1. DNA Hypomethylation Activates the RpMYB2‐Centred Gene Network to Enhance Regeneration of Adventitious Roots.
- Author
-
Hussain, Syed Sarfaraz, Li, Yapeng, Liu, Jie, Abbas, Manzar, Li, Quanzi, Deng, Houyin, Abbas, Sammar, Han, Kunjin, Han, Juan, Sun, Yuhan, and Li, Yun
- Subjects
- *
REGENERATION (Botany) , *BLACK locust , *GENE regulatory networks , *DNA methylation , *ROOT development - Abstract
ABSTRACT Plants, being immobile, are exposed to environmental adversities such as wind, snow and animals that damage their structure, making regeneration essential for their survival. The adventitious roots (ARs) primarily emerge from a detached explant to uptake nutrients; therefore, the molecular network involved in their regeneration needs to be explored. DNA methylation, a key epigenetic mark, influences molecular pathways, and recent studies suggested its role in regeneration. In our research, the application of 5‐azacytidine (5‐azaC), an inhibitor of DNA methylation, caused the earlier initiation and development of root primordia and consequently enhanced the AR regeneration rate in
Robinia psuedoacacia L (black locust). The whole‐genome bisulfite sequencing (WGBS) revealed a decrease in global methylation and an increase in hypomethylated cytosine sites and regions across all contexts including CHH, CHG and mergedCG caused transcriptional variations in 5‐azaC‐treated sample. The yeast two‐hybrid (Y2H) assay revealed aRpMYB2 ‐centred network of transcriptionally activated transcription factors (TFs) includingRpWRKY23 ,RpGATA23 ,RpSPL16 and other genes likeRpSDP ,RpSS1 ,RpBEN1 ,RpGULL05 andRpCUV with nuclear localization suggesting their potential co‐localization. Additionally, yeast one‐hybrid (Y1H) assay showed the interaction of RpMYB2 interactors, RpGATA23 and RpWRKY23, with promoters ofRpSK6 andRpCDC48 , and luciferase reporting assay (LRA) validated their binding withRpSK6 . Our results revealed that hypomethylation‐mediated transcriptomic modifications activated theRpMYB2 ‐centred gene network to enhance AR regeneration in black locust hypocotyl cuttings. These findings pave the way for genetic modification to improve plant regeneration ability and increase wood production while withstanding environmental damage. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF