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Wheat stem rust, caused by Puccinia graminis f. sp. tritici, is a re-emerging disease, posing a threat to wheat production. In Spain, stem rust has been rarely detected since the 1970s, but infection was observed in wheat fields in 2018. We analysed six stem rust samples collected in Rota, Cádiz province and one from Monteagudo del Castillo, Teruel province. All the samples from Rota were typed as race TKTTF, whereas the sample from Monteagudo del Castillo, collected in a wheat field adjacent to barberry bushes, was typed as race TKHBK. This race has a unique and significant virulence combination that includes virulence to Sr31, Sr33, Sr53 and Sr59, and is avirulent to Rusty, a durum line developed for universal susceptibility to the wheat stem rust pathogen. TKHBK is the first race outside the Ug99 race group with virulence to Sr31 and the first known race with virulence to Sr59. Genotyping studies indicate that race TKHBK does not belong to the Ug99 or TKTTF race groups and constitutes a previously unknown lineage. Two hundred bread and durum wheat cultivars and breeding lines from Spain were evaluated against TKHBK, TKTTF, and six additional races. Resistance was observed to all the races evaluated. Molecular markers confirmed the presence of Sr7a, Sr24, Sr31, Sr38 and Sr57 in bread wheat, and Sr13 in durum wheat. The re-emergence of wheat stem rust in Spain and the occurrence of unique virulences underscore the need to continue surveying and monitoring this disease. info:eu-repo/semantics/acceptedVersion

Wheat stem (or black) rust, caused by Puccinia graminis f. sp. tritici (Pgt), has been historically among the most devastating global fungal diseases of wheat. The recent occurrence and spread of new virulent races such as Ug99 have prompted global efforts to identify and isolate more effective stem rust resistance (Sr) genes. Here, we report the map-based cloning of the Ug99-effective SrTm5 gene from diploid wheat Triticum monococcum accession PI 306540 that encodes a typical coiled-coil nucleotide-binding leucine-rich repeat protein. This gene, designated as Sr22b, is a new allele of Sr22 with a rare insertion of a large (13.8-kb) retrotransposon into its second intron. Biolistic transformation of an ~112-kb circular bacterial artificial chromosome plasmid carrying Sr22b into the susceptible wheat variety Fielder was sufficient to confer resistance to stem rust. In a survey of 168 wheat genotypes, Sr22b was present only in cultivated T. monococcum subsp. monococcum accessions but absent in all tested tetraploid and hexaploid wheat lines. We developed a diagnostic molecular marker for Sr22b and successfully introgressed a T. monococcum chromosome segment containing this gene into hexaploid wheat to accelerate its deployment and pyramiding with other Sr genes in wheat breeding programmes. Sr22b can be a valuable component of gene pyramids or transgenic cassettes combining different resistance genes to control this devastating disease.

SUMMARY The resistance gene Sr13 is one of the most important genes in durum wheat for controlling stem rust caused by Puccinia graminis f. sp. tritici (Pgt). The Sr13 functional gene CNL13 has haplotypes R1, R2 and R3. The R1/R3 and R2 haplotypes were originally designated as alleles Sr13a and Sr13b, respectively. To detect additional Sr13 alleles, we developed Kompetitive allele specific PCR (KASP™) marker KASPSr13 and four semi‐thermal asymmetric reverse PCR markers, rwgsnp37–rwgsnp40, based on the CNL13 sequence. These markers were shown to detect R1, R2 and R3 haplotypes in a panel of diverse tetraploid wheat accessions. We also observed the presence of Sr13 in durum line CAT‐A1, although it lacked any of the known haplotypes. Sequence analysis revealed that CNL13 of CAT‐A1 differed from the susceptible haplotype S1 by a single nucleotide (C2200T) in the leucine‐rich repeat region and differed from the other three R haplotypes by one or two additional nucleotides, confirming that CAT‐A1 carries a new (R4) haplotype. Stem rust tests on the monogenic, transgenic and mutant lines showed that R1 differed from R3 in its susceptibility to races TCMJC and THTSC, whereas R4 differed from all other haplotypes for susceptibility to TTKSK, TPPKC and TCCJC. Based on these differences, we designate the R1, R3 and R4 haplotypes as alleles Sr13a, Sr13c and Sr13d, respectively. This study indicates that Sr13d may be the primitive functional allele originating from the S1 haplotype via a point mutation, with the other three R alleles probably being derived from Sr13d through one or two additional point mutations., Significance Statement A new resistant haplotype (R4) of Sr13, designated as Sr13d, was identified in the genotype CAT‐A1, and based on sequencing studies this allele is hypothesized to be a primitive functional resistant allele of Sr13. We established from extensive rust tests that haplotypes R1 and R3 should be separated, and R3 was designated Sr13c and determined to be preferable to Sr13a for breeding, while Sr13d was undesirable for breeding due to susceptibility to stem rust Ug99.

The winter wheat (Triticum aestivum L.) line CI13227 has been characterized as having adult plant resistance to leaf rust caused by Puccinia triticina Eriks (Pt). Line CI13227 was crossed with the susceptible spring wheat 'Thatcher' (Tc) and a Tc*2/CI13227 F

Objectives To compare the clinical performance of a universal adhesive in class V non-carious cervical lesions (NCCLs) using two surface treatment protocols (self-etch [SfE] vs selective-enamel-etch [SelE]). Material and methods Thirty-three adults, each with ≥2 NCCLs, received one resin composite restoration utilizing a SfE universal adhesive and another utilizing the adhesive and SelE with 37% phosphoric acid. Restorations were evaluated for sensitivity, retention, marginal discoloration, marginal adaptation, and clinical acceptability through 24 months using Cochran-Mantel-Haenszel tests for stratified, ordered categorical outcomes. Results Sixty-six restorations (35 SfE, 31 SelE; 27 volunteers) were evaluated at 24 months. There were no significant differences between SfE and SelE for sensitivity, retention, marginal adaptation, or clinical acceptability. One SfE restoration was lost. Marginal adaptation was significantly worse at 24 months than baseline for SelE (P = 0.01), but not for SfE. Marginal discoloration was significantly worse for SfE (P = 0.02), but not for SelE. Sensitivity improved from baseline to 24 months for both groups (SelE P = 0.004, SfE P = 0.002). Conclusions Twenty-four-month data indicated significantly reduced sensitivity for both groups, worse marginal discoloration for SfE, and worse marginal adaptation for SelE. No changes in retention or clinical acceptability were observed in either group. All retained restorations were clinically acceptable at 24 months. Clinical significance Both self-etch and selective enamel etch techniques with a universal adhesive produced clinically acceptable results in resin composite restorations for NCCLs over 2 years.

Wheat (Triticum aestivum L.) rusts are a worldwide production problem. Plant breeders have used genetic resistance to combat these fungi. However, single-gene resistance is rapidly overcome as a result of frequent occurrence of new virulent fungal strains. Thus, a supply of new resistance sources is continually needed, and new resistance sources are limited within hexaploid wheat genetic stocks. Wild relatives are able to be a resource for new resistance genes but are hindered because of chromosome incapability with domesticated wheats. Twenty-eight double-haploid hexaploid wheat/Amblyopyrum muticum (Boiss.) Eig introgression lines, with introgressions covering the majority of the T genome, were evaluated for resistance to Puccinia triticina Erikss., P. graminis Pers.:Pers. f.sp. tritici Erikss. & E. Henning, and P. striiformis Westend. f.sp. tritici Erikss.. At the seedling level, four lines were resistant to races of P. triticina, six lines were resistant to P. graminis, and 15 lines were resistant to P. striiformis. At the adult stage, 16 lines were resistant to P. triticina. Line 355 had resistance to all three rusts and line 161 had resistance to all tested races of P. triticina. Some of these lines will require further work to reduce the size of the introgressed segment; however, lines 92 and 355 have very small fragments and can be used directly as new resistance donors.

Wheat stem rust, caused by Puccinia graminis Pers. f. sp. tritici (Pgt), is a devastating fungal disease threatening global wheat production. The present paper reports the identification of stem rust resistance gene Sr60, a race-specific gene from diploid wheat Triticum monococcum L. that encodes a protein with two putative kinase domains. This gene, designated as WHEAT TANDEM KINASE 2 (WTK2), confers intermediate levels of resistance to Pgt. WTK2 was identified by map-based cloning and validated by transformation of a c.10-kb genomic sequence including WTK2 into susceptible common wheat variety Fielder (Triticum aestivum L.). Transformation of Fielder with WTK2 was sufficient to confer Pgt resistance. Sr60 transcripts were transiently upregulated 1 d post-inoculation with Pgt, but not in mock-inoculated plants. The upregulation of Sr60 was associated with stable upregulation of several pathogenesis-related genes. The Sr60-resistant haplotype found in T. monococcum was not found in polyploid wheat, suggesting an opportunity to introduce a novel resistance gene. Sr60 was successfully introgressed into hexaploid wheat, and we developed a diagnostic molecular marker to accelerate its deployment and pyramiding with other resistance genes. The cloned Sr60 also can be a useful component of transgenic cassettes including other resistance genes with complementary resistance profiles.

Grain yield is generally the most important criterion growers use to select which cultivar to grow. ‘Shelly’ (Reg. No. CV-1150, PI 681618) hard red spring wheat (Triticum aestivum L.) was released by the University of Minnesota Agricultural Experiment Station in 2016 because it combines very high grain yield with acceptable lodging resistance, grain protein concentration and end-use quality characteristics, and good resistance to the diseases Fusarium head blight, leaf rust, stripe rust, and stem rust. Shelly is a mid-late maturity, semidwarf cultivar that is well adapted to the north-central United States and is among the highest-yielding cultivars currently available.

Durum wheat (Triticum turgidum subsp. durum) represents only 5% of global wheat production. Durum production is limited by its very hard kernel texture, which requires specialized milling and limits end-product utilization. However, soft kernel durum wheat was recently developed to remove these constraints, but it has not until now been examined for its agronomic potential and pest resistance, which were the focus of this study. The soft durum lines were compared with two commercial hard red spring wheat varieties, Buck Pronto and Alum. Soft durum lines were relatively competitive for grain yield (i.e., >90%) with Buck Pronto at 16 of 34 locations. Increasing seeding rate did not increase grain yield of soft durum. The soft durum lines showed no tolerance of acid soils/Al, but exhibited moderate-to-strong resistance to stripe rust (caused by Puccinia striiformis f. sp. tritici). Good resistance to stem rust (caused by Puccinia graminis f. sp. tritici) and near complete resistance to dwarf bunt (caused by Tilletia controversa) were observed. Resistance to Hessian fly (Mayetiola destructor) was observed in some of the plants, with three of the durum lines showing a larger proportion of resistant plants. Varying levels of resistance to cereal cyst nematode (Heteroderma filipjevi) were recorded, with some lines highly resistant. These studies show that there is good agronomic potential in the current soft durum lines for moderate yield and good pest resistance. Further breeding efforts and germplasm introgression will likely improve the competitiveness of soft durum wheat with currently grown hard red spring wheat.

The identification and characterization of resistance genes should outpace the rapid emergence of new P. graminis f. sp. tritici races, such as TTRTF and TTKTT, to mitigate stem rust damage to wheat. The objective of the current study was to identify and characterize P. graminis f. sp. tritici race resistance association signals. A total of 250 North American spring wheat lines were evaluated at the seedling stage with a total of seven isolates including TKKTP, TKTTF, TKTTF, TRTTF, TTRTF, TTKSK, and TTKTT. The lines were genotyped by a GBS platform and 9,042 SNPs were used for identification of chromosome regions associated with resistance against the seven isolates. Strong association signals were detected on chromosomes 6BL (Sr11 gene region) and 4AL, likely Sr7a, for resistance against both TKKTP and TKTTF. Similarly, association signals were also detected on chromosomes 4AL (race TTRTF resistance) and 4BS (race TTKSK and TTKTT resistance). Association analysis based on mean phenotypic differences between closely related isolates identified QTL that were not elucidated by direct association mapping of the responses, individually. Overall, with the exception of race TRTTF, each race shared at least one association signal with another race. However, the number of race‐specific association signals are larger than that of association signals common among races suggesting the need for identifying and characterizing QTL/genes for newly emerging stem rust pathogen races. There was also high concordance between PCA‐based GWAS association signals and association signals from that of both single and multi‐locus mixed models.

