1. Spatiotemporal Patterns of Microbial Composition and Diversity in Precipitation
- Author
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Carolyn Weber, Cindy E. Morris, David G. Schmale, Aurora L. H. Bayless-Edwards, Kevin Failor, Ken Aho, Brent C. Christner, Boris A. Vinatzer, Rachel Joyce, Jason T. Werth, Idaho State University, University of Florida [Gainesville] (UF), School of Plant and Environmental Sciences, Virginia Polytechnic Institute and State University [Blacksburg], Unité de Pathologie Végétale (PV), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Division of Environmental Biology of the National Science Foundation (NSF DEB 1241069, NSF DEB 1241161/1643288), and Aho, K.
- Subjects
0106 biological sciences ,Metacommunity ,Assembly rules ,Operational taxonomic unit ,metacommunity ,cycle de l'eau ,Biodiversité et Ecologie ,[SDE.MCG]Environmental Sciences/Global Changes ,precipitation ,Biology ,microbial ecology ,01 natural sciences ,Biodiversity and Ecology ,bioaérosol ,03 medical and health sciences ,Microbial ecology ,diversité microbienne ,Precipitation ,meteorology ,Milieux et Changements globaux ,Ecology, Evolution, Behavior and Systematics ,biogeography ,030304 developmental biology ,community ecology ,bioprecipitation ,atmosphere ,metabarcoding ,0303 health sciences ,écologie microbienne ,communauté microbienne ,Community ,précipitation ,Ecology ,Species diversity ,General Medicine ,15. Life on land ,états-unis ,010601 ecology ,atmosphère ,13. Climate action ,Ice nucleus ,Biological dispersal ,Nestedness ,Species richness ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,010606 plant biology & botany - Abstract
International audience; Microbes in the atmosphere have broad ecological impacts, including the potential to trigger precipitation through species and strains that act as ice nucleation particles. To characterize spatiotemporal trends of microbial assemblages in precipitation we sequenced 16S (bacterial) and 18S (fungal) rRNA gene amplicon libraries collected from 72 precipitation events in three US states (Idaho, Louisiana, and Virginia) over four seasons. We considered these data from the perspective of a novel metacommunity framework. In agreement with our heuristic, we found evidence for distinct mechanisms underlying the composition and diversity of bacterial and fungal assemblages in precipitation. Specifically, we determined that: 1) bacterial operational taxonomic unit (OTU) composition of precipitation was strongly associated with macroscale drivers including season and high altitude characteristics of storms; 2) fungal OTU composition was strongly correlated with mesoscale drivers including particular spatial locations; 3) β‐diversity (heterogeneity of taxa among samples) for both bacteria and fungi was largely maintained by turnover of taxa; however, 4) bacterial assemblages had higher contributions to total β‐diversity from nestedness (i.e., lower richness assemblages were largely taxonomic subsets of richer assemblages), due to losses of taxa during dispersal, particularly among potential ice nucleation active bacteria; and 5) fungal assemblages had higher contributions to total β‐diversity from turnover due to OTU replacement. Spatiotemporal trends in precipitation‐borne metacommunities allowed delineation of a large number of statistically significant indicator taxa for particular sites and seasons, including trends for bacteria that are potentially ice nucleation active. Our findings advance understanding regarding the dispersion of aerosolized microbes via wet deposition, and the development of theory concerning potential assembly rules for bioaerosol assemblages.
- Published
- 2020