases. Early trials with anti-CD19 CAR T cells have achieved spectacular remissions in B-cell leukemia and lymphoma, so far refractory, very recently resulting in the Food and Drug Administration approval of CD19 CAR T cells for therapy. With further applications and increasing numbers of patients, the reproducible manufacture of high-quality clinical-grade CAR T cells is becoming an ever greater challenge. New processing techniques, quality-control mechanisms, and logistic developments are required to meet both medical needs and regulatory restrictions. This paper summarizes the state-of-the-art in manufacturing CAR T cells and the current challenges that need to be overcome to implement this type of cell therapy in the treatment of a variety of malignant diseases and in a greater number of patients. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
13. Virus Dynamics Are Influenced by Season, Tides and Advective Transport in Intertidal, Permeable Sediments
- Author
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Verona Vandieken, Lara Sabelhaus, and Tim Engelhardt
- Subjects
virus production ,cell production ,intertidal sands ,advection ,oxygen consumption ,flow-through reactors ,Microbiology ,QR1-502 - Abstract
Sandy surface sediments of tidal flats exhibit high microbial activity due to the fast and deep-reaching transport of oxygen and nutrients by porewater advection. On the other hand during low tide, limited transport results in nutrient and oxygen depletion concomitant to the accumulation of microbial metabolites. This study represents the first attempt to use flow-through reactors to investigate virus production, virus transport and the impact of tides and season in permeable sediments. The reactors were filled with intertidal sands of two sites (North beach site and backbarrier sand flat of Spiekeroog island in the German Wadden Sea) to best simulate advective porewater transport through the sediments. Virus and cell release along with oxygen consumption were measured in the effluents of reactors during continuous flow of water through the sediments as well as in tidal simulation experiments where alternating cycles with and without water flow (each for 6 h) were operated. The results showed net rates of virus production (0.3–13.2 × 106 viruses cm−3 h−1) and prokaryotic cell production (0.3–10.0 × 105 cells cm−3 h−1) as well as oxygen consumption rates (56–737 μmol l−1 h−1) to be linearly correlated reflecting differences in activity, season and location of the sediments. Calculations show that total virus turnover was fast with 2 to 4 days, whereas virus-mediated cell turnover was calculated to range between 5–13 or 33–91 days depending on the assumed burst sizes (number of viruses released upon cell lysis) of 14 or 100 viruses, respectively. During the experiments, the homogenized sediments in the reactors became vertically structured with decreasing microbial activities and increasing impact of viruses on prokaryotic mortality with depth. Tidal simulation clearly showed a strong accumulation of viruses and cells in the top sections of the reactors when the flow was halted indicating a consistently high virus production during low tide. In conclusion, cell lysis products due to virus production may fuel microbial communities in the absence of advection-driven nutrient input, but are eventually washed off the surface sediment during high tide and being transported into deeper sediment layers or into the water column together with the produced viruses.
- Published
- 2017
- Full Text
- View/download PDF
14. Toward a Li‐Ion Battery Ontology Covering Production and Material Structure
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Marcel Mutz, Milena Perovic, Philip Gümbel, Veit Steinbauer, Andriy Taranovskyy, Yunjie Li, Lisa Beran, Tobias Käfer, Klaus Dröder, Volker Knoblauch, Arno Kwade, Volker Presser, Dirk Werth, and Tobias Kraus
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battery research ,data structures ,taxonomy ,General Energy ,electrode production ,Economics ,ddc:330 ,cell production ,ontology ,battery production - Abstract
An ontology for the structured storage, retrieval, and analysis of data on lithium-ion battery materials and electrode-to-cell production is presented. It provides a logical structure that is mapped onto a digital architecture and used to visualize, correlate, and make predictions in battery production, research, and development. Materials and processes are specified using a predetermined terminology; a chain of unit processes (steps) connects raw materials and products (items) of battery cell production. The ontology enables the attachment of analytical methods (characterization methods) to items. Workshops and interviews with experts in battery materials and production processes are conducted to ensure that the structure is conformable both for industrial-scale and laboratory-scale data generation and implementation. Raw materials and intermediate products are identified and defined for all steps to the final battery cell. Steps and items are defined based on current standard materials and process chains using terms that are in common use. Alternative structures and the connection of the ontology to other existing ontologies are discussed. The contribution provides a pragmatic, accessible way to unify the storage of materials-oriented lithium-ion battery production data. It aids the linkage of such data with domain knowledge and the automation of data analysis in production and research.
- Published
- 2022
- Full Text
- View/download PDF
15. Simulacija prehoda iz delavniške v celično proizvodnjo
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Kotnik, Benjamin and Kušar, Janez
- Subjects
information flow ,udc:658.5.018.2:005.52(043.2) ,delavniška proizvodnja ,cell production ,internal transport ,material flow ,simulation ,simulacija ,materialni tok ,celična proizvodnja ,workshop production ,informacijski tok ,notranji transport - Abstract
Vodstvo podjetja se je zaradi velikega porasta naročil odločilo za postopno razširitev proizvodnih kapacitet. V prvi fazi se bo zgradil nov objekt, ki je lokacijsko umeščen na mesto, kjer je bilo do sedaj medfazno skladišče, to pa se bo premestilo na skrajni konec podjetja. V ta namen smo v okviru magistrskega dela popisali obstoječe stanje s pomočjo simulacijskega modela in ga primerjali s stanjem po premestitvi. Ugotovili smo, da premestitev podaljša transportno pot in ne vpliva na produktivnost proizvodnje. Model obstoječe proizvodnje smo preoblikovali iz delavniške v celično razmestitev in na osnovi simulacijskih rezultatov izračunali ekonomsko upravičenost. Due to the large increase in orders, the company's management decided to gradually expand production capacity. In the first phase, a new facility will be built, which is located in the place where the interphase warehouse was until now, and it will be moved to the far end of the company. For this purpose, as part of the master's thesis, we described the existing situation with the help of a simulation model and compared it with the situation after relocation. We found out that the relocation lengthens of the transportation route does not affect the production productivity. We converted the existing production model from a workshop to a cell deployment and calculated the economic justification based on the simulation results.
- Published
- 2022
16. Virus Dynamics Are Influenced by Season, Tides and Advective Transport in Intertidal, Permeable Sediments.
- Author
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Vandieken, Verona, Sabelhaus, Lara, and Engelhardt, Tim
- Subjects
ADVECTION ,OXYGEN consumption ,SEDIMENTS ,MICROBIAL metabolism ,MICROBIAL physiology - Abstract
Sandy surface sediments of tidal flats exhibit high microbial activity due to the fast and deep-reaching transport of oxygen and nutrients by porewater advection. On the other hand during low tide, limited transport results in nutrient and oxygen depletion concomitant to the accumulation of microbial metabolites. This study represents the first attempt to use flow-through reactors to investigate virus production, virus transport and the impact of tides and season in permeable sediments. The reactors were filled with intertidal sands of two sites (North beach site and backbarrier sand flat of Spiekeroog island in the German Wadden Sea) to best simulate advective porewater transport through the sediments. Virus and cell release along with oxygen consumption were measured in the effluents of reactors during continuous flow of water through the sediments as well as in tidal simulation experiments where alternating cycles with and without water flow (each for 6 h) were operated. The results showed net rates of virus production (0.3-13.2 × 10
6 viruses cm-3 h-1 ) and prokaryotic cell production (0.3-10.0 × 105 cells cm-3 h-1 ) as well as oxygen consumption rates (56-737 µmol l-1 h-1 ) to be linearly correlated reflecting differences in activity, season and location of the sediments. Calculations show that total virus turnover was fast with 2 to 4 days, whereas virus-mediated cell turnover was calculated to range between 5-13 or 33-91 days depending on the assumed burst sizes (number of viruses released upon cell lysis) of 14 or 100 viruses, respectively. During the experiments, the homogenized sediments in the reactors became vertically structured with decreasing microbial activities and increasing impact of viruses on prokaryotic mortality with depth. Tidal simulation clearly showed a strong accumulation of viruses and cells in the top sections of the reactors when the flow was halted indicating a consistently high virus production during low tide. In conclusion, cell lysis products due to virus production may fuel microbial communities in the absence of advection-driven nutrient input, but are eventually washed off the surface sediment during high tide and being transported into deeper sediment layers or into the water column together with the produced viruses. [ABSTRACT FROM AUTHOR]- Published
- 2017
- Full Text
- View/download PDF
17. Automation of cell production system for cellular phones using dual-arm robots.
- Author
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Do, Hyun, Choi, Tae-Yong, and Kyung, Jin
- Subjects
- *
ROBOT design & construction , *AUTOMATION , *CELL phones , *ROBOT control systems , *MANUFACTURING processes , *ECONOMIC demand - Abstract
The demands placed on automation of cell production processes for IT products are becoming increasingly sophisticated. Dual-arm robots are drawing particular attention as a process solution because they offer flexibility and can work in a similar manner to a human operator. In this paper, we propose an automation system for cellular phone packing processes that uses two dual-arm robots. The applied robots are designed with specifications that meet the requirements of the cellular phone packing tasks. In addition, a robotic cell production system is proposed that applies a task allocation method to perform an efficient packing job for cellular phones. In particular, each task is assigned with the intention of reducing the takt time , which is the time taken to finish a single product in the production line and to avoid collisions between the two robots. Finally, we implement some of our results in a demonstration of a packing job that involves filling five unit boxes with seven kinds of accessories. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
18. Increase of Cycling Stability in Pilot-Scale 21700 Format Li-Ion Cells by Foil Tab Design
- Author
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Daniel Brändle, Rares-George Scurtu, Margret Wohlfahrt-Mehrens, and Thomas A. Waldmann
- Subjects
Materials science ,Process Chemistry and Technology ,Chemical technology ,tab design ,Bioengineering ,lithium-ion battery ,TP1-1185 ,Lithium-ion battery ,Cathode ,21700 format ,Anode ,law.invention ,Chemistry ,Electrical resistance and conductance ,law ,Electrode ,Chemical Engineering (miscellaneous) ,cell production ,Graphite ,Composite material ,cell design ,QD1-999 ,FOIL method ,Separator (electricity) - Abstract
Li-ion cells of the industrially-relevant 21700 format were built on pilot-scale with tabs made from (a) the electrodes’ current collecting foils (Al and Cu, “foil tabs”) in comparison with (b) conventional tabs (Al and Ni) welded to the electrodes’ current collecting foils (“welded tabs”). Both cell types use the same anode (graphite), cathode (NMC622), separator, electrolyte, as well as the same tab positions. This allows a direct comparison of welded tabs and foil tabs regarding formation, C-rate capability, cell electrical resistance, and long-term cycling stability tests. Our data reproducibly shows 14.4% longer cycling stability and 11.2% increased total charge throughput in the case of the cells with foil tabs until 80% SOH, which is likely due to less inhomogeneities in the case of the foil tab design.
- Published
- 2021
19. Translation of a standardized manufacturing protocol for mesenchymal stromal cells: A systematic comparison of validation and manufacturing data
- Author
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Hubert Schrezenmeier, Sølve Hellem, Pierre Layrolle, Cecilie Gudveig Gjerde, Ramin Lotfi, M Wiesneth, Aymen Bushra Ahmed, Markus Rojewski, Sixten Körper, Kamal Mustafa, Luc Sensebé, and Elena Veronesi
- Subjects
Male ,0301 basic medicine ,Oncology ,Cancer Research ,Cell Culture Techniques ,CD34 ,Cell Count ,Translational Research, Biomedical ,translational medicine ,0302 clinical medicine ,Immunology and Allergy ,Cells, Cultured ,Genetics (clinical) ,Aged, 80 and over ,Colony-forming unit ,education.field_of_study ,advanced therapy medicinal products ,Cell Differentiation ,karyotyping ,Middle Aged ,Reference Standards ,Tissue Donors ,3. Good health ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Female ,mesenchymal stromal cells ,Adult ,medicine.medical_specialty ,Adolescent ,Cell Survival ,Immunology ,Population ,Bone Marrow Cells ,Good Manufacturing Practice ,Young Adult ,03 medical and health sciences ,Internal medicine ,medicine ,cell production ,Humans ,quality control ,Bone regeneration ,education ,Dental alveolus ,Aged ,Cell Proliferation ,Transplantation ,business.industry ,Mesenchymal stem cell ,Mesenchymal Stem Cells ,Cell Biology ,Clinical trial ,030104 developmental biology ,Karyotyping ,Bone marrow ,business - Abstract
Background Many data are available on expansion protocols for mesenchymal stromal cells (MSCs) for both experimental settings and manufacturing for clinical trials. However, there is a lack of information on translation of established protocols for Good Manufacturing Practice (GMP) from validation to manufacturing for clinical application. We present the validation and translation of a standardized pre-clinical protocol for isolation and expansion of MSCs for a clinical trial for reconstitution of alveolar bone. Methods Key parameters of 22 large-scale expansions of MSCs from bone marrow (BM) for validation were compared with 11 expansions manufactured for the clinical trial “Jaw bone reconstruction using a combination of autologous mesenchymal stromal cells and biomaterial prior to dental implant placement (MAXILLO1)” aimed at reconstruction of alveolar bone. Results Despite variations of the starting material, the robust protocol led to stable performance characteristics of expanded MSCs. Manufacturing of the autologous advanced therapy medicinal product MAXILLO-1-MSC was possible, requiring 21 days for each product. Transport of BM aspirates and MSCs within 24 h was guaranteed. MSCs fulfilled quality criteria requested by the national competent authority. In one case, the delivered MSCs developed a mosaic in chromosomal finding, showing no abnormality in differentiation capacity, growth behavior or surface marker expression during long-term culture. The proportion of cells with the mosaic decreased in long-term culture and cells stopped growth after 38.4 population doublings. Conclusions Clinical use of freshly prepared MSCs, manufactured according to a standardized and validated protocol, is feasible for bone regeneration, even if there was a long local distance between manufacturing center and clinical site. Several parameters, such as colony forming units fibroblasts (CFU-F), percentage of CD34+ cells, cell count of mononuclear cells (MNCs) and white blood cells (WBCs), of the BM may serve as a predictive tool for the yield of MSCs and may help to avoid unnecessary costs for MSC manufacturing due to insufficient cell expansion rates.
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- 2019
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20. Fully Automated Cultivation of Adipose-Derived Stem Cells in the StemCellDiscovery - A Robotic Laboratory for Small-Scale, High-Throughput Cell Production Including Deep Learning-Based Confluence Estimation
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Laura Herbst, Robert Schmitt, Bastian Nießing, Frederik Erkens, Niels König, Jelena Ochs, Ferdinand Biermann, Tobias Piotrowski, and Publica
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0301 basic medicine ,Computer science ,Distributed computing ,Bioengineering ,Image processing ,lcsh:Chemical technology ,computer.software_genre ,lcsh:Chemistry ,03 medical and health sciences ,0302 clinical medicine ,ddc:570 ,Chemical Engineering (miscellaneous) ,cell production ,lcsh:TP1-1185 ,Throughput (business) ,Laboratory automation ,confluence estimation ,mesenchymal stem cells ,Cost efficiency ,business.industry ,Process Chemistry and Technology ,Scale (chemistry) ,Deep learning ,deep learning ,Automation ,Simulation software ,030104 developmental biology ,lcsh:QD1-999 ,Artificial intelligence ,business ,computer ,030217 neurology & neurosurgery - Abstract
Processes : open access journal 9(4), 575 (2021). doi:10.3390/pr9040575 special issue: "Special Issue "Cell, Gene and Regenerative Therapy Processes" / Special Issue Editors: Dr. Qasim Rafiq, Guest Editor; Dr. Ioannis Papantoniou, Guest Editor; Ms. Jelena Ochs, Guest Editor", Published by MDPI, Basel
- Published
- 2021
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21. A Quantitative Analysis of Cellular Manufacturing in Apparel Industry by Using Simulation.
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Guoqiang Pan
- Subjects
- *
QUANTITATIVE chemical analysis , *QUANTITATIVE research , *MANUFACTURING cells , *MANUFACTURING processes , *CLOTHING industry - Abstract
Purpose: This research, by using the SIMIO simulation platform, provides a quantitative and comparative analysis of how the efficiency of four different cell production modes is affected. It is hoped that the results will be of some help for garment factories to optimize their production lines. Design/methodology/approach: The SIMIO simulation platform was employed in the research and comparisons were made of the simulation test results about the four popular cellular manufacturing modes. Findings: The operation mode, number of operators, and number of buffer areas are key factors affecting the production line efficiency, and need to be reasonably set to achieve the highest efficiency. Originality/value: As most research literature so far is qualitative, this research provided a simulation-based quantitative analysis of the production efficiency under different cell production modes. [ABSTRACT FROM AUTHOR]
- Published
- 2014
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22. Prediction of Human Induced Pluripotent Stem Cell Cardiac Differentiation Outcome by Multifactorial Process Modeling
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Samira Mohammadi, Wiebke Löbel, Elizabeth A. Lipke, Felix Manstein, Katharina Ritzenhoff, Caroline Halloin, Robert Zweigerdt, Mohammadjafar Hashemi, Selen Cremaschi, Ferdous Finklea, and Bianca Williams
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0301 basic medicine ,Feature engineering ,Histology ,Process modeling ,Process (engineering) ,Computer science ,lcsh:Biotechnology ,Biomedical Engineering ,Bioengineering ,Feature selection ,cardiomyocytes ,02 engineering and technology ,bioreactor ,03 medical and health sciences ,Directed differentiation ,feature selection ,lcsh:TP248.13-248.65 ,cell production ,Induced pluripotent stem cell ,Original Research ,directed differentiation ,Bioengineering and Biotechnology ,Experimental data ,021001 nanoscience & nanotechnology ,Random forest ,human induced pluripotent stem cells ,030104 developmental biology ,machine learning ,classification ,0210 nano-technology ,Biological system ,Biotechnology - Abstract
Human cardiomyocytes (CMs) have potential for use in therapeutic cell therapy and high-throughput drug screening. Because of the inability to expand adult CMs, their large-scale production from human pluripotent stem cells (hPSC) has been suggested. Significant improvements have been made in understanding directed differentiation processes of CMs from hPSCs and their suspension culture-based production at chemically defined conditions. However, optimization experiments are costly, time-consuming, and highly variable, leading to challenges in developing reliable and consistent protocols for the generation of large CM numbers at high purity. This study examined the ability of data-driven modeling with machine learning for identifying key experimental conditions and predicting final CM content using data collected during hPSC-cardiac differentiation in advanced stirred tank bioreactors (STBRs). Through feature selection, we identified process conditions, features, and patterns that are the most influential on and predictive of the CM content at the process endpoint, on differentiation day 10 (dd10). Process-related features were extracted from experimental data collected from 58 differentiation experiments by feature engineering. These features included data continuously collected online by the bioreactor system, such as dissolved oxygen concentration and pH patterns, as well as offline determined data, including the cell density, cell aggregate size, and nutrient concentrations. The selected features were used as inputs to construct models to classify the resulting CM content as being “sufficient” or “insufficient” regarding pre-defined thresholds. The models built using random forests and Gaussian process modeling predicted insufficient CM content for a differentiation process with 90% accuracy and precision on dd7 of the protocol and with 85% accuracy and 82% precision at a substantially earlier stage: dd5. These models provide insight into potential key factors affecting hPSC cardiac differentiation to aid in selecting future experimental conditions and can predict the final CM content at earlier process timepoints, providing cost and time savings. This study suggests that data-driven models and machine learning techniques can be employed using existing data for understanding and improving production of a specific cell type, which is potentially applicable to other lineages and critical for realization of their therapeutic applications.
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- 2020
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23. A meta-analysis of cambium phenology and growth: linear and non-linear patterns in conifers of the northern hemisphere.
