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Molecular biology techniques are important tools for studying animal health and production characteristics. Thus, determining the genotypes of animals with high genetic value enables the implementation of genetic improvement programs, especially related to sperm and testicular characteristics in cattle. The objective of this study was to detect polymorphisms in the promoter region of the FSH-β gene using the Tetra-primer-PCR (T-ARMS-PCR) technique and associate these polymorphisms with seminal parameters and scrotal perimeter in Nellore bulls. Semen samples were collected and evaluated for volume, sperm motility, and vigor, and scrotal perimeter was measured in 200 bulls. DNA extractions and genotyping of the FSH-βU1 and FSH-βU2 polymorphisms were performed using the T-ARMS-PCR technique. Population genetics parameters were estimated, and associations between genotypes and semen and testicular characteristics were assessed. Both SNPs showed variability with allele frequencies close to 0.500 and an excess of heterozygotes (above 0.600). No inbreeding was detected (FIS -0.3304 and -0.2511, respectively), and deviations from Hardy-Weinberg equilibrium were observed (P

Indicine cattle breeds are adapted to the tropical climate, and their coat plays an important role in this process. Coat color influences thermoregulation and the adhesion of ectoparasites and may be associated with productive and reproductive traits. Furthermore, coat color is used for breed qualification, with breeders preferring certain colors. The Gir cattle is characterized by a wide variety of coat colors. Therefore, we performed genome-wide association studies to identify candidate genes for coat color in Gir cattle. Different phenotype scenarios were considered in the analyses and regions were identified on eight chromosomes. Some regions and many candidate genes are influencing coat color in the Gir cattle, which was found to be a polygenic trait. The candidate genes identified have been associated with white spotting patterns and base coat color in cattle and other species. In addition, a possible epistatic effect on coat color determination in the Gir cattle was suggested. This is the first published study that identified genomic regions and listed candidate genes associated with coat color in Gir cattle. The findings provided a better understanding of the genetic architecture of the trait in the breed and will allow to guide future fine-mapping studies for the development of genetic markers for selection. [ABSTRACT FROM AUTHOR]

Abstract This study evaluated the nutritional and productive performance of Nellore purebred heifers and crossbred Brangus x Nellore (BGNE) and Braford x Nellore (BFNE) in a feedlot system. Thirty heifers (10 of each genetic group) with an average age of 18 months and an initial body weight of 261 kg were used. The experiment was structured and conducted according to a completely randomized design, with three treatments. Heifers received two diets (60 days each) during the experimental period. The experiment lasted 120 days with four experimental periods. Nellore heifers had a lower intake than crossbred heifers (P

The objective of this research was to estimate genetic parameters and genetic trends (GT) for 305-day milk yield (MY305) and 305-day fat yield (FY305) of purebred Dairy Gir animals of the National Dairy Gir Breeding Program. The restricted maximum likelihood method was used in an animal model. GT were obtained via linear regression and divided into two periods (1935-1992 and 1993-2013 for PL305; 1935-1992 and 1993-2010 for MY305). The estimated heritabilities were 0.23 (MY305) and 0.10 (FY305). The GT (kg/year) values for MY305 in the 2nd period for measured females (25.49), females (26.11), and males (35.13) were higher than those found in the 1st period (2.52; 2.06, and 1.00, respectively). The heritability estimated for MY305 confirmed the possibility of genetic improvement by selection and indicated a lower additive genetic effect on FY305 of purebred animals. The genetic progress for MY305 in all purebred population is denoted by the more expressive gains found from 1990’s, when the first bull catalogs were published. [ABSTRACT FROM AUTHOR]

Beef cattle affected by feet and legs malformations (FLM) cannot perform their productive and reproductive functions satisfactorily, resulting in significant economic losses. Accelerated weight gain in young animals due to increased fat deposition can lead to ligaments, tendon and joint strain and promote gene expression patterns that lead to changes in the normal architecture of the feet and legs. The possible correlated response in the FLM due to yearling weight (YW) selection suggest that this second trait could be used as an indirect selection criterion. Therefore, FLM breeding values and the genetic correlation between FLM and yearling weight (YW) were estimated for 295,031 Nellore animals by fitting a linear-threshold model in a Bayesian approach. A genome-wide association study was performed to identify genomic windows and positional candidate genes associated with FLM. The effects of single nucleotide polymorphisms (SNPs) on FLM phenotypes (affected or unaffected) were estimated using the weighted single-step genomic BLUP method, based on genotypes of 12,537 animals for 461,057 SNPs. Twelve non-overlapping windows of 20 adjacent SNPs explaining more than 1% of the additive genetic variance were selected for candidate gene annotation. Functional and gene prioritization analysis of candidate genes identified six genes (ATG7, EXT1, ITGA1, PPARD, SCUBE3, and SHOX) that may play a role in FLM expression due to their known role in skeletal muscle development, aberrant bone growth, lipid metabolism, intramuscular fat deposition and skeletogenesis. Identifying genes linked to foot and leg malformations enables selective breeding for healthier herds by reducing the occurrence of these conditions. Genetic markers can be used to develop tests that identify carriers of these mutations, assisting breeders in making informed breeding decisions to minimize the incidence of malformations in future generations, resulting in greater productivity and animal welfare. [ABSTRACT FROM AUTHOR]

Beef cattle affected by feet and legs malformations (FLM) cannot perform their productive and reproductive functions satisfactorily, resulting in significant economic losses. Accelerated weight gain in young animals due to increased fat deposition can lead to ligaments, tendon and joint strain and promote gene expression patterns that lead to changes in the normal architecture of the feet and legs. The possible correlated response in the FLM due to yearling weight (YW) selection suggest that this second trait could be used as an indirect selection criterion. Therefore, FLM breeding values and the genetic correlation between FLM and yearling weight (YW) were estimated for 295,031 Nellore animals by fitting a linear-threshold model in a Bayesian approach. A genome-wide association study was performed to identify genomic windows and positional candidate genes associated with FLM. The effects of single nucleotide polymorphisms (SNPs) on FLM phenotypes (affected or unaffected) were estimated using the weighted single-step genomic BLUP method, based on genotypes of 12,537 animals for 461,057 SNPs. Twelve non-overlapping windows of 20 adjacent SNPs explaining more than 1% of the additive genetic variance were selected for candidate gene annotation. Functional and gene prioritization analysis of candidate genes identified six genes (ATG7, EXT1, ITGA1, PPARD, SCUBE3, and SHOX) that may play a role in FLM expression due to their known role in skeletal muscle development, aberrant bone growth, lipid metabolism, intramuscular fat deposition and skeletogenesis. Identifying genes linked to foot and leg malformations enables selective breeding for healthier herds by reducing the occurrence of these conditions. Genetic markers can be used to develop tests that identify carriers of these mutations, assisting breeders in making informed breeding decisions to minimize the incidence of malformations in future generations, resulting in greater productivity and animal welfare.

Shades of grey and brown are a dominant component in mammal coat colours, representing a fundamental trait involved in a great number of processes including cryptism, sexual selection and signalling. The genetic mechanisms of the grey colouration in mammals are very complex and controlled by hundreds of genes whose effects and interactions are still largely unclear. In this study, we adopted a robust multi-cohort Fst outlier approach based on pairwise contrasts between seven grey indicine cattle breeds and both taurine and indicine non-grey cattle breeds in order to find genomic regions potentially related to the grey colouration. On the basis of three main drawn settings, built in order to control both the effect of the sample size and the genetic structure, we have identified some signals common to those obtained in a previous work employing only taurine cattle. In particular, using the top 1% Fst approach, we detected a candidate region (22.6–23.8 megabases) on chromosome 14 in which genes related to pigmentation have been already documented. In addition, when we constructed a phylogenetic tree using the significant markers identified in this study and including also the genotyping data at these loci of both the grey taurine and the extinct wild auroch, we found a topological repartition consistent with breed colour pattern rather than with the known bovine evolutionary history. Thus, on the basis of this evidence, together with the geographical distribution of the current taurine grey cattle, an ancestral indicine origin for the grey phenotype would seem to be a conceivable interpretation. In this context, a higher thermo-tolerance and less UV-induced damage of the grey phenotype might have favoured the retention of advantageous genes into the taurine genome during the post-Neolithic human-mediated cattle expansions. [ABSTRACT FROM AUTHOR]

ABSTRACT The objective of this study was to estimate genetic parameters and genetic trends of different conformation and management traits regularly measured within the context of the National Dairy Gir Breeding Program (PNMGL). The estimation of genetic and residual variances for each trait was performed using average information restricted maximum likelihood (AI-REML) procedure in AIREMLF90 program software. The population was divided into three subpopulations constituted by measured females (with phenotype records), all females, and males. Linear regressions were applied for each trait, considering two periods of birth (1st period: 1938-1996; 2nd period: 1997-2012). The estimated heritability of conformation and management traits varied from 0.01 to 0.53, denoting a perspective of genetic improvement through selection and corrective matings for purebred Dairy Gir populations. The average genetic changes in conformation and management traits were, in general, variable and inexpressive, showing that the selection of Dairy Gir may have had been directed essentially to increase milk yield. The analysis of the two periods of birth indicated that some linear traits present progress (although inexpressive) in the 2nd period (more recent period).

Beef is a source of essential fatty acids (EFA), linoleic (LA) and alpha-linolenic (ALA) acids, which protect against inflammatory and cardiovascular diseases in humans. However, the intramuscular EFA profile in cattle is a complex and polygenic trait. Thus, this study aimed to identify potential regulatory genes of the essential fatty acid profile in Longissimus thoracis of Nellore cattle finished in feedlot. Forty-four young bulls clustered in four groups of fifteen animals with extreme values for each FA were evaluated through differentially expressed genes (DEG) analysis and two co-expression methodologies (WGCNA and PCIT). We highlight the ECHS1, IVD, ASB5, and ERLIN1 genes and the TF NFIA, indicated in both FA. Moreover, we associate the NFYA, NFYB, PPARG, FASN, and FADS2 genes with LA, and the RORA and ELOVL5 genes with ALA. Furthermore, the functional enrichment analysis points out several terms related to FA metabolism. These findings contribute to our understanding of the genetic mechanisms underlying the beef EFA profile in Nellore cattle finished in feedlot. [ABSTRACT FROM AUTHOR]

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Abstract Background The cattle introduced by European conquerors during the Brazilian colonization period were exposed to a process of natural selection in different types of biomes throughout the country, leading to the development of locally adapted cattle breeds. In this study, whole-genome re-sequencing data from indicine and Brazilian locally adapted taurine cattle breeds were used to detect genomic regions under selective pressure. Within-population and cross-population statistics were combined separately in a single score using the de-correlated composite of multiple signals (DCMS) method. Putative sweep regions were revealed by assessing the top 1% of the empirical distribution generated by the DCMS statistics. Results A total of 33,328,447 biallelic SNPs with an average read depth of 12.4X passed the hard filtering process and were used to access putative sweep regions. Admixture has occurred in some locally adapted taurine populations due to the introgression of exotic breeds. The genomic inbreeding coefficient based on runs of homozygosity (ROH) concurred with the populations’ historical background. Signatures of selection retrieved from the DCMS statistics provided a comprehensive set of putative candidate genes and revealed QTLs disclosing cattle production traits and adaptation to the challenging environments. Additionally, several candidate regions overlapped with previous regions under selection described in the literature for other cattle breeds. Conclusion The current study reported putative sweep regions that can provide important insights to better understand the selective forces shaping the genome of the indicine and Brazilian locally adapted taurine cattle breeds. Such regions likely harbor traces of natural selection pressures by which these populations have been exposed and may elucidate footprints for adaptation to the challenging climatic conditions.

Thirty six Nellore steers, with an average initial age and weight of 20 months and 360 kg, were fed the same diet in three levels of dry matter intake: ad libitum or in two quantitative restriction levels 75g DM/kg BW0.75 or 60g DM/kg BW0.75 during 58 days (Phase 1) to evaluate the effects of feed restriction on performance and composition of weight gain in restriction and re-alimentation phases. All steers were fed ad libitum for 78 days (Phase 2). Body composition was estimated with the marker deuterium oxide, which allowed repeated measurements of the same animal and to study of its response to re-alimentation. Average daily gain in restriction phase reflected different weight gain rates provided by feed levels, being them 0.288 kg, 0.656 kg and 1.169 kg, respectively for 60g DM/ BW0.75, 75g DM/ BW0.75 and ad libitum. Feed efficiency raised according to level of feed intake in Phase 1 and no differences between treatments were observed in Phase 2. Dry matter digestibility did not differ between treatments in both Phase 1 and Phase 2, but was different between Phases for the same treatment with 78.8% in Phase 1 and 68.7% in Phase 2 for the treatment 60 g DM/BW0.75 and 77.8% in Phase 1 and 71.3% in Phase 2 for treatment 75 g DM/BW0.75. The empty weight gain, the daily deposition of water, ether extract, protein, ash and energy had an increase in their deposition according to the elevation of the level of feed intake in Phase 1. In Phase 2 there was no difference between the levels of diet intake for empty weight gain, chemical components deposition and retained energy in the gain. A short period of quantitative feed restriction imposed to Nellore steers could be used in beef cattle production system.

The aim of this study was to estimate, using data mining, which microclimate and behavioral variables affect the behavior of animals to seek shaded or sunny areas. The experiment was carried out between January and May 2016 in an integrated crop-livestock-forest system. In this system, we defined two different areas: shaded and sunny. Microclimatic variables (At, BGt, RH, and WS) were measured in each area on 4 consecutive days per month. With these variables, we determined the bioclimatic indicators (THI, BGHI, HLI, MRT, RTL, and ETI). In addition, we calculated the absolute difference (Δ) by subtracting the value recorded in shaded areas from the value recorded in sunny areas for all microclimatic variables and bioclimatic indicators, except for WS. The behaviors (grazing, ruminating, and other activities), posture (standing or lying), and use of areas (shaded or sunny) of 38 Zebu cattle were recorded on 2 consecutive days per month. The data mining technique was applied for analysis in a classification task. The model correctly classified 76% of the instances with a Kappa statistic of 0.51 after features selection from the database. The ΔBGt was the most important feature in the model to classify the decision of Zebu cattle to seek another area or remain in a determined area. The model was built with seven classification rules, being one simple rule, composed of the interaction between ΔBGt and rumination; and other more complex rules, composed of the interactions among the ΔBGt, WS, and rumination. The preference of Zebu cattle to seek or remain in shaded or sunny areas was influenced by eight features: rumination, drinking water, WS, ΔBGt, MRT in shade, BGHI in sun, ΔBGHI, and HLI in sun. [ABSTRACT FROM AUTHOR]

Los objetivos fueron evaluar el efecto de la raza sobre el polimorfismo genético de la kappa-caseína, la composición fisicoquímica de la leche y del queso Coalho, y el rendimiento del queso, así como evaluar el efecto de diferentes periodos de almacenamiento sobre la aceptación sensorial del queso Coalho obtenido a partir de leche de vacas Guzerat, Gyr y Sindi. Se seleccionaron veinte (20) vacas de razas cebú y se obtuvieron sus valores de frecuencia del polimorfismo genético de la kappa-caseína. La leche se sometió a un análisis de grasa, proteína, lactosa, sólidos no grasos y sólidos totales, conductividad eléctrica y cuenta de células somáticas. Los quesos se sometieron a análisis de grasa, proteína, sólidos totales, pH, humedad y rendimiento (g ST/L). Se evaluaron los atributos apariencia, aroma, textura y sabor en los días 1, 25 y 46 de almacenamiento. La frecuencia total fue de 0.70 para el genotipo AA y 0.30 para el genotipo AB. No hubo diferencias significativas en la composición de la leche entre las razas estudiadas. Sin embargo, hubo diferencias en la composición fisicoquímica (exceptuando la proteína) y el rendimiento de los quesos; pero todas las razas mostraron un rendimiento real similar. El periodo de almacenamiento tuvo efectos observables sobre los atributos sensoriales de los quesos en las diferentes razas, con la excepción de su apariencia. La leche de las razas Guzerat, Gyr y Sindi constituye una excelente materia prima para la producción de cuajada y garantiza una aceptación sensorial satisfactoria del producto a los días 1, 25 y 46 de almacenamiento.

The goal of this study was to evaluate the rejection rates of Zebu bulls during behavioral assessment (libido and serving ability) and the importance of this step in bull breeding soundness evaluation (BBSE). A total of 1,534 bulls reared in the state of Rio Grande do Sul, Brazil, of Nelore (1,340), Brahman (76), Guzerá (98), and Tabapuã (210) breeds were evaluated. The evaluation consisted of four steps. Step I was the general physical examination, Step II genital tract examination, Step III semen evaluation, and Step IV behavioral assessment of libido and the ability to complete copulation. To evaluate the relationship between the binary variables of approved or rejected during different steps of the BBSE, and age groups (young and mature bulls), chi-square tests and logistic regression were used. The general rejection rates in the BBSE were 5.64% and 15.20% for young and mature Zebu bulls, respectively. ¬Problems with the sexual behavior (libido and/or serving ability) of bulls accounted for the rejection of 0.46% and 2.29% of young and mature Zebu bulls, respectively. The lack of libido and serving ability was shown to be an important problem concerning the total number of possible causes of Zebu bull rejection during the BBSE. This result suggests that the behavioral step should be performed regularly, rather than being complementary to the standard BBSE in Zebu cattle.

XIST, in association with the shorter ncRNA RepA, are essential for the initiation of X chromosome inactivation (XCI) in mice. The molecular mechanisms controlling XIST and RepA expression are well characterized in that specie. However, little is known in livestock. We aimed to characterize the DNA methylation status along the 5’ portion of XIST and to characterize its transcriptional profile during early development in cattle. Three genomic regions of XIST named here as promoter, RepA and DMR1 had their DNA methylation status characterized in gametes and embryos. Expression profile of XIST was evaluated, including sense and antisense transcription. Oocytes showed higher levels of methylation than spermatozoa that was demethylated. DMR1 was hypermethylated throughout oogenesis. At the 8–16-cell embryo stage DMR1 was completed demethylated. Interestingly, RepA gain methylation during oocyte maturation and was demethylated at the blastocyst stage, later than DMR1. These results suggest that DMR1 and RepA are transient differentially methylated regions in cattle. XIST RNA was detected in matured oocytes and in single cells from the 2-cell to the morula stage, confirming the presence of maternal and embryonic transcripts. Sense and antisense transcripts were detected along the XIST in blastocyst. In silico analysis identified 63 novel transcript candidates at bovine XIST locus from both the plus and minus strands. Taking together these results improve our understanding of the molecular mechanisms involved in XCI initiation in cattle. This information may be useful for the improvement of assisted reproductive technologies in livestock considering that in vitro conditions may impair epigenetic reprogramming.

The aims were to evaluate the effect of breed on the genetic polymorphism kappa-casein, physicochemical composition of milk and Coalho cheese, and on cheese yield; and to evaluate the effect of different periods of storage on sensorial acceptance of the Coalho cheese obtained from milk of Guzerat, Gyr and Sindi cows. Twenty (20) cows of Zebu breeds were selected, from which it was obtained the frequency values of the genetic polymorphism kappa-casein. Milk were submitted to fat, protein, lactose, non-fat solids and total solids, electrical conductivity analysis and somatic cell count. Cheeses were submitted to fat, protein, total solids, pH, moisture and yield (g TS/L) analysis. Attributes appearance, aroma, texture and flavor were judged at the 1st, 25th and 46th day of storage. There was a total frequency of 0.70 for genotype AA, 0.30 for genotype AB. There was no significant difference in milk composition among the studied breeds. However, there were differences in the physicochemical composition (with the exception of the protein) and the yield of the cheeses, but all the breeds showed a similar real yield. It was found effect of the storage period on the cheeses sensory attributes in the different breeds, with the exception of the appearance. The milk of the Guzerat, Gyr and Sindi breeds constitute an excellent raw material for the production of curd cheese and ensures a satisfactory sensorial acceptance of the product at the 1st, 25th and 46th days of storage. [ABSTRACT FROM AUTHOR]

The objective of this study was to evaluate the fecal metabolome of Nelore bulls (Bos taurus indicus) fed pre- and post-feedlot diets. In pre-feedlot, 21 animals belonging to the Nelore Qualitas breeding program aged 666 ± 68 days old, and 534.5 ± 34.2 kg of body weight were allocated to one pen for 15 days. The prefeedlot diet contained corn silage (80%) and sugarcane bagasse (20%). Next, the bulls (546.0 ± 41.2 kg of body weight) were submitted into a finishing stage in feedlot for 56 days. During the post-feedlot diet contained wet grain corn (44.6%), corn silage (27.6%), citrus pulp (11.9%), peanut bran (8%), sugarcane bagasse (4.9%), premix (1.8%) and urea (1.2%) twice a day with ad libitum access in Intergado electronic troughs (Intergado Ltda., Contagem, Minas Gerais, Brazil). Pre- and postfeedlot fecal samples were collected directly from the rectal ampulla of each bovine and stored in a -80℃ freezer for metabolomic assays by Nuclear Magnetic Resonance analysis (1H NMR). The metabolites were identified, quantified and data processing using the Chenomx NMR Suite 8.6 (Chenomx Inc., Edmonton, AB, Canada) and MetaboAnalyst 5.0 (http://www. metaboanalyst.ca). We identified and quantified 57 and 55 metabolites in the fecal samples of the bulls fed preand post-feedlot diet, respectively. We observed that 39 metabolites differed (P < 0.05) between pre- and post-feedlot diet. The 2-phenylpropionate, caprylate, fumarate, deaminotyrosine, gamma-glutamyl phenylalanine, NADH, thymidine and pantothenate were observed only in the pre-feedlot diet. However, acetamide, 2-oxoglutarate, uracil, xanthine, trimethylamine and demethyl sulfone were consumed exclusively postfeedlot diet. Our multivariate analyses demonstrated that the fecal metabolite profiles of the Nelore bulls fed pre- and post-feedlot diet were different. The first two components of principal component analysis (PCA) explained 86.1% of the total data variance (PC1 = 77.6%; PC2 = 8.5%). Likewise, the partial least squares discriminant analysis (PLS-DA) explained 85.5% of the data variance with the first two components (component 1 (74.4%) vs. component 2 (8.1%)). Three fecal metabolites (acetate, butyrate, and propionate) with variable importance in the projection (VIP scores over 1.0; P < 0.05) were greater in animals fed post-feedlot diet. Additionally, metabolome profile offers information on the main metabolic pathways, and five pathways were identified as different (P < 0.05 and impact >2) in the fecal samples that bulls fed pre and post feedlot diets: pyruvate metabolism (bta00620); glycine, serine and threonine metabolism (bta00260); synthesis and degradation of ketone bodies (bta00088); histidine metabolism (bta00340) and biosynthesis of phenylalanine, tyrosine and tryptophan (bta00400). Our results suggest that pre- and post-feedlot diets modify the fecal metabolome profile of Nelore bulls. In addition, further studies about metabolic effects of diets are required for a better understanding of these influence on Nelore bulls. [ABSTRACT FROM AUTHOR]

