Search

Gregarine apicomplexans are ubiquitous endosymbionts of invertebrate hosts. Despite their ecological and evolutionary importance, inferences about the phylogenetic relationships of major gregarine groups, such as the Lecudinidae and Urosporidae, have been hindered by vague taxonomic definitions and limited molecular and morphological data. In this study, we investigated five gregarine species collected from four families of polychaete hosts (Nereididae, Oenonidae, Hesionidae, and Phyllodocidae) using light microscopy (LM) and scanning electron microscopy (SEM). We also generated small subunit ribosomal DNA sequences from these species and conducted molecular phylogenetic analyses to elucidate the evolutionary relationships within the Lecudinoidea. Our results include new molecular and morphological data for two previously described species (Lecudina cf. platynereidis and Lecudina cf. arabellae), the discovery of a new species of Lecudina (L. oxydromus n. sp.), and the discovery of two novel species, namely Amplectina cordis n. gen. et. n. sp. and Sphinctocystis inclina n. sp. These two species exhibited unique shapes and movements, resembling those of urosporids but with a phylogenetic affinity to lecudinids, blurring the border between lecudinids and urosporids. Our study emphasizes the need for further investigations into this highly diverse group, which has achieved great success across multiple animal phyla with diverse shapes and movements. [ABSTRACT FROM AUTHOR]

Researchers often use surrogate species for assessing biodiversity—organisms that can indicate the presence of additional taxa or provide insight into environmental processes. As indicators of anthropogenic impact, "cross‐taxon" surrogates are theorized to be effective shortcuts for determining how communities respond to environmental change. However, few studies have implemented cross‐taxon surrogates given the challenge of validating the strength of the relationship between surrogates and their target taxa. Trophically transmitted parasites require multiple invertebrate and vertebrate taxa to complete their life cycles (e.g., annelids, mollusks, fishes, shorebirds), making them ideal cross‐taxon surrogates of community diversity. By sampling for these parasite surrogates, it is theoretically possible to infer the composition of the overall host community based on the species of parasites present. In our study, we tested the use of parasites as cross‐taxon surrogates of biodiversity by sampling for digenetic trematodes in the mudsnail Ilyanassa obsoleta, collected from coastal shoreline environments with or without artificial structures (e.g., bulkheads, seawalls). We found that trematode richness, evenness, and diversity were all greater in snails sampled from natural shorelines versus those with artificial structures. While parasite communities clustered by shoreline type (with vs. without artificial structures), we found no differences in multivariate dispersion, or beta‐diversity, between groups in our system. At the species level, trematodes requiring polychaetes and estuarine fishes as downstream hosts dominated parasite communities at shorelines with artificial structures. These taxa are ubiquitous but more abundant in degraded environments. In contrast, trematode species requiring mollusks and shorebirds as hosts was only documented from shorelines without artificial structures (i.e., natural), which may indicate that these areas are less degraded and have greater overall host diversity. High parasite diversity in easily collected hosts (e.g., mudsnails) provides evidence that the secondary (polychaetes, crustaceans) and tertiary (fishes, shorebirds) hosts required by the parasites are present in the system. Our study also helps validate the concept of surrogate species by demonstrating how a single species can represent broader taxonomic groups. [ABSTRACT FROM AUTHOR]

The Prionospio complex comprises the most diverse and complex group within the polychaete family Spionidae. The phylogenetic relationships within the group are still poorly understood, and the generic breakdown is unstable. In this study, we assessed the diversity, relationships, and distribution of species of the Prionospio complex occurring in Norwegian waters. We analysed mitochondrial genomes and nuclear ribosomal DNA assembled via whole‐genome shotgun sequencing, and Sanger sequenced fragments of COI and 16S rDNA. Sanger sequencing proved challenging in the group, where COI was only amplified successfully in 14% of specimens. By molecular species delimitation algorithms, our study revealed the presence of four well‐supported but currently undescribed species of Prionospio in Norwegian waters. We observed a novel distribution pattern of polychaetes in coastal waters, where certain species demonstrated distribution ranges spanning over 7000 km. Such wide distribution parallels patterns of deep‐sea Prionospio species, suggesting that factors beyond recent anthropogenic translocations are involved. Our analysis of 38 mitochondrial genomes and ribosomal nuclear DNA enabled us to hypothesise on the phylogenetic relationships of 14 species of the Prionospio complex. The analysis suggested that two characters previously used to designate genera: the beginning of the branchiae from chaetiger 3 and the presence of pinnules on the branchiae, might have evolved more than one time within the complex. We return Aurospio banyulensis to the genus Prionospio according to the diagnosis of Aurospio resulting tree where this species was nested among Prionospio species. Our findings provide new insights into the diversity and distribution patterns of Prionospio species and contribute to a better understanding of marine benthic biodiversity and the importance of taxonomic accuracy in conservation and management practices. [ABSTRACT FROM AUTHOR]

Biological diversity can be evaluated by the taxonomic and functional components. This study aimed to assess the relationship between taxonomic richness with the functional diversity components [functional richness (FRic), functional evenness (FEve) and functional divergence (FDiv)] and the functional trait dominance of polychaetes. In addition, we evaluated the environmental parameters that shape the functional structure in six tropical estuaries in north‐eastern Brazil. Three estuaries have a continuous environmental gradient (typical tropical), and the other three estuaries have no defined environmental gradient (semiarid tropical). We identified significant differences in the dominance of feeding strategy and habitat between estuaries, demonstrating that the functional space of the communities is not equally occupied. Also, the substrate particle size composition was correlated with the functional structure. FRic showed a positive relationship with taxonomic richness, regardless of the type of estuary. As taxonomic richness increases, the probability of different combinations of functional categories added to a community also increases. FEve and FDiv seem to be independent of taxonomic richness. Therefore, it is important to simultaneously evaluate diversity's taxonomic and functional components, considering the complementarity of the information provided by these diversity measures. [ABSTRACT FROM AUTHOR]

Reciprocity, one of the evolutionary explanations for cooperation, evolves between individuals when helping is conditional upon receiving help in return ("A helps B because B helped A before"). Often tested in controlled laboratory conditions, its robustness to external disturbances has rarely been evaluated. Here, we investigated whether reciprocity is robust when disturbances occur in between the donation by one individual and its return by a partner. As model system, we used a simultaneously hermaphroditic polychaete worm (Ophryotrocha diadema), where partners in isolated dyads engage in iterated exchanges of eggs for sperm (eggs are a costly donation relatively to sperm). If a partner donates eggs and the other fertilizes them, the latter is likely to donate eggs a couple of days later. (Eggs and larvae are then cared by the parents which sit at the nest and only leave it for foraging.) We removed the eggs from the nests daily or weekly and found that reciprocity decisions were not substantially altered; focal worms were more likely to lay if the partner laid before. We also found that, irrespective of treatment, worms exchanged comparable number of eggs, and were stimulated to lay significantly sooner if the partners laid a second clutch before they reciprocated. These results show that reciprocity is robust to disturbances which may happen in the 2 days' time gap between egg donation and egg reciprocation. [ABSTRACT FROM AUTHOR]

Genetic data show that many nominal species are composed of more than one biological species, and thus contain cryptic species in the broad sense (including overlooked species). When ignored, cryptic species generate confusion which, beyond biodiversity or vulnerability underestimation, blurs our understanding of ecological and evolutionary processes and may impact the soundness of decisions in conservation or medicine. However, very few hypotheses have been tested about factors that predispose a taxon to contain cryptic or overlooked species. To fill this gap, we surveyed the literature on free‐living marine metazoans and built two data sets, one of 187,603 nominal species and another of 83 classes or phyla, to test several hypotheses, correcting for sequence data availability, taxon size and phylogenetic relatedness. We found a strong effect of scientific history: the probability of a taxon containing cryptic species was highest for the earliest described species and varied among time periods potentially consistently with an influence of prevailing scientific theories. The probability of cryptic species being present was also increased for species with large distribution ranges. They were more frequent in the north polar and south polar zones, contradicting previous predictions of more cryptic species in the tropics, and supporting the hypothesis that many cryptic species diverged recently. The number of cryptic species varied among classes, with an excess in hydrozoans and polychaetes, and a deficit in actinopterygians, for example, but precise class ranking was relatively sensitive to the statistical model used. For all models, biological traits, rather than phylum, appeared responsible for the variation among classes: there were fewer cryptic species than expected in classes with hard skeletons (perhaps because they provide good characters for taxonomy) and image‐forming vision (in which selection against heterospecific mating may enhance morphological divergence), and more in classes with internal fertilisation. We estimate that among marine free‐living metazoans, several thousand additional cryptic species complexes could be identified as more sequence data become available. The factors identified as important for marine animal cryptic species are likely important for other biomes and taxa and should aid many areas in biology that rely on accurate species identification. [ABSTRACT FROM AUTHOR]

Intensive temporal and spatial sampling of benthic infauna have rarely been analysed to improve impact assessment or conservation planning. An impact assessment started in the late 1980s in Jervis Bay (Australia) provided a spatially, temporally and taxonomically comprehensive benthic invertebrate dataset. While the proposed development did not eventuate, the area was later declared a multi‐zone marine park.We specifically used the polychaete data which included nine sampling times (February 1989 to June 1991) in seagrass and unvegetated sediments across multiple sites to identify ecological patterns that could inform current and future conservation management and impact assessment.The polychaete assemblage was diverse with 171 species, many of them rare (40% < 10 individuals). Variation was greatest at small spatial scales (metres) for abundances and diversity, and there was substantial spatio‐temporal variation due to inconsistent site differences. Most species occurred in both unvegetated and seagrass sediments, though several were more abundant or restricted to one habitat (39% and 3% only found in unvegetated or seagrass, respectively), or showed bathymetric differences in abundances (e.g., Eunice cultrifera and Lumbrineris cf. latrelli).The current marine park zoning representatively covered polychaete biodiversity, as all sites were generally similar in terms of abundances and species richness. It also representatively covered seagrass and unvegetated sediments and the bathymetric range of the embayment. These findings reinforce the utility of using habitats as surrogates to representatively zone for biological diversity.The high levels of spatial and spatio‐temporal variation in abundances and diversity only allowed detection of environmental impacts with >70% effect sizes even if numerous sites and times were sampled (i.e., > seven sites and > eight times). This suggests that most univariate measures for polychaetes would only be useful to detect enormous effects, and effective impact assessment might require more sophisticated multivariate approaches. [ABSTRACT FROM AUTHOR]

Trace fossils record the interactions between organisms and their surroundings, and can therefore provide unique insights into the coevolution of trace makers and the environment. However, identifying the producers of trace fossils is challenging because different animals can create very similar traces and many ichnotaxa can therefore only be attributed to broad morphological grades. For example, simple horizontal traces like Gordia are generally suggested to have been produced by vermiform organisms, potentially encompassing a range of animal phyla. This uncertainty makes it difficult to decipher their palaeobiological significance through major evolutionary events and episodes of environmental change. We have developed new mathematical approaches for identifying previously unrecognized signatures left by the trace makers of simple marine locomotory traces. We calculated the deviation angle series of self‐crossing traces made by extant isopods, polychaetes, gastropods and nematodes, computing the frequency spectrum and autocorrelation function in each case. The results reveal that each of these taxa left unique markers during the trace‐making process, reflecting differences in their anatomy and locomotory behaviour. We were able to identify the possible trace makers of several early Palaeozoic Gordia specimens, demonstrating that ichnospecies within the same ichnogenus can be created by distantly related animals with very different morphologies and/or behaviours. This novel mathematical framework has great potential for identifying the possible producers of diverse trace fossils through deep time, helping to uncover the earliest evidence of certain animals or behaviours. It also has great potential for quantifying ichnotaxonomy, consolidating the link between ichnology and palaeobiology. [ABSTRACT FROM AUTHOR]

Polychaeta are highly diversified invertebrates that inhabit marine, brackish or freshwater environments. They have acquired a unique range of adaptative features for securing food. However, the jaw apparatus may reveal not only defence and predation mechanisms, but also its relation to environmental chemistry. The present work compared the structure and chemical profile of the jaws of different estuarine Polychaeta: Nephtys hombergii (Nephtyidae), Hediste diversicolor (Nereididae) and Glycera alba (Glyceridae) using Scanning Electron Microscopy (SEM) and Scanning Electron Microscopy with Energy Dispersive X‐Ray (SEM–EDX). Analyses revealed that N. hombergii possesses a muscular jawless proboscis with terminal sensorial papillae for detecting prey, whereas the G. alba proboscis exhibits four delicately sharp jaws with perforations for venom delivery and H. diversicolor bears two blunt denticulated jaws to grasp a wide variety of food items. Melanin and metals like copper provide hardness to the slender jaws of Glycera, while, in the absence of heavier metallic elements, halogens contribute to H. diversicolor jaws robustness. The more specific chemistry of the jaws of glycerids is associated with its more refined venom injection, whereas Hediste is an opportunistic omnivore and Nepthys an agile forager. Altogether, the chemistry of jaws is an adaptive feature for feeding, locomotion and even resilience to complex and often adverse chemical profiles of estuaries. [ABSTRACT FROM AUTHOR]

Myzostomida are putatively nested within the errant Annelida and exhibit a unique morphology. The latter fact might possibly be related to their long host‐dependent radiation. Hence, an incomplete segmentation, lack of prominent sensory structures in adults and a dorso‐ventrally flattened body are just some examples. Although numerous investigations of the nervous system exist for myzostomids, detailed ultrastructural as well as histological examinations of neuronal structures are lacking so far. Therefore, we investigate the nervous system of Myzostoma cirriferum Leuckart, 1836 using a comparative approach including paraffin histology, serial semi‐thin sections, immunohistochemistry and ultrastructural investigations. Our analyses reveal a lack of complexity within the anterior‐most neuronal condensation (herein called brain) of adult specimens. Hence, prominent tracts or glomeruli are absent, and a glial layer surrounding the brain or radial‐like glial cells are lacking. Nevertheless, the ultrastructure of the ventral nervous system is comparable to other Errantia. Therefore, our investigations hint towards a reduction of neuronal complexity in Myzostomida. Additionally, an ontogenetic simplification seems plausible, although further investigations are necessary to verify such a hypothesis. A simplification of neuronal structures due to a drastic change in lifestyle was so far mainly observed for basally branching annelid clades. [ABSTRACT FROM AUTHOR]

Bipartite life histories involve a suite of morphological changes that support the pelagic to demersal transition and an expanded range of prey options and microhabitats. Pelagic individuals are thought to shift (settle) to their preferred benthic habitat at the earliest opportunity once they have attained a minimum level of morphological competency to access their new environment. In theory, early changes in larval morphology (collectively termed 'metamorphosis'), habitat and diet—a measure of habitat‐use—ought to be synchronous. Yet relationships may be decoupled by factors linked to behaviour, prey availability or morphological complexity, and few descriptions exist to allow such synchrony to be assessed. The sand goby, Pomatoschistus minutus, is a common coastal fish across north‐western Europe, with a size at larval metamorphosis and settlement of around 10 and 16–18 mm standard length (SL), respectively. We sampled shoreline larval and juvenile populations to examine relationships between morphology, diet and life stage. Prey diversity increased with body length; however, dietary change was clearest at 16–18 mm SL, with a reduction in calanoid copepods and shift to larger prey such as Nereis polychaetes and mysid and amphipod crustacea. Early growth in five prey capture and processing morphologies was rapid. Four of these showed a subsequent marked shift to slower growth, but none of these changes were aligned with size at metamorphosis and only that of mouth width coincided with body size at settlement. Early life history in P. minutus appears geared towards a protracted morphological reorganization prior to demersal life and an alternative suite of prey resources. Larval metamorphosis seems to be of limited consequence in this regard. Comparable studies of other Baltic Sea fishes would confirm whether these dynamics relate to shared environmental pressures or to factors intrinsic to P. minutus biology. [ABSTRACT FROM AUTHOR]

Polychaetes, echinoids and gastropods have been proposed as tracemakers for Bolonia Meunier, an elongate positive epirelief trace fossil characterized by two lobes composed of biserial, subtriangular pads and a mostly heart‐shaped cross‐section. Here, the internal structure and micromorphology of Bolonia are described for the first time using serial thin sections from shallow‐marine Lower Cretaceous intervals of the Agrio Formation (Neuquén Basin, Argentina). In vertical thin sections, a conical structure of variable width extends centrally from the base to the top of the trace. In horizontal thin sections, grains are reoriented and reworked, forming a central zigzag structure. The organic matter and clays form grain aggregates representing the internal structure of individual pads of the trace fossil. The sediment has mostly been reoriented, with grains making up subcircular pods. We interpret the central conical structure as the collapse of the medial zone of the trace fossil, which could have destroyed drain tubes, especially in the absence of early cementation. Studying horizontal thin sections, we reconstruct the diagnostic biserial pads as biserial concave structures. These are interpreted as backfilling structures produced by the aboral and lateral spines of irregular echinoids, which worked together to compact the sediment anteroposteriorly and moved alternatively, explaining the zigzag pattern in the menisci. We propose Spatangoidea or Cassiduloidea (or a closely related group) with a similar burrowing ability and spine movement as tracemakers of these Bolonia specimens. [ABSTRACT FROM AUTHOR]

Carijoa riisei is an invasive octocoral whose dispersal in the tropics has increased considerably in recent years. This study evaluated the changes in the benthic fauna assemblages associated with C. riisei growing on rocks from a sea port and on the metal of a submerged shipwreck in the bays of Manzanillo, Colima, in the Mexican Central Pacific. Quarterly samples were collected between April 2021 and January 2022, with the presence or absence of C. riisei. The effect of C. riisei on the benthic fauna according to the type of substrate was evaluated with PERMANOVA models. The presence of C. riisei was found to affect taxonomic diversity. In the absence of the octocoral, 209 species were recorded, whereas in its presence, 190 were found. The decline of taxa occurred at the level of families, genera, and species. The interaction of the presence/absence of C. riisei and substrate generated significant changes in the Shannon (1D) and Simpson (2D) diversity indexes. However, the presence of C. riisei coincided with higher abundances of Ophiothela mirabilis, Ericthonius brasiliensis, and Pseudobranchiomma schizogenica. In conclusion, the snowflake coral favors the dominance of some species and reduces the biological diversity of several taxa, mainly mollusks, polychaetes, sipunculids, and anthozoans, generating significant changes in the structure of benthic communities. This study highlights the need to evaluate species composition in areas where the octocoral grows, to determine whether its presence has an ecological impact and whether control measures are required. [ABSTRACT FROM AUTHOR]

The South China Sea (SCS) basin is hypothesized to host distinct and bathymetrically differentiated fauna due to its semi‐enclosed basin and three‐layer circulation system. To test this hypothesis, three cow falls are artificially deployed at separate depths (655, 1604, and 3402 m) on Zhongnan seamount in the middle SCS, and the associated worms, Sirsoe spp. are selected as targets to explore their diversity, phylogeny, and zonation pattern. Analyses of collected specimens reveal three new Sirsoe species, which were then nominally described and named as S. polita sp. nov. (655 m), S. nanhaiensis sp. nov. (1604 and 3402 m), and S. feitiana sp. nov. (3402 m), and one known species (S. balaenophila lineage II). Metabarcoding analyses on cow‐fall sediments reveal seven additional Operated Taxonomic Units (OTUs) assigned to Sirsoe, increasing the Sirsoe diversity to 10 species/OTUs in the middle SCS. Their distribution along depth shows increasing diversity toward the deeper sites. Phylogenetic inferences recover S. polita closely related to S. alucia from the Southwest Atlantic, forming a lineage deeply divergent from others. The nine deep‐water species/OTUs are scattered in three distinct lineages showing closer phylogenetic relationships between 1604‐ and 3402‐m counterparts. The lineage formed by S. naihaiensis and S. feitiana is distinct from other non‐SCS congeners both morphologically and genetically. These results suggest multiple independent invasions of Sirsoe to the SCS, a new lineage potentially endemic to the SCS, and a strong zonation pattern related to depth, especially between the shallow (655 m) and the deep (1604 and 3402 m) sites. The semi‐enclosed feature combined with the physical structure of the SCS may contribute to such a pattern. This work is registered in ZooBank under: urn:lsid:zoobank.org:pub:317771C8‐42D717‐4765‐A168‐B3BE99B09FBF. [ABSTRACT FROM AUTHOR]

Aim: The abyssal Clarion‐Clipperton Zone (CCZ), Pacific Ocean, is an area of commercial importance owing to the growing interest in mining high‐grade polymetallic nodules at the seafloor for battery metals. Research into the spatial patterns of faunal diversity, composition, and population connectivity is needed to better understand the ecological impacts of potential resource extraction. Here, a DNA taxonomy approach is used to investigate regional‐scale patterns of taxonomic and phylogenetic alpha and beta diversity, and genetic connectivity, of the dominant macrofaunal group (annelids) across a 6 million km2 region of the abyssal seafloor. Location: The abyssal seafloor (3932–5055 m depth) of the Clarion‐Clipperton Zone, equatorial Pacific Ocean. Methods: We used a combination of new and published barcode data to study 1866 polychaete specimens using molecular species delimitation. Both phylogenetic and taxonomic alpha and beta diversity metrics were used to analyse spatial patterns of biodiversity. Connectivity analyses were based on haplotype distributions for a subset of the studied taxa. Results: DNA taxonomy identified 291–314 polychaete species from the COI and 16S datasets respectively. Taxonomic and phylogenetic beta diversity between sites were relatively high and mostly explained by lineage turnover. Over half of pairwise comparisons were more phylogenetically distinct than expected based on their taxonomic diversity. Connectivity analyses in abundant, broadly distributed taxa suggest an absence of genetic structuring driven by geographical location. Main Conclusions: Species diversity in abyssal Pacific polychaetes is high relative to other deep‐sea regions. Results suggest that environmental filtering, where the environment selects against certain species, may play a significant role in regulating spatial patterns of biodiversity in the CCZ. A core group of widespread species have diverse haplotypes but are well connected over broad distances. Our data suggest that the high environmental and faunal heterogeneity of the CCZ should be considered in future policy decisions. [ABSTRACT FROM AUTHOR]

Regeneration is the process by which many animals are able to restore lost or injured body parts. After amputation of the posterior part of its body, the annelid Platynereis dumerilii is able to regenerate the pygidium, the posteriormost part of its body that bears the anus, and a subterminal growth zone containing stem cells that allows the subsequent addition of new segments. The ability to regenerate their posterior part (posterior regeneration) is promoted, in juvenile worms, by a hormone produced by the brain and is lost when this hormonal activity becomes low at the time the worms undergo their sexual maturation. By characterizing posterior regeneration at the morphological and molecular levels in worms that have been decapitated, we show that the presence of the head is essential for multiple aspects of posterior regeneration, as well as for the subsequent production of new segments. We also show that methylfarnesoate, the molecule proposed to be the brain hormone, can partially rescue the posterior regeneration defects observed in decapitated worms. Our results are therefore consistent with a key role of brain hormonal activity in the control of regeneration and growth in P. dumerilii, and support the hypothesis of the involvement of methylfarnesoate in this control. Highlights: Methylfarnesoate, a molecule proposed to be the annelid brain hormone, is involved in the control of posterior regeneration in Platynereis dumerilii. It can partially recover the posterior regeneration defects observed in decapitated worms. [ABSTRACT FROM AUTHOR]

Coinfections of two or more parasites within one host are more of a rule than an exception in nature. Interactions between coinfecting parasites can greatly affect their abundance and prevalence. Characteristics of the host, such as genetic diversity, can also affect the infection dynamics of coinfecting parasites. Here, we investigate for the first time the association of coinfection patterns of two marine apicomplexans, Rhytidocystis sp. and Selenidium pygospionis, with the genetic diversity of their host, the polychaete Pygospio elegans, from natural populations. Host genetic diversity was determined with seven microsatellite loci and summarized as allelic richness, inbreeding coefficient, and individual heterozygosity. We detected nonsignificant correlations between infection loads and both individual host heterozygosity and population genetic diversity. Prevalence and infection load of Rhytidocystis sp. were higher than those of S. pygospionis, and both varied spatially. Coinfections were common, and almost all hosts infected by S. pygospionis were also infected by Rhytidocystis sp. Rhytidocystis sp. infection load was significantly higher in dual infections. Our results suggest that factors other than host genetic diversity might be more important in marine apicomplexan infection patterns and experimental approaches would be needed to further determine how interactions between the apicomplexans and their host influence infection. [ABSTRACT FROM AUTHOR]

Organization and functioning of immune system remain unevenly studied in different taxa of lophotrochozoan animals. We analyzed transcriptomic data on coelomocytes of the lugworm Arenicola marina (Linnaeus, 1758; Annelida, Polychaeta) to gain insights into the molecular mechanisms involved in polychaete immunity. Coelomocytes are specialized motile cells populating coelomic fluid of annelids, responsible for cellular defense reactions and providing humoral immune factors. The transcriptome was enriched with immune‐related transcripts by challenging the cells in vitro with lipopolysaccharides of Escherichia coli and Zymosan from Saccharomyces cerevisiae. Our analysis revealed a multifaceted and complex internal defense system of the lugworm. A. marina possesses orthologs of proto‐complement‐like factors: six thioester‐containing proteins, a complement‐like receptor, and a MASP‐related serine protease (MReM2). A. marina coelomocytes employ pattern‐recognition receptors to detect pathogens and regulate immune responses. Among them, there are 18 Toll‐like receptors and various putative lectin‐like proteins with evolutionary conserved and taxa‐specific domains. C‐type lectins and a novel family of Gal‐binding and CUB domains containing receptors were the most abundant in the transcriptome. The array of pore‐forming proteins in the coelomocytes was surprisingly reduced compared to that of other invertebrate species. We characterized a set of conserved proteins metabolizing reactive oxygen species and nitric oxide and expanded the arsenal of potential antimicrobial peptides. Phenoloxidase activity in immune cells of lugworm is mediated only by laccase enzyme. The described repertoire of immune‐associated molecules provides valuable candidates for further functional and comparative research on the immunity of annelids. Research highlights: Lugworm coelomocytic transcriptome was assembled de novo and made available to the community.Lugworm has a complex immune system with several species‐ and higher‐taxa‐specific hallmarks.Putative immune‐related repertoire comprises evolutionary conserved and rapidly evolving genes. [ABSTRACT FROM AUTHOR]

Research on the feeding habits of batoids provides information of intra and interspecific interactions of this taxon in marine ecosystems. We analyzed 832 stomachs of nine ray species collected from the artisanal fishery on the Northwest coast of Baja California Sur (NBCS). We identified 79 prey items assembled in five trophic groups (crustaceans, fish, mollusks, polychaetes, and sipunculidae). Results indicated that the red crab Pleuroncodes planipes was the most important prey in the diet of the seven batoid species. A low dietary similarity of the rays was observed, which evidenced different feeding strategies. In this regard, we identified four well‐separated trophic guilds. Each guild was characterized by the consumption of specific prey: (1) Hypanus dipterurus and Narcine entemedor that fed mostly on polychaetes; (2) Rostroraja velezi and Gymnura marmorata fed mostly on fishes (Clupeidae and Batrachoididae); (3) Hypanus longus, Myliobatis californica, and Platyrhinoidis triseriata fed on crustaceans (Munnidae) and Sipunculus worms; and (4) Pseudobatos productus and Zapteryx exasperata fed on crustaceans (Portunidae) and fishes (Synodontidae and Batrachoididae). We concluded that batoids off the NBCS show prey sharing between the different species. [ABSTRACT FROM AUTHOR]

