Search

Silicon (Si), although mostly ignored by plant nutritionists and ecologists, is now gaining more attention because of its beneficial role in plant fitness under stress environment imposed by a diverse range of biotic and abiotic factors. Si appears to systematically confer benefits to plants as long as a given species can absorb the element. Here, we review recent developments regarding the molecular mechanisms, evolution, regulation and structural specificity of influx transporter proteins involved in Si uptake by plants., Si absorption is facilitated by specific nodulin 26-like intrinsic proteins ( NIPs). The Si transporter NIPs have evolved a unique amino acid selective filter ( SF), which is one of the required features to regulate the influx of Si. While Si accumulation in plants requires the dual action of both an influx transporter and an efflux transporter, it appears that the presence of the former is the indispensable key for a plant to be able to absorb Si., Based on sequence analyses and comparisons, influx transporters appear to have conserved features across all species that allow to discriminate between plants that are Si competent or not. While it is unclear how and why plants have acquired or lost this trait, genomic data now offer a reliable tool to predict with accuracy which plant species are predisposed to benefit from Si. This will undoubtedly result in a better understanding of Si role in many fundamental aspects of ecology regarding plant fitness under stress. [ABSTRACT FROM AUTHOR]

Allotetraploid rapeseed ( Brassica napus L., AnAnCnCn, 2 n = 4x = 38) is extraordinarily susceptible to boron (B) deficiency, a ubiquitous problem causing severe losses in seed yield. The breeding of B-efficient rapeseed germ plasm is a cost-effective and environmentally friendly strategy for the agricultural industry; however, genes regulating B efficiency in allotetraploid rapeseed have not yet been isolated. In this research, quantitative trait locus (QTL) fine mapping and digital gene expression (DGE) profiling were combined to identify the candidate genes underlying the major-effect QTL qBEC-A3a, which regulates B efficiency. Comparative phenotype analyses of the near-isogenic lines (NILs) indicated that qBEC-A3a plays a significant role in improving B efficiency under B deficiency. Exploiting QTL fine mapping and DGE analyses revealed a nodulin 26-like intrinsic protein (NIP) gene, which encodes a likely boric acid channel. The gene co-expression network for putative B transporters also highlighted its central role in the efficiency of B uptake. An integration of whole-genome re-sequencing (WGS) with bulked segregant analysis (BSA) authenticated the emerging availability of QTL-seq for the QTL analyses in allotetraploid rapeseed. Transcriptomics-assisted QTL mapping and comparative genomics provided novel insights into the rapid identification of quantitative trait genes (QTGs) in plant species with complex genomes. [ABSTRACT FROM AUTHOR]

Nodulation is an extraordinary symbiotic interaction between leguminous plants and nitrogen-fixing bacteria (rhizobia) that assimilate atmospheric nitrogen (in root nodules) and convert it into compounds suitable for the plant host. A class of plant hormones called cytokinins are involved in the nodulation process. In the model legume Medicago truncatula, nodulin 13 (MtN13), which belongs to the pathogenesis-related proteins of class 10 (PR-10), is expressed in the outer cortex of the nodules. In general, PR-10 proteins are small and monomeric and have a characteristic fold with an internal hydrophobic cavity formed between a seven-stranded antiparallel β-sheet and a C-terminal α-helix. Previously, some PR-10 proteins not related to nodulation were found to bind cytokinins such as trans-zeatin. Here, four crystal structures of the MtN13 protein are reported in complexes with several cytokinins, namely trans-zeatin, N6-isopentenyladenine, kinetin and N6- benzyladenine. All four phytohormones are bound in the hydrophobic cavity in the same manner and have excellent definition in the electron-density maps. The binding of the cytokinins appears to be strong and specific and is reinforced by several hydrogen bonds. Although the binding stoichiometry is 1:1, the complex is actually dimeric, with a cytokinin molecule bound in each subunit. The ligand-binding site in each cavity is formed with the participation of a loop element from the other subunit, which plugs the only entrance to the cavity. Interestingly, a homodimer of MtN13 is also formed in solution, as confirmed by small-angle X-ray scattering (SAXS). [ABSTRACT FROM AUTHOR]

The objective of this review is to summarise current knowledge about the structure and function of the peribacteroid membrane from the root nodules of leguminous plants. The information is presented in terms of development of this symbiotic membrane from its origin, through proliferation and in the mature state. There are clear indications that the peribacteroid membrane has a distinct structure and function at each developmental stage. The mature peribacteroid membrane has been the most intensively studied. The lipid and protein content of the mature peribacteroid membrane is discussed with particular emphasis on genetic and functional studies of the proteins. The mechanism and control of peribacteroid membrane biogenesis is also discussed. There is evidence for a specific biogenetic pathway for this membrane which requires both symbiotic partners for its correct functioning. [ABSTRACT FROM AUTHOR]

