19 results on '"R Shaikh"'
Search Results
2. RDX Based Enhanced Energy Propellant for Tank Gun Ammunition
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Sunil D. Shelar, Vijayalakshmi Ramavath, Garima Jaiswal, Munis A. R. Shaikh, and Subhankar Roy
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Propellant ,Ammunition ,Materials science ,General Chemical Engineering ,Nuclear engineering ,General Chemistry ,Energy (signal processing) ,Chamber pressure - Published
- 2019
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3. Studies of Viscosity Coefficient and Density Properties of Imidazolium Based Ionic Liquids in Aqueous Solutions at Different Temperatures
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Amulrao U. Borse, Kesharsingh J. Patil, Gaurav R. Gupta, P.P. Patil, Vasim R. Shaikh, and Pankaj D. Patil
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Aqueous solution ,Materials science ,010304 chemical physics ,Jones Dole equation ,Thermodynamics ,General Chemistry ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,chemistry.chemical_compound ,Viscosity coefficient ,chemistry ,0103 physical sciences ,Ionic liquid - Published
- 2018
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4. Structural Insights into the Hydrogen-Bonding and Folding Pattern in Ant-Ant-Pro-Gly Tetrapeptides
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Rajesh G. Gonnade, Sachin B. Baravkar, Samir R. Shaikh, Gangadhar J. Sanjayan, and Amol S. Kotmale
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010405 organic chemistry ,Stereochemistry ,Hydrogen bond ,Organic Chemistry ,010402 general chemistry ,01 natural sciences ,ANT ,0104 chemical sciences ,Folding (chemistry) ,chemistry.chemical_compound ,Molecular dynamics ,chemistry ,Amide ,Glycine ,Anthranilic acid ,Proline ,Physical and Theoretical Chemistry - Abstract
In this paper, we provide structural insights into the hydrogen-bonding and folding pattern in Ant-Ant-Pro-Gly tetrapeptides (Ant: anthranilic acid; Pro: proline; and Gly: glycine). Comparison of the C-terminal esters and their amide analogs revealed strikingly different H-bonding networks. Whereas the ester analogs displayed an open structure without terminal H-bonding interactions, the amide analogs showed a completely folded structure. Structural details were revealed by using a combination of X-ray crystal structure studies and NOE-based molecular dynamics (MD) simulation studies.
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- 2017
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5. Novel co-enrichment method for isolation of magnetotactic bacteria
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Ajay M. Sorty and Nasir R. Shaikh
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Fastidious organism ,Iron uptake ,education.field_of_study ,Magnetotactic bacteria ,Magnetosome ,Population ,General Medicine ,Biology ,Isolation (microbiology) ,Applied Microbiology and Biotechnology ,Microbiology ,Environmental chemistry ,Soil water ,Magnetotaxis ,education - Abstract
A novel co-enrichment technique was designed for enrichment of magnetotactic bacteria from soil, water, and sediments. Delayed addition of iron uptake inducer and the iron source proved amenable to induce magnetosome synthesis by MTB followed by their separation from consortium using magnetic flux. We successfully enriched and isolated both North seeking as well as South seeking magnetotactic bacteria from Lonar Lake (Buldhana), Moti Lake (Jalna), Ghanewadi Lake (Jalna), Ganesh Lake (Miraj), Rankala Lake (Kolhapur), and industrial metal-contaminated glaying soils (Jalna) and a soil (Karad), (MS, India) exposed to high-voltage electric current. The hanging drop preparations and growth under magnetic stress on low-agar media allowed conformation of magnetotactic behavior of the isolates. Both Gram positive and Gram negative MTB were isolated with diverse morphologies. South seeking population was more predominant. The soil inhabitants showed little dwelling property which was more prominent in case of aquatic inhabitants. The use of in situ pH and salt concentrations during enrichment and isolation found suited. The simultaneous growth of whole consortium in the system ensured the in situ simulation of microenvironment needful for proper growth of fastidious MTB.