The distribution of species depends on the relationship with other species and the influence of abiotic factors, modulated by long‐term evolutionary and biogeographic processes. Polychaetes and fish are important components of the biota that inhabit estuarine systems, coexisting in various habitats, although the relationship between these groups and their responses to environmental variables is poorly understood. This study aimed to assess the concordance between fish and polychaete communities in three zones (inner, middle, and outer) of a tropical bay and to determine environmental influences on these communities. The raised hypothesis is that benthic fish is associated with polychaetes and that these taxonomic groups respond differently to environmental conditions. Environmental characteristics were the main drivers determining the occurrence of fish species and polychaetes families; however, no consistent relationship was observed between fish and polychaetes. Sediment granulometry seems to be an essential driver in determining polychaetes and fish distribution while turbidity and phosphorus were also important for fish. The three zones differed in both water physicochemical and sediment (nutrients and granulometry) variables, which determined their uses by different fish and polychaetes species. Only one fish species, the gerreid Eucinostomus argenteus showed a weak but significant association with the Goniadidae and Spionidae polychaetes, which may be associated with similar environmental preferences of both taxa. The lack of a consistent relationship between benthic fish and their likely invertebrate prey may be associated with the small spatial scale of this study and the early fish life stages. Most fish in shallow coastal areas are still in their early life, feeding mainly on polychaetes and other benthic macroinvertebrates, and as the area is shallow, planktonic organisms may be included in their diet, thus relieving predation pressure on benthic organisms. These findings are important to unveil relationships among different taxonomical groups and their environment. [ABSTRACT FROM AUTHOR]

The sclerotized jaw elements (scolecodonts) of polychaete annelids are rarely preserved as articulated jaw apparatuses. Here we describe a morphologically unusual, rather large, and symmetrical jaw apparatus, assigned to the new taxon Boreognathus pogorevichi gen. et sp. nov., from the Kungurian (lower Permian) of the Pechora Coal Basin, northern Cis‐Urals, Russia. Whereas the specimen is mainly preserved as a three‐dimensional external mould of the near‐complete dorsal maxillary apparatus, some organic matter comprising the original jaw wall is also retained. The new taxon combines edentate, pincer‐like first maxillae (MI) typical of the extant Labidognatha apparatus type with long slender carriers common in the Prionognatha type. Unlike the smooth MI, MII are consistently and prominently denticulated. The new genus represents a hitherto unknown type of polychaete jaw apparatus and is assigned to the Palaeozoic family Atraktoprionidae. [ABSTRACT FROM AUTHOR]

Many important ecosystem functions are underpinned by below‐ground biodiversity and processes. Marine sediments, one of the most abundant habitats on earth, are essential to the mineralisation of organic matter. However, they are increasingly polluted by urban activities leading to the loss of biodiversity and the functions they provide. While traditional sediment remediation strategies are focussed on microbial and engineering solutions, we propose that the reintroduction of below‐ground ecosystem engineers (bioturbators) is important to rehabilitate polluted sediments and drive recovery of their functions in urban coastal ecosystems.We tested this notion by introducing bioturbators to nutrient polluted sediments to assess their survival, as well as their capacity to drive biodiversity and oxygenation and their potential to remediate nutrient pollution. Polychaete worms Diopatra aciculata and clams Katelysia sp. were added to mesocosms (ex‐situ), and the worms also added to experimental plots in‐situ. Potential for remediation was assessed with measures of nutrient content.All animals survived when introduced to polluted sediments and showed no evidence of sub‐lethal effects. Worms oxygenated sediments and reduced organic matter content by up to 50% in‐situ. The worms also drove shifts in the receiving communities at all locations and increased the number of taxa at one location. On the other hand, the effects of clams were variable, showing opposite effects in organic matter content at different sites and levels of pollution.Synthesis and applications. Global seafloor habitats are becoming increasingly degraded and novel strategies that combine biodiversity restoration with remediation are urgently needed to return function. Tube‐building bioturbators can stimulate nutrient processing in sediments proving multiple functional outcomes, but these effects are dependent on the receiving environment. In areas with medium levels of pollution, they can kick‐start recovery in a feedback loop whereby bioturbation increases oxygenation and nutrient remediation, shifting sediment biodiversity and contributing to further recovery. This can drive long‐term changes in sediment communities, particularly in urban areas where unvegetated sediments are conspicuous. [ABSTRACT FROM AUTHOR]

The Late Pleistocene littoral ridges of southern South America, especially those of the north of Argentinean Patagonia, contain remains of mollusk shells with bioerosion traces. Eleven sites from marine isotope stages (2 from MIS 7, 4 from MIS 5e) and five sites from modern beaches from northern Río Negro Province, with 40 taxa (17 bivalves and 23 gastropods) were analyzed, in the area between west of Baliza San Matías and Las Grutas (41°S). Three ichnogenera were identified in deposits of MIS 7: Entobia, Gastrochaenolites (Domichnia) and Oichnus (Praedichnia) with one ichnospecies (G. torpedo). Six ichnogenera were identified in deposits of MIS 5e: Entobia, Meandropolydora, Pinaceocladichnus, Iramena, Caulostrepsis and Oichnus with one ichnospecies (O. simplex). Seven ichnogenera were identified from modern beaches: Entobia, Meandropolydora, Iramena, Caulostrepsis, Pinaceocladichnus, Gastrochaenolites (Domichnia) and Oichnus (Praedicnia), with two ichnospecies (O. simplex and O. paraboloides). On this basis, it is inferred that Pleistocene benthic communities were constituted from cheilostome bryzoans and polychaete annelids, together with drilling bivalves, predatory gastropods and overall warm‐water species of mollusks. Of these, Chama iudicai was found on Plicatula gibbosa from MIS 7 and MIS 5e. The record of warm temperature species suggests a higher sea surface temperature (SST) than the present one and/or the influence of the warm southward Brazilian Current affecting the waters of Golfo San Matías. On the modern beaches surveyed, there is an increase in polychaete annelids, cheilostome bryzoans, temperate‐cold species and drilling bivalves, as well as sandy substrate species, which together with an increase of Gastrochaenolites and Caulostrepsis, suggest a colder climate due to the greater influence of the Malvinas Current during the Holocene. [ABSTRACT FROM AUTHOR]

The Antarctic marine environment hosts diversified and highly endemic benthos owing to its unique geologic and climatic history. Current warming trends have increased the urgency of understanding Antarctic species history to predict how environmental changes will impact ecosystem functioning. Antarctic benthic lineages have traditionally been examined under three hypotheses: (1) high endemism and local radiation, (2) emergence of deep‐sea taxa through thermohaline circulation, and (3) species migrations across the Polar Front. In this study, we investigated which hypotheses best describe benthic invertebrate origins by examining Antarctic scale worms (Polynoidae). We amassed 691 polynoid sequences from the Southern Ocean and neighboring areas: the Kerguelen and Tierra del Fuego (South America) archipelagos, the Indian Ocean, and waters around New Zealand. We performed phylogenetic reconstructions to identify lineages across geographic regions, aided by mitochondrial markers cytochrome c oxidase subunit I (Cox1) and 16S ribosomal RNA (16S). Additionally, we produced haplotype networks at the species scale to examine genetic diversity, biogeographic separations, and past demography. The Cox1 dataset provided the most illuminating insights into the evolution of polynoids, with a total of 36 lineages identified. Eunoe sp. was present at Tierra del Fuego and Kerguelen, in favor of the latter acting as a migration crossroads. Harmothoe fuligineum, widespread around the Antarctic continent, was also present but isolated at Kerguelen, possibly resulting from historical freeze–thaw cycles. The genus Polyeunoa appears to have diversified prior to colonizing the continent, leading to the co‐occurrence of at least three cryptic species around the Southern and Indian Oceans. Analyses identified that nearly all populations are presently expanding following a bottleneck event, possibly caused by habitat reduction from the last glacial episodes. Findings support multiple origins for contemporary Antarctic polynoids, and some species investigated here provide information on ancestral scenarios of (re)colonization. First, it is apparent that species collected from the Antarctic continent are endemic, as the absence of closely related species in the Kerguelen and Tierra del Fuego datasets for most lineages argues in favor of Hypothesis 1 of local origin. Next, Eunoe sp. and H. fuligineum, however, support the possibility of Kerguelen and other sub‐Antarctic islands acting as a crossroads for larvae of some species, in support of Hypothesis 3. Finally, the genus Polyeunoa, conversely, is found at depths greater than 150 m and may have a deep origin, in line with Hypothesis 2. These "non endemic" groups, nevertheless, have a distribution that is either north or south of the Antarctic Polar Front, indicating that there is still a barrier to dispersal, even in the deep sea. [ABSTRACT FROM AUTHOR]

The porcelain crab Pachycheles laevidactylus is the most frequent crustacean decapod in the polychaeta sandbanks in some Brazilian locations; however, the only populational data available for this species are from Argentina. Here, we analysed the population structure, sex ratio, reproductive period, size at sexual maturity (functional and morphological) and relative growth of this species from two locations in southern Brazil. The crabs were collected seasonally during one year, sexed, counted and measured. A total of 1534 individuals were sampled, 943 in Torres and 591 in Tramandaí. There was no difference in cheliped size between sexes, while females were larger and had larger pleons than males, and this difference is related to reproduction. The sex ratio was 1:1 in both locations throughout the year. Ovigerous females were found in all seasons, with a higher frequency in the coldest seasons, but the presence of megalopae occurred exclusively in spring. The morphological sexual maturity for females was larger than the size of the smallest ovigerous female collected, as already reported for other decapods. Overall, the species starts reproducing at smaller sizes at locations closer to the edges of its distribution (northern Brazil and northern Argentina). Some differences in relative growth were found between males and females, adults and juveniles, and the implications of these differences are discussed. This study brings the first populational data of P. laevidactylus from Brazil over a year, which was compared with available studies of Porcellanidae and will be useful for comparison with future studies in tropical areas, to better understand how the biological aspects of this species vary along its wide distribution in the south‐western Atlantic. [ABSTRACT FROM AUTHOR]

Batoid (rays and skates) populations are declining worldwide, with unknown ecological consequences due to lacking consolidated data on the trophic ecology of these species. Such trends are particularly disconcerting in Mexican waters, where batoids are heavily exploited by commercial fisheries. To assess the current state of knowledge of batoid diet in this region, we conducted a meta‐analysis of 54 published stomach content analysis studies. Trophic niche was assessed from 44 total species, including variations due to sex, ontogeny, season, and region, as well as trophic overlap among species. The species assessed belonged to the taxonomic families Urotrygonidae, Dasyatidae, Potamotrygonidae, Mobulidae, Rhinopteridae, Aetobatidae, Gymnuridae, Rhinobatidae, Rajidae, Arhyncobatidae, and Narcinidae. Most of the diet studies to date were conducted in the Mexican Pacific (n = 24), whereas only three studies have come from the Mexican Atlantic, with 27 additional studies coming from other American countries from the tropical and subtropical region. Crustaceans were reported in more than 50% of the species assessed and were also generally the most important prey item, with either high (76%–100%) and medium‐high (51%–75%) importance based on dietary indices from the literature reviewed. While the diet of 40 species (91%) consisted of more than one prey type, feeding strategy analysis (Levin and Shannon–Wiener indices) of 27 species indicated that 25 were specialists and two generalists. Species diets varied with ontogeny (20%), sex (11%), region (11%), and seasonality (9%). According to the reviewed studies, interspecific diet overlap was evident in 36% of species, mainly in the family Urotrygonidae. Batoids were grouped into four trophic guilds: crustacivores (68.1%), annelidivores (primarily polychaetes) (13.6%), molluscivores (11.3%), and piscivores (6.8%), based on the literature reviewed. This study showed that most of the batoids had a specialist crustacean‐based diet. Future research should focus on species devoid of dietary data to encapsulate the trophic niche breadth of this group in Mexican waters, particularly from the Mexican Atlantic and surrounding regions. [ABSTRACT FROM AUTHOR]

Unusual conjunctions of geological phenomena in the modern environment may alert us to their potential presence in the rock record. Two erratics of Carboniferous limestone from the beach at Cleveleys on the Irish Sea coast, Lancashire, northern England bored by sponges and polychaete worms, are suggestive of potential occurrences of borings in ancient conglomerates. Such distinctive patterns of boring, commoner in crystalline veins than in limestone, are certainly unfamiliar. But borers are well‐known for invading crystalline organic substrates, such as belemnites and oysters. [ABSTRACT FROM AUTHOR]

Tiny snail‐like conchs of Pelagiella Matthew are important in discussions of lophotrochozoan and mollusc origins in the Cambrian evolutionary radiation (CER). The limited morphological features of Pelagiella conchs have led to the 'Pelagiella problem': (1) poorly distinguished Pelagiella species; (2) an exceptional genus range across all Cambrian palaeocontinents and climate belts; (3) an unparalleled genus‐lifespan (c. 31 myr) in the early Palaeozoic; and (4) the assumption that all Pelagiella spp. are gastropods, which compromises lophotrochozoan and mollusc phylogenies. The type species P. atlantoides is a gastropod, but we show that so‐called Pelagiella species with sub‐to‐triangular apertures and turbiniform conchs are not referable to the genus. Re‐evaluation of spectacular specimens of Pelagiella exigua Resser & Howell show it to be a polychaete with two apertural paleal chaetae fan arrays. Given that some modern sedentary polychaetes have paleal fan arrays, P. exigua is regarded as a likely member of the Sabellida Levinsen and is assigned to Pseudopelagiella gen. nov. Other Pelagiella spp. and forms with similar conchs are probably polychaetes not relevant to syntheses of early mollusc diversification. Pelagiellidae fam. nov. should be restricted to the late early Cambrian (c. 508 Ma) P. atlantoides. Pseudopelagiella exigua was unattached, probably benthic and lived with the apical conch surface on the sea floor, a mode of life similar to that of another family of the Sabellida, the sessile spirorbids that are cemented to substrate. Among numerous crown groups, the late early Cambrian eve of the CER included the polychaete Pseudopelagiella exigua and gastropod P. atlantoides. [ABSTRACT FROM AUTHOR]

Infestations of commercially cultured eastern oysters (Crassostrea virginica) by shell‐boring spionid polychaetes are common in the northeastern United States. Historically, infestations were attributed to Polydora websteri, also known as mud‐blister worm. Among samples of shell‐boring worms sampled from eight oyster farms in northern New England (Maine, New Hampshire, and Massachusetts), we detected P. websteri, as well as worms that were morphologically distinct from P. websteri. Using a combination of light and scanning electron microscopy, along with analysis of molecular variation at the nuclear 18S rRNA and mitochondrial cytochrome c oxidase I (COI) genes, we determined that specimens related to two other species of Polydora, Polydora onagawaensis and Polydora cornuta, were inhabiting burrows within the shells of oysters. Polydora cornuta is not recognized as a shell‐boring species and likely invades existing burrows opportunistically. Our analysis of COI sequences identified three distinct genetic lineages among specimens morphologically identified as P. cornuta; one of these lineages is much more geographically widespread than previously had been reported. Polydora onagawaensis is considered a shell‐boring species, and our article constitutes the first time this species has been documented in the Northwest Atlantic. We also provide evidence for three divergent COI genetic lineages that occur sympatrically among the specimens provisionally identified as P. onagawaensis in the northeastern United States. [ABSTRACT FROM AUTHOR]

Intertidal zonation of organisms is well studied on rocky shores but less so in soft sediment communities. On rocky shores, communities are two dimensional, with biotic factors such as competition and predation setting the lower bound of a zone, whereas abiotic factors such as desiccation set the upper bound. In soft sediment communities, these patterns persist, but with a dynamic three‐dimensional ecosystem occupied by mobile infaunal organisms, zonation can be more difficult to quantify and detect. Hemichordate worms, however, deposit fecal casts at the surface, which can be easily identified and counted, making them a potential model system for identifying zonation in soft‐sediment systems. Here, we describe the intertidal zonation of hemichordate worms at two sites in Maine and Virginia. In Virginia, Saccoglossus kowalevskii occurs in the mid‐intertidal at densities up to 500 individuals per square meter, whereas a tube‐building polychaete, Spiochaetopterus oculatus, dominates the lower intertidal. In Maine, two hemichordate species, Saccoglossus bromophenolosus and Protoglossus graveolens, co‐occur at densities up to 100 individuals per square meter in the mid‐intertidal, whereas hermit crabs and errant polychaetes are numerically dominant in the low intertidal. Despite known chemical defenses, crustaceans readily consumed hemichordates in lab assays, although polychaetes did not. In a field tethering experiment, loss rates of hemichordate‐flavored agarose pellets increased as tidal height decreased, suggesting that the lower bound of the hemichordate zone could be set by biotic forces such as crustacean predation. Additionally, a field transplant experiment found low survivorship of hemichordates transplanted to the upper intertidal, suggesting that desiccation may set their upper bound. These results are broadly consistent with prior studies of zonation in soft sediments, and expand our limited understanding of basic hemichordate ecology. [ABSTRACT FROM AUTHOR]

Environmental DNA (eDNA) metabarcoding can rapidly characterize the composition and diversity of benthic communities, thus it has high potential utility for routine assessments of benthic impacts of marine finfish farming. In this study, 126 sediment grab samples from 42 stations were collected at six salmon farms in British Columbia, Canada. Benthic community changes were assessed by both eDNA metabarcoding of metazoans and macrofaunal polychaete surveys. The latter was done by analysing 11,466 individuals using a combination of morphology‐based taxonomy and DNA barcoding. Study objectives were to: (i) compare biotic signals associated with benthic impacts of salmon farming in the two data sources, and (ii) identify potential eDNA indicators to facilitate monitoring in Canada. Alpha diversity parameters were consistently reduced near fish cage edge and negatively correlated with pore‐water sulphide concentration, with coefficients ranging from −0.62 to −0.48. Although Polychaeta are a common indicator group, the negative correlation with pore‐water sulphide concentration was much stronger for Nematoda OTU richness (correlation coefficient: −0.86) than for Polychaeta (correlation coefficient: −0.38). Presence/absence of Capitella generally agreed well between the two methods despite that they differed in the volume of sediments sampled and the molecular marker used. Multiple approaches were used to identify OTUs related to organic enrichment statuses. We demonstrate that eDNA metabarcoding generates biotic signals that could be leveraged for environmental assessment of benthic impacts of fish farms in multiple ways: both alpha diversity and Nematoda OTU richness could be used to assess the spatial extent of impact, and OTUs related to organic enrichment could be used to develop local biotic indices. [ABSTRACT FROM AUTHOR]