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Rossi, Sergio, Anfodillo, Tommaso, Čufar, Katarina, Cuny, Henri E., Deslauriers, Annie, Fonti, Patrick, Frank, David, Gričar, Jožica, Gruber, Andreas, King, Gregory M., Krause, Cornelia, Morin, Hubert, Oberhuber, Walter, Prislan, Peter, and Rathgeber, Cyrille B. K.
- Subjects
- *
META-analysis , *CAMBIUM , *CONIFERS , *PLANT phenology , *XYLEM - Abstract
Background and Aims Ongoing global warming has been implicated in shifting phenological patterns such as the timing and duration of the growing season across a wide variety of ecosystems. Linear models are routinely used to extrapolate these observed shifts in phenology into the future and to estimate changes in associated ecosystem properties such as net primary productivity. Yet, in nature, linear relationships may be special cases. Biological processes frequently follow more complex, non-linear patterns according to limiting factors that generate shifts and discontinuities, or contain thresholds beyond which responses change abruptly. This study investigates to what extent cambium phenology is associated with xylem growth and differentiation across conifer species of the northern hemisphere. Methods Xylem cell production is compared with the periods of cambial activity and cell differentiation assessed on a weekly time scale on histological sections of cambium and wood tissue collected from the stems of nine species in Canada and Europe over 1–9 years per site from 1998 to 2011. Key Results The dynamics of xylogenesis were surprisingly homogeneous among conifer species, although dispersions from the average were obviously observed. Within the range analysed, the relationships between the phenological timings were linear, with several slopes showing values close to or not statistically different from 1. The relationships between the phenological timings and cell production were distinctly non-linear, and involved an exponential pattern Conclusions The trees adjust their phenological timings according to linear patterns. Thus, shifts of one phenological phase are associated with synchronous and comparable shifts of the successive phases. However, small increases in the duration of xylogenesis could correspond to a substantial increase in cell production. The findings suggest that the length of the growing season and the resulting amount of growth could respond differently to changes in environmental conditions. [ABSTRACT FROM AUTHOR]
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- 2013
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24. Causes and correlations in cambium phenology: towards an integrated framework of xylogenesis.
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Rossi, Sergio, Morin, Hubert, and Deslauriers, Annie
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- *
PLANT phenology , *VASCULAR system of plants , *PLANT cells & tissues , *PLANT growth , *PLANT cell differentiation - Abstract
Although habitually considered as a whole, xylogenesis is a complex process of division and maturation of a pool of cells where the relationship between the phenological phases generating such a growth pattern remains essentially unknown. This study investigated the causal relationships in cambium phenology of black spruce [Picea mariana (Mill.) BSP] monitored for 8 years on four sites of the boreal forest of Quebec, Canada. The dependency links connecting the timing of xylem cell differentiation and cell production were defined and the resulting causal model was analysed with d-sep tests and generalized mixed models with repeated measurements, and tested with Fisher’s C statistics to determine whether and how causality propagates through the measured variables. The higher correlations were observed between the dates of emergence of the first developing cells and between the ending of the differentiation phases, while the number of cells was significantly correlated with all phenological phases. The model with eight dependency links was statistically valid for explaining the causes and correlations between the dynamics of cambium phenology. Causal modelling suggested that the phenological phases involved in xylogenesis are closely interconnected by complex relationships of cause and effect, with the onset of cell differentiation being the main factor directly or indirectly triggering all successive phases of xylem maturation. [ABSTRACT FROM PUBLISHER]
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- 2012
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25. A Band Model of Cambium Development: Opportunities and Prospects
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Eugene A. Vaganov, Ivan Tychkov, Vladimir V. Shishov, Grigory K. Zelenov, and Kevin J. Anchukaitis
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tree-ring width ,Xylem ,Forestry ,individual tree ,Radiative forcing ,simulation ,Explained variation ,Atmospheric sciences ,Tree (graph theory) ,Carbon cycle ,cambium activity ,cell production ,Environmental science ,Cell structure ,cambium band ,common climate signal ,QK900-989 ,Cambium ,Plant ecology - Abstract
More than 60% of tree phytomass is concentrated in stem wood, which is the result of periodic activity of the cambium. Nevertheless, there are few attempts to quantitatively describe cambium dynamics. In this study, we develop a state-of-the-art band model of cambium development, based on the kinetic heterogeneity of the cambial zone and the connectivity of the cell structure. The model describes seasonal cambium development based on an exponential function under climate forcing which can be effectively used to estimate the seasonal cell production for individual trees. It was shown that the model is able to simulate different cell production for fast-, middle- and slow-growing trees under the same climate forcing. Based on actual measurements of cell production for two contrasted trees, the model effectively reconstructed long-term cell production variability (up to 75% of explained variance) of both tree-ring characteristics over the period 1937−2012. The new model significantly simplifies the assessment of seasonal cell production for individual trees of a studied forest stand and allows the entire range of individual absolute variability in the ring formation of any tree in the stand to be quantified, which can lead to a better understanding of the anatomy of xylem formation, a key component of the carbon cycle.
- Published
- 2021
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26. Cambial phenology, wood formation and temperature thresholds in two contrasting years at high altitude in southern Italy.
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DESLAURIERS, ANNIE, ROSSI, SERGIO, ANFODILLO, TOMMASO, and SARACINO, ANTONIO
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- *
PHENOLOGY , *BIOCLIMATOLOGY , *PLANT phenology , *PINE - Abstract
Xylogenesis was monitored during 2003 and 2004 in a timberline environment in southern Italy to assess links between temperature, cambial phenology and wood formation on a short-time scale. Wood microcores were collected weekly from May to October from 10 trees of Pinus leucodermis Ant., histological sections were cut with a rotary microtome and anatomical features of the developing and mature tracheids were observed and measured along the growing tree ring. Spring 2003 was hotter than spring 2004, with temperatures up to 2.6 °C above historical means. The hotter conditions resulted in an earlier onset of cambial activity and all differentiation phases of about 20 days, resulting in an increased duration of xylogenesis of about 23 days. Air and stem temperatures at which xylogenesis had a 0.5 probability of being active were calculated with logistic regressions fitted on binary responses. In both years, similar thresholds were estimated with daily mean values of 8.2 and 9.5 °C for air and stem temperatures, respectively. The observed convergent responses of cambium phenology to temperature during the two contrasting springs confirm the key role of this environmental factor in determining the onset and duration of wood formation in timberline areas. The intra-annual dynamics of ring-width increase differed between years, with significantly narrower rings formed in 2004 than in 2003. These differences were mainly related to cell size because larger earlywood tracheids were produced in 2003. This study demonstrates the plasticity of tree-ring formation in response to high temperatures as a result of modifications in the onset and duration of differentiation. [ABSTRACT FROM PUBLISHER]
- Published
- 2008
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27. Spatial and Temporal Quantitative Analysis of Cell Division and Elongation Rate in Growing Wheat Leaves under Saline Conditions.
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Hu, Yuncai and Schmidhalter, Urs
- Subjects
- *
CONTACT inhibition , *SOIL salinity , *PLANT growth , *CELL proliferation , *BOTANY study & teaching , *QUANTITATIVE research - Abstract
Leaf growth in grasses is determined by the cell division and elongation rates, with the duration of cell elongation being one of the processes that is the most sensitive to salinity. Our objective was to investigate the distribution profiles of cell production, cell length and the duration of cell elongation in the growing zone of the wheat leaf during the steady growth phase. Plants were grown in loamy soil with or without 120 mmol/L NaCl in a growth chamber, and harvested at day 3 after leaf 4 emerged. Results show that the elongation rate of leaf 4 was reduced by 120 mmol/L NaCl during the steady growth phase. The distribution profile of the lengths of abaxial epidermal cells of leaf 4 during the steady growth stage shows a sigmoidal pattern along the leaf axis for both treatments. Although salinity did not affect or even increased the length of the epidermal cells in some locations in the growth zone compared to the control treatment, the final length of the epidermal cells was reduced by 14% at 120 mmol/L NaCl. Thus, we concluded that the observed reduction in the leaf elongation rate derived in part from the reduced cell division rate and either the shortened cell elongation zone or shortened duration of cell elongation. This suggests that more attention should be paid to the effects of salinity on those properties of cell production and the period of cell maturation that are related to the properties of cell wall. [ABSTRACT FROM AUTHOR]
- Published
- 2008
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28. Response of Cassava Leaf Area Expansion to Water Deficit: Cell Proliferation, Cell Expansion and Delayed Development.
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ALVES, ALFREDO A. C. and SETTER, TIM L.
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CASSAVA ,PLANT growth ,CELL proliferation ,PLANT cells & tissues ,CELL division ,PLANT development - Abstract
• Background and Aims Cassava (Manihot esculenta) is an important food crop in the tropics that has a high growth rate in optimal conditions, but also performs well in drought-prone climates. The objectives of this work were to determine the effects of water deficit and rewatering on the rate of expansion of leaves at different developmental stages and to evaluate the extent to which decreases in cell proliferation, expansion, and delay in development are responsible for reduced growth.• Methods Glasshouse-grown cassava plants were subjected to 8 d of water deficit followed by rewatering. Leaves at 15 developmental stages from nearly full size to meristematic were sampled, and epidermal cell size and number were measured on leaves at four developmental stages.• Key Results Leaf expansion and development were nearly halted during stress but resumed vigorously after rewatering. In advanced-stage leaves (Group 1) in which development was solely by cell expansion, expansion resumed after rewatering, but not sufficiently for cell size to equal that of controls at maturity. In Group 2 (cell proliferation), relative expansion rate and cell proliferation were delayed until rewatering, but then recovered partially, so that loss of leaf area was due to decreased cell numbers per leaf. In Group 3 (early meristematic development) final leaf area was not affected by stress, but development was delayed by 4–6 d. On a plant basis, the proportion of loss of leaf area over 26 d attributed to leaves at each developmental stage was 29, 50 and 21 % in Group 1, 2 and 3, respectively.• Conclusions Although cell growth processes were sensitive to mild water deficit, they recovered to a large extent, and much of the reduction in leaf area was caused by developmental delay and a reduction in cell division in the youngest, meristematic leaves. [ABSTRACT FROM AUTHOR]
- Published
- 2004
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29. Root cap structure and cell production rates of maize (Zea mays ) roots in compacted sand.
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Iijima, Morio, Barlow, Peter W., and Bengough, A. Glyn
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- *
MECHANICAL impedance , *CORN seedlings , *PLANT roots - Abstract
Summary • To assess the influence of mechanical impedance on cell fluxes in the root cap, maize (Zea mays ) seedlings were grown in either loose or compacted sand with penetration resistances of 0.2 MPa and 3.8 MPa, respectively. Numbers of cap cells were estimated using image analysis, and cell doubling times using the colchicine technique. • There were 5930 cells in the caps in the compact and 6900 cells in the loose control after 24 h growth in sand. Cell production rates were 2010 cells d[sup -1] in compact and 1570 cells d[sup -1] in loose sand. • These numbers represent accumulations of 4960 and 3540 detached cells d[sup -1] around the cap periphery following the two types of treatment. The total number of detached cells was estimated as sufficient to completely cover the whole root cap in the compact sand, but only 11% of the root cap in the loose sand. • In conclusion, mechanical impedance slightly enhanced meristematic activities in the lateral region of the root cap. The release of extra border cells would aid root penetration into the compact sand. [ABSTRACT FROM AUTHOR]
- Published
- 2003
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30. Higher growth of the apple (Malus × domestica Borkh.) fruit cortex is supported by resource intensive metabolism during early development
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Shan Jing and Anish Malladi
- Subjects
Malus ,Sucrose ,Fruit growth and development ,Metabolite ,Cell production ,Plant Science ,Biology ,Genes, Plant ,chemistry.chemical_compound ,Sink activity ,lcsh:Botany ,Metabolic profiling ,Asparagine ,Nitrogen metabolism ,Plant Proteins ,Catabolism ,Carbon metabolism ,Metabolism ,biology.organism_classification ,lcsh:QK1-989 ,Fruit load reduction ,Horticulture ,chemistry ,Osmolyte ,Fruit ,Pith ,Research Article - Abstract
BackgroundThe major fleshy tissues of the apple fruit are spatially separable into cortex and pith. These tissues display differential growth during development. Key features of such differential growth, and sink metabolic programs supporting it have not been investigated previously. We hypothesized that differential growth between these fruit tissues is supported by differential sink metabolic programs, particularly during early development. Growth, metabolite concentrations, and transcript abundance of metabolism-related genes were measured to determine characteristics of differential growth and their underlying metabolic programs.ResultsThe cortex displayed > 5-fold higher growth than the pith during early fruit development, indicating that differential growth was established during this period. Further, when resource availability was increased through sink-removal, cortex growth was preferentially enhanced. Greatest diversity in metabolic programs between these tissues was evident during early fruit development. Higher cortex growth during early development was facilitated by increased catabolism of imported carbon (C) resources, sorbitol and sucrose, and the nitrogen (N) resource, asparagine. It was also associated with enhanced primary C metabolism, and C storage as malate and quinate. The pith metabolic program during this period involved limited allocation of C and N to growth, but greater allocation to storage, and enhanced sucrose-sucrose cycling.ConclusionsTogether, these data indicate that the fruit cortex tissue displays a resource intensive metabolic program during early fruit development. This provides the C backbones, proteins, energy and osmolytes to support its higher growth.
- Published
- 2019
31. Investigation of the Mechanical Behavior of Electrodes after Calendering and Its Influence on Singulation and Cell Performance.
- Author
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Mayer, Dominik, Wurba, Ann-Kathrin, Bold, Benjamin, Bernecker, Jonathan, Smith, Anna, and Fleischer, Jürgen
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ELECTRIC batteries ,ELECTRODES ,MANUFACTURING processes ,GEOMETRIC shapes ,COMPACTING - Abstract
Battery cell production is a complex process chain with interlinked manufacturing processes. Calendering in particular has an enormous influence on the subsequent manufacturing steps and final cell performance. However, the effects on the mechanical properties of the electrode, in particular, have been insufficiently investigated. For this reason, the impact of different densification rates during calendering on the electrochemical cell performance of NMC811 (LiNi
0.8 Mn0.1 Co0.1 O2 ) half-cells are investigated to identify the relevant calendering parameters. Based on this investigation, an experimental design has been derived. Electrode elongations after calendering in and orthogonal to the running direction of the NMC811 cathode are investigated in comparison with a hard carbon anode after calendering. Elongations orthogonal to the machine direction are observed to have no major dependencies on the compaction rate during calendering. In the machine direction, however, significant elongation occurs as a dependency of the compaction rate for both the hard carbon anode and the NMC811. In addition, the geometric shape of the NMC811 electrodes after separation into individual sheets is investigated with regard to different compaction rates during calendering. It is shown that the corrugations that occur during calendering are propagated into the single electrode, depending on the compaction rate. [ABSTRACT FROM AUTHOR]- Published
- 2021
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32. Increase of Cycling Stability in Pilot-Scale 21700 Format Li-Ion Cells by Foil Tab Design.
- Author
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Waldmann, Thomas, Scurtu, Rares-George, Brändle, Daniel, and Wohlfahrt-Mehrens, Margret
- Subjects
ALUMINUM-lithium alloys ,CATHODES ,ELECTRODES - Abstract
Li-ion cells of the industrially-relevant 21700 format were built on pilot-scale with tabs made from (a) the electrodes' current collecting foils (Al and Cu, "foil tabs") in comparison with (b) conventional tabs (Al and Ni) welded to the electrodes' current collecting foils ("welded tabs"). Both cell types use the same anode (graphite), cathode (NMC622), separator, electrolyte, as well as the same tab positions. This allows a direct comparison of welded tabs and foil tabs regarding formation, C-rate capability, cell electrical resistance, and long-term cycling stability tests. Our data reproducibly shows 14.4% longer cycling stability and 11.2% increased total charge throughput in the case of the cells with foil tabs until 80% SOH, which is likely due to less inhomogeneities in the case of the foil tab design. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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33. Development, functional characterization and validation of methodology for GMP-compliant manufacture of phagocytic macrophages: A novel cellular therapeutic for liver cirrhosis
- Author
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Anne P.M. Atkinson, Benjamin J. Dwyer, Neil W. A. McGowan, Laura Bailey, Audrey Laurie, Paul Burgoyne, Stuart J. Forbes, John D. M. Campbell, Joanna Moore, Chloe Pass, Marc Turner, Alasdair R. Fraser, and Akib Hamid
- Subjects
0301 basic medicine ,Liver Cirrhosis ,Cancer Research ,Cell Transplantation ,Receptors, CCR2 ,medicine.medical_treatment ,CD14 ,Immunology ,Cell ,Cell Culture Techniques ,Lipopolysaccharide Receptors ,Inflammation ,Receptors, Cell Surface ,macrophage ,Cell Separation ,Monocytes ,Cell therapy ,03 medical and health sciences ,Phagocytosis ,Journal Article ,medicine ,Immunology and Allergy ,Macrophage ,Humans ,Lectins, C-Type ,Genetics (clinical) ,process validation ,Transplantation ,business.industry ,cirrhosis ,GMP ,Macrophages ,Cell Biology ,Cell sorting ,030104 developmental biology ,medicine.anatomical_structure ,Cytokine ,Mannose-Binding Lectins ,Oncology ,Cell culture ,Cell Production ,Cytokines ,Female ,medicine.symptom ,cell therapy ,business ,Biomarkers ,Mannose Receptor - Abstract
BACKGROUND AIMS: Autologous macrophage therapy represents a potentially significant therapeutic advance for the treatment of severe progressive liver cirrhosis. Administration of macrophages has been shown to reduce inflammation and drive fibrotic scar breakdown and tissue repair in relevant models. This therapeutic approach is being assessed for safety and feasibility in a first-in-human trial (MAcrophages Therapy for liver CirrHosis [MATCH] trial).METHODS: We outline the development and validation phases of GMP production. This includes use of the CliniMACS Prodigy cell sorting system to isolate CD14(+) cells; optimizing macrophage culture conditions, assessing cellular identity, product purity, functional capability and determining the stability of the final cell product.RESULTS: The GMP-compliant macrophage products have a high level of purity and viability, and have a consistent phenotypic profile, expressing high levels of mature macrophage markers 25F9 and CD206 and low levels of CCR2. The macrophages demonstrate effective phagocytic capacity, are constitutively oriented to an anti-inflammatory profile and remain responsive to cytokine and TLR stimulation. The process validation shows that the cell product in excipient is remarkably robust, consistently passing the viability and phenotypic release criteria up to 48 hours after harvest.CONCLUSIONS: This is the first report of validation of a large-scale, fully Good Manufacturing Practice-compliant, autologous macrophage cell therapy product for the potential treatment of cirrhosis. Phenotypic and functional assays confirm that these cells remain functionally viable for up to 48 h, allowing significant flexibility in administration to patients.
- Published
- 2017
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34. A Band Model of Cambium Development: Opportunities and Prospects.
- Author
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Shishov, Vladimir V., Tychkov, Ivan I., Anchukaitis, Kevin J., Zelenov, Grigory K., and Vaganov, Eugene A.
- Subjects
CAMBIUM ,XYLEM ,CARBON cycle ,EXPONENTIAL functions ,SEASONS ,TREE-rings - Abstract
More than 60% of tree phytomass is concentrated in stem wood, which is the result of periodic activity of the cambium. Nevertheless, there are few attempts to quantitatively describe cambium dynamics. In this study, we develop a state-of-the-art band model of cambium development, based on the kinetic heterogeneity of the cambial zone and the connectivity of the cell structure. The model describes seasonal cambium development based on an exponential function under climate forcing which can be effectively used to estimate the seasonal cell production for individual trees. It was shown that the model is able to simulate different cell production for fast-, middle- and slow-growing trees under the same climate forcing. Based on actual measurements of cell production for two contrasted trees, the model effectively reconstructed long-term cell production variability (up to 75% of explained variance) of both tree-ring characteristics over the period 1937−2012. The new model significantly simplifies the assessment of seasonal cell production for individual trees of a studied forest stand and allows the entire range of individual absolute variability in the ring formation of any tree in the stand to be quantified, which can lead to a better understanding of the anatomy of xylem formation, a key component of the carbon cycle. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
35. Modelling of the root cap of Zea mays L. in relation to temperature.
- Author
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Clowes, F. A. L. and Wadekar, R.
