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The expression changes of CD2-associated protein (CD2AP) can lead to kidney diseases with proteinuria, including nephrotic syndrome (NS). A recent study reported that miRNAs may be important transcriptional regulators. In this study, we found increased expression of miR-939-5p and decreased expression of CD2AP in the peripheral blood of patients with NS. However, miR-939-5p did not show a regulatory effect on the 3'-untranslated region of CD2AP. The expression levels of specific protein 1 and adenovirus E2 promoter-binding factor 1, important transcription regulators in the promoter region of CD2AP, were also not affected by microRNA (miR)-939-5p. We confirmed that miR-939-5p is in the nucleus by fluorescent in situ hybridization and cytoplasmic separation polymerase chain reaction. The promoter plasmid and miR-939-5p were cotransfected into HEK-293 cells, and the luciferase reporter gene assay was used to analyze the promoter activity. We found that miR-939-5p binds to a specific sequence in the CD2AP promoter. miR-939-5p was confirmed to reduce the recruitment of RNA polymerase II to the CD2AP promoter region by chromatin immunoprecipitation. These findings improve our understanding of the mechanism of miR-939-5p in NS and provide potential molecular therapeutic targets for NS.

The study on nucleic acid retention in ion-pair reversed-phase high-performance liquid chromatography mainly focuses on size-dependence, however, other factors influencing retention behaviors have not been comprehensively clarified up to date. In this present work, the retention behaviors of oligonucleotides and double-stranded DNAs were investigated on silica-based C18 stationary phase by ion-pair reversed-phase high-performance liquid chromatography. It is found that the retention of oligonucleotides was influenced by base composition and base sequence as well as size, and oligonucleotides prone to self-dimerization have weaker retention than those not prone to self-dimerization but with the same base composition. However, homo-oligonucleotides are suitable for the size-dependent separation as a special case of oligonucleotides. For double-stranded DNAs, the retention is also influenced by base composition and base sequence, as well as size. This may be attributed to the interaction of exposed bases in major or minor grooves with the hydrophobic alky chains of stationary phase. In addition, no specific influence of guanine and cytosine content was confirmed on retention of double-stranded DNAs. Notably, the space effect resulted from the stereostructure of nucleic acids also influences the retention behavior in ion-pair reversed-phase high-performance liquid chromatography.

Polydopamine-coated Fe3 O4 magnetic nanoparticles synthesized through a facile solvothermal reaction and the self-polymerization of dopamine have been employed as a magnetic solid-phase extraction sorbent to enrich four phenolic compounds, bisphenol A, tetrabromobisphenol A, (S)-1,1'-bi-2-naphthol and 2,4,6-tribromophenol, from environmental waters followed by high-performance liquid chromatographic detection. Various parameters of the extraction were optimized, including the pH of the sample matrix, the amount of polydopamine-coated Fe3 O4 sorbent, the adsorption time, the enrichment factor of analytes, the elution solvent, and the reusability of the nanoparticles sorbent. The recoveries of these phenols in spiked water samples were 62.0-112.0% with relative standard deviations of 0.8-7.7%, indicating the good reliability of the magnetic solid-phase extraction with high-performance liquid chromatography method. In addition, the extraction characteristics of the magnetic polydopamine-coated Fe3 O4 nanoparticles were elucidated comprehensively. It is found that there are hydrophobic, π-π stacking and hydrogen bonding interactions between phenols and more dispersible polydopamine-coated Fe3 O4 in water, among which hydrophobic interaction dominates the magnetic solid-phase extraction performance.

Graphene-doped Fe3O4 nanocomposites were prepared by a solvothermal reaction of an iron source with graphene. The nanocomposites were characterized by transmission electron microscopy, atomic force microscopy, X-ray diffraction, superconducting quantum interference, Raman spectroscopy, Fourier transform infrared spectroscopy, and X-ray photoelectron spectroscopy. This nanomaterial has been used as a magnetic solid-phase extraction sorbent to extract trace brominated flame retardants from environmental waters. Various extraction parameters were optimized including dosage and reusability of the nanocomposites, and pH of sample matrix. The reliability of the magnetic solid-phase extraction protocol based on graphene-doped Fe3O4 nanocomposites was evaluated by investigating the recoveries of 2,4,6-tribromophenol, tetrabromobisphenol A, 4-bromodiphenyl ether, and 4,4'-dibromodiphenyl ether in water samples. Good recoveries (85.0-105.0%) were achieved with the relative standard deviation ranging from 1.1-7.1%. Moreover, it is speculated from characterization and magnetic solid-phase extraction experiment that there is not only π-π stacking but also possible hydrophobic interaction between the graphene-doped Fe3O4 nanocomposites and analytes.