Boccardiella ligerica (Ferronniere, 1898) is an exotic polychaete introduced to the southwestern Atlantic Ocean. The species was described for the region 36 years ago, and no updating revision was reported to date. Here, we addressed a detailed study on morphology and abundance variations of B. ligerica in the Mar Chiquita coastal lagoon. We found that B. ligerica from Mar Chiquita shares the diagnostic characters with specimens from the original description (France), and was associated with the reef‐like structures ("reefs") of the invader polychaete Ficopomatus enigmaticus (Fauvel, 1923). B. ligerica was not found in sediments, and its distribution in reefs was independent of certain habitat features (i.e., deep or macroalgae), but seasonally, reaching the highest abundances in warm seasons (December). Our results suggest that environmental features might drive the B. ligerica population dynamic, while the substrate offered by F. enigmaticus might support B. ligerica population abundance. The present study updates the known geographic distribution of this nonindigenous species in brackish waters from the SW Atlantic Ocean and shows its association with an invasive habitat‐forming species. [ABSTRACT FROM AUTHOR]

Tidal sand waves are dynamic bedforms found in coastal shelf seas. Moreover, these areas are inhabited by numerous benthic species, of which the spatial distribution is linked to the morphological structure of sand waves. In particular, the tube‐building worm Lanice conchilegais of interest as this organism forms small mounds on the seabed, which provide shelter to other organisms. We investigate how the interactions between small‐scale mounds (height ∼⃒dm) and large‐scale sand waves (height ∼⃒m) shape the bed of the marine environment. To this end, we present a two‐way coupled process‐based model of sand waves and tube‐building worm patches in Delft3D. The population density evolves according to a general law of logistic growth, with the bed shear stress controlling the carrying capacity. Worm patches are randomly seeded and the tubes are mimicked by small cylinders that influence flow and turbulence, thereby altering sediment dynamics. Model results relate the patches with the highest worm densities to the sand wave troughs, which qualitatively agrees with field observations. Furthermore, the L. conchilegatubes trigger the formation of sandy mounds on the seabed. Because of the population density distribution, the mounds in the troughs can be several centimetres higher than on the crests. Regarding sand wave morphology, the combination of patches and mounds are found to shorten the time‐to‐equilibrium. Also, if the initial bed comprised small sinusoidal sand waves, the equilibrium wave height decreased with a few decimetres compared to the situation without worm patches. As the timescale of mound formation (years) is shorter than that of sand wave evolution (decades), the mounds induce (and accelerate) sand wave growth on a similar spatial scale to the mounds. Initially, this leads to shorter sand waves than they would be in an abiotic environment. However, near equilibrium the wavelengths tend towards their abiotic counterparts again. © 2020 The Authors. Earth Surface Processes and Landforms published by John Wiley & Sons Ltd [ABSTRACT FROM AUTHOR]

Clitellata is a major clade of Annelida comprising nearly all freshwater and terrestrial annelids as well as several marine species. We investigated clitellate phylogenetic relationships using transcriptomes sampled from 74 taxa (64 clitellates and 10 polychaetes), including multiple representatives of nearly all major clitellate higher taxa (Branchiobdellida, Capilloventridae, Crassiclitellata, Enchytraeidae, Haplotaxidae, Hirudinida, Lumbriculida, Moniligastridae, Naididae, Parvidrilidae, Phreodrilidae, Propappidae and Randiellidae). We used a number of filtered data matrices and phylogenetic analyses to examine the effects of data partitioning, missing data and compositional and branch‐length heterogeneity and used the resulting phylogenies for divergence time estimation and ancestral habitat reconstructions. All analyses and filtering methods produced a consistent, strongly supported topology in which (a) Enchytraeidae, Hirudinida, Hirudinea (here, Branchiobdellida plus Hirudinida), Lumbriculida, Lumbriculata (Lumbriculida plus Hirudinea), Phreodrilidae and Naididae are monophyletic, (b) a Parvidrilidae + Randiellidae clade is sister to the rest of Clitellata, (c) Phreodrilidae is sister to Naididae, (d) Haplotaxidae is non‐monophyletic, with some haplotaxids grouping with Crassiclitellata + Moniligastridae, (e) the Phreodrilidae + Naididae clade is sister to all other clitellates except Parvidrilidae + Randiellidae and Capilloventridae, and (f) Lumbriculata is sister to the Crassiclitellata + Moniligastridae + Haplotaxidae (in part) clade. Ancestral habitat reconstructions and divergence time analysis suggested that the most recent common ancestor of Clitellata lived in freshwater during the Devonian (419–359 million years ago) and that all major extant clitellate lineages arose over the next ~150 million years, with multiple lineages subsequently returning to marine habitats or invading land. This study provides a phylogenetic framework for further investigation of the geological, environmental and biotic forces and genomic changes that may have impacted clitellate evolution and enabled several major habitat transitions within this group. [ABSTRACT FROM AUTHOR]

Bohai Bay, a representative semi‐enclosed bay of China, has been severely impacted in recent decades by rapid human development. Although the mantis shrimp Oratosquilla oratoria plays an important role in the Bohai Bay ecosystem and fishery, its feeding ecology and the impact of habitat changes on its feeding habits are poorly known. In this study, we sought to identify its feeding strategy through the separation of stomach contents, and to describe its trophic ecology during maturation in the Tianjin coastal zone of Bohai Bay by the DNA barcoding method using a fragment (about 690 bp) of the mitochondrial cytochrome oxidase I (CO I) gene. A total of 594 specimens were collected from March to July 2018, and 347 (58.42%) stomachs were found to have food remains. More than half of the O. oratoria individuals had poor feeding activity, and the degree of feeding of females was higher than that of males, but there was no significant difference in the visual fullness index and the fullness weight index (FWI) between sexes for each month. In addition, the feeding activity of O. oratoria was consistent across the months, suggesting in artificial breeding programs it is not worried too much about the accessional diet supplied to the female bloodstocks except maintaining their normal food. A total of 167 retrieved prey items yielded 187 readable sequences; 86.63% of these sequences could be assigned to the species level. Consequently, 25 different prey taxa covering all readable sequences were identified, showing O. oratoria is a generalist predator. In terms of percent composition by frequency of occurrences (%N), crustaceans and fishes accounted for the same and highest percentage (35.83%) in the mantis shrimp diet, followed by mollusks (24.59%) and the remaining marine organisms (3.73%) including Polychaeta (2.67%), Sagittoidea (0.53%), and Chromadorea (0.53%). The result shows the benthic fish Oxudercidae (family) appears to be an especially important food supply for O. oratoria during maturation. The degree of cannibalism decreased with an increase in diet species and the frequencies of cannibalism in this study was noticeably higher than that in previous studies, suggesting that cannibalism may be a significant feeding strategy in the mantis shrimp O. oratoria in the Tianjin coastal zone of Bohai Bay, and because of the frequently cannibalistic behavior, the high stocking density of broodstocks should be avoided. [ABSTRACT FROM AUTHOR]

Polychaete worms are widespread and diverse in marine and estuarine habitats subject to varying salinity, in areas influenced by tides, demanding physiological adjustment for internal homeostasis. They are typically considered and reported to be osmoconformers, but they are not often studied for their osmoregulation. Here, three species of polychaete worms from distinct coastal habitats have been investigated: the spionid Scolelepis goodbody (intertidal in saline, exposed sandy beaches), the nereidid Laeonereis culveri (estuarine polyhaline), and the nephtyid Nephtys fluviatilis (estuarine oligohaline). The general objective here was to relate ecological aspects and physiology of the studied species. Constitutive whole body osmolality and carbonic anhydrase activity (CAA, relevant for osmoregulation, acid‐base balance and respiration) have been assayed. In addition, cell volume regulatory capacity (from whole body cell dissociation) was challenged under hypoosmotic and hyperosmotic shocks (50% intensity), with respect to isosmotic control. S. googdbody and L. culveri, the two species from most saline environments (marine/estuarine), showed higher CAA than N. fluviatilis, which, in turn, displayed a hyperosmotic gradient to water of salinity 15. Cells from S. goodbody and L. culveri showed regulatory volume decrease upon swelling, with S. goodbody showing the largest volume increase. As in other more studied marine invertebrate groups, polychaetes also show variability in their osmoregulatory physiology, related to distinct saline challenges faced in their coastal habitats. Research Highlights: Three species of marine annelids from distinct salinity regimes in coastal habitats were studied.The two most marine species had higher carbonic anhydrase activity.Cells from the three species showed distinct patterns of regulatory volume decrease. [ABSTRACT FROM AUTHOR]

Accurately mapping the extent and status of biogenic reefs formed by polychaete worms of the genus Sabellaria is of conservation importance given their protected status across Europe.Traditionally, side‐scan sonar (SSS) combined with ground‐truthing in the form of seabed photography and videography has been widely accepted as the most suitable approach for mapping these reefs in the subtidal zone. In highly turbid environments visibility at the seabed can be near zero, however, rendering optical‐based ground‐truthing redundant. Consequently, the true distribution and status of Sabellaria reefs in some shallow subtidal areas around the UK remains unclear despite their designation as Annex‐I features of several Special Areas of Conservation (SACs) under the Habitats Directive.Acoustic camera imagery (ACI) collected using acoustic cameras in two deployment configurations matched well with the backscatter signatures of seabed features in corresponding SSS data. The ACI was of suitable resolution for visualizing Sabellaria colony structures, allowing for their Annex‐I 'reef' defining attributes (extent, patchiness, and elevation) to be assessed. Colony formation 'type' was also distinguishable in the ACI, although confidence in differentiating between low‐lying Sabellaria formations and surrounding substrates was low, particularly when using a pole‐mounted configuration.This study provides a proof of concept for using acoustic cameras as tools for ground‐truthing SSS interpretation and assessing the status of Sabellaria bioconstructions in low‐visibility environments. Further development of this approach and incorporating it into statutory monitoring programmes could improve the management of the reef habitats in subtidal areas of the Severn Estuary and other highly turbid environments. [ABSTRACT FROM AUTHOR]

We report on two new lineages of the Eumida sanguinea complex from Great Britain and describe one of them as a new species using a multilocus approach, including the mitochondrial DNA COI‐5P and the nuclear markers ITS (ITS1, 5.8S rRNA and ITS2) and 28S rRNA. The molecular analysis placed Eumida mackiei sp. nov. in a monophyletic clade with 19.1% (COI), 10.1% (ITS) and 1.7% (28S) mean distance to its nearest neighbour. Molecular diagnoses were also applied to nine lineages within the E. sanguinea complex. This was complemented with morphometric data employing multivariate statistical analysis and the incorporation of statistical dissimilarities against three other described species from the complex. Eumida mackiei sp. nov. can be distinguished from E. notata and E. maia by the larger distance between the eyes and differences in morphometric proportions mainly in the dorsal and ventral cirri as well as in the prostomial appendages. E. sanguinea sensu stricto failed to produce a cluster of its own in the morphometric analysis, probably due to juvenile bias. Integrative taxonomy provided strong evidence to formally describe a new cryptic species that can now be used in biomonitoring or other relevant ecological research. [ABSTRACT FROM AUTHOR]

There is mounting evidence that the deoxygenation of coastal marine ecosystems has been underestimated, particularly in the tropics. These physical conditions appear to have far‐reaching consequences for marine communities and have been associated with mass mortalities. Yet little is known about hypoxia in tropical habitats or about the effects it has on reef‐associated benthic organisms. We explored patterns of dissolved oxygen (DO) throughout Almirante Bay, Panama and found a hypoxic gradient, with areas closest to the mainland having the largest diel variation in DO, as well as more frequent persistent hypoxia. We then designed a laboratory experiment replicating the most extreme in situ DO regime found on shallow patch reefs (3 m) to assess the response of the corallivorous fireworm, Hermodice carnaculata to hypoxia. Worms were exposed to hypoxic conditions (8 hr ~ 1 mg/L or 3.2 kPa) 16 times over an 8‐week period, and at 4 and 8 weeks, their oxygen consumption (respiration rates) was measured upon reoxygenation, along with regrowth of severed gills. Exposure to low DO resulted in worms regenerating significantly larger gills compared to worms under normoxia. This response to low DO was coupled with an ability to maintain elevated oxygen consumption/respiration rates after low DO exposure. In contrast, worms from the normoxic treatment had significantly depressed respiration rates after being exposed to low DO (week 8). This indicates that oxygen‐mediated plasticity in both gill morphology and physiology may confer tolerance to increasingly frequent and severe hypoxia in one important coral predator associated with reef decline. [ABSTRACT FROM AUTHOR]

The level of parental investment for larval nutrition may determine the life cycle in marine invertebrate species laying egg masses or capsules, where the food available for enclosed individuals would determine time and developmental stage of hatching. Most species show a unique type of larval development. However, few species are poecilogonous and combine more than one development type. Poecilogony, although scarcely studied, allows comparing different patterns of parental reproductive investment, without the phylogenetic effect of the species ancestral modes of development (phylogenetic inertia), to help to understand the factors determining life strategy evolution in marine invertebrates. The poecilogonous polychaete worm Boccardia wellingtonensis encapsulates and incubates its offspring, which then hatches as either planktotrophic larvae or benthic juveniles; while Boccardia chilensis shows a non‐poecilogonous reproductive type, producing only planktotrophic larvae. In this work, we estimated the bioenergetic and biochemical composition of brooding and non‐brooding females of B. wellingtonensis and B. chilensis to compare the costs of reproduction in these two species. Results showed that glucose, protein, lipid, and energy content were significantly higher in non‐brooding than in brooding females of B. wellingtonensis; but also contained significantly more glucose, protein, and lipid than females of B. chilensis (in absolute and relative dry weight values). The poecilogonous species showed higher energy content previous to laying offspring. Our results support the idea that the evolution of a certain reproductive and life history traits in marine invertebrates is related to adaptations in the female's reproductive investment. [ABSTRACT FROM AUTHOR]

Polychaetes are marine annelid worms that can contribute to aquaculture diversification. Its culture has been viable, and commercially attempted, but intensive production has progressed only in few countries around the world. In the countries with no production, marine polychaetes are imported or harvested. A strong and sustained research investment provided to a better understanding of the nutritional requirements and reproduction of some species. Recent studies showed new technical improvements, which can lead to an important progress in productivity and give a new impetus to the polychaete production. Some marine worm species were identified as good candidates for integrated multitrophic aquaculture. The development of cost‐effective aquaculture techniques for marine annelid worms is essential to ensure a balance between commercial interests and the preservation of ecosystems. The influence of polychaete aquaculture on the environment and vice versa raise important concerns related to ecological security and sustainability of this activity. This review focus on the main technical improvements and advances that have been made in areas as diverse as: aquaculture potential of polychaetes, reared species, main species used worldwide, and highlights biological and ecological concerns, important challenges and recommendations. [ABSTRACT FROM AUTHOR]

Aim: Sediment disturbances are important threats affecting marine biodiversity, but the variety of biological responses has not yet been synthesized. Here, we collate all available information to compare the extent of impacts across different taxonomic groups, habitat types and pathways of impact (light attenuation, suspended sediment and sedimentation). Location: Global. Time period: Data collected from 1979 to 2017. Major taxa studied: Corals, fishes, seagrasses, sponges, macroalgae, ascidians, bryozoans, crustaceans, echinoderms, molluscs and polychaetes. Methods: We used meta‐analyses to evaluate the effects of sediments across 842 observations found in 110 publications. We also evaluated some of the biological and methodological factors that could explain the variable effects observed in different studies. Results: We found a significant negative effect of sediments on behavioural responses of species, reproduction and recruitment processes, the morphology of organisms, physiology, community abundance and diversity, and species interactions. In contrast, the overall effect on the abundance of individual species was statistically non‐significant and there was a strong positive effect on abundance for sponge and polychaete species. Many individual studies described physiological effects on coral reefs, but the effects on the diversity of soft‐bottom and coral reef communities were particularly detrimental. Phototrophic species were generally more negatively impacted by sediments than heterotrophs, driven by strong physiological responses in crustose coralline algae and seagrasses. Additionally, species with limited mobility were more vulnerable to sediment disturbances than highly mobile species. Sedimentation alone triggered more consistently negative effects on most biological responses than light depletion and suspended sediments. We found evidence for increased impacts on community diversity when more than one pathway of impact was present, indicating that these disturbances can disrupt whole ecosystems. Main conclusions: Our meta‐analysis provided, for the first time, strong quantitative support of negative effects of sediments on marine biodiversity. Taxonomic groups, habitat types and life‐history characteristics were most influential in determining the biological responses to sediment disturbances, highlighting the importance of an ecosystem‐based approach when fully accounting for the impacts of sediments. [ABSTRACT FROM AUTHOR]

Summary: Settlement of many benthic marine invertebrates is stimulated by bacterial biofilms, although it is not known if patterns of settlement reflect microbial communities that are specific to discrete habitats. Here, we characterized the taxonomic and functional gene diversity (16S rRNA gene amplicon and metagenomic sequencing analyses), as well as the specific bacterial abundances, in biofilms from diverse nearby and distant locations, both inshore and offshore, and tested them for their ability to induce settlement of the biofouling tubeworm Hydroides elegans, an inhabitant of bays and harbours around the world. We found that compositions of the bacterial biofilms were site specific, with the greatest differences between inshore and offshore sites. Further, biofilms were highly diverse in their taxonomic and functional compositions across inshore sites, while relatively low diversity was found at offshore sites. Hydroides elegans settled on all biofilms tested, with settlement strongly correlated with bacterial abundance. Bacterial density in biofilms was positively correlated with biofilm age. Our results suggest that the localized distribution of H. elegans is not determined by 'selection' to locations by specific bacteria, but it is more likely linked to the prevailing local ecology and oceanographic features that affect the development of dense biofilms and the occurrence of larvae. [ABSTRACT FROM AUTHOR]

Background: foxA orthologs are involved in various processes from embryo patterning to regulation of metabolism. Since foxA conserved role in the development of the gut of errant annelids has never been thoroughly studied, we used a candidate gene approach to unravel the molecular profile of the alimentary canal in two closely related nereid worms with a trochophore‐type lecithotrophic larva. Results: The character of foxA expression in the two polychaetes was similar but not identical. The genes were successively activated first in blastoporal cells, then in the stomodeum, the midgut, and hindgut primordia, and in the cells of central and peripheral nervous system. Before the start of active feeding of nectochaetes, we observed a short phase of foxA expression in the entire digestive tract. After amputation of posterior segments, foxA expression was established de novo in the new terminal part of the intestine, and then in the developing hindgut and the anus. Conclusions: We discovered an early marker of endoderm formation previously unknown in errant annelids. Its expression dynamics provided valuable insights into the gut development. Comparative analysis of foxA activity suggests its primary role in gastrulation morphogenesis independently of its type and in midgut and foregut specification. Developmental Dynamics 248:728–743, 2019. © 2018 Wiley Periodicals, Inc. Key Findings: foxA is expressed in nereid annelids throughout the life cycle in endodermal and ectodermal tissues.In annelids, foxA expression in the blastopore lips correlates with epiboly type of gastrulation morphogenesis.foxA is the earliest known endodermal marker in errant annelids.Initiation of the foxA transcription in the regenerative bud indicates repatterning of the gut and epidermis, i.e. morphallaxis. [ABSTRACT FROM AUTHOR]

Body size is a basic animal feature that defines its functioning in multispecies assemblages. Polychaetes are numerically dominant components of marine macrobenthos, playing a key role in benthic productivity. They are also the most problematic group regarding body‐size assessments due to common fragmentation of fragile bodies during sample processing that inhibits direct assessments of their size and biomass. Here, we present quantified relationships that allow an estimation of the total‐body length based on morphometric features (widths of thoracic chaetigers) that remain intact after standard macrobenthic sample treatment. The best‐fitted regression equations (p < 0.001, r from 0.41 to 0.99) were selected for 28 polychaete families, six orders, two infraclasses, and one subclass based on the measurements on 3580 complete individuals collected in the North Atlantic (Norwegian and Spitsbergen fjords and continental margin). In Capitellidae, Cirratulidae, Oweniidae, and Trichobranchidae, the shapes of the relationships differed among dominant species/genera, and so, specific formula was proposed. The method has been applied to assess the size spectra of macrozoobenthos based on 18 van Veen grab samples collected at six stations in two Spitsbergen fjords. The percentage contribution of complete individuals in polychaete biomass and abundance in size classes varied between 0% and 43%, with the lowest percentages noted in two dominant families—Cirratulidae and Lumbrineridae. The presented method is likely to be widely applied in studies requiring polychaete individual size assessments (e.g., benthic biomass size spectra, population dynamics, and secondary production). [ABSTRACT FROM AUTHOR]

Intertidal soft‐bottom assemblages located at high latitudes provide a critical food source for long‐distance migratory animals which link biodiversity across distant areas. On the southern Pacific coasts of South America, however, comprehensive information about macrobenthic assemblages at these habitats is lacking. Here we provide an inter‐annual estimation of food supply at the southern limit of the Pacific temperate zone within a Site of Hemispheric Importance for the conservation of Arctic breeding shorebird populations during the nonbreeding season. Macrobenthic communities on Isla Grande of Chiloé are dominated by Polychaetes, Bivalves and Malacostraca. Average biomass (4.4–9.6 g ash‐free dry weight m−2) falls within the values reported for temperate intertidal areas located at around 40°S latitude. While total available biomass within each bay was similar during the three sampling years, the annual contribution of each class varied. The major contributor to zoobenthic biomass (Polychaetes) was indeed one of the main preys for the most abundant shorebird species at Chiloé. Arctic breeding migratory shorebird populations seem thus to encounter a predictable and abundant food supply at high southern latitudes on Isla Grande of Chiloé. [ABSTRACT FROM AUTHOR]

Eulalia viridis is a marine Polychaeta of the rocky intertidal that, despite its simple anatomy, is an active predator of much larger invertebrates, from which it extracts pieces of soft tissue through suction. This uncanny feeding strategy triggered the pursuit for the morphological mechanisms that enable adaptation to its environment. The evaluation of the worm anatomy and microanatomy, combining electron and optical microscopy, revealed a series of particular adaptations in the epidermis and in the proboscis (the heavily muscled eversible pharynx). Besides its function in feeding, the proboscis is the main sensory organ, being equipped with numerous sensorial papillae holding chemoreceptors. Additionally, the proboscis possesses tentacles that become exposed when the organ is everted. These provide fast release of mucus and toxins, from mucocytes and special serous cells, respectively (the latter involving both merocrine and apocrine processes), whenever contact with a prey occurs. In its turn, the epidermis provides protection by cuticle and mucus secretion and has a sensorial function that may be associated to the worm's uncommon green pigment cells. Eulalia viridis presents a series of elegant adaptive tools to cope with its environment that are evolutionarily designed to counterbalance its relatively simple body plan. [ABSTRACT FROM AUTHOR]

Gelatinous zooplankton hold key functions in the ocean and have been shown to significantly influence the transport of organic carbon to the deep sea. We discovered a gelatinous, flux‐feeding polychaete of the genus Poeobius in very high abundances in a mesoscale eddy in the tropical Atlantic Ocean, where it co‐occurred with extremely low particle concentrations. Subsequent analysis of an extensive in situ imaging dataset revealed that Poeobius sp. occurred sporadically between 5°S–20°N and 16°W–46°W in the upper 1000 m. Abundances were significantly elevated and the depth distribution compressed in anticyclonic modewater eddies (ACMEs). In two ACMEs, high Poeobius sp. abundances were associated with strongly reduced particle concentrations and fluxes in the layers directly below the polychaete. We discuss possible reasons for the elevated abundances of Poeobius sp. in ACMEs and provide estimations showing that a single zooplankton species can completely intercept the downward particle flux by feeding with their mucous nets, thereby substantially altering the biogeochemical setting within the eddy. [ABSTRACT FROM AUTHOR]

Abstract: Aim: This study examines how rafting on floating bull kelps can shape the biogeographic patterns of raft‐associated species, and analyses the spatio‐temporal variability of taxonomic richness and co‐occurrences of epibionts on beach‐cast rafts of Durvillaea antarctica along a latitudinal gradient. Location: Southeast Pacific, along ~1,700 km of coastline. Methods: We examined the epibionts on stranded individuals of D. antarctica on 33 beaches along the continental coast of Chile (28° S–42° S) within four biogeographic districts during the winter and summer of two years (2014/2015–2015/2016). Taxonomic richness and co‐occurrences of epibionts within a holdfast were examined. Known geographic ranges and rafting ranges were compared to determine possible range expansions via rafting dispersal. Results: Sessile species were the most frequent epibionts. Taxonomic richness varied among biogeographic zones and seasons, and was higher between 33° S and 42° S than between 28° S and 33° S, particularly in summer compared to winter. Taxonomic richness decreased with floating time (indicated by the presence and size of Lepas spp.). Habitat‐forming epibionts such as mytilid mussels, the polychaete Phragmatopoma moerchi and the seaweeds Gelidium lingulatum and Lessonia spicata favoured co‐occurrences of other species within a holdfast, suggesting a habitat cascade (i.e. biogenic holdfast—sessile eco‐engineers—other epibionts), while the boring isopod Limnoria chilensis and the excavating limpet Scurria scurra were negatively correlated with many other species. Some rafting epibiont species with low dispersal ability were found more than 100–300 km outside of their known geographic ranges, with more extensive ephemeral range extensions at the southern edge of their respective ranges, probably facilitated by higher availability of rafts in those areas. Main Conclusions: These findings confirm that raft‐associated species are frequently dispersed outside their known geographic ranges, although these range extensions vary strongly depending on the availability and persistence of rafts, and on the biotic interactions within the rafting assemblage. [ABSTRACT FROM AUTHOR]

Abstract: Aphroditiformia represents one of the most successful radiations of annelids, and is therefore an interesting model to understand morphological and functional evolution. Previous phylogenetic analyses yielded most families as monophyletic but excluded anchialine and interstitial species while failing to recover relationships within Sigalionidae. Here we address these shortcomings through the analysis of four molecular markers and 87 morphological characters sampled across 127 species under the assumptions of parsimony and model‐based methods. Of the 34 newly sequenced taxa, five anchialine and 24 interstitial species were included, with increased representation of Sigalionidae. An additional 28 elusive Sigalionidae taxa were included, represented only by morphological partitions. Molecular and morphological partitions were evaluated under exhaustive sensitivity analyses, testing the effects of alignment algorithms and optimization criteria on tree topologies. Our trees congruently recovered six clades corresponding to the families within Aphroditiformia: Acoetidae, Aphroditidae, Eulepethidae, Iphionidae, Polynoidae and Sigalionidae, respectively. An anchialine polynoid lineage was nested among strictly deep sea species, and interstitial pisionids and pholoids formed two independent clades nested within Sigalionidae. Additionally, Sigalionidae resulted in four clades, defined by combinations of apomorphies, and hereby we propose the subfamilies Pelogeniinae, Pholoinae, Pisioninae, Sthenelanellinae, as well as the provisionally included polyphyletic Sigalioninae. [ABSTRACT FROM AUTHOR]