1. Pax3 and Zic1 trigger the early neural crest gene regulatory network by the direct activation of multiple key neural crest specifiers
- Author
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Plouhinec, Jean-Louis, Roche, Daniel D, Pegoraro, Caterina, Figueiredo, Ana Leonor, Maczkowiak, Frédérique, Brunet, Lisa J, Milet, Cécile, Vert, Jean-Philippe, Pollet, Nicolas, Harland, Richard M, and Monsoro-Burq, Anne H
- Subjects
Biological Sciences ,Bioinformatics and Computational Biology ,Genetics ,Neurosciences ,Pediatric ,Biotechnology ,Underpinning research ,1.1 Normal biological development and functioning ,Animals ,Electrophoretic Mobility Shift Assay ,Gene Expression Regulation ,Developmental ,Gene Regulatory Networks ,In Situ Hybridization ,Microarray Analysis ,Neural Crest ,PAX3 Transcription Factor ,Paired Box Transcription Factors ,Real-Time Polymerase Chain Reaction ,Reverse Transcriptase Polymerase Chain Reaction ,Transcription Factors ,Xenopus Proteins ,Xenopus laevis ,Neural crest ,Pax3 ,Zic1 Gene regulatory network ,Transcriptome ,Microarray ,Embryo ,Gene regulatory network ,Zic1 ,Medical and Health Sciences ,Developmental Biology ,Biological sciences ,Biomedical and clinical sciences ,Health sciences - Abstract
Neural crest development is orchestrated by a complex and still poorly understood gene regulatory network. Premigratory neural crest is induced at the lateral border of the neural plate by the combined action of signaling molecules and transcription factors such as AP2, Gbx2, Pax3 and Zic1. Among them, Pax3 and Zic1 are both necessary and sufficient to trigger a complete neural crest developmental program. However, their gene targets in the neural crest regulatory network remain unknown. Here, through a transcriptome analysis of frog microdissected neural border, we identified an extended gene signature for the premigratory neural crest, and we defined novel potential members of the regulatory network. This signature includes 34 novel genes, as well as 44 known genes expressed at the neural border. Using another microarray analysis which combined Pax3 and Zic1 gain-of-function and protein translation blockade, we uncovered 25 Pax3 and Zic1 direct targets within this signature. We demonstrated that the neural border specifiers Pax3 and Zic1 are direct upstream regulators of neural crest specifiers Snail1/2, Foxd3, Twist1, and Tfap2b. In addition, they may modulate the transcriptional output of multiple signaling pathways involved in neural crest development (Wnt, Retinoic Acid) through the induction of key pathway regulators (Axin2 and Cyp26c1). We also found that Pax3 could maintain its own expression through a positive autoregulatory feedback loop. These hierarchical inductions, feedback loops, and pathway modulations provide novel tools to understand the neural crest induction network.
- Published
- 2014