The wheat stem rust fungus, Puccinia graminis f. sp. tritici (Pgt), race TTKSK and related races pose a serious threat to world wheat production. Knowing the effectiveness of wheat stem rust resistance (Sr) genes against Pgt race TTKSK is fundamental in mitigating this threat through resistance breeding. Sr15 was previously identified as being ineffective against Pgt race TTKSK. Here, multirace disease phenotyping data, linkage analyses, allelism testing and haplotype analyses are presented to support the conclusion that Sr15 is effective against Pgt race TTKSK. Resistance to race TTKSK was mapped to Sr15 in a biparental population. Thirty‐two accessions with Sr15 displayed seedling resistance phenotypes against race TTKSK. However, these accessions were susceptible as seedlings at high temperatures (22–25 °C), consistent with previous reports that the interaction between avirulent Pgt isolates and Sr15 is temperature‐sensitive. Markers STS638, wri4 and KASP_IWB30995 were found to predict the presence of Sr15, suggesting the utility of these assays for marker‐assisted selection in breeding programmes. The effectiveness of Sr15 to specific Pgt races and temperatures makes it a less‐desirable TTKSK‐effective gene. Wheat lines assayed as resistant to race TTKSK at the seedling stage may possess Sr15 and breeders should be aware of the limitations of Sr15 for conferring stem rust resistance.

Stem rust of wheat (caused by Puccinia graminis f.sp. tritici) gained high international attention in the last two decades, but does not occur regularly in Germany. Motivated by a regional epidemic in 2013, we analysed 15 spring and 82 winter wheat cultivars registered in Germany for their resistance to stem rust at the seedling stage and tested 79 of these winter wheat cultivars at the adult‐plant stage. A total of five seedling stem rust resistance genes were postulated: Sr38 occurred most frequently (n = 29), followed by Sr31 (n = 11) and Sr24 (n = 8). Sr7a and Sr8a occurred only in two spring wheat genotypes each. Four cultivars had effective seedling resistance to all races evaluated that could only be explained by postulating additional resistance genes (‘Hyland’, ‘Pilgrim PZO’, ‘Tybalt’) or unidentified gene(s) (‘Memory’). The three winter wheat cultivars (‘Hyland’ ‘Memory’ and ‘Pilgrim PZO’) were also highly resistant at the adult‐plant stage; ‘Tybalt’ was not tested. Resistance genes Sr24 and Sr31 highly protected winter wheat cultivars from stem rust at the adult‐plant stage in the field. Disease responses of cultivars carrying Sr38 varied. Mean field stem rust severity of cultivars without postulated seedling resistance genes ranged from 2.71% to 41.51%, nine of which were significantly less diseased than the most susceptible cultivar. This suggests adult‐plant resistance to stem rust may be present in German wheat cultivars.

Grain yield, protein content, and straw strength are the three primary traits that growers consider when selecting wheat (Triticum aestivum L.) cultivars in the Red River Valley region of Minnesota and North Dakota. ‘Norden’ (Reg. No. CV-1136, PI 667104) was released by the University of Minnesota Agricultural Experiment Station in 2012 because it represented a unique combination of these traits, in addition to good resistance to leaf rust (Puccinia triticina Eriks.) and Fusarium head blight (FHB, caused primarily by Fusarium graminearum Schwabe). Norden is a midmaturity, semidwarf cultivar that was selected in part because it contains the Lr34 gene for adult plant leaf rust resistance and the Fhb1 quantitative trait locus for FHB resistance.

Stem rust, caused by the fungus Puccinia graminis Pers. f. sp. tritici Ericks, is one of the most damaging diseases of wheat (Triticum aestivum L.). The recent emergence of the stem rust Ug99 race group poses a serious threat to world wheat production. Utilization of genetic resistance in cultivar development is the optimal way to control stem rust. Here, we report association mapping of stem rust resistance in a global spring wheat germplasm collection (2152 accessions) genotyped with the wheat iSelect 9K single-nucleotide polymorphism array. Using a unified mixed model method (or QK method), we identified a total of 47 loci that were significantly associated with various stem rust resistance traits including field disease resistance and seedling resistance against multiple stem rust pathogen races including BCCBC, TRTTF, TTKSK (Ug99), and TTTTF. The 47 loci could be further condensed into 11 quantitative trait locus (QTL) regions according to linkage disequilibrium information among adjacent markers. We postulate that these QTLs represent known stem rust resistance genes including Sr2, Sr6, Sr7a, Sr8a, Sr9h, Sr13, Sr28, and Sr36. We further employed a multilocus mixed model to explore marker-trait associations and identified two additional QTLs (one potentially represents Sr31) that were significantly associated with stem rust resistance against various races. Combinations of the most significant loci for each trait explained up to 38.6% of the phenotypic variance. Markers identified through this study could be used to track the genes or QTLs. Accessions with high numbers of resistance-associated alleles may serve as important breeding materials for stem rust resistance.

Array- or chip-based single nucleotide polymorphism (SNP) markers are widely used in genomic studies because of their abundance in a genome and lower cost per data point than older marker technologies. Genotyping-by-sequencing (GBS), a relatively newer approach of genotyping, suggests equal appeal because of its lesser cost per data point and the avoidance of ascertainment bias during genotyping. In this study, we compared the results from quantitative trait loci (QTL) mapping, marker distribution on linkage maps, genome size, recombination sites covered by the markers, and cost per polymorphic marker, as well as the methodology and workflow between the Illumina Infinium 9000 SNP-chip genotyping with GBS. Results indicate that while GBS offers similar genome coverage at almost one-fourth the cost of SNP chip, the SNP-chip method is less demanding of computational skills and resources. Eight and nine QTL were detected in the GBS and SNP-chip datasets, respectively, with one QTL common between the systems. Additionally, imputation accuracy of the GBS dataset was examined by introducing missing values randomly and imputing the missing alleles using a probabilistic principal components algorithm. Imputation results suggest recovery of the missing alleles with reasonable accuracy in datasets with low (up to 40%) amount of missing data is possible and can provide acceptable accuracy in gene mapping. Overall, the comparative results indicate that both approaches provide good genome coverage and similar mapping results. The choice of the genotyping platform is decided by the nature of the study and available resources.

The menstrual cycle has been implicated as a sex-specific biological process influencing psychological symptoms across a variety of disorders. Limited research exists regarding the role of the menstrual cycle in psychological symptoms among women with posttraumatic stress disorder (PTSD). The current study examined the severity of a broad range of psychological symptoms in both the early follicular (Days 2-6) and midluteal (6-10 days postlutenizing hormone surge) phases of the menstrual cycle in a sample of trauma-exposed women with and without PTSD (N = 49). In the sample overall, total psychological symptoms (d = 0.63), as well as depression (d = 0.81) and phobic anxiety (d = 0.81) symptoms, specifically, were increased in the early follicular compared to midluteal phase. The impact of menstrual cycle phase on phobic anxiety was modified by a significant PTSD × Menstrual Phase interaction (d = 0.63). Women with PTSD reported more severe phobic anxiety during the early follicular versus midluteal phase, whereas phobic anxiety did not differ across the menstrual cycle in women without PTSD. Thus, the menstrual cycle appears to impact fear-related symptoms in women with PTSD. The clinical implications of the findings and future research directions are discussed.

Wheat (Triticum spp.) stem rust, caused by Puc cinia graminis f. sp. tritici Eriks. and E. Henn. (Pgt), re-emerged as a devastating disease of wheat because of virulent race Ug99 (TTKSK). Many bread wheat ( T. aestivum L.) cultivars grown in North America are susceptible to Ug99 or its derivative races that carry additional viru lence. ‘Gage’ was released in 1963 mainly for its excellent field resistance to leaf rust (caused by Puccinia triticina Eriks) and stem rust. However, Gage’s resistance has not been genetically char acterized, which would facilitate its use in breed ing programs. To better define the nature of the resistance in Gage, we created an F 2 population and the corresponding F 2:3 and F 4:5 families from crosses between Gage and stem rust suscep tible cultivar ‘Bill Brown’. Inheritance of resis tance to Pgt race QFCSC and molecular marker analysis indicated that Sr2 and additional genes explain the stem rust resistance of Gage. Using seedling plant infection types from the F 2 , F 2:3

The USDA–ARS National Small Grains Collection (NSGC) maintains germplasm representing global diversity of small grains and their wild relatives. To evaluate the utility of the NSGC durum wheat ( L. ssp. ) accessions, we assessed genetic diversity and linkage disequilibrium (LD) patterns in a durum core subset containing 429 lines with spring growth habit originating from 64 countries worldwide. Genetic diversity estimated using wheat single-nucleotide polymorphism (SNP) markers showed considerable diversity captured in this collection. Average LD decayed over a genetic distance to within 3 cM at = 0.2, with a fast LD decay for markers linked at >5 cM. We evaluated accessions for resistance to wheat stem rust, caused by a fungal pathogen, Pers. Pers. f. sp. Eriks. and E. Henn (), using races from both eastern Africa and North America, at seedling and adult plant stages. Five accessions were identified as resistant to all stem rust pathogen races evaluated. Genome-wide association analysis detected 17 significant associations at the seedling stage with nine likely corresponding to , , and and the remaining potentially being novel genes located on six chromosomes. A higher frequency of resistant accessions was found at the adult plant stage than at the seedling stage. However, few significant associations were detected possibly a result of strong G × E interactions not properly accounted for in the mixed model. Nonetheless, the resistant accessions identified in this study should provide wheat breeders with valuable resources for improving stem rust resistance.