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- 2014
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6. Kinetics of Condensation Reactions between Ethanolamine (Amino-Alcohol) and Dicarboxylic Acids at 413 K
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U. R. Kapadi, Shamkant L. Patil, Dilip G. Hundiwale, and Vasim R. Shaikh
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Inorganic Chemistry ,chemistry.chemical_compound ,Ethanolamine ,chemistry ,Organic Chemistry ,Kinetics ,Organic chemistry ,Alcohol ,Physical and Theoretical Chemistry ,Condensation reaction ,Biochemistry - Published
- 2013
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7. Structural insights into initial and intermediate steps of the ribosome-recycling process
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Nobuhiro Iwakura, Hideko Kaji, Tanvir R. Shaikh, Rajendra K. Agrawal, Akira Kaji, and Takeshi Yokoyama
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General Immunology and Microbiology ,General Neuroscience ,Translation (biology) ,Biology ,Ribosome ,General Biochemistry, Genetics and Molecular Biology ,Elongation factor ,Biochemistry ,Ribosomal protein ,23S ribosomal RNA ,Transfer RNA ,Biophysics ,30S ,Molecular Biology ,50S - Abstract
The ribosome-recycling factor (RRF) and elongation factor-G (EF-G) disassemble the 70S post-termination complex (PoTC) into mRNA, tRNA, and two ribosomal subunits. We have determined cryo-electron microscopic structures of the PoTC·RRF complex, with and without EF-G. We find that domain II of RRF initially interacts with universally conserved residues of the 23S rRNA helices 43 and 95, and protein L11 within the 50S ribosomal subunit. Upon EF-G binding, both RRF and tRNA are driven towards the tRNA-exit (E) site, with a large rotational movement of domain II of RRF towards the 30S ribosomal subunit. During this intermediate step of the recycling process, domain II of RRF and domain IV of EF-G adopt hitherto unknown conformations. Furthermore, binding of EF-G to the PoTC·RRF complex reverts the ribosome from ratcheted to unratcheted state. These results suggest that (i) the ribosomal intersubunit reorganizations upon RRF binding and subsequent EF-G binding could be instrumental in destabilizing the PoTC and (ii) the modes of action of EF-G during tRNA translocation and ribosome-recycling steps are markedly different.
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- 2012
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8. Experience with Optivate®, a new high purity concentrate of factor VIII with von Willebrand factor, in patients undergoing surgery
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R. Shaikh-Zaidi, Trevor Baglin, D. O’Shaunessey, Anna Dmoszynska, Charles R. M. Hay, Andrzej Hellmann, Michael Makris, and Clive H. Dash
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medicine.medical_specialty ,biology ,medicine.diagnostic_test ,business.industry ,Haemophilia A ,Hematology ,General Medicine ,Haemophilia ,medicine.disease ,Preoperative care ,Surgery ,Von Willebrand factor ,Liver biopsy ,Antifibrinolytic agent ,Perioperative care ,medicine ,biology.protein ,In patient ,business ,Genetics (clinical) - Abstract
The efficacy and safety of Optivate(®) was assessed in 23 surgical operations, orthopaedic (12) including 5 revision arthroplasties, ophthalmic (1), ENT (1), dental (6), liver biopsy (2), and removal of portacath (1) on 15 teenagers and adults with severe haemophilia A. The preoperative dose was calculated to raise the FVIII concentration to 100 IU dL(-1). Subsequent doses were targeted to maintain at least 50 IU dL(-1). There were 11 major and 12 minor operations categorized as receiving intensive replacement therapy for ≥ 5 days or < 5 days respectively. The median preoperative dose was 50.4 (range 18.2-88.2) IU kg(-1). The median incremental recovery based on this first dose in 10 procedures (5 patients) was 2.9 (range 2.4-3.4 IU dL(-1) ) per IU kg(-1). The daily doses decreased during the first 4 days of the study. The patients in this study received 173 infusions in total. Outcome was 'good' or 'excellent' for 19 (83%) of 23 operations, 'uncertain' in three procedures because an antifibrinolytic agent was used as well and for one procedure outcome was not assessed. Tolerance was good. There were no excessive bleeds, no inhibitors and no virus transmissions.
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- 2011
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9. Pharmacokinetics of Optivate®, a high-purity concentrate of factor VIII with von Willebrand factor, in patients with severe haemophilia A
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Trevor Baglin, Jacek Treliński, Michael Makris, Clive H. Dash, Janusz Kloczko, Andrzej Hellmann, Krystyna Zawilska, Kazimierz Kuliczkowski, E. Gascoigne, Anna Dmoszynska, D. O’Shaugnessy, Charles R. M. Hay, and R. Shaikh-Zaidi
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Volume of distribution ,medicine.medical_specialty ,biology ,business.industry ,Haemophilia A ,Hematology ,General Medicine ,Haemophilia ,medicine.disease ,Gastroenterology ,Surgery ,Von Willebrand factor ,Pharmacokinetics ,Internal medicine ,Dry heating ,medicine ,biology.protein ,Severe haemophilia A ,In patient ,business ,Genetics (clinical) - Abstract
Optivate(®) is a high purity factor VIII/von Willebrand factor (FVIII/VWF) concentrate, which is manufactured using two antiviral processes: solvent/detergent and terminal dry heating (80 °C for 72 h). A multicentre, non-randomized open-label study in 15 patients was conducted to test the pharmacokinetics (PK) of Optivate(®). PK variables were analysed for the patients' prior FVIII product (PK1), their first dose of Optivate(®) (PK2) and at 3 months therapy (PK3). Mean non-compartmental half-lives (h) were 14.1, 12.4 and 12.1, respectively (P = 0.45), mean clearances (mL h(-1) kg(-1)) were 3.6, 3.2 and 3.1, respectively (P = 0.051), MRTs (h) were 19.0, 17.3 and 17.4, respectively (P = 0.39) and mean AUC(0-48h) (h IU mL(-1)) were 14.3, 15.4 and 16.6, respectively (P = 0.051) and mean AUC(0-∞) (h IU mL(-1)) were 15.9, 16.4 and 17.9, respectively (P = 0.18). The recovery data from this PK study was aggregated with recovery data collected from another study, with similar design but devoid of the other PK measurements. A total of 309 recoveries were conducted in 70 patients. The overall mean recovery per subject across 27 Optivate(®) batches was 2.7 IU dL(-1) per IU kg(-1). There were no clinical differences between Optivate(®) and other FVIII products, and except for volume of distribution (Vd), no statistically significant differences were seen with respect to any of the other PK variables, or in recovery between weeks 0 and 12. Therefore, the PK of FVIII is not affected by the processes used to manufacture Optivate(®), which can be expected to be effective in the management of patients with haemophilia A.
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- 2010
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10. Superparamagnetic Iron Oxide Nanoparticle-Aptamer Bioconjugates for Combined Prostate Cancer Imaging and Therapy
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Robert Langer, Michael J. Cima, Philip W. Kantoff, Vaishali Bagalkot, Sangyong Jon, Mariam R Shaikh, Liangfang Zhang, Kai P. Yuet, Frank Alexis, Omid C. Farokhzad, Frank X. Gu, Neil H. Bander, Andrew Z. Wang, and Christophoros C. Vasilliou
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Male ,Cell Survival ,Aptamer ,Nanoparticle ,Antineoplastic Agents ,Nanotechnology ,urologic and male genital diseases ,Biochemistry ,Article ,Magnetics ,Structure-Activity Relationship ,Prostate cancer ,Drug Delivery Systems ,In vivo ,Cell Line, Tumor ,Drug Discovery ,medicine ,Humans ,Doxorubicin ,General Pharmacology, Toxicology and Pharmaceutics ,Cell Proliferation ,Pharmacology ,Chemistry ,Organic Chemistry ,Prostatic Neoplasms ,Aptamers, Nucleotide ,medicine.disease ,Ferrosoferric Oxide ,Cell culture ,Drug Design ,Drug delivery ,Cancer research ,Nanoparticles ,Molecular Medicine ,Magnetic nanoparticles ,Drug Screening Assays, Antitumor ,medicine.drug - Abstract
ThemajorshortcomingofCombidexisitsinabilitytodetectPCadiseaseoutsideofthelymphnodes.Herein, we report the development of a novel, multifunc-tional, thermally cross-linked SPION (TCL-SPION) that can bothdetect PCa cells, and deliver targeted chemotherapeuticagents directly to the PCa cells. We previously reported theuseoftheA10RNAaptamer (Apt), which bindstheextracellu-lar domain of the prostate-specific membrane antigen (PSMA),to engineer targeted nanoparticles for PCa therapy and imag-ing.
