1. Targeting SWI/SNF ATPases reduces neuroblastoma cell plasticity.
- Author
-
Xu, Man, Hong, Jason J, Zhang, Xiyuan, Sun, Ming, Liu, Xingyu, Kang, Jeeyoun, Stack, Hannah, Fang, Wendy, Lei, Haiyan, Lacoste, Xavier, Okada, Reona, Jung, Raina, Nguyen, Rosa, Shern, Jack F, Thiele, Carol J, and Liu, Zhihui
- Subjects
TRANSCRIPTION factors ,NEURAL crest ,INHIBITION of cellular proliferation ,CHROMATIN ,NEUROBLASTOMA ,CHROMATIN-remodeling complexes - Abstract
Tumor cell heterogeneity defines therapy responsiveness in neuroblastoma (NB), a cancer derived from neural crest cells. NB consists of two primary subtypes: adrenergic and mesenchymal. Adrenergic traits predominate in NB tumors, while mesenchymal features becomes enriched post-chemotherapy or after relapse. The interconversion between these subtypes contributes to NB lineage plasticity, but the underlying mechanisms driving this phenotypic switching remain unclear. Here, we demonstrate that SWI/SNF chromatin remodeling complex ATPases are essential in establishing an mesenchymal gene-permissive chromatin state in adrenergic-type NB, facilitating lineage plasticity. Targeting SWI/SNF ATPases with SMARCA2/4 dual degraders effectively inhibits NB cell proliferation, invasion, and notably, cellular plasticity, thereby preventing chemotherapy resistance. Mechanistically, depletion of SWI/SNF ATPases compacts cis-regulatory elements, diminishes enhancer activity, and displaces core transcription factors (MYCN, HAND2, PHOX2B, and GATA3) from DNA, thereby suppressing transcriptional programs associated with plasticity. These findings underscore the pivotal role of SWI/SNF ATPases in driving intrinsic plasticity and therapy resistance in neuroblastoma, highlighting an epigenetic target for combinational treatments in this cancer. Synopsis: Neuroblastoma (NB), a cancer derived from neural crest cells, consists primarily of two interconverting subtypes: adrenergic and mesenchymal. This study identifies the SWI/SNF chromatin remodeling complex as a context-dependent regulator of NB cell plasticity, controlling enhancer binding and chromatin accessibility of lineage-specific transcription factors. High levels of SWI/SNF ATPases increase chromatin accessibility and enhance DNA binding of core transcription factors in NB cells. In adrenergic-type NB cells, increased SWI/SNF ATPase expression reduces the epigenetic barrier, enabling mesenchymal-type transcription factors to access DNA. Enhanced SWI/SNF ATPases promote NB cell plasticity, contributing to intra-tumor heterogeneity. Targeting SWI/SNF ATPases reduces cellular plasticity and chemotherapy resistance. SWI/SNF ATPases facilitate neuroblastoma subtype interconversion from adrenergic to mesenchymal, promoting chemotherapy resistance and relapse. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF