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Since its coinage ca. 1850 AD by Philip Barker Webb, the biogeographical region of Macaronesia, consisting of the North Atlantic volcanic archipelagos of the Azores, Madeira with the tiny Selvagens, the Canaries and Cabo Verde, and for some authors different continental coastal strips, has been under dispute. Herein, after a brief introduction on the terminology and purpose of regionalism, we recover the origins of the Macaronesia name, concept and geographical adscription, as well as its biogeographical implications and how different authors have positioned themselves, using distinct terrestrial or marine floristic and/or faunistic taxa distributions and relationships for accepting or rejecting the existence of this biogeographical region. Four main issues related to Macaronesia are thoroughly discussed: (i) its independence from the Mediterranean phytogeographical region; (ii) discrepancies according to different taxa analysed; (iii) its geographical limits and the role of the continental enclave(s), and, (iv) the validity of the phytogeographical region level. We conclude that Macaronesia has its own identity and a sound phytogeographical foundation, and that this is mainly based on three different floristic components that are shared by the Macaronesian core (Madeira and the Canaries) and the outermost archipelagos (Azores and Cabo Verde). These floristic components are: (i) the Palaeotropical‐Tethyan Geoflora, formerly much more widely distributed in Europe and North Africa and currently restricted to the three northern archipelagos (the Azores, Madeira and the Canaries); (ii) the African Rand Flora, still extant in the coastal margins of Africa and Arabia, and present in the southern archipelagos (Madeira, the Canaries and Cabo Verde), and (iii) the Macaronesian neoendemic floristic component, represented in all the archipelagos, a result of allopatric diversification promoted by isolation of Mediterranean ancestors that manage to colonize Central Macaronesia and, from there, the outer archipelagos. Finally, a differentiating floristic component recently colonized the different archipelagos from the nearest continental coast, providing them with different biogeographic flavours. [ABSTRACT FROM AUTHOR]

Motivation: The intrinsic characteristics of islands make them a unique study system for the investigation of ecological and evolutionary dynamics. The Mediterranean Basin, an island‐rich biodiversity hotspot, still lacks a comprehensive spatial database for these geographic features. This study presents the first comprehensive spatial database of all Mediterranean islands larger than 0.01 km2, aiding ecological investigations and interdisciplinary research. Main types of variable contained: The MEDIS spatial database offers detailed information on 39 geographic, climatic, ecological and land‐use variables, including island area, perimeter, isolation metrics, climatic space, terrain data, land cover, palaeogeography, road networks and geological information, providing a multifaceted view of each island's characteristics. Spatial location and grain: The study encompasses 2217 islands in the Mediterranean Basin larger than 0.01 km2. The spatial grain of the datasets on which the selected variables are based varies from 10 m (ESA WorldCover) to 1 km (CHELSA‐BIOCLIM+). Time period and grain: The spatial database incorporates data from various sources, each with its own timeframe, such as the Global Shoreline Vector from 2014 Landsat imagery and the WorldCover dataset from 2021. Historical data like the Paleocoastlines GIS dataset offer insights into island configurations during the Last Glacial Maximum. Major taxa and level of measurement: While not focusing on specific taxa, the study lays the foundation for comprehensive research on Mediterranean islands, facilitating comparisons and investigations into the distribution of native, endemic or alien species. The level of measurement is extensive, encompassing a wide range of variables and providing polygonal features rather than centroids' coordinates. [ABSTRACT FROM AUTHOR]

Warm drylands represent 19% of land surfaces worldwide and host ca. 1100 tree species. The risk of decline due to climate aridification of this neglected biodiversity has been overlooked despite its ecological and societal importance. To fill this gap, we assessed the risk of decline due to climate aridification of tree species in warm drylands based on spatialized occurrence data and climate models. We considered both species vulnerability and exposure, compared the risk of tree species decline across five bioregions and searched for phylogenetic correlates. Depending on the future climate model, from 44% to 88% of warm drylands' tree species will undergo climate aridification with a high risk of decline even under the most optimistic conditions. On a regional scale, the rate of species that will undergo climate aridification in the future varies from 21% in the Old World North, to 90% in Australia, with a risk of decline confirming the high level of risk predicted at the global scale. Using generalized linear mixed models, we found that, species more exposed to climate aridification will be more at risk, but also that species vulnerability is a key driver of their risk of decline. Indeed, the warm drylands specialist species will be less at risk due to climate aridification than species being marginal in warm drylands. We also found that the risk of decline is widespread across the main clades of the phylogeny and involves several evolutionary distinct species. Estimating a high risk of decline for numerous tree species in all warm drylands, including emblematic dryland endemics, our work warns that future increase in aridity could result in an extensive erosion of tree biodiversity in these ecosystems. [ABSTRACT FROM AUTHOR]

In the context of global warming, a clear understanding of microrefugia—microsites enabling the survival of species populations outside their main range limits—is crucial. Several studies have identified forcing factors that are thought to favor the existence of microrefugia. However, there is a lack of evidence to conclude whether, and to what extent, the climate encountered within existing microrefugia differs from the surrounding climate. To investigate this, we adopt a “bottom-up” approach, linking marginal disconnected populations to microclimate. We used the southernmost disconnected and abyssal populations of the circumboreal herbaceous plant Oxalis acetosella in Southern France to study whether populations in sites matching the definition of “microrefugia” occur in particularly favorable climatic conditions compared to neighboring control plots located at distances of between 50 to 100 m. Temperatures were recorded in putative microrefugia and in neighboring plots for approximately 2 years to quantify their thermal offsets. Vascular plant inventories were carried out to test whether plant communities also reflect microclimatic offsets. We found that current microclimatic dynamics are genuinely at stake in microrefugia. Microrefugia climates are systematically colder compared to those found in neighboring control plots. This pattern was more noticeable during the summer months. Abyssal populations showed stronger offsets compared to neighboring plots than the putative microrefugia occurring at higher altitudes. Plant communities demonstrate this strong spatial climatic variability, even at such a microscale approach, as species compositions systematically differed between the two plots, with species more adapted to colder and moister conditions in microrefugia compared to the surrounding area. [ABSTRACT FROM AUTHOR]

Intense research efforts over the last two decades have renewed our understanding of plant phylogeography and domestication in the Mediterranean basin. Here we aim to investigate the evolutionary history and the origin of domestication of the carob tree (Ceratonia siliqua), which has been cultivated for millennia for food and fodder. We used >1000 microsatellite genotypes to delimit seven carob evolutionary units (CEUs). We investigated genome‐wide diversity and evolutionary patterns of the CEUs with 3557 single nucleotide polymorphisms generated by restriction‐site associated DNA sequencing (RADseq). To address the complex wild vs. cultivated status of sampled trees, we classified 56 sampled populations across the Mediterranean basin as wild, seminatural or cultivated. Nuclear and cytoplasmic loci were identified from RADseq data and separated for analyses. Phylogenetic analyses of these genomic‐wide data allowed us to resolve west‐to‐east expansions from a single long‐term refugium probably located in the foothills of the High Atlas Mountains near the Atlantic coast. Our findings support multiple origins of domestication with a low impact on the genetic diversity at range‐wide level. The carob was mostly domesticated from locally selected wild genotypes and scattered long‐distance westward dispersals of domesticated varieties by humans, concomitant with major historical migrations by Romans, Greeks and Arabs. Ex situ efforts to preserve carob genetic resources should prioritize accessions from both western and eastern populations, with emphasis on the most differentiated CEUs situated in southwest Morocco, south Spain and eastern Mediterranean. Our study highlights the relevance of wild and seminatural habitats in the conservation of genetic resources for cultivated trees. [ABSTRACT FROM AUTHOR]

Aims: Aeolian islands form an active volcanic archipelago. By using updated vascular plant checklists for islands and islets, we tested four hypotheses: (i) Island species–area relationship (ISAR) of alien species has lower c‐ and higher z‐values than native species, (ii) islands with active volcanoes have lower species richness than expected for native and alien species, (iii) ISAR of native species shows lower c‐ and higher z‐values than ISARs of Mediterranean land bridge archipelagos and (iv) species richness of smaller islets is independent of area. Location: Aeolian Archipelago, Mediterranean Basin. Taxon: Vascular plants, identified and named according to the Flora of Italy (Pignatti et al., 2017–2019). Methods: Checklists of native and alien plant species were obtained for eight islands and 24 islets. ISARs were fitted by the Arrhenius power function (S=c·Az) and used to test the first two hypotheses. The third hypothesis was tested by comparing ISAR of Aeolian Archipelago to those from other central and eastern Mediterranean archipelagos. The fourth hypothesis was tested by fitting models defining the presence and limit of the small‐island effect. Results: The checklists included 894 species—749 native and 145 alien. ISARs fitted well for native and alien species and resulted in typical values of c and z parameters. The first and second hypotheses were supported by model fitting. The third hypothesis was not confirmed by the comparison of the ISAR of the Aeolian Archipelago with other archipelagos. The small‐island effect predicted by the fourth hypothesis was supported using S versus LogA for both native and alien species, while for native species it was supported also using the log transformation of the Arrhenius model. Main conclusions: We reported a first comprehensive analysis of plant species richness in the unique Aeolian Archipelago, verifying typical ISARs, no peculiarity with respect to land bridge archipelagos and a somewhat unclear signal for the small‐island effect. [ABSTRACT FROM AUTHOR]

Aim: The Mediterranean Basin is a major hotspot of plant biodiversity, including forest trees. Over the past centuries, Mediterranean forests have been fragmented and over‐exploited, to which the threats of climate change are now added. Our aim is to better understand patterns and processes of tree biodiversity in the Mediterranean and to provide indicators complementing the traditional approaches to biodiversity conservation based on species counts and occurrences, using georeferenced phylogenetic diversity and endemism analyses in a spatial ecological context. Location: Mediterranean Europe. Methods: Using a dated phylogeny of the 64 Euro‐Mediterranean tree genera, we calculated phylogenetic diversity for all 50 × 50 km2 grid cells spanning Mediterranean Europe (n = 643) and compared values with those obtained for genus‐level taxonomic diversity. Then, we tested the relative influence of geography, past and present climate, and soil on tree diversity (phylogenetic or taxonomic) and its geographical turnover. Geographical patterns of phylogenetic endemism were inferred using the Categorical Analyses of Neo‐ and Paleo‐Endemism (CANAPE) methodology. Results: We showed that phylogenetic and taxonomic diversity within and among cells are correlated and influenced by soil parameters as well as current, Holocene and Late Glacial Maximum climate. Southern Spain, Cyprus and some Aegean islands contained areas of disproportionately high phylogenetic diversity and a concentration of phylogenetic paleo‐endemics, while phylogenetic neo‐endemism was high in eastern Sicily. Mixed phylogenetic endemism regions were detected in southern Spain and Portugal, in the Balkans and in Crete. Main conclusions: Our phylogenetic approach provides relevant indicators for better protecting forests of the Mediterranean, encompassing past and present evolutionary processes and factors. We consider areas that show a concentration of evolutionary history manifested by high phylogenetic endemism as high priority targets for the conservation of the European tree flora. [ABSTRACT FROM AUTHOR]

Aim: Phylogeography of fruit trees is challenging due to recurrent exchanges between domesticated and wild populations. Here we tested the eastern refugium hypothesis (ERH) for the carob tree, Ceratonia siliqua, which supports its natural and domestication origins in the eastern Mediterranean and a feral origin in the west. Location: Mediterranean basin. Taxon: Ceratonia siliqua L., Leguminosae. Methods: A phylogenetic reconstruction based on two nuclear and one plastid sequences was performed to estimate the divergence time between the carob tree and its sister species, Ceratonia oreothauma. Variation from four plastid regions and 17 nuclear microsatellite loci were used to decipher genetic structure in the carob tree and to test coalescent‐based models by an Approximate Bayesian computation (ABC) approach. We assessed our hypotheses by examining palaeobotanical records and hindcasting the past distribution of the carob tree at Mid‐Holocene, Last Glacial Maximum (LGM) and Last Interglacial (LIG) using species distribution modelling. Results: The split between C. oreothauma and C. siliqua was estimated at 6.4 Ma, and a first divergence within C. siliqua at 1.3 Ma. After a continuous presence since the Oligocene, Ceratonia was rarely found in the fossil record during the Pleistocene but present in the western and the eastern Mediterranean. Plastid and nuclear markers, characterized by low allelic richness, revealed a strong west‐east genetic structuring. ABC analyses rejected the ERH. Main conclusions: Our study supports a severe population decline during LIG. The strong west–east divergence and the occurrence of four lineages within C. siliqua provided support for a new hypothesis of multiple domestications of the carob tree from native populations throughout the Mediterranean basin. [ABSTRACT FROM AUTHOR]

Questions Are variable effects of different phenotypes of foundation plant species on subordinates across contrasting habitat conditions (with varying stress and disturbance levels) due to either varying environmental conditions or heritable differences in traits between phenotypes? To evaluate the contribution of environmental effects we quantified the effects of contrasting phenotypes of a foundation legume shrub on their subordinate species across exposure (drought stress) and grazing conditions. Location A sub-alpine xerophytic community of western Mount Lebanon, Lebanon. Methods For two phenotypes of the spiny cushion shrub Onobrychis cornuta, a facilitative phenotype that occurs in concave topographies (mesic soil) and a competitive phenotype that occurs in convex topographies (xeric soil), we quantified cushion traits, environmental conditions and subordinate plant species abundances (within and outside the cushions) for the two phenotypes in northern (low stress) and southern (high stress) exposures, and with and without grazing. Relative interaction index ( RII) for subordinate species richness and abundance was calculated in the eight treatment combinations and a correspondence analysis ( CA) was conducted on species composition. Results Drought stress exacerbated phenotypic effects in southern exposure, with loose phenotypes being more facilitative and tight phenotypes more competitive than in northern exposure. This was related to both changes in cushion traits of the two phenotypes and to an increase in the pool of subordinate species sensitive to cushion effects. In contrast, grazing increased cushion positive effects of both phenotypes through the occurrence of indirect facilitation, with loose phenotypes becoming more facilitative and tight phenotypes less competitive. This was due both to changes in cushion traits of the two phenotypes and to their shared spiny phenotype limiting grazing effects. Conclusions Because increasing stress from northern to southern exposure did not increase competitive effects of either phenotype, and because the cessation of grazing did not cancel out differences in facilitative effects between phenotypes, neither drought stress nor grazing disturbance appeared to be the main drivers of the observed phenotypic effects on subordinate species across habitats. We conclude that differences in phenotypic effects of this legume shrub are very likely due to heritable differences in traits between phenotypes. [ABSTRACT FROM AUTHOR]

BACKGROUND Black rats, Rattus rattus, and mat-forming iceplants, Carpobrotus aff. acinaciformis and Carpobrotus edulis, are pervasive pests on Mediterranean islands. Their cumulative impacts on native biotas alter the functioning of island ecosystems and threaten biodiversity. A report is given here of the first attempt to eradicate both taxa from a protected nature reserve in south-eastern France (Bagaud Island). In order to minimise unwanted hazardous outcomes and produce scientific knowledge, the operations were embedded in a four-step strategy including initial site assessment, planning, restoration and monitoring. RESULTS Trapping, which resulted in the removal of 1923 rats in 21 045 trap-nights, made it possible to eliminate a substantial proportion of the resident rat population and to reduce the amount of rodenticide delivered in the second stage of the operation. Forty tons of Carpobrotus spp. were manually uprooted from a total area of 18 000 m2; yet careful monitoring over a decade is still required to prevent germinations from the seed bank. CONCLUSION Two years after the beginning of the interventions, both eradication operations are still ongoing. Biosecurity measures have been implemented to reduce reinvasion risks of both taxa. With the long-term monitoring of various native plants and animals, Bagaud Island will become a reference study site for scientific purposes. © 2014 Society of Chemical Industry [ABSTRACT FROM AUTHOR]

Aim The Mediterranean region is often regarded as a crossroads where species of various origins meet. However, the biogeographical relationships between this region and contiguous Saharan, Macaronesian and Irano-Turanian regions have not been investigated in detail. The aim of this study was to characterize the phylogeography of the circum-Mediterranean species Myrtus communis and to investigate the origin of isolated central Saharan populations of Myrtus nivellei. Location The distribution ranges of M. communis from Macaronesia to the Irano-Turanian region (173 sampled populations) and of M. nivellei in the mountains (Hoggar, Tassili n'Ajjer, Immidir, Tibesti) of the central Sahara (23 populations). Methods Nuclear ribosomal DNA (nrDNA) sequences of Myrtaceae were used to root the phylogeny of Myrtus, and to date its crown node, according to a detailed review of the palaeobotanical records used for multiple fossil calibration. Chloroplast DNA (cpDNA) sequences were analysed through the determination of genetic diversity indices and by statistical phylogeography. Results Both cpDNA and nrDNA markers indicated east-west genetic differentiation within M. communis. During the late Miocene, a key vicariance event affected the previous circum-Mediterranean distribution of Myrtus, leading to the isolation of eastern populations. During the late Miocene or early Pliocene, two clades diverged: one is now scattered in the Mediterranean Basin and adjacent regions, whereas the other evolved in the western Mediterranean region. The differentiation of lineages during the Plio-Pleistocene occurred mainly in the western part of the Mediterranean Basin, which has been at the origin of migrations towards Macaronesian islands and Saharan mountains. This is one of the first plant phylogeographical studies to report migrations from the Mediterranean to the Sahara. Main conclusions The genus Myrtus has persisted in the Mediterranean region since at least the Neogene and its biogeography reflects the cumulation of the species' responses to successive palaeoenvironmental changes. The current distribution of the genus Myrtus in the Mediterranean Basin and in isolated areas, such as the Macaronesian islands and Saharan mountains, can be explained by the striking ability of this plant not only to persist locally in various refugia, but also to migrate. [ABSTRACT FROM AUTHOR]

The island of Corsica is a Mediterranean hotspot of plant biodiversity characterized by a high rate of plant endemism, but also by a lack of studies combining genetic diversity and conservation. In Corsica, the dioecious and Corso-Sardinian endemic Mercurialis corsica Cosson (Euphorbiaceae) occurs across a wide ecological gradient, but the number of populations have decreased considerably over the last century. The main aim of this study was to examine the patterns of genetic diversity occurring in the Corsican populations of M. corsica, depending on their location and demographic structure. The rDNA sequences did not show the existence of any polymorphism, whereas the cpDNA sequences revealed the divergence of the western Corsican populations. By contrast, when the AFLP markers were examined, although significant levels of differentiation were detected between populations, no distinct geographical patterns were observed except for the pronounced isolation of the Cap Corse genotypes. No significant correlations were found to exist between population size and the genetic diversity indexes used. The results of this study suggest that M. corsica has undergone a complex gene flow history involving past population admixtures, followed by fragmentation processes resulting in population differentiation but no geographical patterns of isolation. These results support the existence of three evolutive conservation units which have to be monitored in priority to determine whether the current pattern of demographic structure is still declining or has stabilized. [ABSTRACT FROM AUTHOR]

Aim The aims of this study were to assess the distribution of putative Mediterranean refugia of plants, to compare the locations of refugia and those of regional hotspots of plant biodiversity, and to provide a critical analysis of the Mediterranean refugium paradigm. Furthermore, we consider how biogeographical and genetic results can be combined to guide global conservation strategies. Location The Mediterranean region. Methods We started from a detailed analysis of the scientific literature (1993–2007) in order to identify refugia in the Mediterranean region, based on intra-specific phylogeographical studies of plant species. We used population locations together with gene-pool identity to establish the database, comparing patterns of phylogeographical concordance with the locations of Mediterranean refugia. We then tested the biogeographical congruence between two biodiversity components, namely phylogeographical refugia and regional hotspots. Results We identified 52 refugia in the Mediterranean bioclimatic region and confirmed the role played by the three major peninsulas, with a shared total of 25 refugia. We emphasize the importance of areas that have previously been attributed a lesser role (large Mediterranean islands, North Africa, Turkey, Catalonia). Of the 52 refugia identified, 33 are situated in the western Mediterranean Basin and 19 in the eastern part. The locations of the phylogeographically defined refugia are significantly associated with the 10 regional hotspots of plant biodiversity, with 26 of these refugia (i.e. 50%) occurring within the hotspots. Main conclusions The locations of refugia are determined by complex historical and environmental factors, the cumulative effects of which need to be considered because they have occurred since the Tertiary, rather than solely during the last glacial period. Refugia represent climatically stable areas and constitute a high conservation priority as key areas for the long-term persistence of species and genetic diversity, especially given the threat posed by the extensive environmental change processes operating in the Mediterranean region. The refugia defined here represent ‘phylogeographical hotspots’; that is, significant reservoirs of unique genetic diversity favourable to the evolutionary processes of Mediterranean plant species. [ABSTRACT FROM AUTHOR]