Beef is a source of essential fatty acids (EFA), linoleic (LA) and alpha-linolenic (ALA) acids, which protect against inflammatory and cardiovascular diseases in humans. However, the intramuscular EFA profile in cattle is a complex and polygenic trait. Thus, this study aimed to identify potential regulatory genes of the essential fatty acid profile in Longissimus thoracis of Nellore cattle finished in feedlot. Forty-four young bulls clustered in four groups of fifteen animals with extreme values for each FA were evaluated through differentially expressed genes (DEG) analysis and two co-expression methodologies (WGCNA and PCIT). We highlight the ECHS1, IVD, ASB5, and ERLIN1 genes and the TF NFIA, indicated in both FA. Moreover, we associate the NFYA, NFYB, PPARG, FASN, and FADS2 genes with LA, and the RORA and ELOVL5 genes with ALA. Furthermore, the functional enrichment analysis points out several terms related to FA metabolism. These findings contribute to our understanding of the genetic mechanisms underlying the beef EFA profile in Nellore cattle finished in feedlot.

A intensificação dos sistemas de produção de bovinos de corte, visando o aumento dos índices produtivos, exige a utilização de tecnologias que favoreçam a exploração racional da pecuária. Dentre os indicadores zootécnicos a eficiência reprodutiva destaca-se por estar intimamente associada as condições de nutrição, manejo e sanidade, que, juntamente com o padrão genético influenciam o desfrute geral do rebanho. Dentre as raças zebuínas Bos taurus indicus utilizadas nos sistemas de produção de carne do Brasil, a raça Nelore ocupa lugar de destaque, principalmente pela adaptação ao clima tropical. Entretanto, animais deste grupo genético, costumam ser sexualmente mais tardios que os de raças taurinas Bos taurus taurus, mesmo quando criados em condições semelhantes. E dentro desse contexto a idade ao primeiro parto é um dos aspectos que refletem diretamente na determinação da eficiência reprodutiva do rebanho. Partindo desse pressuposto, a inclusão de novilhas em idades mais jovens a reprodução, propiciando melhorias na lucratividade. Essa revisão tem como objetivo abordar alguns aspectos relacionados ao desenvolvimento reprodutivo em novilhas Nelore, tais como influência do peso vivo, nutrição, hormonioterapia e morfologia do trato reprodutivo. E de acordo com levantamento bibliográfico apresentado nessa revisão, conclui-se que a obtenção da puberdade em novilhas Nelore é de ordem multifatorial e varia em função do manejo geral do rebanho e da composição genética dos animais. Sendo importante salientar que a genética, peso vivo, nutrição e o manejo reprodutivo estão intimamente relacionados à idade a puberdade e ao primeiro parto.

Nelore heifers usually begin their reproductive life at ⩾24 months of age mainly due to suboptimal nutritional conditions and genetics. This study aimed to determine the effect of expected progeny difference (EPD) for age at first calving and average daily gain (ADG) on puberty in Nelore (Bos taurus indicus) heifers. A total of 58 weaned heifers (initial BW=174±6 kg; age=9±1 months) were allocated into 28 feedlot pens. Heifers were born from four sires, of which two had low EPD for age at first calving (L; n=33) and two had high EPD for age at first calving (H; n=25). Then, heifers of each EPD were randomly assigned to high ADG (HG; 0.7 kg) or low ADG (LG; 0.3 kg), resulting in four treatments: heifers from L sires were submitted to either HG (LHG; n=17) or LG (LLG; n=16), and heifers from H sires were submitted to either HG (HHG; n=12), or LG (HLG; n=13). The HG heifers were fed a 75% grain diet, whereas the LG heifers received 93% of forage in their diet. Blood samples were collected at 9, 14, 18, 24 and 28 months of age for IGF1 and leptin determination. There was a treatment effect (P

Abstract: The objective of this work was to quantify heat shock proteins (HSP) 27 and 70 in the Longissimus dorsi muscle of cattle during aging and to check their potential as biomarkers for meat quality. A total of 191 steers ½ South African Simmental x ½ Nellore (16-18 months, 391.7±99.7 kg), castrated, and feedlot finished were used. Meat quality was measured by pH, color, cooking loss, and shear force (SF) at 1 and 14 days of aging time. HSP27 and HSP70 were quantified according to the SF values in the more and less tender meat groups, with 20 samples each, for each aging time. HSP27 concentrations in more and less tender meat decrease from 1 to 14 days of aging, and do not differ when evaluated at the same period. HSP70 concentrations in more tender meat increase during aging, and, in less tender meat, there is no difference between periods or at the same period. The correlations between the HSP27 and HSP70 concentrations and meat quality characteristics are low for South African Simmental x Nellore, which indicate the low potential of HSP as biomarkers for these traits, especially for meat tenderness.

Abstract Background Commercial cuts yield is an important trait for beef production, which affects the final value of the products, but its direct determination is a challenging procedure to be implemented in practice. The measurement of ribeye area (REA) and backfat thickness (BFT) can be used as indirect measures of meat yield. REA and BFT are important traits studied in beef cattle due to their strong implication in technological (carcass yield) and nutritional characteristics of meat products, like the degree of muscularity and total body fat. Thus, the aim of this work was to study the Longissimus dorsi muscle transcriptome of Nellore cattle, associated with REA and BFT, to find differentially expressed (DE) genes, metabolic pathways, and biological processes that may regulate these traits. Results By comparing the gene expression level between groups with extreme genomic estimated breeding values (GEBV), 101 DE genes for REA and 18 for BFT (false discovery rate, FDR 10%) were identified. Functional enrichment analysis for REA identified two KEGG pathways, MAPK (Mitogen-Activated Protein Kinase) signaling pathway and endocytosis pathway, and three biological processes, response to endoplasmic reticulum stress, cellular protein modification process, and macromolecule modification. The MAPK pathway is responsible for fundamental cellular processes, such as growth, differentiation, and hypertrophy. For BFT, 18 biological processes were found to be altered and grouped into 8 clusters of semantically similar terms. The DE genes identified in the biological processes for BFT were ACHE, SRD5A1, RSAD2 and RSPO3. RSAD2 has been previously shown to be associated with lipid droplet content and lipid biosynthesis. Conclusion In this study, we identified genes, metabolic pathways, and biological processes, involved in differentiation, proliferation, protein turnover, hypertrophy, as well as adipogenesis and lipid biosynthesis related to REA and BFT. These results enlighten some of the molecular processes involved in muscle and fat deposition, which are economically important carcass traits for beef production.

