1. Automatic muscle and fat segmentation in the thigh from T1-Weighted MRI.
- Author
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Orgiu, Sara, Lafortuna, Claudio L., Rastelli, Fabio, Cadioli, Marcello, Falini, Andrea, and Rizzo, Giovanna
- Abstract
Purpose: To introduce and validate an automatic segmentation method for the discrimination of skeletal muscle (SM), and adipose tissue (AT) components (subcutaneous adipose tissue [SAT] and intermuscular adipose tissue [IMAT]) from T1-weighted (T1 -W) magnetic resonance imaging (MRI) images of the thigh.Materials and Methods: Eighteen subjects underwent an MRI examination on a 1.5T Philips Achieva scanner. Acquisition was performed using a T1 -W sequence (TR = 550 msec, TE = 15 msec), pixel size between 0.81-1.28 mm, slice thickness of 6 mm. Bone, AT, and SM were discriminated using a fuzzy c-mean algorithm and morphologic operators. The muscle fascia that separates SAT from IMAT was detected by integrating a morphological-based segmentation with an active contour Snake. The method was validated on five young normal weight, five older normal weight, and five older obese females, comparing automatic with manual segmentations.Results: We reported good performance in the extraction of SM, AT, and bone in each subject typology (mean sensitivity above 96%, mean relative area difference of 1.8%, 2.7%, and 2.5%, respectively). A mean distance between contours pairs of 0.81 mm and a mean percentage of contour points with distance smaller than 2 pixels of 86.2% were obtained in the muscle fascia identification. Significant correlation was also found between manual and automatic IMAT and SAT cross-sectional areas in all subject typologies (p < 0.001).Conclusion: The proposed automatic segmentation approach provides adequate thigh tissue segmentation and may be helpful in studies of regional composition. [ABSTRACT FROM AUTHOR]- Published
- 2016
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