A strategy to utilize neutral model compounds for lipophilicity measurement of ionizable basic compounds by reversed-phase high-performance liquid chromatography is proposed in this paper. The applicability of the novel protocol was justified by theoretical derivation. Meanwhile, the linear relationships between logarithm of apparent n-octanol/water partition coefficients (logKow '') and logarithm of retention factors corresponding to the 100% aqueous fraction of mobile phase (logkw ) were established for a basic training set, a neutral training set and a mixed training set of these two. As proved in theory, the good linearity and external validation results indicated that the logKow ''-logkw relationships obtained from a neutral model training set were always reliable regardless of mobile phase pH. Afterwards, the above relationships were adopted to determine the logKow of harmaline, a weakly dissociable alkaloid. As far as we know, this is the first report on experimental logKow data for harmaline (logKow = 2.28 ± 0.08). Introducing neutral compounds into a basic model training set or using neutral model compounds alone is recommended to measure the lipophilicity of weakly ionizable basic compounds especially those with high hydrophobicity for the advantages of more suitable model compound choices and convenient mobile phase pH control.

The levels and partitioning of genetic diversity and inbreeding depression were investigated in Tupistra pingbianensis, a narrow endemic of southeast Yunnan, China, characterized by a naturally fragmented distribution due to extreme specialization on a rare habitat type. Here genetic diversity and patterns of genetic variation within and among 11 populations were analyzed using amplified fragment length polymorphism markers with 97 individuals across its whole geographical range. High levels of genetic variation were revealed both at the species level (P(99) = 96.012%; H(t) = 0.302) and at the population level (P(99) = 51.41%; H(s) = 0.224). Strong genetic differentiation among populations was also detected (F(ST) = 0.2961; theta(II) = 0.281), which corresponded to results reported for typical animal-pollinated, mixed selfing, and outcrossing plant species. This result was consistent with mating patterns detected by our pollination experiments. The indirect estimate of gene flow based on theta(II) was low (N(m) = 0.64). Special habitat and its life history traits might play an important role in shaping the genetic diversity and the genetic structure of this species. A pollination experiment also failed to detect significant inbreeding depression upon F(l) fruit set, seed weight, and germinate rate fitness-traits. As a naturally rare species, T. pingbianensis is not seriously genetically impoverished and likely to have adapted to tolerating a high level of inbreeding early in its history, we propose this species need only periodic monitoring to ensure their continued persistence, but not intervention to remain viable.

Two semi-flexible 4,4′-bispyridyl ligands, N,N′-bis(4-pyridylethyl) pyromellitic diimide (4-pepmd) and N,N′-bis(4-pyridylmethyl)pyromellitic diimide (4-pmpmd), with different linker length, and their coordination polymers obtained by reaction with M(NO3)2 (M = Co or Cd) in mixed CHCl3 and ROH solvents are reported. 2D (6,3) brick-wall networks with Py3M nodes for the isostructural [Co(4-pepmd)1.5(NO3)2]n · nCHCl3 · 2nH2O · nEtOH (1) and [Cd(4-pepmd)1.5(NO3)2]n · nCHCl3 · nH2O · 2nMeOH (2), and 1D zigzag chain with Py2M nodes for [Co(4-pmpmd)(NO3)2]n · nCHCl3 (3) are observed. The ligand 4-pepmd with longer linker –(CH2)2– induces exclusively trispyridyl building blocks and 2D networks in its Co and Cd complexes, while the coordination preference of metal ions works more effectively for shorter linked 4-pmpmd to give either 1D (for Co, 3) or 2D [Cd(4-pmpmd)1.5(NO3)2]n · nCHCl3 (4) [10] polymer depending on the size of the metal ion.

Late transition metal (nickel, cobalt) complexes (1, 2) with β-ketoamine ligand (L) based on the pyrazolone derivative are synthesized by condensing 1-phenyl-3-methyl-4-benzoyl-5-pyrazolone with p-fluoroaniline, and then treating the β-ketoamine (L) produced with the respective metal halide. The bis(β-ketoamine)metal complexes can act as catalyst precursors for norbornene polymerization with activation by methylaluminoxane. The effects of the central metal variation in the complex on catalyst activities and polymer microstructure are described. Copyright © 2005 John Wiley & Sons, Ltd.