Nelore is the most economically important cattle breed in Brazil, and the use of genetically improved animals has contributed to increased beef production efficiency. The Brazilian beef feedlot industry has grown considerably in the last decade, so the selection of animals with higher growth rates on feedlot has become quite important. Genomic selection (GS) could be used to reduce generation intervals and improve the rate of genetic gains. The aim of this study was to evaluate the prediction of genomic-estimated breeding values (GEBV) for average daily weight gain (ADG) in 718 feedlot-finished Nelore steers. Analyses of three Bayesian model specifications [Bayesian GBLUP (BGBLUP), BayesA, and BayesCπ] were performed with four genotype panels [Illumina BovineHD BeadChip, TagSNPs, and GeneSeek High- and Low-density indicus (HDi and LDi, respectively)]. Estimates of Pearson correlations, regression coefficients, and mean squared errors were used to assess accuracy and bias of predictions. Overall, the BayesCπ model resulted in less biased predictions. Accuracies ranged from 0.18 to 0.27, which are reasonable values given the heritability estimates (from 0.40 to 0.44) and sample size (568 animals in the training population). Furthermore, results from Bos taurus indicus panels were as informative as those from Illumina BovineHD, indicating that they could be used to implement GS at lower costs.

Anti-Müllerian Hormone (AMH) is a protein expressed in the gonads and related to ovarian follicular development. The aim of this study was to investigate the presence of polymorphisms in the AMH gene in a Nelore herd to analyze the genetic constitution of this population and to perform association studies with early pregnancy occurrence (EPO) and age at first calving (AFC). Phenotypic data consisted of verification of early pregnancy and age at first calving of 197 unrelated heifers exposed to the mating season and aged between 15 and 17 months (precocious group) and 24 months (non-precocious group). The "precocious" group consisted of 67 heifers with age at first calving of 26.5 ± 0.59 months, and the "non-precocious" group was composed of 130 heifers with age at first calving of 36.4 ± 0.99 months. All five exons of the AMH gene were amplified by Polymerase Chain Reaction (PCR) and sequenced. A total of three SNPs were identified in this study, all of them located in exon 5 (rs527023314, rs722016629, and rs134387246), the latter one positioned in the stop codon. All three SNPs identified in exon 5 characterized synonymous mutations. Only SNP rs134387246 exhibited a significant value (P ? 0.10) for EPO and AFC. The association study of SNP rs134387246 revealed an over-dominance effect (P = 0.056), and no additive effect was observed (P = 0.67). A reduction of 2.5 months (75 days) in the age at first calving of heterozygous heifers for the SNP rs134387246 was observed. For the first time, polymorphisms of the AMH gene were described in Nelore heifers and associated with sexual precocity traits.

A inseminação artificial em tempo fixo (IATF) é considerada uma biotecnologia reprodutiva capaz de promover o aumento dos índices reprodutivos, desempenhando efeito significativo sobre a eficiência bioeconômica da propriedade. Contudo, o sucesso da IATF é dependente de vários fatores que afetam diretamente a taxa de prenhez. Este trabalho tem como objetivo avaliar o efeito da IATF sobre a fertilidade de fêmeas Nelore da mesorregião Sudeste do Pará e verificar a influência de alguns fatores que podem comprometer a taxa de prenhez. Baseado em um estudo de campo, foram coletadas as informações das fichas de controle reprodutivo de 9.455 fêmeas Nelore pertencentes a nove fazendas e que foram submetidas ao mesmo protocolo de inseminação. As variáveis consideradas foram: fazenda, categoria animal, reutilização do dispositivo intravaginal de progesterona, escore da condição corporal, sêmen do touro e inseminador. A taxa de prenhez foi de 53,4% (5.052 de 9.455), havendo associação entre as fazendas (p < 0,05), com resultados que variaram de 46,8% a 63,1%. A categoria animal afetou a taxa de prenhez (p < 0,05) de nulíparas, primíparas e pluríparas (50,2, 47,2 e 56,0%, respectivamente). Não houve diferença (p > 0,05) quanto à reutilização do dispositivo intravaginal de progesterona de primeiro, segundo, terceiro e quarto uso, com as respectivas taxas de 54,3%, 53,1%, 53% e 51,2%. De acordo com o escore de condição corporal (p < 0,05), fêmeas de escore 3 e 3,25 apresentaram maiores taxas de prenhez, com 59,8% e 54,8%, respectivamente. Em relação à variável touro, 14 foram responsáveis por taxa de prenhez acima de 50%; três com resultados acima de 60% e um touro com 38,3% (p < 0,05). Houve diferença entre a taxa de prenhez e o inseminador (p < 0,05), obtendo resultados que variaram de 45,5% a 71,4%. As melhorias nos sistemas de manejo de cada fazenda poderão refletir de modo expressivo no aumento da taxa de prenhez dos rebanhos da região do Sudeste paraense.

Adaptation is a relevant characteristic to be understood in livestock animals in order to maintain and raise productivity. In Brazil, the Nellore beef cattle are widely disseminated and well-adapted breed that present good thermoregulatory characteristics for tropical environment conditions. Conversely, the physiological and cellular mechanisms required for thermoregulation and thermotolerance in this breed are still limited. The aim of this study was to comprehend the heat loss efficiency at the whole animal level and heat shock response at the cellular level of Nellore cows in tropical climate conditions. Healthy purebred Nellore cows were classified according to their capacity to lose body heat as Efficient or Inefficient based on vaginal temperature which was continuously monitored by data-loggers. Rectal, tail, and ocular temperatures, sweating rate, and respiratory frequency were collected to assess other thermoregulatory responses. Peripheral mononuclear cells were used for gene expression of heat shock proteins 60, 70, and 90 induced by in vitro heat treatments at 38, 40, and 42 °C. In our findings, the Efficient cows presented higher sweating rates compared to Inefficient cows that presented higher rectal temperature with greater amplitude of vaginal temperature profile. Transcription of the HSP genes was stable at 38 and 40 °C and decreased for all HSP genes at 42 °C. In conclusion, the Nellore efficiency to lose heat was mainly associated with their sweating capacity and cellular thermotolerance confirmed by the maintenance of heat shock proteins transcripts under heat stress. Taken together, this knowledge contributes as a future key for genetic selection of adapted animals. [ABSTRACT FROM AUTHOR]

