5 results on '"Bates, R. O."'
Search Results
2. Genome-wide association study in an F2 Duroc x Pietrain resource population for economically important meat quality and carcass traits1
- Author
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Casiró, S., primary, Velez-Irizarry, D., additional, Ernst, C. W., additional, Raney, N. E., additional, Bates, R. O., additional, Charles, M. G., additional, and Steibel, J. P., additional
- Published
- 2017
- Full Text
- View/download PDF
3. Genome-wide linkage analysis of global gene expression in loin muscle tissue identifies candidate genes in pigs
- Author
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STEIBEL, J. P., BATES, R. O., ROSA, G. J. M., TEMPELMAN, R. J., RILINGTON, V. D., RAGAVENDRAN, A., RANEY, NANCY E., RAMOS, A. M., CARDOSO, F. F., EDWARDS, D. B., ERNST, C. W., JUAN PEDRO STEIBEL, Department of Animal Science, Michigan State University, RONALD O. BATES, Department of Animal Science, Michigan State University, GUILHERME J. M. ROSA, Department of Animal Sciences, University of Wisconsin, ROBERT J. TEMPELMAN, Department of Animal Science, Michigan State University, VALENCIA D. RILINGTON, Department of Animal Science, Michigan State University, ASHOK RAGAVENDRAN, Department of Animal Science, Michigan State University, NANCY E. RANEY, Department of Animal Science, Michigan State University, ANTONIO MARCOS RAMOS, Department of Animal Science, Michigan State University, FERNANDO FLORES CARDOSO, CPPSUL, DAVID B. EDWARDS, Department of Animal Science, Michigan State University, and ERNST, C. W., Department of Animal Science, Michigan State University.
- Subjects
Suíno ,Genética - Abstract
Background: Nearly 6,000 QTL have been reported for 588 different traits in pigs, more than in any other livestock species. However, this effort has translated into only a few confirmed causative variants. A powerful strategy for revealing candidate genes involves expression QTL (eQTL) mapping, where the mRNA abundance of a set of transcripts is used as the response variable for a QTL scan. Methodology/Principal Findings: We utilized a whole genome expression microarray and an F2 pig resource population to conduct a global eQTL analysis in loin muscle tissue, and compared results to previously inferred phenotypic QTL (pQTL) from the same experimental cross. We found 62 unique eQTL (FDR ,10%) and identified 3 gene networks enriched with genes subject to genetic control involved in lipid metabolism, DNA replication, and cell cycle regulation. We observed strong evidence of local regulation (40 out of 59 eQTL with known genomic position) and compared these eQTL to pQTL to help identify potential candidate genes. Among the interesting associations, we found aldo-keto reductase 7A2 (AKR7A2) and thioredoxin domain containing 12 (TXNDC12) eQTL that are part of a network associated with lipid metabolism and in turn overlap with pQTL regions for marbling, % intramuscular fat (% fat) and loin muscle area on Sus scrofa (SSC) chromosome 6. Additionally, we report 13 genomic regions with overlapping eQTL and pQTL involving 14 local eQTL. Conclusions/Significance: Results of this analysis provide novel candidate genes for important complex pig phenotypes.
- Published
- 2011
4. GENETIC PARAMETER ESTIMATES FOR REPRODUCTIVE TRAITS OF MALE AND FEMALE LITTERMATE SWINE
- Author
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Bates, R. O., Buchanan, D. S., Johnson, R. K., Wetteman, R. P., Fent, R. W., Hutchens, L. K., Bates, R. O., Buchanan, D. S., Johnson, R. K., Wetteman, R. P., Fent, R. W., and Hutchens, L. K.
- Abstract
Reproductive traits of purebred and crossbred pigs produced in a four-breed diallel mating system using the Duroc, Landrace, Spotted and Yorkshire breeds were collected for five consecutive farrowing seasons (two farrowing seasons/year) beginning in fall 1976. Paternal half-sib heritabilities and genetic correlations for testicular traits (120 boars from 36 sires), serum testosterone (TE) and luteinizing hormone (LH) concentrations before and after treatment with gonadotropin releasing hormone (GnRH; 131 boars from 37 sires) and breeding performance traits (151 boars from 38 sires) were estimated. Heritability estimates were generally small to moderate except for sperm/gram testis (SGT), LH concentrations before (LH0) and at 3 h (LH3) after treatment with GnRH (.73 ± .48, .61 ± .46 and 1.19 ±.45, respectively). A large positive genetic correlation was found for LH0 with LH3 (.94 ± .39), while a negative relationship existed for LH3 with TE concentrations at 3 h after GnRH injection. The genetic correlation between a boar's average first service conception rate and average conception rate also was significant (.82 ± .54). Genetic correlations among littermate traits would suggest that selection for decreased age at puberty in gilts could cause an increase in LH concentrations in boar offspring, before and after GnRH injection, and may also have adverse effects on their ability to settle females. Selection for increased weight at puberty of gilts could cause TE concentrations of boar offspring to increase while having little effect on their breeding performance.
- Published
- 1986
5. Association of halothane sensitivity with growth and meat quality in pigs.
- Author
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Bates RO, Doumit ME, Raney NE, Helman EE, and Ernst CW
- Subjects
- Animals, Behavior, Animal, Female, Stress, Physiological, Swine genetics, Swine growth & development, Anesthetics, Inhalation adverse effects, Halothane adverse effects, Meat standards, Muscle, Skeletal chemistry, Ryanodine Receptor Calcium Release Channel genetics, Swine physiology
- Abstract
Previous reports have indicated that a proportion of pigs, homozygous normal for the skeletal muscle ryanodine receptor gene (RYR1), was halothane sensitive, and this was associated with poor meat quality when pigs were handled aggressively. This study was conducted to evaluate halothane sensitivity in RYR1-normal pigs, managed under simulated commercial conditions, to ascertain the association of halothane sensitivity with growth rate and meat quality. A total of 363 pigs across four farrowing groups, from seven Landrace sires and 38 Yorkshire-Landrace F1 dams, were tested at 8 weeks of age for halothane sensitivity using a closed system that delivered 5% halothane at 2 l/min for 3 (group 1) or 2 (groups 2 to 4) min. After 1 min, limb rigidity, limb tremors and abdominal discoloration were evaluated on a binomial scale with 0 indicating no reaction and 1 indicating reaction. Testing was repeated 2 days later. At 10 weeks of age, pigs were moved to finishing pens and not moved again until marketing. Within farrowing group, pigs were harvested in one of two groups, and at marketing were moved a distance of 91 m, weighed, tattooed, loaded and transported a distance of 550 km to a commercial harvest plant. After overnight rest, pigs were harvested and the pH of the loin muscle was measured at 45 min (pH45) after stunning. After an 18-h chill, loin muscle pH (pHu), International Commission on Illumination (CIE) L*, a*, b*, color (1 to 6) and marbling (1 to 10) scores and fluid loss percent were collected. Generalized linear mixed models were used to estimate repeatabilities for response to halothane challenge. Repeatabilities for limb rigidity for the front right and left legs were 0.24 and 0.31, respectively, whereas rear right and left leg repeatabilities were 0.19 and 0.17, respectively. Repeatabilities for front right and left leg tremors were 0.16 and 0.20, respectively. Growth rate was not influenced by any measure of halothane sensitivity. Carcasses from pigs exhibiting limb rigidity tended to have lower pH45 (5.88 v. 5.97; P = 0.06), similar pHu (5.47 v. 5.49; P = 0.32), less pH decline from 45 min to 18 h (-0.40 v. -0.50; P = 0.04) and a tendency for greater fluid loss percent (5.01 v. 4.55; P = 0.08) than carcasses from pigs that did not exhibit limb rigidity during halothane challenge. A proportion of pigs normal for RYR1 did exhibit limb rigidity during halothane gas challenge, and subsequently tended to have lower 45 min pH and greater longissimus muscle fluid loss post harvest.
- Published
- 2012
- Full Text
- View/download PDF
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