Stem rust, caused by Puccinia graminis f. sp. tritici (pgt), is one of the most serious diseases of wheat (Triticum aestivum L.) worldwide. The discovery of new p in Africa, Ug99 and its variants, brings a new threat to global wheat production. p yramiding several stem

Aegilops tauschii Coss., the D genome donor of hexaploid wheat, Triticum aestivum L., has been used extensively for the transfer of agronomi- cally important traits to wheat, including stem rust resistance genes Sr33, Sr45, and Sr46. To identify potentially new stem rust resistance genes in A. tauschii germplasm, we evaluated 456 nonduplicated accessions deposited in the USDA National Small Grains Collection (Aber- deen, ID) and the Wheat Genetic and Genomic Resources Center collection (Kansas State University, Manhattan, KS), with races TTKSK (Ug99), TRTTF, TTTTF, TPMKC, RKQQC, and QTHJC of Puccinia graminis Pers.:Pers. f. sp. tritici Eriks. & E. Henn. Ninety-eight acces- sions (22%) were identifi ed as resistant to race TTKSK. A broad range of resistant infection types (; to 2+) were found in reaction to race TTKSK. Resistance was signifi cantly associ- ated among most of the races in pairwise com- parisons. However, resistance was largely race specifi c. Only 12 of the accessions resistant to race TTKSK were also resistant to the other fi ve races. Results from this germplasm screening will facilitate further studies on the genetic char- acterization of accessions with potentially novel sources of resistance to race TTKSK.

The wheat stem rust resistance gene Sr22 confers resistance to Puccinia graminis f. sp. tritici Pers. race TTKSK (also known as Ug99) that developed in Africa and is an immediate threat to world wheat production. The resistance gene is present on a chromosomal translocation derived from Triticum boeoticum Boiss., which has a genome that is partially homologous to the A genome of T. aestivum L. Sr22 has been deployed in a limited number of cultivars due to poor agronomic performance of lines carrying the resistance gene. Linkage analysis of simple sequence repeat (SSR) markers on chromosome 7A was performed to identify loci closely linked to Sr22. The most tightly linked proximal and distal SSR marker loci were Xcfa2123 and Xwmc633, respectively. A two-step process was then used to develop resistant lines having smaller chromosome segments derived from the diploid donor. First, individuals in which a single recombination event had occurred between wheat and the Sr22 introgression were identifi ed in the mapping populations. In spite of reduced recombination between T. boeoticum and T. aestivum chromosomes, suffi cient recombination events were found among 398 F 3:4 lines derived from recombinant F 2 progeny to recover multiple resistant individuals with smaller alien introgressions. Resistant lines were identifi ed having less than 6% of the chromosome arm derived from T. boeoticum. These lines may provide a more agronomically desirable source of Sr22 that can be readily deployed in cultivars resistant to Ug99.

Quantitative adult plant resistance (APR) to stem rust (Puccinia graminis f. sp. tritici) is an important breeding target in wheat (Triticum aestivum L.) and a potential target for genomic selection (GS). To evaluate the relative importance of known APR loci in applying GS, we characterized a set of CIMMYT germplasm at important APR loci and on a genome-wide profile using genotyping-by-sequencing (GBS). Using this germplasm, we describe the genetic architecture and evaluate prediction models for APR using data from the international Ug99 stem rust screening nurseries. Prediction models incorporating markers linked to important APR loci and seedling phenotype scores as fixed effects were evaluated along with the classic prediction models: Multiple linear regression (MLR), Genomic best linear unbiased prediction (G-BLUP), Bayesian Lasso (BL), and Bayes Cp (BCp). We found the Sr2 region to play an important role in APR in this germplasm. A model using Sr2 linked markers as fixed effects in G-BLUP was more accurate than MLR with Sr2 linked markers (p-value = 0.12), and ordinary G-BLUP (p-value = 0.15). Incorporating seedling phenotype information as fixed effects in G-BLUP did not consistently increase accuracy. Overall, levels of prediction accuracy found in this study indicate that GS can be effectively applied to improve stem rust APR in this germplasm, and if genotypes at Sr2 linked markers are available, modeling these genotypes as fixed effects could lead to better predictions.