- Subjects
- *
DEVELOPMENTAL biology , *PLANT roots , *PLANT cell compartmentation , *AGING , *CORN , *TEMPERATURE - Abstract
Rates of mitosis in each of the four tiers of the cap meristem of primary roots of Zea mays L. were measured at uniform root length by a stathmokinetic method and compared with rates for other regions of the apices in seedlings growing at between 15 and 35°C. The highest elemental rate of cap cell production in the proximal tier and in the cap meristem as a whole occurs at 26°C and the proportion of cells supplied by the proximal tier rises from 48% at 15°C to 90% at 35°C. The number of cells in the whole cap and in its meristem decreases with increasing temperature. This is due to the general reduction in the width of root apices with age and growth in length being faster at the higher temperatures. The slimming of the apex is effected by a decline in the proportion of divisions that are longitudinal to the files of cells at the quiescent centre. This is enhanced by a slight but continuous increase in the rate of mitosis in the quiescent centre the higher the temperature (in contrast with the rest of the root whose maximal rate is at 28°C). The decline results in an increase in the elemental rate for longitudinal divisions in the cap initials from 0.02 to 0.17 cells per cell per day between 15 and 35°C and a consequent chant4e in the cell pattern in the cap. [ABSTRACT FROM AUTHOR]
- Published
- 1988
- Full Text
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36. Fully Automated Cultivation of Adipose-Derived Stem Cells in the StemCellDiscovery—A Robotic Laboratory for Small-Scale, High-Throughput Cell Production Including Deep Learning-Based Confluence Estimation.
- Author
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Ochs, Jelena, Biermann, Ferdinand, Piotrowski, Tobias, Erkens, Frederik, Nießing, Bastian, Herbst, Laura, König, Niels, Schmitt, Robert H., and Raganati, Francesca
- Subjects
STEM cells ,HUMAN stem cells ,MESENCHYMAL stem cells ,ROBOTICS ,DEEP learning ,MANUFACTURING processes - Abstract
Laboratory automation is a key driver in biotechnology and an enabler for powerful new technologies and applications. In particular, in the field of personalized therapies, automation in research and production is a prerequisite for achieving cost efficiency and broad availability of tailored treatments. For this reason, we present the StemCellDiscovery, a fully automated robotic laboratory for the cultivation of human mesenchymal stem cells (hMSCs) in small scale and in parallel. While the system can handle different kinds of adherent cells, here, we focus on the cultivation of adipose-derived hMSCs. The StemCellDiscovery provides an in-line visual quality control for automated confluence estimation, which is realized by combining high-speed microscopy with deep learning-based image processing. We demonstrate the feasibility of the algorithm to detect hMSCs in culture at different densities and calculate confluences based on the resulting image. Furthermore, we show that the StemCellDiscovery is capable of expanding adipose-derived hMSCs in a fully automated manner using the confluence estimation algorithm. In order to estimate the system capacity under high-throughput conditions, we modeled the production environment in a simulation software. The simulations of the production process indicate that the robotic laboratory is capable of handling more than 95 cell culture plates per day. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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37. Organização e racionalização de células de costura numa empresa da indústria automóvel
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Sagres, Inês Gonçalves, Sousa, Rui M., and Universidade do Minho
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Lean tools ,Melhoria contínua ,Continuous improvement ,Ferramentas lean ,Produção celular ,Engenharia e Tecnologia::Outras Engenharias e Tecnologias ,Outras Engenharias e Tecnologias [Engenharia e Tecnologia] ,Cell production ,Lean production ,Produtividade ,Productivity - Abstract
Dissertação de mestrado integrado em Engenharia e Gestão Industrial, O presente projeto de dissertação é resultado de um projeto em ambiente empresarial desenvolvido no âmbito do 5º ano do curso de Mestrado Integrado em Engenharia e Gestão Industrial da Universidade do Minho. Através da aplicação de algumas ferramentas Lean, esta dissertação tem como objetivo principal a reconfiguração de células de costura, mais concretamente, o aumento da produtividade e do ganho de área, a simplificação dos fluxos de peça e a redução do número de recursos, e teve lugar na unidade de Arcos de Valdevez da Coindu S.A., uma empresa inserida na indústria automóvel que se dedica à produção de capas de assento. A metodologia de investigação que serviu de base para esta dissertação foi a metodologia Action Research uma vez que é uma estratégia caracterizada pela componente participativa do investigador. O projeto partiu assim de uma descrição e análise crítica da situação atual na qual foram identificados os principais problemas no sector de costura dos produtos da marca Porsche, como foi o caso dos baixos indicadores de desempenho, balanceamentos desajustados, elevadas distâncias percorridas na costura das capas, desorganização de alguns postos, elevados tempos de setup, bem como a falta de envolvimento dos colaboradores. Consequentemente, foram elaboradas algumas propostas de melhoria para combater os problemas identificados. Estas baseavam-se essencialmente na criação de células de costura com mais pessoas do que as atuais com o objetivo de aumentar a taxa de produção e o output por pessoa. Para isso, foram elaborados novos balanceamentos e layouts para cada peça que compõe o carro Porsche, foram criadas estruturas para a redução do tempo de setup e organização dos postos críticos, entre outras propostas. A reconfiguração das células permitiu assim que a empresa obtivesse vários ganhos: aumento da produtividade e taxa de produção gerais na costura Porsche de 22% e 56%, respetivamente, redução do tempo de ciclo das peças em 27%, diminuição das distâncias percorridas em 36% e uma redução média no tempo de setup de 42%, o que, em conjunto, possibilitaram uma redução dos recursos humanos necessários em 42%, entre outros., The present project is the result of a project developed in an industrial environment, developed as part of the Integrated Master in Engineering and Industrial Management of the University of Minho. By applying some of the Lean tools, this dissertation aims the reconfiguration of sewing cells, more specifically, to increase productivity and area gain, to simplify the piece flows and to reduce the number of resources, and it was held at Arcos de Valdevez unity of Coindu S.A., a company inserted in the automotive industry that produces seat covers. This project was made based on the Action-Research methodology since it's a known strategy due to the participative role taken by the researcher and it is the most used methodology in an industrial context. The project begun with a description and critic analysis of the current situation, in which some problems were pointed out regarding the sewing part of the Porsche's products production, those being the low values of some key performance indicators, the uneven cell balancing, the long distances traveled by the covers throughout the sewing operations, disorganization of some of the workstations, high setup times, as wells as the lack of involvement of the workers. Because of that, some improvement proposals were elaborated in order to tackle the identified problems. The improvement proposals found were based on the creation of bigger sewing cells so the production rate would increase and, hopefully, the output per person would to. To do that, new team balancing and layouts were made for each piece of a Porsche car, as wells as new structures to reduce the setup time and organize the critic workstations, among other proposals. The reconfiguration of cells allowed the company to achieve some gains: boost in productivity and production rate in 22% and 56%, respectively, a decrease of cycle time of all Porsche pieces in 27%, a decrease in the traveled distances in 36% and a decrease in setup time of 42%, that, in a general way, allowed the reduction of the needed human resources in 42%, among others.
- Published
- 2018
38. Virus Dynamics Are Influenced by Season, Tides and Advective Transport in Intertidal, Permeable Sediments
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Tim Engelhardt, Lara Sabelhaus, and Verona Vandieken
- Subjects
0106 biological sciences ,0301 basic medicine ,Microbiology (medical) ,Water flow ,advection ,lcsh:QR1-502 ,chemistry.chemical_element ,Intertidal zone ,01 natural sciences ,Microbiology ,Oxygen ,lcsh:Microbiology ,03 medical and health sciences ,Nutrient ,Water column ,virus production ,cell production ,Effluent ,Original Research ,Advection ,010604 marine biology & hydrobiology ,Sediment ,oxygen consumption ,030104 developmental biology ,chemistry ,Environmental chemistry ,Environmental science ,intertidal sands ,flow-through reactors - Abstract
Sandy surface sediments of tidal flats exhibit high microbial activity due to the fast and deep-reaching transport of oxygen and nutrients by porewater advection. On the other hand during low tide, limited transport results in nutrient and oxygen depletion concomitant to the accumulation of microbial metabolites. This study represents the first attempt to use flow-through reactors to investigate virus production, virus transport and the impact of tides and season in permeable sediments. The reactors were filled with intertidal sands of two sites (North beach site and backbarrier sand flat of Spiekeroog island in the German Wadden Sea) to best simulate advective porewater transport through the sediments. Virus and cell release along with oxygen consumption were measured in the effluents of reactors during continuous flow of water through the sediments as well as in tidal simulation experiments where alternating cycles with and without water flow (each for 6 h) were operated. The results showed net rates of virus production (0.3–13.2 × 106 viruses cm−3 h−1) and prokaryotic cell production (0.3–10.0 × 105 cells cm−3 h−1) as well as oxygen consumption rates (56–737 μmol l−1 h−1) to be linearly correlated reflecting differences in activity, season and location of the sediments. Calculations show that total virus turnover was fast with 2 to 4 days, whereas virus-mediated cell turnover was calculated to range between 5–13 or 33–91 days depending on the assumed burst sizes (number of viruses released upon cell lysis) of 14 or 100 viruses, respectively. During the experiments, the homogenized sediments in the reactors became vertically structured with decreasing microbial activities and increasing impact of viruses on prokaryotic mortality with depth. Tidal simulation clearly showed a strong accumulation of viruses and cells in the top sections of the reactors when the flow was halted indicating a consistently high virus production during low tide. In conclusion, cell lysis products due to virus production may fuel microbial communities in the absence of advection-driven nutrient input, but are eventually washed off the surface sediment during high tide and being transported into deeper sediment layers or into the water column together with the produced viruses.