The symbiotic root nodule, an organ formed on leguminous plants, is a product of successful interactions between the host plant and the soil bacteria, Rhizobium spp. Plant hormones play an important role in the genesis of this organ. The hormonal balance appears to be modulated by the signals produced by bacteria. Many host genes induced during nodule organogenesis and the symbiotic state have been identified and characterized from several legumes. These genes encode nodule-specific proteins (nodulins) which perform diverse functions in root nodule development and metabolism. Formation of a subcellular compartment housing the bacteria is essential to sustain the symbiotic state, and several nodulins are involved in maintaining the integrity and function of this compartment. The bacteroid enclosed in the perbacteroid membrane behaves as an ‘organelle,’ completely dependent on the host for all its requirements for carbon, nitrogen and other essential elements. Thus it seems likely that the nodulins in the peribacteroid membrane perform specific transport functions. While the function of a few other nodulins is known (e.g. nodulin-100, nodulin-35), a group of uncharacterized nodulins exists in soybean root nodules. These nodulins share structural similarities and seem to have been derived from a common ancestor. Induction of nodulin genes occurs prior to and independent of nitrogen fixation, and thus is a prelude to symbiosis. Although some of the early nodulin genes are induced prior to or during infection, induction of late nodulins requires endocytotic release of bacteria. [ABSTRACT FROM AUTHOR]

Soybean [Glycine max (L.) Merr. cv. Amsoy 71] plants were inoculated with either the vesicular‐arbuscular mycorrhizal (VAM) fungus Glomus fasciculatum, with a strain of Bradyrhizobium japonicum. or with both endophytes together. Non‐inoculated plants were fertilized with levels of N and P that resulted in plant growth similar to that following infection by Bradyrhizobium or Glomus, respectively. In general, plants colonized by Glomus contained more pinitol (1D‐3‐O‐methyl‐chiro‐inositol) but less starch than corresponding P‐fertilized soybeans, while nodulated soybeans contained more pinitol and sucrose in the roots than corresponding N‐fertilized plants. Compared to nutrient‐amended soybeans, increases or decreases in free amino acids in symbiotically grown plants tended to follow transient changes in N content and endophyte activity. The exception to this was the elevated levels of methionine in nodulated roots or aspartate and arginine in Glomus‐inoculated roots regardless of N level. There were both quantitative and qualitative changes in the proteins found in inoculated soybeans, especially in infected roots where nodulins (nodule‐specific proteins) and endomycorrhizins (mycorrhiza‐specific proteins) were detected by polyacrylamide gel eletrophoresis. Five nodulins (11.8% of root proteins) were detected with molecular weights of 14, 34, 40, 41 and 100 kDa. Five endomycorrhizins (5.1% of root proteins) were detected with molecular weights of 16, 17, 18, 22 and 30 kDa. Differences in nutrient uptake and allocation in symbiotic plants could not be duplicated by fertilizer input alone, although nutrient addition could lead to similar growth rates and dry weight accumulation. These findings suggest that the quality and quantity of plant carbohydrates, proteins and amino acids shift in response to the physiological changes resulting from infection by N2‐fixing bacteria or endomycorrhizal fungi. [ABSTRACT FROM AUTHOR]

In roots of the lupine (Lupinus luteus L. cv. Ventus) glutamate dehydrogenase (EC L4.1.2-4) was present in a single, electrophoretically homogeneous form (GDHR), while in root nodules eight forms of the enzyme (GDHN) were detected. Highly purified fractions of glutamate dehydrogenase from roots and nodules were used to prepare antisera in rabbits. The two antisera recognized extracts of glutamate dehydrogenase from both roots and nodules. Low concentrations of the antiserum raised against nodule glutamate dehydrogenase precipitated GDH from the nodule extract (the homologous antigen) effectively but decreased the activity of GDH from the root extract only slightly. At high concentrations, however, the antiserum totally precipitated both enzyme extracts. Ouchterlony's double diffusion test showed that seven forms of root nodule glutamate dehydrogenase arose as the result of random association of two subunits in a hexameric complex, while the eighth form probably consisted of totally distinct subunits. The question of whether the new glutamate dehydrogenase forms, present exclusively in root nodules, can be classified as nodulins is discussed. [ABSTRACT FROM AUTHOR]

Root nodule organogenesis is described. Plant regulated aspects of nodulation and N2 fixation are reviewed and discussed. Since the effective N2 fixing symbiosis requires the interaction of the host plant and bacterium in an appropriate environment (the rhizosphere and the root nodule) it is essential that research aimed at improving N2 fixation involve a knowledge and understanding of the plant genes that affect nodule development, growth, and function. Current knowledge of host plant genes involved in N2 fixation is summarized. Various experimental approaches to the study of the host plant's contribution to nodulation are noted. The functions of nodule specific proteins (nodulins) in symbiosis are delineated. Future areas of research are suggested. [ABSTRACT FROM AUTHOR]