Although some invasive plants are cosmopolitan, not all ecosystems are invaded to the same degree. Yet there is little experimental work on how ecosystem resistance to invasion at the establishment phase differs among ecosystems. We conducted two field sowing experiments in two consecutive years to examine establishment of the deciduous tree Ailanthus altissima, the succulent subshrub Carpobrotus spp. and the annual geophyte Oxalis pes-caprae in coastal dunes, shrublands and oldfields in more than 200 sites across six Mediterranean Basin islands differing in climatic conditions and local species richness. Establishment success (i.e. percentage of plots with at least one seedling) and rates (i.e. seedling to sown seed ratio) were low, especially for Ailanthus even when accounting for differences in seed viability. Oxalis was capable of producing a new cohort of seedlings the year following planting. By contrast, all Ailanthus seedlings and half the Carpobrotus seedlings died following the first summer. Differences in establishment success and rates among ecosystems were species-, island- and year-dependent. Differences in precipitation and mean temperature were associated with differences in establishment rates across sites. Establishment rates tended to be positively correlated with cumulative precipitation and negatively with mean Ta. Unexpectedly, native species richness was not a good predictor of seedling establishment, except for higher Oxalis establishment success in species rich habitats. By conducting field sowing tests at multiple sites across a region we found that except for Oxalis, Mediterranean island ecosystems are quite resistant to invader establishment. These results suggest that differences in the degree of invasion between ecosystems and islands might be more dependent upon the influence of invasion event factors (e.g. propagule pressure) or factors acting at a later life-history stages rather than differences in the resistance imposed by ecosystems to invader recruitment. Moreover, our results support the notion that in Mediterranean ecosystems invasions are highly idiosyncratic events and strongly dependent on water availability conditions. [ABSTRACT FROM AUTHOR]

The aim of this study was to test a method to locate all the foci, centres, and areas of endemism in a biodiversity hotspot in order to understand the influence of ecological and historical factors on the distribution pattern and to identify priority areas for future conservation projects. The study area was the Maritime and Ligurian Alps hotspot. Analyses were performed on the presence/absence matrix of 36 vascular plant taxa endemic to the study area. For each operational geographical unit, the number of endemic taxa present was counted. Additionally, the weighted endemism value was calculated. Areas of endemism were distinguished using cluster analysis and parsimony analysis of endemicity. The influence of ecological characteristics and historical factors was evaluated using Multi-Response Permutation Procedure and the Nonparametric Multiplicative Regression. The Indicator Species Analysis (INDVAL) method was used to identify the species characterizing the areas of endemism. Our results show the importance and location of four main areas of endemism within the Maritime and Ligurian Alps and explain the distribution pattern of endemic plants. These areas are easily interpreted by historical and ecological factors, and INDVAL indicates which taxa took part in the history of each endemism area. [ABSTRACT FROM AUTHOR]

