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Fecundity, the number of young produced by a breeding pair during a breeding season, is a primary component in evolutionary and ecological theory and applications. Fecundity can be influenced by many environmental factors and requires long‐term study due to the range of variation in ecosystem dynamics. Fecundity data often include a large proportion of zeros when many pairs fail to produce any young during a breeding season due to nest failure or when all young die independently after fledging. We conducted color banding and monthly censuses of Florida scrub‐jays (Aphelocoma coerulescens) across 31 years, 15 populations, and 761 territories along central Florida's Atlantic coast. We quantified how fecundity (juveniles/pair‐year) was influenced by habitat quality, presence/absence of nonbreeders, population density, breeder experience, and rainfall, with a zero‐inflated Bayesian hierarchical model including both a Bernoulli (e.g., brood success) and a Poisson (counts of young) submodel, and random effects for year, population, and territory. The results identified the importance of increasing "strong" quality habitat, which was a mid‐successional state related to fire frequency and extent, because strong territories, and the proportion of strong territories in the overall population, influenced fecundity of breeding pairs. Populations subject to supplementary feeding also had greater fecundity. Territory size, population density, breeder experience, and rainfall surprisingly had no or small effects. Different mechanisms appeared to cause annual variation in fecundity, as estimates of random effects were not correlated between the success and count submodels. The increased fecundity for pairs with nonbreeders, compared to pairs without, identified empirical research needed to understand how the proportion of low‐quality habitats influences population recovery and sustainability, because dispersal into low‐quality habitats can drain nonbreeders from strong territories and decrease overall fecundity. We also describe how long‐term study resulted in reversals in our understanding because of complications involving habitat quality, sociobiology, and population density. [ABSTRACT FROM AUTHOR]

Adult nonbreeders are important for the stability and conservation of many species despite that their functional roles are often undervalued. Nonbreeders can buffer breeding population sizes and help their kin raise new generations of offspring, but in high numbers can compete and have negative effects. Long‐term studies are useful for elucidating relationships among nonbreeder population parameters, such as density, survival, and transitions to breeding status. Florida scrub‐jays are cooperative breeders where young delay breeding often for many years and are at risk of extinction across most of their range. Our objectives were to estimate how population covariates (pair density and mean family size) influenced Florida scrub‐jay adult nonbreeder survival and breeding transitions using long‐term data of uniquely marked birds and multistate capture–recapture models. The evolution and maintenance of Florida scrub‐jay delayed breeding has been attributed to living in crowded and sharply delineated habitat at Archbold Biological Station, the site of longest long‐term study. Contrastingly, most habitat we studied had a dynamic mixture of habitat quality with mean family sizes and pair densities much lower than the stable, optimal habitat at Archbold Biological Station. Despite having densities below carrying capacity, Florida scrub‐jays still delayed breeding. We found that greater mean family size was associated with greater breeder survival, possibly because nonbreeders contributed to predator detection and territory defense. Nonbreeder‐to‐breeder transitions increased with increased annual breeder mortality rates but were influenced little by population densities. Most Florida scrub‐jays became breeders by replacing dead breeders within occupied territories, and many male and female nonbreeders inherited their territories upon the death of their parents. Nonbreeders buffered changes in the breeding population supporting greater recognition of nonbreeder population roles within field and modeling studies. [ABSTRACT FROM AUTHOR]

The combined effects of fire history, climate, and landscape features (e.g., edges) on habitat specialists need greater focus in fire ecology studies, which usually only emphasize characteristics of the most recent fire. Florida scrub-jays are an imperiled, territorial species that prefer medium (1.2–1.7 m) shrub heights, which are dynamic because of frequent fires. We measured short, medium, and tall habitat quality states annually within 10-ha grid cells (that represented potential territories) because fires and vegetative recovery cause annual variation in habitat quality. We used multistate models and model selection to test competing hypotheses about how transition probabilities vary between states as functions of environmental covariates. Covariates included vegetative type, edges (e.g., roads and forests), precipitation, openings (gaps between shrubs), mechanical cutting, and fire characteristics. Fire characteristics not only included an annual presence/absence of fire covariate, but also fire history covariates: time since the previous fire, the longest fire-free interval, and the number of repeated fires. Statistical models with support included many covariates for each transition probability, often including fire history, interactions, and nonlinear relationships. Tall territories resulted from 28 yr of fire suppression and habitat fragmentation that reduced the spread of fires across landscapes. Despite 35 yr of habitat restoration and prescribed fires, half the territories remained tall, suggesting a regime shift to a less desirable habitat condition. Edges reduced the effectiveness of fires in setting degraded scrub and flatwoods into earlier successional states, making mechanical cutting an important tool to compliment frequent prescribed fires. [ABSTRACT FROM AUTHOR]

Many ecosystems are influenced by disturbances that create specific successional states and habitat structures that species need to persist. Estimating transition probabilities between habitat states and modeling the factors that influence such transitions have many applications for investigating and managing disturbance-prone ecosystems. We identify the correspondence between multistate capture-recapture models and Markov models of habitat dynamics. We exploit this correspondence by fitting and comparing competing models of different ecological covariates affecting habitat transition probabilities in Florida scrub and flatwoods, a habitat important to many unique plants and animals. We subdivided a large scrub and flatwoods ecosystem along central Florida's Atlantic coast into 10-ha grid cells, which approximated average territory size of the threatened Florida Scrub-Jay (Aphelocoma coerulescens), a management indicator species. We used l.0-m resolution aerial imagery for 1994, 1999, and 2004 to classify grid cells into four habitat quality states that were directly related to Florida Scrub-Jay source-sink dynamics and management decision making. Results showed that static site features related to fire propagation (vegetation type, edges) and temporally varying disturbances (fires, mechanical cutting) best explained transition probabilities. Results indicated that much of the scrub and flatwoods ecosystem was resistant to moving from a degraded state to a desired state without mechanical cutting, an expensive restoration tool. We used habitat models parameterized with the estimated transition probabilities to investigate the consequences of alternative management scenarios on future habitat dynamics. We recommend this multistate modeling approach as being broadly applicable for studying ecosystem, land cover, or habitat dynamics. The approach provides maximum-likelihood estimates of transition parameters, including precision measures, .and can be used to assess evidence among competing ecological models that describe system dynamics. [ABSTRACT FROM AUTHOR]

Quantifying habitat-specific survival and changes in habitat quality within disturbance-prone habitats is critical for understanding population dynamics and variation in fitness, and for managing degraded ecosystems. We used 18 years of color-banding data and multistate capture-recapture models to test whether habitat quality within territories influences survival and detection probability of breeding Florida Scrub-Jays (Apheloconia coerulescens) and to estimate bird transition probabilities from one territory quality state to another. Our study sites were along central Florida's Atlantic coast and included two of the four largest metapopulations within the species range. We developed Markov models for habitat transitions and compared these to bird transition probabilities. Florida Scrub-Jay detection probabilities ranged from 0.88 in the tall territory state to 0.99 in the optimal state; detection probabilities were intermediate in the short state. Transition probabilities were similar for birds and habitat in grid cells mapped independently of birds. Thus, bird transitions resulted primarily from habitat transitions between states over time and not from bird movement. Survival ranged from 0.71 in the short state to 0.82 in the optimal state, with tall states being intermediate. We conclude that average Florida Scrub-Jay survival will remain at levels that lead to continued population declines because most current habitat quality is only marginally suitable across most of the species range. Improvements in habitat are likely to be slow and difficult because tall states are resistant to change and the optimal state represents an intermediate transitional stage. The multistate modeling approach to quantifying survival and habitat transition probabilities is useful for quantifying habitat transition probabilities and comparing them to bird transition probabilities to test for habitat selection in dynamic environments. [ABSTRACT FROM AUTHOR]

The article discusses a study which examines the source-sink dynamics and territory quality transitions of the bird specie Florida Scrub-Jays. It investigates the reproductive success, survival, immigration, pair bond fidelity and the duration of delayed breeding by young Florida Scrub-Jay to enhance habitat restoration. It suggests to improve habitat quality at the territorial scale to attain successful habitat restoration.