A total of 34 prepuberal Nellore males were divided into three groups: control - animals without any procedure (n = 11); blocked - with bilaterally incisors ducts obstructed (n = 10); castrated - with bilateral orchiectomy (n = 13). This study aimed to evaluate the effect of blocking the vomeronasal organ (VNO) in qualitative and quantitative characteristics of the carcass. Also, this study aimed to evaluate testosterone and insulin-like growth factor (IGF-I) serum concentration, and the histological architecture of the OVN. Blood samples were taken every three months during two daily collections (morning and afternoon), totalizing five evaluations. It was observed higher (P<0.05) final body weight (control= 494.1 ± 28.71; blocked = 500.6 ± 23.6; castrated = 468.3 ± 21.8 kg) at the control and blocked groups. Carcass finishing was higher in castrated animals (P <0.05), while carcass yield did not differ between treatments (P> 0.05). It was observed a reduction (P<0.05) of the VNO sensory epithelium height in blocked and castrated groups compared with control group. It was registered lower (P<0.05) serum testosterone concentration in blocked group at the fourth and fifth blood collection (afternoon). It was concluded that the obstruction of the incisive ducts reduced the sensorial stimuli for the OVN, which, in turn, promoted a change in the serum concentration of testosterone, without altering the weight gain of the animals, but did not promote improvement in the quality of the carcass under the conditions of this study. [ABSTRACT FROM AUTHOR]

Inbreeding depression is caused by breeding between closely related individuals and can have a significant negative impact on cattle production. It can be estimated at the population level using pedigree analysis or molecular markers. Such estimations can then be used to better manage the genetic resources of herds. The objective of this study was to evaluate genetic variability and the influence of inbreeding depression on productive traits in 45 785 animals Nellore cattle (polled variety) from Brazil. Inbreeding depression was determined by fitting four regression models (linear, quadratic, exponential and Michaelis-Menten) to the errors generated by the animal model. The traits studied were weight at 205 (W205), 365 (W365) and 550 (W550) days of age. The effective number of founders (fe) and ancestors (fa) was 288 and 283, respectively, with 173 ancestors explaining 50% of the genetic variability in the population. Inbreeding depression effects were identified on all growth traits (W205, W365, and W550), demonstrating significant losses in evaluated weight means. For each 1% increase in inbreeding there was a depression of about 0.14% or 0.24 kg (W205), 0.12% or 0.29 kg (W365) and 0.09% or 0.29 kg (W550). Exponential and Michaelis-Menten models were similarly efficient predictors for all the traits (P<0.01). We conclude that Nellore cattle in Northeastern Brazil presents low genetic variation and the relationship between inbreeding and depressed productivity in this breed is not linear, with the greatest effects occurring when endogamy is above 20%. To change this scenario, it is important to use a high number of male breeders, mainly young individuals of high breeding value, and improvement of reproductive indexes of females. To achieve this goal, a traditional mating system focused on the utilization of a few (and famous) male breeders should be avoided by both farmers and technicians. [ABSTRACT FROM AUTHOR]

XIST, in association with the shorter ncRNA RepA, are essential for the initiation of X chromosome inactivation (XCI) in mice. The molecular mechanisms controlling XIST and RepA expression are well characterized in that specie. However, little is known in livestock. We aimed to characterize the DNA methylation status along the 5' portion of XIST and to characterize its transcriptional profile during early development in cattle. Three genomic regions of XIST named here as promoter, RepA and DMR1 had their DNA methylation status characterized in gametes and embryos. Expression profile of XIST was evaluated, including sense and antisense transcription. Oocytes showed higher levels of methylation than spermatozoa that was demethylated. DMR1 was hypermethylated throughout oogenesis. At the 8–16-cell embryo stage DMR1 was completed demethylated. Interestingly, RepA gain methylation during oocyte maturation and was demethylated at the blastocyst stage, later than DMR1. These results suggest that DMR1 and RepA are transient differentially methylated regions in cattle. XIST RNA was detected in matured oocytes and in single cells from the 2-cell to the morula stage, confirming the presence of maternal and embryonic transcripts. Sense and antisense transcripts were detected along the XIST in blastocyst. In silico analysis identified 63 novel transcript candidates at bovine XIST locus from both the plus and minus strands. Taking together these results improve our understanding of the molecular mechanisms involved in XCI initiation in cattle. This information may be useful for the improvement of assisted reproductive technologies in livestock considering that in vitro conditions may impair epigenetic reprogramming. [ABSTRACT FROM AUTHOR]

In the present study, the effects of genetic group and heterosis on body measurements of purebreds (Charolais - C and Nellore - N), first-generation crossbreds (G1) (1/2C1/2N and 1/2N1/2C), and second-generation crossbreds (G2) (3/4C1/4N and 3/4N1/4C) males from rotational crossbreeding were evaluated at 8, 12, 18, and 24 months of age. Among the purebreds, the Nellore displayed greater rump height than the Charolais. The Charolais had greater thoracic perimeter than the Nellore, however this difference decreased gradually with advancing age, being equal between the two genetic groups at 24 months. For width of the rump, ischial opening and thoracic perimeter crossbred animals showed higher values than the purebred animals at all ages, but less pronounced at eight months of age. For all morphometric measurements, with exception of rump height, the differences of crossbreds males in relation to the purebreds, were more evident in relation to the Nellore. Heterosis was significant for morphometric measurements in male beef cattle. Morphometric measurements showed high correlation with each other and with body weight, thereby indicating that they are good indicators of body development.

The aim of this study was to evaluate the endometrial inflammatory response of nine Zebu cows inoculated through uterine infusion with 30 mL of inactivated Escherichia coli suspension (1 x 109 UFC/mL) and nine with 30 mL of sterile phosphate buffered saline. Endometrial biopsies were performed before and after the inoculations during estrus, and ten days later in the diestrus phase. Neutrophilic infiltrates were observed in 88.8% of samples from the E. coli group in estrus phase and demonstrated different degrees of endometrial inflammation. This study characterizes a suitable model for studying endometritis in cattle.

Objetivou-se categorizar a contagem de folículos antrais (CFA) em fêmeas Nelore e posteriormente determinar o efeito de alguns parâmetros reprodutivos e do escore de condição corporal (ECC) sobre a CFA, assim como, comparar a taxa de concepção entre fêmeas com distintas categorias de CFA submetidas a um protocolo de inseminação artificial em tempo fixo (IATF). Para tanto, 595 fêmeas Nelore foram submetidas a um protocolo para IATF; no D4 do protocolo, foi determinado o diâmetro ovariano (DOV), a presença de corpo lúteo (CL) e a CFA. As inseminações foram executadas utilizando-se sêmen criopreservado. O diagnóstico de gestação foi realizado por ultrassonografia. As fêmeas foram dividas conforme a categoria animal, dias pós-parto (DPP), DOV, presença de CL e ECC. De acordo com a média da CFA, sugeriu-se uma categorização da CFA, a qual considerou baixa CFA ≤32, intermediária CFA entre 32 e 48 e alta CFA ≥48 folículos/animal. A categoria animal, os DPP e o ECC não afetaram a CFA dos animais. Entretanto, houve diferença entre a média de CFA na classe com maior DOV em comparação com as demais. A presença de CL influenciou na CFA dos animais. Em relação à fertilidade, não foi demonstrado efeito da CFA sobre a taxa de concepção das fêmeas submetidas à IATF. Os resultados encontrados sugerem que a CFA parece ser uma característica intrínseca, mantendo-se constante independente do status fisiológico do animal. Houve uma inter-relação positiva entre o DOV e CFA. A presença de CL influenciou a CFA. No entanto, a CFA não afeta a performance reprodutiva em programas de IATF

Since predominant high temperatures could alter thermic equilibrium, the knowledge of dairy cattle thermoregulation characteristics on tropical environment is very important. The higher energy consume to maintain homeothermy could damage production and reproduction. Therefore, this revision aimed to analyze some thermoregulatory characteristics and fur of dairy cattle housed in tropical environment. The maximum and minimum values of rectal temperature found was 41.14°C (½ Gir ½ Holstein) and 37.09°C (lactating cows in the morning), breathing rate of 137.12mov/min (½ Gir ½ Holstein) and 22mov.min-1 (Holstein and Girolanda), sweating rate of 239.42g.m-2 .h-1 (½ Gir ½ Holstein) and 90.5g.m-2 .h-1 (¾ Holstein Zebu), surface temperature of 44.0°C (Holstein at 12 hours) and 22.0°C (½ Gir ½ Holstein, at 6am), hair coat thickness of 5.31mm ( ½ Gir ½ Holstein) and 1.93mm (Holstein), length of hair coat of 16.11mm (Holstein) and 8.08mm (Caracu Caldeano). The rectal temperature and breathing rate of dairy cattle raised on tropical environment could be altered by intrinsic and extrinsic factors. The hair coat thickness and length are lower on summer and spring compared with fall and winter.

This study aimed to estimate the phenotypic correlations between such characteristics as growth, scrotal circumference, carcass evaluated by ultrasound, and the morphological characteristics assessed by visual scores of young Nellore bulls evaluated in individual performance tests. The data obtained from 110 young Nellore bulls, participants in the 1st and 2nd Test of Individual Performance of Bulls, at the Federal University of Uberlândia were used in this study. The contemplated characteristics were daily weight gain (kg/day), initial weight (kg), final weight (kg), initial scrotal circumference (cm), final scrotal circumference (cm), area of Longissimus muscle (cm²), carcass finish (mm), fat thickness (mm), thickness of rump fat (mm), and the morphological characteristics assessed by visual scores such as body structure, early maturity and muscle. There were positive associations of low to medium intensity between all traits evaluated, except among weight characteristics at the beginning and end of the performance tests, and among the fat thickness and thickness of rump fat characteristics with carcass finish. Traits evaluated showed no negative correlations, indicating that these may be placed together in selection indices.

Feet and leg conformation is evaluated as a subset of conformational structure traits in dairy and beef cattle and is related to the feet and leg quality that can compromise the animals' productive performance and longevity. The aim of this study was to perform a genome-wide association study (GWAS) of two traits related to feet and leg conformation in Nellore cattle to identify chromosomal regions related to the expression of these traits. Phenotypic and pedigree data from 104,725 animals and genotypes from 1,435 animals and 407,730 SNPs were used. Feet and leg structure was evaluated as a binary trait (FL1) to identify yearling animals with feet and leg problems or as categorical score (FL2) to assess the overall quality of their feet and leg. The top ten 1-Mb windows that explained the largest proportion of the total genetic variance were identified and functional enrichment analyses were performed. The 10 windows with large effects obtained for FL1 are located on chromosomes 1, 2, 6, 7, 8, 10, and 14, and together explained 8.96% of the additive genetic variance. For FL2, these windows are located on chromosomes 1, 7, 10, 11, 18, 20, 22, 28, and 29, explaining 8.98% of the additive genetic variance. Several candidate genes were identified, including DLX2 which is associated with osteogenic differentiation, IL-1ß and IL-1A associated with some properties of articular cartilage, PiT1 which plays an important role in bone physiology, and CTSL associated with rheumatoid arthritis. The results presented here should contribute to a better understanding of the genetic and physiologic mechanisms regulating both traits, and identifies candidate genes for future investigation of causal mutations. [ABSTRACT FROM AUTHOR]

Nelore heifers usually begin their reproductive life at ≥24 months of age mainly due to suboptimal nutritional conditions and genetics. This study aimed to determine the effect of expected progeny difference (EPD) for age at first calving and average daily gain (ADG) on puberty in Nelore (Bos taurus indicus ) heifers. A total of 58 weaned heifers (initial BW =174 ± 6 kg; age =9 ± 1 months) were allocated into 28 feedlot pens. Heifers were born from four sires, of which two had low EPD for age at first calving (L;n =33) and two had high EPD for age at first calving (H;n =25). Then, heifers of each EPD were randomly assigned to high ADG (HG; 0.7 kg) or low ADG (LG; 0.3 kg), resulting in four treatments: heifers from L sires were submitted to either HG (LHG;n =17) or LG (LLG;n =16), and heifers from H sires were submitted to either HG (HHG;n =12), or LG (HLG; n =13). The HG heifers were fed a 75% grain diet, whereas the LG heifers received 93% of forage in their diet. Blood samples were collected at 9, 14, 18, 24 and 28 months of age for IGF1 and leptin determination. There was a treatment effect (P <0.01) on the proportion of heifers that attained puberty by 18 (62%, 0%, 0% and 0%), 24 (100%, 6%, 54% and 0%) or 36 (100%, 100%, 100% and 38%) months of age for LHG, LLG, HHG and HLG treatments, respectively. In addition, mean age at puberty was different across treatments (P <0.01). Heifers from the LHG achieved puberty at the earliest age when compared with cohorts from other treatments (18.1, 28.9, 23.9 and 34.5 months for LHG, LLG, HHG and HLG, respectively). Serum IGF1 concentrations were higher for L heifers compared with H cohorts at 9, 14, 18, 24 and 28 months of age (P <0.01; treatment x age interaction), whereas circulating leptin concentrations were higher (P <0.01; age effect) as heifers became older, regardless of the treatments. In conclusion, only Nelore heifers with favorable genetic merit for age at first calving were able to attain puberty by 18 months of age. In heifers with unfavorable genetic merit for age at first calving, supplementary feeding to achieve high ADG was unable to shift the age at puberty below 24 months. [ABSTRACT FROM AUTHOR]

When the environment on which the animals are raised is very diverse, selecting the best sires for different environments may require the use of models that account for genotype by environment interaction (G × E). The main objective of this study was to evaluate the existence of G × E for yearling weight (YW) in Nellore cattle using reaction norm models with only pedigree and pedigree combined with genomic relationships. Additionally, genomic regions associated with each environment gradient were identified. A total of 67,996 YW records were used in reaction norm models to calculate EBV and genomic EBV. The method of choice for genomic evaluations was single-step genomic BLUP (ssGBLUP). Traditional and genomic models were tested on the ability to predict future animal performance. Genetic parameters for YW were obtained with the average information restricted maximum likelihood method, with and without adding genomic information for 5,091 animals. Additive genetic variances explained by windows of 200 adjacent SNP were used to identify genomic regions associated with the environmental gradient. Estimated variance components for the intercept and the slope in traditional and genomic models were similar. In both models, the observed changes in heritabilities and genetic correlations for YW across environments indicate the occurrence of genotype by environment interactions. Both traditional and genomic models were capable of identifying the genotype by environment interaction; however, the inclusion of genomic information in reaction norm models improved the ability to predict animals' future performance by 7.9% on average. The proportion of genetic variance explained by the top SNP window was 0.77% for the regression intercept (BTA5) and 0.82% for the slope (BTA14). Single-step GBLUP seems to be a suitable model to predict genetic values for YW in different production environments. [ABSTRACT FROM AUTHOR]

The objective of this study was to evaluate the effect of the follicular wave synchronization method on the superovulatory response of Girolando embryo donors. Seven cows and five heifers were divided into three treatments according to the method of the follicular wave synchronization prior to superovulation. The donors were superovulated with eight FSH decreasing doses, adding 133 mg per animal. The superovulatory response was evaluated using an ultrasound device to quantify the number of corpora lutea. The number and quality of recovered structures were also evaluated. Animal category (cow or heifer) and genetic group influenced the superovulatory response, in which heifers showed a greater response (100% in all treatments) compared with cows, which showed 85.7%, 57.1% and 57.1% superovulatory response for standing estrus, GnRH and P4 + BE groups, respectively. The genetic group also showed influence on superovulatory response, in which the 3/8 animals had an average of 10.3 corpora lutea per donor compared with the 3/4 animals, which showed 4.9. The follicular wave synchronization treatments did not show differences in superovulatory response, recovered structures and viable structures. The treatment of follicular wave synchronization with GnRH or with P4 + BE can be used in Girolando donors with the same efficiency as the standing estrus group, and 3/8 Girolando heifers respond better to the superovulatory treatment.

The physiological changes that occur at puberty in heifers are objectives of study in order to better understand this phenomenon and to identify alternatives to achieve greater sexual precocity. Among the most important factors that influence puberty the leptin hormone and its receptor can be highlighted, as they are factors that perform communication between the nutritional status and the reproductive axis, and its participation in reproductive physiology is not fully understood. Therefore, the aim of this study was to determine the serum profile of the leptin hormone, to identify polymorphisms at exon 20 of the leptin receptor and associate them with the occurrence of puberty in heifers raised on pasture. We followed 56 heifers for 14 months and carried out the progesterone assay for determining the puberty occurrence, leptin dosage and sequencing of the leptin receptor gene for identifying the occurrence of SNP polymorphisms. Concentration of leptin was compared between the animals puberty with animals not puberty and the hormone of the animals puberty in the prepubertal and pubertal periods. After the identification of the polymorphism, the possible interactions of the mutation occurrence in the leptin receptor gene with the leptin concentrations and the puberty were analyzed. After analyzing, no observed correlation between the occurrence of the mutation in the leptin T945M receptor gene and leptin plasma concentrations and the puberty in heifers raised on pasture. [ABSTRACT FROM AUTHOR]

Background: Commercial cuts yield is an important trait for beef production, which affects the final value of the products, but its direct determination is a challenging procedure to be implemented in practice. The measurement of ribeye area (REA) and backfat thickness (BFT) can be used as indirect measures of meat yield. REA and BFT are important traits studied in beef cattle due to their strong implication in technological (carcass yield) and nutritional characteristics of meat products, like the degree of muscularity and total body fat. Thus, the aim of this work was to study the Longissimus dorsi muscle transcriptome of Nellore cattle, associated with REA and BFT, to find differentially expressed (DE) genes, metabolic pathways, and biological processes that may regulate these traits. Results: By comparing the gene expression level between groups with extreme genomic estimated breeding values (GEBV), 101 DE genes for REA and 18 for BFT (false discovery rate, FDR 10%) were identified. Functional enrichment analysis for REA identified two KEGG pathways, MAPK (Mitogen-Activated Protein Kinase) signaling pathway and endocytosis pathway, and three biological processes, response to endoplasmic reticulum stress, cellular protein modification process, and macromolecule modification. The MAPK pathway is responsible for fundamental cellular processes, such as growth, differentiation, and hypertrophy. For BFT, 18 biological processes were found to be altered and grouped into 8 clusters of semantically similar terms. The DE genes identified in the biological processes for BFT were ACHE, SRD5A1, RSAD2 and RSPO3. RSAD2 has been previously shown to be associated with lipid droplet content and lipid biosynthesis. Conclusion: In this study, we identified genes, metabolic pathways, and biological processes, involved in differentiation, proliferation, protein turnover, hypertrophy, as well as adipogenesis and lipid biosynthesis related to REA and BFT. These results enlighten some of the molecular processes involved in muscle and fat deposition, which are economically important carcass traits for beef production. [ABSTRACT FROM AUTHOR]

Nelore is the most economically important cattle breed in Brazil, and the use of genetically improved animals has contributed to increased beef production efficiency. The Brazilian beef feedlot industry has grown considerably in the last decade, so the selection of animals with higher growth rates on feedlot has become quite important. Genomic selection (GS) could be used to reduce generation intervals and improve the rate of genetic gains. The aim of this study was to evaluate the prediction of genomic-estimated breeding values (GEBV) for average daily weight gain (ADG) in 718 feedlot-finished Nelore steers. Analyses of three Bayesian model specifications [Bayesian GBLUP (BGBLUP), BayesA, and BayesCπ] were performed with four genotype panels [Illumina BovineHD BeadChip, TagSNPs, and GeneSeek High- and Low-density indicus (HDi and LDi, respectively)]. Estimates of Pearson correlations, regression coefficients, and mean squared errors were used to assess accuracy and bias of predictions. Overall, the BayesCp model resulted in less biased predictions. Accuracies ranged from 0.18 to 0.27, which are reasonable values given the heritability estimates (from 0.40 to 0.44) and sample size (568 animals in the training population). Furthermore, results from Bos taurus indicus panels were as informative as those from Illumina BovineHD, indicating that they could be used to implement GS at lower costs. [ABSTRACT FROM AUTHOR]

Beef cattle affected by feet and legs malformations (FLM) cannot perform their productive and reproductive functions satisfactorily, resulting in significant economic losses. Accelerated weight gain in young animals due to increased fat deposition can lead to ligaments, tendon and joint strain and promote gene expression patterns that lead to changes in the normal architecture of the feet and legs. The possible correlated response in the FLM due to yearling weight (YW) selection suggest that this second trait could be used as an indirect selection criterion. Therefore, FLM breeding values and the genetic correlation between FLM and yearling weight (YW) were estimated for 295,031 Nellore animals by fitting a linear-threshold model in a Bayesian approach. A genome-wide association study was performed to identify genomic windows and positional candidate genes associated with FLM. The effects of single nucleotide polymorphisms (SNPs) on FLM phenotypes (affected or unaffected) were estimated using the weighted single-step genomic BLUP method, based on genotypes of 12,537 animals for 461,057 SNPs. Twelve non-overlapping windows of 20 adjacent SNPs explaining more than 1% of the additive genetic variance were selected for candidate gene annotation. Functional and gene prioritization analysis of candidate genes identified six genes ( ATG7 , EXT1 , ITGA1 , PPARD , SCUBE3 , and SHOX ) that may play a role in FLM expression due to their known role in skeletal muscle development, aberrant bone growth, lipid metabolism, intramuscular fat deposition and skeletogenesis. Identifying genes linked to foot and leg malformations enables selective breeding for healthier herds by reducing the occurrence of these conditions. Genetic markers can be used to develop tests that identify carriers of these mutations, assisting breeders in making informed breeding decisions to minimize the incidence of malformations in future generations, resulting in greater productivity and animal welfare., Competing Interests: Author HN was employed by GenSys Associated Consultants. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Silva, Gondro, Fonseca, Silva, Vargas, Neves, Carvalho Filho, Teixeira, Albuquerque and Carvalheiro.)

O objetivo deste trabalho foi determinar o efeito do número de folículos antrais sobre as taxas de concepção de fêmeas Nelore, em programa de inseminação artificial em tempo fixo (IATF). Para isso, 481 fêmeas foram submetidas a um protocolo de IATF e avaliadas quanto à contagem de folículos antrais (CFA) e ao diagnóstico de gestação. Os animais foram agrupados nas categorias de CFA baixa (53). Não houve diferença entre as taxas de concepção obtidas nas categorias de CFA em IATF com uso de gonadotrofina coriônica.