- Published
- 2017
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39. Erythropoiesis with endurance training: dynamics and mechanisms
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Carsten Lundby, Jens P. Goetze, Thomas Haider, Andreas Breenfeldt-Andersen, Anne-Kristine Meinild-Lundby, David Montero, and Laura Oberholzer
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Male ,Erythrocytes ,Time Factors ,Hydrocortisone ,Physiology ,Hemodynamics ,Blood volume ,CELL PRODUCTION ,030204 cardiovascular system & hematology ,Hematocrit ,CENTRAL VENOUS-PRESSURE ,0302 clinical medicine ,red blood cell volume ,Erythropoiesis ,DISTANCE RUNNERS ,Exercise Tolerance ,medicine.diagnostic_test ,BLOOD-VOLUME ,Glycopeptides ,PROFESSIONAL CYCLISTS ,HUMAN SKELETAL-MUSCLE ,medicine.anatomical_structure ,Body Composition ,Female ,erythropoietin ,MIDDLE-DISTANCE ,Atrial Natriuretic Factor ,medicine.drug ,Adult ,medicine.medical_specialty ,HEMATOPOIETIC BONE-MARROW ,Plasma volume ,03 medical and health sciences ,Young Adult ,Endurance training ,Physiology (medical) ,Internal medicine ,medicine ,HEMOGLOBIN MASS ,Humans ,PLASMA-VOLUME ,Plasma Volume ,Erythropoietin ,Exercise ,plasma volume ,business.industry ,030229 sport sciences ,Bicycling ,Red blood cell ,Endocrinology ,Erythrocyte Count ,Physical Endurance ,business ,exercise training - Abstract
The purpose of the present study was to characterize the progression of red blood cell volume (RBCV) expansion and potential volumetric and endocrine regulators of erythropoiesis during endurance training (ET). Nine healthy, untrained volunteers (age = 27 +/- 4 yr) underwent supervised ET consisting of 3-4 x 60 min cycle ergometry sessions per week for 8 wk. Plasma volume (PV), RBCV, and overnight fasting hematological markers were determined before and at weeks 2, 4, and 8 of ET. In addition, plasma erythropoietin (EPO), cortisol, copeptin, and proatrial natriuretic peptide concentrations were measured during a 3-h morning period at baseline and postexercise at weeks 1 and 8. PV increased from baseline (2,405 +/- 335 ml) at weeks 2, 4, and 8 (+/- 374 +/- 194, +505 +/- 156, and + 341 +/- 160 ml, respectively, P
- Published
- 2017
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40. Causes and correlations in cambium phenology: towards an integrated framework of xylogenesis
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Annie Deslauriers, Sergio Rossi, and Hubert Morin
- Subjects
Mixed model ,Causal modelling ,Physiology ,Climate ,Plant Science ,Biology ,Models, Biological ,Trees ,Cell Wall ,Xylem ,cell production ,secondary wall formation ,Picea ,Cambium ,Causal model ,d-sep test ,xylogenesis ,Plant Stems ,Phenology ,Ecology ,fungi ,Taiga ,Quebec ,Cell Differentiation ,Wood ,Research Papers ,Black spruce ,Picea mariana - Abstract
Although habitually considered as a whole, xylogenesis is a complex process of division and maturation of a pool of cells where the relationship between the phenological phases generating such a growth pattern remains essentially unknown. This study investigated the causal relationships in cambium phenology of black spruce [Picea mariana (Mill.) BSP] monitored for 8 years on four sites of the boreal forest of Quebec, Canada. The dependency links connecting the timing of xylem cell differentiation and cell production were defined and the resulting causal model was analysed with d-sep tests and generalized mixed models with repeated measurements, and tested with Fisher’s C statistics to determine whether and how causality propagates through the measured variables. The higher correlations were observed between the dates of emergence of the first developing cells and between the ending of the differentiation phases, while the number of cells was significantly correlated with all phenological phases. The model with eight dependency links was statistically valid for explaining the causes and correlations between the dynamics of cambium phenology. Causal modelling suggested that the phenological phases involved in xylogenesis are closely interconnected by complex relationships of cause and effect, with the onset of cell differentiation being the main factor directly or indirectly triggering all successive phases of xylem maturation.
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- 2011
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41. The StemCellFactory: A Modular System Integration for Automated Generation and Expansion of Human Induced Pluripotent Stem Cells.
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Elanzew A, Nießing B, Langendoerfer D, Rippel O, Piotrowski T, Schenk F, Kulik M, Peitz M, Breitkreuz Y, Jung S, Wanek P, Stappert L, Schmitt RH, Haupt S, Zenke M, König N, and Brüstle O
- Abstract
While human induced pluripotent stem cells (hiPSCs) provide novel prospects for disease-modeling, the high phenotypic variability seen across different lines demands usage of large hiPSC cohorts to decipher the impact of individual genetic variants. Thus, a much higher grade of parallelization, and throughput in the production of hiPSCs is needed, which can only be achieved by implementing automated solutions for cell reprogramming, and hiPSC expansion. Here, we describe the StemCellFactory, an automated, modular platform covering the entire process of hiPSC production, ranging from adult human fibroblast expansion, Sendai virus-based reprogramming to automated isolation, and parallel expansion of hiPSC clones. We have developed a feeder-free, Sendai virus-mediated reprogramming protocol suitable for cell culture processing via a robotic liquid handling unit that delivers footprint-free hiPSCs within 3 weeks with state-of-the-art efficiencies. Evolving hiPSC colonies are automatically detected, harvested, and clonally propagated in 24-well plates. In order to ensure high fidelity performance, we have implemented a high-speed microscope for in-process quality control, and image-based confluence measurements for automated dilution ratio calculation. This confluence-based splitting approach enables parallel, and individual expansion of hiPSCs in 24-well plates or scale-up in 6-well plates across at least 10 passages. Automatically expanded hiPSCs exhibit normal growth characteristics, and show sustained expression of the pluripotency associated stem cell marker TRA-1-60 over at least 5 weeks (10 passages). Our set-up enables automated, user-independent expansion of hiPSCs under fully defined conditions, and could be exploited to generate a large number of hiPSC lines for disease modeling, and drug screening at industrial scale, and quality., (Copyright © 2020 Elanzew, Nießing, Langendoerfer, Rippel, Piotrowski, Schenk, Kulik, Peitz, Breitkreuz, Jung, Wanek, Stappert, Schmitt, Haupt, Zenke, König and Brüstle.)
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- 2020
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42. Prediction of Human Induced Pluripotent Stem Cell Cardiac Differentiation Outcome by Multifactorial Process Modeling.
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Williams B, Löbel W, Finklea F, Halloin C, Ritzenhoff K, Manstein F, Mohammadi S, Hashemi M, Zweigerdt R, Lipke E, and Cremaschi S
- Abstract
Human cardiomyocytes (CMs) have potential for use in therapeutic cell therapy and high-throughput drug screening. Because of the inability to expand adult CMs, their large-scale production from human pluripotent stem cells (hPSC) has been suggested. Significant improvements have been made in understanding directed differentiation processes of CMs from hPSCs and their suspension culture-based production at chemically defined conditions. However, optimization experiments are costly, time-consuming, and highly variable, leading to challenges in developing reliable and consistent protocols for the generation of large CM numbers at high purity. This study examined the ability of data-driven modeling with machine learning for identifying key experimental conditions and predicting final CM content using data collected during hPSC-cardiac differentiation in advanced stirred tank bioreactors (STBRs). Through feature selection, we identified process conditions, features, and patterns that are the most influential on and predictive of the CM content at the process endpoint, on differentiation day 10 (dd10). Process-related features were extracted from experimental data collected from 58 differentiation experiments by feature engineering. These features included data continuously collected online by the bioreactor system, such as dissolved oxygen concentration and pH patterns, as well as offline determined data, including the cell density, cell aggregate size, and nutrient concentrations. The selected features were used as inputs to construct models to classify the resulting CM content as being " sufficient " or " insufficient " regarding pre-defined thresholds. The models built using random forests and Gaussian process modeling predicted insufficient CM content for a differentiation process with 90% accuracy and precision on dd7 of the protocol and with 85% accuracy and 82% precision at a substantially earlier stage: dd5. These models provide insight into potential key factors affecting hPSC cardiac differentiation to aid in selecting future experimental conditions and can predict the final CM content at earlier process timepoints, providing cost and time savings. This study suggests that data-driven models and machine learning techniques can be employed using existing data for understanding and improving production of a specific cell type, which is potentially applicable to other lineages and critical for realization of their therapeutic applications., (Copyright © 2020 Williams, Löbel, Finklea, Halloin, Ritzenhoff, Manstein, Mohammadi, Hashemi, Zweigerdt, Lipke and Cremaschi.)
- Published
- 2020
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43. Pattern of xylem phenology in conifers of cold ecosystems at the Northern Hemisphere
- Author
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Hubert Morin, David Frank, Gregory King, Eryuan Liang, Peter Prislan, Walter Oberhuber, Antonio Saracino, Václav Treml, Henri E. Cuny, Cyrille B. K. Rathgeber, Pekka Nöjd, Tuula Jyske, Cornelia Krause, Harri Mäkinen, Andreas Gruber, Jianguo Huang, Annie Deslauriers, Katarina Čufar, Sergio Rossi, Irene Swidrak, Jožica Gričar, Jakub Kašpar, Tommaso Anfodillo, Patrick Fonti, Université du Québec à Chicoutimi (UQAC), Universita degli Studi di Padova, University of Ljubljana, Laboratoire d'Etudes des Ressources Forêt-Bois (LERFoB), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Swiss Federal Institute for Forest, Snow and Avalanche Research WSL, Oeschger Centre for Climate Change Research (OCCR), University of Bern, Slovenian Forestry Institute, University of Innsbruck, Chinese Academy of Sciences [Changchun Branch] (CAS), Natural Resources Institute Finland, Charles University, University of Naples Federico II, ANR (ANR-11-LABX-0002-0), AgroParisTech-Institut National de la Recherche Agronomique (INRA), Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Natural resources institute Finland, Charles University [Prague] (CU), Rossi, S, Anfodillo, T, Čufar, K, Cuny, He, Deslauriers, A, Fonti, P, Frank, D, Gričar, J, Gruber, A, Huang, J. G, Jyske, T, Kašpar, J, King, G, Krause, C, Liang, E, Mäkinen, H, Morin, H, Nöjd, P, Oberhuber, W, Prislan, P, Rathgeber, Cbk, Saracino, Antonio, Swidrak, I, and Treml, V.