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- 2008
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11. DNMT3A-2 EXPRESSION LEVELS CHARACTERISE DIFFUSE LARGE B-CELL LYMPHOMA WITH DISTINCT METHYLATION PATTERNS AND OUTCOME
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C. Burton, Martin Kaiser, Andrea Kuhnl, Mary Gleeson, Laura Clifton-Hadley, Nicholas Counsell, R. Shaikh, M. Bentley, D. C. Linch, Oliver Schofield, David Cunningham, Anthony Lawrie, Paul Smith, Sharon Barrans, Mike Hubank, L. Ulrich, and L. Edwards
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Cancer Research ,Oncology ,medicine ,Cancer research ,Hematology ,General Medicine ,Methylation ,Biology ,medicine.disease ,Diffuse large B-cell lymphoma - Published
- 2017
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12. Clinical experience with Optivate®, high-purity factor VIII (FVIII) product with von Willebrand factor (VWF) in young children with haemophilia A
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K. Gillanders, Clive H. Dash, Michał Matysiak, H. Bobrowska, Walentyna Balwierz, Jerzy Kowalczyk, R. Shaikh-Zaidi, and Alicja Chybicka
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Pediatrics ,medicine.medical_specialty ,biology ,business.industry ,Haemophilia A ,Vital signs ,High purity factor VIII ,Hematology ,General Medicine ,Haemophilia ,medicine.disease ,Tolerability ,Von Willebrand factor ,On demand ,medicine ,biology.protein ,business ,Prospective cohort study ,Genetics (clinical) - Abstract
Summary. Optivate® is a high-purity FVIII/VWF product. Its safety, tolerability and efficacy in subjects ≥12 years have been demonstrated. This study was undertaken to assess Optivate® in children with haemophilia A. Twenty-five children, including one PUP (previously untreated patient), aged 1–6 years (mean 4.67 years) were treated with Optivate® for 26 weeks. Inhibitors were assessed every 3 months and viral status at the study start and end. Prophylaxis was used by five boys and on demand by twenty. The mean number of bleeds in the study was lower compared to the same period pre-study (12.0/child vs. 16.2/child), with fewer bleeds (P
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- 2011
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13. ChemInform Abstract: Synthesis, Characterization and in vitro Antimicrobial Studies of New 2,3-Disubstituted Quinazolin-4(3H)-ones of 2-[2-(2,6-Dichlorophenyl)amino]phenyl Acetic Acid
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Navin B. Patel and Asif R. Shaikh
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Chemistry ,Phenyl acetic acid ,Ampicillin ,medicine ,Organic chemistry ,General Medicine ,Antibacterial activity ,Antimicrobial ,In vitro ,medicine.drug - Abstract
Most of the synthesized compounds (VII) (15 examples) show comparable antibacterial activity like ampicillin and strong activity against C.