Aims Although biological invasions occur throughout the world, and some invaders are widespread in many habitats, few studies on the ecological impact of invaders have examined multiple sites. We tested how the impact of three widespread plant invaders changed depending on the identity of the species and the invaded island. We also tested whether relative species loss was lower in species-rich communities than in species-poor ones. Location We conducted floristic surveys and soil analyses in eight Mediterranean Basin islands: Crete and Lesbos (Greece), Sardinia (Italy), Corsica, Bagaud and Porquerolles (France), and Mallorca and Menorca (Spain). Methods We compared native species richness and diversity, proportion of life forms, soil percentage nitrogen, percentage organic carbon, C/N, and soil pH in nearby paired plots of 2 × 2 m: one control and one invaded by either the deciduous tree Ailanthus altissima, the succulent subshrubs Carpobrotus spp. or the annual geophyte Oxalis pes-caprae, across eight Mediterranean Basin islands. Results On average, the presence of invaders reduced species diversity, Carpobrotus spp. exhibiting the largest impact and Oxalis the least. However, the relative impact was island-dependent, and was positively but weakly associated with the species richness of the recipient community. Therophytes were the life form that experienced the largest decrease across islands. The effects of invasion on soil properties were very variable. Total N changed (increased) only in plots invaded by Ailanthus, significantly decreasing the C/N ratio. The presence of this tree increased soil pH, whereas the opposite was found in plots invaded by the other two species. Organic C increased in plots invaded by Ailanthus and Carpobrotus species. Main conclusions By conducting an analysis at multiple sites, we found that the three plant invaders had an impact on plant community structure not entirely concordant with changes in soil properties. The impacts depended on the identity of the species and of the invaded island, suggesting that impact of invaders is context-specific. The impact in terms of species loss was not lower in species-rich than in species-poor communities. [ABSTRACT FROM AUTHOR]

The Maritime and Ligurian Alps represent a regional hotspot of plant biodiversity found in the Mediterranean. Historical factors, complex geomorphology and habitat diversity may have played key roles to mould the bio-geographical singularity of this area. This study represents the first regional phylogeographic attempt to better assess the complex evolutionary history of an endemic plant (Gentiana ligustica), which is found throughout this hotspot, across a large altitudinal and ecological gradient. Here, we examine how historical and topographical factors have affected the geographic structure of sequence variation at internal transcribed spacers (ITS) of ribosomal DNA. Sequence data revealed a fine-scale geographical structure of molecular variation, and the presence of contact areas between groups of populations differentiated by ITS ribotypes. A comparison between the sequence distribution and topography suggests that the genetic structure of G. ligustica is the result of isolation and drift. Combined phylogeographic, Pleistocene glaciation, topographic and geologic data suggest the presence of several genetically differentiated refugia, at the margins of the ice sheets in the southern part of the Maritime and Ligurian Alps during the last two glaciations (Riss and Würm), as well as in some valleys and cliffs during the Würm. [ABSTRACT FROM AUTHOR]

Focuses on the need for global plant conservation strategies in the Mediterranean Basin. Performance of a global survey of plant richness and endemism; Diversification of countries based on plant endemism, species richness and political boundaries; Identification of important targets within ecoregions.

Premise of the Study: Simple sequence repeat (SSR) or microsatellite markers have been used in a broad range of studies mostly scoring alleles on the basis of amplicon size as a proxy for the number of repeat units of an SSR motif. However, additional sources of variation within the SSR or in the flanking regions have largely remained undetected. Methods: In this study, we implemented a next‐generation sequencing–based genotyping approach in a newly characterized set of 18 nuclear SSR markers for the carob tree, Ceratonia siliqua. Our aim was to evaluate the effect of three different methods of scoring molecular variation present within microsatellite markers on the genetic diversity and structure results. Results: The analysis of the sequences of 77 multilocus genotypes from four populations revealed SSR variation and additional sources of polymorphism in 87% of the loci analyzed (42 single‐nucleotide polymorphisms and five insertion/deletion polymorphisms), as well as divergent paralog copies in two loci. Ignoring sequence variation under standard amplicon size genotyping resulted in incorrect identification of 69% of the alleles, with important effects on the genetic diversity and structure estimates. Discussion: Next‐generation sequencing allows the detection and scoring of SSRs, single‐nucleotide polymorphisms, and insertion/deletion polymorphisms to increase the resolution of population genetic studies. [ABSTRACT FROM AUTHOR]