- Subjects
0106 biological sciences ,010504 meteorology & atmospheric sciences ,bois de résineux ,cambium, cell differentiation, cell production, climate change, conifers, growth, meristem, secondary wall formation ,xylem ,Atmospheric sciences ,01 natural sciences ,meristem ,Trees ,General Environmental Science ,Global and Planetary Change ,Ecology ,biology ,Phenology ,xylème ,facteur climatique ,phénologie ,Cold Temperature ,climate change ,softwood ,conifers ,Tracheid ,coniferous tree ,Seasons ,growth ,Plant Development ,Growing season ,cambium ,phenology ,Pinophyta ,formation du bois ,température ,Environmental Chemistry ,cell production ,[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,secondary wall formation ,Ecosystem ,0105 earth and related environmental sciences ,conifère ,Scots pine ,Northern Hemisphere ,Xylem ,15. Life on land ,biology.organism_classification ,Black spruce ,Tracheophyta ,cell differentiation ,13. Climate action ,010606 plant biology & botany - Abstract
The interaction between xylem phenology and climate assesses forest growth and productivity and carbon storage across biomes under changing environmental conditions. We tested the hypothesis that patterns of wood formation are maintained unaltered despite the temperature changes across cold ecosystems. Wood microcores were collected weekly or biweekly throughout the growing season for periods varying between 1 and 13 years during 1998–2014 and cut in transverse sections for assessing the onset and ending of the phases of xylem differentiation. The data set represented 1321 trees belonging to 10 conifer species from 39 sites in the Northern Hemisphere and covering an interval of mean annual temperature exceeding 14 K. The phenological events and mean annual temperature of the sites were related linearly, with spring and autumnal events being separated by constant intervals across the range of temperature analysed. At increasing temperature, first enlarging, wall-thickening and mature tracheids appeared earlier, and last enlarging and wall-thickening tracheids occurred later. Overall, the period of wood formation length- ened linearly with the mean annual temperature, from 83.7 days at -2 °C to 178.1 days at 12 °C, at a rate of 6.5 days °C-1. April–May temperatures produced the best models predicting the dates of wood formation. Our findings demonstrated the uniformity of the process of wood formation and the importance of the environmental conditions occurring at the time of growth resumption. Under warming scenarios, the period of wood formation might lengthen synchronously in the cold biomes of the Northern Hemisphere.
- Published
- 2016
- Full Text
- View/download PDF
44. Análise e melhoria do desempenho de uma célula de produção de painéis digitais
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Araújo, Maria Inês Verde de, Dinis-Carvalho, José, and Universidade do Minho
- Subjects
Desperdícios ,Waste ,Engenharia e Tecnologia::Outras Engenharias e Tecnologias ,Lean manufacturing ,Cell production ,Outras Engenharias e Tecnologias [Engenharia e Tecnologia] ,Célula de produção ,Balancing ,Balanceamento - Abstract
Dissertação de mestrado em Engenharia Industrial, A presente dissertação foi realizada no âmbito do Mestrado em Engenharia Industrial (ramo Gestão Industrial) e foi desenvolvida na empresa Bosch Car Multimédia Portugal, S.A. O principal objetivo desta dissertação foi analisar e melhorar o desempenho de uma célula de produção de painéis digitais de instrumentos, através da avaliação e redução dos seus principais desperdícios e da aplicação de princípios e ferramentas Lean Manufacturing. De forma a analisar e a diagnosticar a área produtiva em estudo, utilizou-se a ferramenta amostragem do trabalho (multimomento) onde se identificaram os principais desperdícios, nomeadamente manuseamento excessivo de materiais, transportes e movimentações, reparação e esperas. Deste modo, realizaram-se várias análises de processo de forma a identificar as causas de tais desperdícios. Após a identificação dos problemas apresentaram-se propostas de melhoria, nomeadamente alteração do tipo de embalagem de dois materiais críticos, alteração de layout da célula, algumas otimizações de processo e implementação de oficina para programação do PCB NVÍDIA. As propostas de melhoria apresentadas foram todas implementadas. Os resultados mais relevantes foram no output das 5 células do mesmo cliente. Estas otimizações levaram a um ganho anual de 45 800 peças e € 90 000 com a redução do tempo-pessoa (VT). Para além destes ganhos, conseguiu-se reduzir o work in process em 17%, reduzir o tempo de atravessamento em 21,1% e aumentar o rácio de valor acrescentado no posto bottleneck em 20,7%., The present work was performed under the Master in Industrial Engineering (branch Industrial Management) and developed at Bosch Car Multimedia Portugal, S.A. The main goal of this dissertation was to analyze and improve the performance of a digital instruments panel production cell, through the evaluation and reduction of the main waste and through the application of Lean Manufacturing principles and tools. In order to analyze and diagnose the intended productive area, we use a working sample tool (multimomento) which identifies the main wastes, as excessive material handling, transport and crossing time, repairs and waits. In this way, several process analyzes were performed in order to identify the causes of such wastes. After the problems identification some improvement measures were presented, namely the change of two critical components package type, cell layout change, some process optimization and the implementation of a pool cell for NVIDIA PCB programming. All the improvement proposals submitted were implemented. The most relevant results were on the 5 cells output from the same customer. These enhancements lead to an annual gain of 45 800 units and € 90 000 due to VT reduction. In addition to these gains, it was possible also reduce the work in process in 17%, the throughput time in 21,1% and increase the added value ratio on our bottleneck station in 20,7%.
- Published
- 2016
45. Pattern of xylem phenology in conifers of cold ecosystems at the Northern Hemisphere
- Author
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Rossi, Sergio, Anfodillo, Tommaso, Čufar, Katarina, Cuny, Henri E., Deslauriers, Annie, Fonti, Patrick, Frank, David, Gričar, Jožica, Gruber, Andreas, Huang, Jian-Guo, Jyske, Tuula, Kašpar, Jakub, King, Gregory, Krause, Cornelia, Liang, Eryuan, Mäkinen, Harri, Morin, Hubert, Nöjd, Pekka, Oberhuber, Walter, Prislan, Peter, Rathgeber, Cyrille B.K., Saracino, Antonio, Swidrak, Irene, Treml, Václav, Rossi, Sergio, Anfodillo, Tommaso, Čufar, Katarina, Cuny, Henri E., Deslauriers, Annie, Fonti, Patrick, Frank, David, Gričar, Jožica, Gruber, Andreas, Huang, Jian-Guo, Jyske, Tuula, Kašpar, Jakub, King, Gregory, Krause, Cornelia, Liang, Eryuan, Mäkinen, Harri, Morin, Hubert, Nöjd, Pekka, Oberhuber, Walter, Prislan, Peter, Rathgeber, Cyrille B.K., Saracino, Antonio, Swidrak, Irene, and Treml, Václav
- Abstract
The interaction between xylem phenology and climate assesses forest growth and productivity and carbon storage across biomes under changing environmental conditions. We tested the hypothesis that patterns of wood formation are maintained unaltered despite the temperature changes across cold ecosystems. Wood microcores were collected weekly or biweekly throughout the growing season for periods varying between 1-13 years during 1998-2014 and cut in transverse sections for assessing the onset and ending of the phases of xylem differentiation. The dataset represented 1321 trees belonging to 10 conifer species from 39 sites in the Northern hemisphere and covering an interval of mean annual temperature exceeding 14 K. The phenological events and mean annual temperature of the sites were related linearly, with spring and autumnal events being separated by constant intervals across the range of temperature analysed. At increasing temperature, first enlarging, wall-thickening and mature tracheids appeared earlier, and last enlarging and wall-thickening tracheids occurred later. Overall, the period of wood formation lengthened linearly with the mean annual temperature, from 83.7 days at -2 °C to 178.1 days at 12 °C, at a rate of 6.5 days °C-1. April-May temperatures produced the best models predicting the dates of wood formation. Our findings demonstrated the uniformity of the process of wood formation and the importance of the environmental conditions occurring at the time of growth resumption. Under warming scenarios, the period of wood formation might lengthen synchronously in the cold biomes of the Northern hemisphere.
- Published
- 2016
- Full Text
- View/download PDF
46. A quantitative analysis of cellular manufacturing in apparel industry by using simulation
- Author
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Pan, Guoqiang
- Subjects
Production control ,Producció -- Control ,Telèfon mòbil ,apparel industry ,Economia i organització d'empreses::Direcció d’operacions::Sistemes productius [Àrees temàtiques de la UPC] ,ddc:650 ,SIMIO ,cell production ,Production control--Cost effectiveness ,Cellular telephones ,simulation - Abstract
Purpose: This research, by using the SIMIO simulation platform, provides a quantitative and comparative analysis of how the efficiency of four different cell production modes is affected. It is hoped that the results will be of some help for garment factories to optimize their production lines. Design/methodology/approach: The SIMIO simulation platform was employed in the research and comparisons were made of the simulation test results about the four popular cellular manufacturing modes. Findings: The operation mode, number of operators, and number of buffer areas are key factors affecting the production line efficiency, and need to be reasonably set to achieve the highest efficiency. Originality/value: As most research literature so far is qualitative, this research provided a simulation-based quantitative analysis of the production efficiency under different cell production modes.