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- 2010
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14. P16.05: 12 week abdominal ectopic pregnancy
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N. Sathasivam, R. Shaikh, M. Pineda, and C. Rizvi
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medicine.medical_specialty ,Reproductive Medicine ,Radiological and Ultrasound Technology ,Ectopic pregnancy ,business.industry ,Obstetrics ,Obstetrics and Gynecology ,Medicine ,Radiology, Nuclear Medicine and imaging ,General Medicine ,business ,medicine.disease - Published
- 2013
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15. Proline-Catalyzed Asymmetric Formal α-Alkylation of Aldehydes via Vinylogous Iminium Ion Intermediates Generated from Arylsulfonyl Indoles
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Giuseppe Bartoli, Paolo Melchiorre, Andrea Mazzanti, Rafik Rajjak Shaikh, Marino Petrini, R. R. Shaikh, A. Mazzanti, M. Petrini, G. Bartoli, and P. Melchiorre
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Ions ,Models, Molecular ,chemistry.chemical_classification ,Indole test ,ORGANOCATALYSIS ,Molecular Structure ,Iminium ,Stereoisomerism ,General Chemistry ,General Medicine ,ALKYLATION ,Alkylation ,Crystallography, X-Ray ,Aldehyde ,Catalysis ,Ion ,chemistry ,Organocatalysis ,PROLINE ,INDOLES ,Organic chemistry ,Imines ,Proline ,ALDEHYDES - Abstract
we have discovered a novel strategy for the enamine-catalyzed formal alfa-alkylation of aldehydes. The use of L-proline allows easy access to relevant 3-indolyl derivatives with high diastereo- and enantiocontrol, affording an easy alternative to the classical Friedel–Crafts route to these compounds
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- 2008
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16. Two-hour Observation After Liver Biopsy in Children: Clinical and Economic Outcome of a Quality Improvement Intervention.
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Alomari MH, Kerr CL, Chewning R, Chaudry G, Shaikh R, Padua H, Landrigan-Ossar M, and Alomari AI
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- Biopsy, Needle, Child, Female, Humans, Liver diagnostic imaging, Male, Retrospective Studies, Ultrasonography, Image-Guided Biopsy, Quality Improvement
- Abstract
Objective: Following percutaneous liver biopsy performed at our institution on an outpatient basis, children traditionally were observed for 4 hours then discharged after verifying a stable hematocrit level. In June 2015, we adopted a quality improvement project with shorter 2-hour observation for patients with no known risks and the hematocrit test was abandoned.The purpose of this study is to evaluate the clinical and economic outcomes of early discharge of children following liver biopsy., Methods: We analyzed data on 2 groups of children who underwent ultrasound-guided nontargeted core needle liver biopsy performed on outpatient basis. Group A (100 procedures with 4-hour postprocedural observation time and hematocrit test) was compared with group B (100 procedures with 2-hour observation without hematocrit test)., Results: Group A consisted of 92 patients (43 boys; 49 girls) with a mean age of 11.1 years and mean weight of 52.6 kg. Group B had 92 patients (47 boys; 45 girls) with a mean age of 8.9 years and mean weight of 40.5 kg. The mean length of observation was 281 minutes (range 204-540 minutes) and 147 minutes (range 86-332 minutes) for groups A and B, respectively. The mean recovery charges were reduced by 35% per procedure in group B. The tissue obtained was sufficient for pathologic diagnosis in all procedures. There were no biopsy-related complications in either group., Conclusions: Enhanced recovery with early discharge of low-risk children after 2-hour observation following percutaneous liver biopsy can be safely implemented without adversely affecting the outcome. Shorter postbiopsy observation can be cost-saving and may potentially improve patient satisfaction.
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- 2020
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17. Dual contrast in computed tomography allows earlier characterization of articular cartilage over single contrast.
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Bhattarai A, Pouran B, Mäkelä JTA, Shaikh R, Honkanen MKM, Prakash M, Kröger H, Grinstaff MW, Weinans H, Jurvelin JS, and Töyräs J
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- Aged, Gadolinium, Humans, Phthalic Acids chemistry, Phthalic Acids metabolism, Cartilage, Articular diagnostic imaging, Contrast Media, Heterocyclic Compounds, Organometallic Compounds, Tomography, X-Ray Computed methods
- Abstract
Cationic computed tomography contrast agents are more sensitive for detecting cartilage degeneration than anionic or non-ionic agents. However, osteoarthritis-related loss of proteoglycans and increase in water content contrarily affect the diffusion of cationic contrast agents, limiting their sensitivity. The quantitative dual-energy computed tomography technique allows the simultaneous determination of the partitions of iodine-based cationic (CA4+) and gadolinium-based non-ionic (gadoteridol) agents in cartilage at diffusion equilibrium. Normalizing the cationic agent partition at diffusion equilibrium with that of the non-ionic agent improves diagnostic sensitivity. We hypothesize that this sensitivity improvement is also prominent during early diffusion time points and that the technique is applicable during contrast agent diffusion. To investigate the validity of this hypothesis, osteochondral plugs (d = 8 mm, N = 33), extracted from human cadaver (n = 4) knee joints, were immersed in a contrast agent bath (a mixture of CA4+ and gadoteridol) and imaged using the technique at multiple time points until diffusion equilibrium. Biomechanical testing and histological analysis were conducted for reference. Quantitative dual-energy computed tomography technique enabled earlier determination of cartilage proteoglycan content over single contrast. The correlation coefficient between human articular cartilage proteoglycan content and CA4+ partition increased with the contrast agent diffusion time. Gadoteridol normalized CA4+ partition correlated significantly (P < .05) with Mankin score at all time points and with proteoglycan content after 4 hours. The technique is applicable during diffusion, and normalization with gadoteridol partition improves the sensitivity of the CA4+ contrast agent., (© 2020 The Authors. Journal of Orthopaedic Research ® published by Wiley Periodicals LLC on behalf of Orthopaedic Research Society.)
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- 2020
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18. Synchrotron MicroCT Reveals the Potential of the Dual Contrast Technique for Quantitative Assessment of Human Articular Cartilage Composition.
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Honkanen MKM, Saukko AEA, Turunen MJ, Shaikh R, Prakash M, Lovric G, Joukainen A, Kröger H, Grinstaff MW, and Töyräs J
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- Aged, Biomechanical Phenomena, Cadaver, Contrast Media chemistry, Gadolinium chemistry, Heterocyclic Compounds chemistry, Humans, Image Processing, Computer-Assisted, Organometallic Compounds chemistry, X-Rays, Cartilage, Articular diagnostic imaging, Cartilage, Articular pathology, Osteoarthritis diagnostic imaging, Synchrotrons, X-Ray Microtomography methods
- Abstract
Dual contrast micro computed tomography (CT) shows potential for detecting articular cartilage degeneration. However, the performance of conventional CT systems is limited by beam hardening, low image resolution (full-body CT), and long acquisition times (conventional microCT). Therefore, to reveal the full potential of the dual contrast technique for imaging cartilage composition we employ the technique using synchrotron microCT. We hypothesize that the above-mentioned limitations are overcome with synchrotron microCT utilizing monochromatic X-ray beam and fast image acquisition. Human osteochondral samples (n = 41, four cadavers) were immersed in a contrast agent solution containing two agents (cationic CA4+ and non-ionic gadoteridol) and imaged with synchrotron microCT at an early diffusion time point (2 h) and at diffusion equilibrium (72 h) using two monochromatic X-ray energies (32 and 34 keV). The dual contrast technique enabled simultaneous determination of CA4+ (i.e., proteoglycan content) and gadoteridol (i.e., water content) partitions within cartilage. Cartilage proteoglycan content and biomechanical properties correlated significantly (0.327 < r < 0.736, p < 0.05) with CA4+ partition in superficial and middle zones at both diffusion time points. Normalization of the CA4+ partition with gadoteridol partition within the cartilage significantly (p < 0.05) improved the detection sensitivity for human osteoarthritic cartilage proteoglycan content, biomechanical properties, and overall condition (Mankin, Osteoarthritis Research Society International, and International Cartilage Repair Society grading systems). The dual energy technique combined with the dual contrast agent enables assessment of human articular cartilage proteoglycan content and biomechanical properties based on CA4+ partition determined using synchrotron microCT. Additionally, the dual contrast technique is not limited by the beam hardening artifact of conventional CT systems. © 2019 The Authors. Journal of Orthopaedic Research® published by Wiley Periodicals, Inc. on behalf of Orthopaedic Research Society. J Orthop Res 38:563-573, 2020., (© 2019 The Authors. Journal of Orthopaedic Research® published by Wiley Periodicals, Inc. on behalf of Orthopaedic Research Society.)
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- 2020
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19. Blood biomarkers for the non-invasive diagnosis of endometriosis.
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Nisenblat V, Bossuyt PM, Shaikh R, Farquhar C, Jordan V, Scheffers CS, Mol BW, Johnson N, and Hull ML
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- Adult, Autoantibodies blood, CA-125 Antigen blood, CA-19-9 Antigen blood, Endometrium immunology, Female, Humans, Interleukin-6 blood, Pelvis, Randomized Controlled Trials as Topic, Biomarkers blood, Endometriosis diagnosis, Ovarian Diseases diagnosis, Peritoneal Diseases diagnosis
- Abstract
Background: About 10% of reproductive-aged women suffer from endometriosis, a costly chronic disease causing pelvic pain and subfertility. Laparoscopy is the gold standard diagnostic test for endometriosis, but is expensive and carries surgical risks. Currently, there are no non-invasive or minimally invasive tests available in clinical practice to accurately diagnose endometriosis. Although other reviews have assessed the ability of blood tests to diagnose endometriosis, this is the first review to use Cochrane methods, providing an update on the rapidly expanding literature in this field., Objectives: To evaluate blood biomarkers as replacement tests for diagnostic surgery and as triage tests to inform decisions on surgery for endometriosis. Specific objectives include:1. To provide summary estimates of the diagnostic accuracy of blood biomarkers for the diagnosis of peritoneal, ovarian and deep infiltrating pelvic endometriosis, compared to surgical diagnosis as a reference standard.2. To assess the diagnostic utility of biomarkers that could differentiate ovarian endometrioma from other ovarian masses., Search Methods: We did not restrict the searches to particular study designs, language or publication dates. We searched CENTRAL to July 2015, MEDLINE and EMBASE to May 2015, as well as these databases to 20 April 2015: CINAHL, PsycINFO, Web of Science, LILACS, OAIster, TRIP, ClinicalTrials.gov, DARE and PubMed., Selection Criteria: We considered published, peer-reviewed, randomised controlled or cross-sectional studies of any size, including prospectively collected samples from any population of reproductive-aged women suspected of having one or more of the following target conditions: ovarian, peritoneal or deep infiltrating endometriosis (DIE). We included studies comparing the diagnostic test accuracy of one or more blood biomarkers with the findings of surgical visualisation of endometriotic lesions., Data Collection and Analysis: Two authors independently collected and performed a quality assessment of data from each study. For each diagnostic test, we classified the data as positive or negative for the surgical detection of endometriosis, and we calculated sensitivity and specificity estimates. We used the bivariate model to obtain pooled estimates of sensitivity and specificity whenever sufficient datasets were available. The predetermined criteria for a clinically useful blood test to replace diagnostic surgery were a sensitivity of 0.94 and a specificity of 0.79 to detect endometriosis. We set the criteria for triage tests at a sensitivity of ≥ 0.95 and a specificity of ≥ 0.50, which 'rules out' the diagnosis with high accuracy if there is a negative test result (SnOUT test), or a sensitivity of ≥ 0.50 and a specificity of ≥ 0.95, which 'rules in' the diagnosis with high accuracy if there is a positive result (SpIN test)., Main Results: We included 141 studies that involved 15,141 participants and evaluated 122 blood biomarkers. All the studies were of poor methodological quality. Studies evaluated the blood biomarkers either in a specific phase of the menstrual cycle or irrespective of the cycle phase, and they tested for them in serum, plasma or whole blood. Included women were a selected population with a high frequency of endometriosis (10% to 85%), in which surgery was indicated for endometriosis, infertility work-up or ovarian mass. Seventy studies evaluated the diagnostic performance of 47 blood biomarkers for endometriosis (44 single-marker tests and 30 combined tests of two to six blood biomarkers). These were angiogenesis/growth factors, apoptosis markers, cell adhesion molecules, high-throughput markers, hormonal markers, immune system/inflammatory markers, oxidative stress markers, microRNAs, tumour markers and other proteins. Most of these biomarkers were assessed in small individual studies, often using different cut-off thresholds, and we could only perform meta-analyses on the data sets for anti-endometrial antibodies, interleukin-6 (IL-6), cancer antigen-19.9 (CA-19.9) and CA-125. Diagnostic estimates varied significantly between studies for each of these biomarkers, and CA-125 was the only marker with sufficient data to reliably assess sources of heterogeneity.The mean sensitivities and specificities of anti-endometrial antibodies (4 studies, 759 women) were 0.81 (95% confidence interval (CI) 0.76 to 0.87) and 0.75 (95% CI 0.46 to 1.00). For IL-6, with a cut-off value of > 1.90 to 2.00 pg/ml (3 studies, 309 women), sensitivity was 0.63 (95% CI 0.52 to 0.75) and specificity was 0.69 (95% CI 0.57 to 0.82). For CA-19.9, with a cut-off value of > 37.0 IU/ml (3 studies, 330 women), sensitivity was 0.36 (95% CI 0.26 to 0.45) and specificity was 0.87 (95% CI 0.75 to 0.99).Studies assessed CA-125 at different thresholds, demonstrating the following mean sensitivities and specificities: for cut-off > 10.0 to 14.7 U/ml: 0.70 (95% CI 0.63 to 0.77) and 0.64 (95% CI 0.47 to 0.82); for cut-off > 16.0 to 17.6 U/ml: 0.56 (95% CI 0.24, 0.88) and 0.91 (95% CI 0.75, 1.00); for cut-off > 20.0 U/ml: 0.67 (95% CI 0.50 to 0.85) and 0.69 (95% CI 0.58 to 0.80); for cut-off > 25.0 to 26.0 U/ml: 0.73 (95% CI 0.67 to 0.79) and 0.70 (95% CI 0.63 to 0.77); for cut-off > 30.0 to 33.0 U/ml: 0.62 (95% CI 0.45 to 0.79) and 0.76 (95% CI 0.53 to 1.00); and for cut-off > 35.0 to 36.0 U/ml: 0.40 (95% CI 0.32 to 0.49) and 0.91 (95% CI 0.88 to 0.94).We could not statistically evaluate other biomarkers meaningfully, including biomarkers that were assessed for their ability to differentiate endometrioma from other benign ovarian cysts.Eighty-two studies evaluated 97 biomarkers that did not differentiate women with endometriosis from disease-free controls. Of these, 22 biomarkers demonstrated conflicting results, with some studies showing differential expression and others no evidence of a difference between the endometriosis and control groups., Authors' Conclusions: Of the biomarkers that were subjected to meta-analysis, none consistently met the criteria for a replacement or triage diagnostic test. A subset of blood biomarkers could prove useful either for detecting pelvic endometriosis or for differentiating ovarian endometrioma from other benign ovarian masses, but there was insufficient evidence to draw meaningful conclusions. Overall, none of the biomarkers displayed enough accuracy to be used clinically outside a research setting. We also identified blood biomarkers that demonstrated no diagnostic value in endometriosis and recommend focusing research resources on evaluating other more clinically useful biomarkers.
- Published
- 2016
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