- Published
- 2014
47. Are neighboring trees in tune? Wood formation in Pinus pinaster
- Author
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Filipe Campelo, Cristina Nabais, Joana Vieira, and Sergio Rossi
- Subjects
Mediterranean climate ,Cambium ,Phenology ,Cell production ,Xylem ,Forestry ,Plant Science ,15. Life on land ,Biology ,Mediterranean ,biology.organism_classification ,Late summer ,Tree size ,Plant ecology ,Horticulture ,Tree age ,Botany ,Dendrochronology ,Pinus pinaster ,Xylogenesis - Abstract
Neighboring trees growing under identical environmental conditions can exhibit different dynamics and periods of growth. Despite the recent advances in cambial biology, the exogenous and endogenous factors generating asynchronous xylem growths still remain undetermined. This study investigated timings and duration of xylem formation in maritime pine (Pinus pinaster Ait.) from an even-aged plantation in Portugal growing under Mediterranean climate. Cambial phenology and stem diameter were monitored weekly, from March to December 2010, on two classes of trees divided according to the tree ring widths of the last 15 years, but similar age and size: fast- and slow-growing trees. We tested the hypothesis that differences in tree ring widths result from cell production which in turn affects timings of xylogenesis and that the bimodal growth pattern, typical of the Mediterranean, originates from a double reactivation of the cambium: in spring and autumn. Cambial activity started earlier and ended later in fast-growing trees, confirming that cell production is a key factor determining the duration of xylogenesis. Intra-annual variations in stem diameter recorded by band dendrometers revealed two peaks of increment occurring in spring and late summer. However, the number of cambial cells did not increase in late summer, which suggested that the second peak of increment was caused by stem rehydration, rather than by a reactivation of cell division. These results demonstrated that the variability in the timings of xylem phenology observed among trees of the same age and size and growing under similar environmental conditions was closely related to cell production and not to age or size per se. This study was supported by the Fundac¸a˜o para a Cieˆncia e a Tecnologia, Ministe´rio da Educac¸a˜o e Cieˆncia (FCT) cofinanced by Compete, through the project PTDC/AAC-AMB/111675/ 2009. Joana Vieira was supported by a Ph.D. Grant (SFRH/BD/ 48089/2008) and Filipe Campelo by a postdoctoral research grant (SFRH/BPD/47822/2008), both grants from FCT with funds from POPH (Portuguese Operational Human Potential Program) and QREN Portugal (Portuguese National Strategic Reference Framework).
- Published
- 2014
48. A meta-analysis of cambium phenology and growth: linear and non-linear patterns in conifers of the northern hemisphere
- Author
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Andreas Gruber, Peter Prislan, Hubert Morin, Patrick Fonti, Cornelia Krause, Cyrille B. K. Rathgeber, Walter Oberhuber, David Frank, Henri E. Cuny, Gregory King, Tommaso Anfodillo, Katarina Čufar, Jožica Gričar, AAnnie Deslauriers, Sergio Rossi, Département des Sciences Fondamentales, Université du Québec à Chicoutimi (UQAC), Department of Land, Environment, Agriculture and Forestry (TeSAF), Universita degli Studi di Padova, Biotechnical Faculty, University of Ljubljana, Laboratoire d'Etudes des Ressources Forêt-Bois (LERFoB), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, Swiss Federal Institute for Forest, Snow and Avalanche Research WSL, Oeschger Centre for Climate Change Research (OCCR), University of Bern, Department of Yield and Silviculture, Slovenian Forestry Institute, Institute of Botany, University of Innsbruck, Leopold Franzens Univ Innsbruck, Inst Bot, Innsbruck, Austria, Université Paris Diderot - Paris 7 (UPD7), Austrian Science Fund [FWF P19563-B16, P22280-B16], Conseil de Recherches en Sciences Naturelles et en Genie du Canada, Consortium de Recherche sur la Foret Boreale Commerciale, Fonds de Recherche sur la Nature et les Technologies du Quebec, Foret d'enseignement et de recherche Simoncouche, Slovenian Research Agency [P4-0015, P4-0107], Swiss National Foundation [INTEGRAL 121859], UNIFORALL [CPDA110234], EU COST Action [FP1106], AgroParisTech-Institut National de la Recherche Agronomique (INRA), and Swiss Federal Institute for Forest, Snow and Landscape Research WSL
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0106 biological sciences ,Canada ,productivity ,Range (biology) ,growth ,[SDV]Life Sciences [q-bio] ,Growing season ,Plant Science ,Biology ,010603 evolutionary biology ,01 natural sciences ,meristem ,phenology ,Xylem ,cell production ,Ecosystem ,secondary wall formation ,910 Geography & travel ,Cambium ,xylogenesis ,Ecology ,Phenology ,Northern Hemisphere ,Primary production ,15. Life on land ,Europe ,Tracheophyta ,cell differentiation ,climate change ,560 Fossils & prehistoric life ,13. Climate action ,conifers ,Original Article ,010606 plant biology & botany - Abstract
Background and Aims Ongoing global warming has been implicated in shifting phenological patterns such as the timing and duration of the growing season across a wide variety of ecosystems. Linear models are routinely used to extrapolate these observed shifts in phenology into the future and to estimate changes in associated ecosystem properties such as net primary productivity. Yet, in nature, linear relationships may be special cases. Biological processes frequently follow more complex, non-linear patterns according to limiting factors that generate shifts and discontinuities, or contain thresholds beyond which responses change abruptly. This study investigates to what extent cambium phenology is associated with xylem growth and differentiation across conifer species of the northern hemisphere. Methods Xylem cell production is compared with the periods of cambial activity and cell differentiation assessed on a weekly time scale on histological sections of cambium and wood tissue collected from the stems of nine species in Canada and Europe over 1–9 years per site from 1998 to 2011. Key Results The dynamics of xylogenesis were surprisingly homogeneous among conifer species, although dispersions from the average were obviously observed. Within the range analysed, the relationships between the phenological timings were linear, with several slopes showing values close to or not statistically different from 1. The relationships between the phenological timings and cell production were distinctly non-linear, and involved an exponential pattern. Conclusions The trees adjust their phenological timings according to linear patterns. Thus, shifts of one phenological phase are associated with synchronous and comparable shifts of the successive phases. However, small increases in the duration of xylogenesis could correspond to a substantial increase in cell production. The findings suggest that the length of the growing season and the resulting amount of growth could respond differently to changes in environmental conditions.
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- 2013
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49. Análise e melhoria do desempenho da montagem final de antenas numa empresa do ramo automóvel
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Tinoco, Cátia Juliana da Silva, Carvalho, Dinis, and Universidade do Minho
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Desperdícios ,Waste ,Cell production ,658.5 ,Lean production ,Célula de produção ,WID - Abstract
Dissertação de mestrado em Engenharia Industrial – Gestão Industrial, A presente dissertação de mestrado foi desenvolvida na empresa Delphi Automotive Systems - Portugal S.A., em Braga, no seguimento da constatação por parte da empresa da existência de excesso de movimentações, transportes e WIP provocados essencialmente pela organização fortemente orientada ao processo desta área. Os principais objetivos desta dissertação são a análise e diagnóstico da unidade produtiva de montagem de antenas, a identificação e avaliação dos seus principais desperdícios e a criação de propostas de melhoria de forma a reduzir os desperdícios e aumentar o seu desempenho. Por forma a analisar e a diagnosticar a unidade produtiva utilizou-se a ferramenta waste identification diagram (WID) onde se identificaram os desperdícios, nomeadamente elevados transportes, movimentações, esperas e trabalho em curso (WIP). No sentido de identificar as razões que levam a tais desperdícios recorreu-se ao diagrama de causa-efeito (diagrama de Ishikawa). Identificadas as causas, fez-se propostas de melhoria de forma a colmatar estes desperdícios encontrados, destacando-se a proposta de melhoria que passa pela criação de células de produção para a família de antenas que representa elevados custos com desperdícios para a empresa – as antenas Ford ECBP. Com esta proposta pretende-se reduzir 23995,04€/ano em WIP, as distâncias percorridas pelos operadores em 104 291,56 €/ano, o tempo de atravessamento de 765,67 minutos para 8,352 minutos, o espaço ocupado em 14%, aumentar a capacidade produtiva em 5728 antenas/dia e aumentar o rácio de valor acrescentado de 0,028% para 2,57%., This dissertation was developed in Delphi Automotive Systems Company-Portugal S.A., in Braga, following verification by the company of the existence of excess movement, transport and WIP caused essentially by the organization strongly oriented to the process in this area. The main objectives of this dissertation are the analysis and diagnosis of the production unit antennas assembly, the identification and assessment of their main waste and creating proposals for improvements in order to reduce waste and increase your performance. In order to analyse and diagnose the productive unit used the waste identification diagram (WID) which identified the waste, including high transport, movimentation, waits and work in progress (WIP). In order to identify the reasons that lead to such wastes resorted to the cause-effect diagram (Ishikawa diagram). Identified the causes, it was proposed improvements in order to bridge these waste found, highlighting the improved proposal that goes through the creation of production cells for the family of antennas that represents high costs with waste to the company – the Ford ECBP antennas. This proposal is intended to reduce 23995,04€ per year in WIP, the distances covered by the operators in 104291.56 € per year, crossing time of 765,67 minutes to 8,352 minutes, the space occupied on 14%, to increase the production capacity in 5728 antennas per day and increase the ratio of added value of 0,028% to 2,57%.
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- 2013
50. Humanejša proizvodnja za izdelavo perila v podjetju Lisca d.d. s postavitvijo celičnega sistema : diplomsko delo visokošolskega strokovnega študijskega programa
- Author
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Urbančič, Tina and Polajnar, Andrej
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konfekcijska tehnologija ,spodnje perilo ,cell production ,forming workplace ,udc:65.015.12:687.2(043.2) ,underwear ,oblikovanje delovnega mesta ,celična proizvodnja ,confection technology - Published
- 2007
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