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Aim: Understanding the spatial ecology of animal movements is a critical element in conserving long-lived, highly mobile marine species. Analyzing networks developed from movements of six sea turtle species reveals marine connectivity and can help prioritize conservation efforts. Location: Global. Methods: We collated telemetry data from 1235 individuals and reviewed the literature to determine our dataset's representativeness. We used the telemetry data to develop spatial networks at different scales to examine areas, connections, and their geographic arrangement. We used graph theory metrics to compare networks across regions and species and to identify the role of important areas and connections. Results: Relevant literature and citations for data used in this study had very little overlap. Network analysis showed that sampling effort influenced network structure, and the arrangement of areas and connections for most networks was complex. However, important areas and connections identified by graph theory metrics can be different than areas of high data density. For the global network, marine regions in the Mediterranean had high closeness, while links with high betweenness among marine regions in the South Atlantic were critical for maintaining connectivity. Comparisons among species-specific networks showed that functional connectivity was related to movement ecology, resulting in networks composed of different areas and links. Main conclusions: Network analysis identified the structure and functional connectivity of the sea turtles in our sample at multiple scales. These network characteristics could help guide the coordination of management strategies for wide-ranging animals throughout their geographic extent. Most networks had complex structures that can contribute to greater robustness but may be more difficult to manage changes when compared to simpler forms. Area-based conservation measures would benefit sea turtle populations when directed toward areas with high closeness dominating network function. Promoting seascape connectivity of links with high betweenness would decrease network vulnerability. © 2022 The Authors. Diversity and Distributions published by John Wiley & Sons Ltd.

Here we describe and evaluate the success of a multi-institutional Centre for Doctoral Training (CDT), which was established to address a UK skills shortage in Soil Science. The government-funded ‘STARS’ (Soils Training And Research Studentships) CDT was established in 2015 across a range of universities and research institutes in the UK. It recruited 41 PhD students equitably split across the institutions under four core research themes identified as being central to the national need, namely, (1) Understanding the soil–root interface, (2) Soils and the delivery of ecosystem services, (3) Resilience and response of functions in soil systems and (4) Modelling the soil ecosystem at different spatial and temporal scales. In addition, the STARS CDT provided a diverse skills programme, including: Holistic training in soils, the promotion of collegiality and joint working, strategies to promote science and generate impact, internships with end users (e.g., policymakers, industry), personal wellbeing, and ways to generate a lasting soils training legacy. Overall, both supervisors and students have reported a positive experience of the CDT in comparison to the conventional doctoral training programmes, which have less discipline focus and little chance for students to scientifically interact with their cohorts or to undertake joint training activities. The STARS CDT also allowed students to freely access research infrastructure across the partner institutions (e.g., long-term field trials, specialised analytical facilities, high-performance computing), breaking down traditional institutional barriers and thus maximising the students' potential to undertake high-quality research. The success and legacy of the STARS CDT can be evidenced in many ways; however, it is exemplified by the large number and diversity of journal papers produced, the lasting collaborations, final career destinations, and creation of a web-based legacy portal including new and reflective video material. STARS CDT, Grant/Award Numbers: NE/V017667/1, NE/R010218/1, NE/M009106/1; UKRI

Extreme weather events have become a dominant feature of the narrative surrounding changes in global climate with large impacts on ecosystem stability, functioning and resilience; however, understanding of their risk of co‐occurrence at the regional scale is lacking. Based on the UK Met Office’s long‐term temperature and rainfall records, we present the first evidence demonstrating significant increases in the magnitude, direction of change and spatial co‐localisation of extreme weather events since 1961. Combining this new understanding with land‐use data sets allowed us to assess the likely consequences on future agricultural production and conservation priority areas. All land‐uses are impacted by the increasing risk of at least one extreme event and conservation areas were identified as the hotspots of risk for the co‐occurrence of multiple event types. Our findings provide a basis to regionally guide land‐use optimisation, land management practices and regulatory actions preserving ecosystem services against multiple climate threats.

A major challenge in soil science is to monitor and understand the state and change of soils at a national scale to inform decision making and policy. To address this, there is a need to identify key parameters for soil health and function and determine how they relate to other parameters, including traditional soil surveys. Here we present a national‐scale dataset of topsoil sampled as part of a wider agri‐environment monitoring scheme in Wales, UK. Over 1,350 topsoils (0–15 cm) were sampled across a very wide range of habitats and a range of physical, chemical and biological soil quality indicators were measured. We show consistent differences in soil physicochemical properties across habitat types, with carbon decreasing and pH increasing across the habitat productivity gradient from bogs through woodlands and grasslands to arable systems. The soils within our dataset are largely within the limits identified as important for supporting habitat function, with the exception of excessive phosphate levels in mesotrophic grassland. Cluster detection methods identified four soil functional classes based on measured topsoil properties, which were more related to habitat type than the genesis‐based soil classification from soil maps. These soil functional classes can be interpreted as phenoforms within the soil genoforms found by traditional soil classification. This shows the importance of land‐use management in determining the soil health and functional capacity of soils. Our work provides an account of the current state of soil health in Wales, its relationship to soil function and a baseline for future monitoring to track changes against agri‐environment and other policy targets.

Sulphate‐reducing bacteria (SRB) represent a key biological component of the global sulphur (S) cycle and are common in soils, where they reduce SO42− to H2S during the anaerobic degradation of soil organic matter. The factors that regulate their distribution in soil, however, remain poorly understood. We sought to determine the ecological patterns of SRB richness within a nationwide 16S metabarcoding dataset. Across 436 sites belonging to seven contrasting temperate land uses (e.g., arable, grasslands, woodlands, heathland and bog), SRB richness was relatively low across land uses but greatest in grasslands and lowest in woodlands and peat‐rich soils. There was a shift in dominant SRB taxa from Desulfosporosinus and Desulfobulbus in arable and grassland land uses to Desulfobacca in heathland and bog sites. In contrast, richness of other generalist anaerobic bacterial taxa found in our dataset (e.g., Clostridium, Geobacter and Pelobacter) followed a known trend of declining richness linked to land‐use productivity. Overall, the richness of SRBs and anaerobes had strong positive correlations with pH and sulphate concentration and strong negative relationships with elevation, soil organic matter, total carbon and carbon‐to‐nitrogen ratio. It is likely that these results reflect the driving influence of pH and competition for optimal electron acceptors with generalist anaerobic bacteria on SRB richness.

Objectives Historically at a multi-hospital residency program, there was an unexpected number of non-urgent consults from the county hospital emergency room (ER) that caused residents to make more trips between hospitals and come closer to violating duty hours. Moreover, there was also a poor follow-up rate for these patients. An alternate pathway to redirect such consults to the Otorhinolaryngology-Head and Neck Surgery (ORL-HNS) clinic, staffed by an attending physician, was devised. This study illustrates how an undemanding process change can improve access to care, and resident duty hours and satisfaction. Study Design Quality Improvement Study. Methods The average rate of no-show appointments and overall number of patients referred from the county hospital ER; a survey of impact on resident workload; and an average number of on-call resident trips to county hospital were compared in the 12 months before and after implementation of an expedited ER referral pathway. Results The overall number of patients referred to clinic from ER increased by 35% (123 to 166 patients). The average number of completed visits for patients referred to the ORL-HNS clinic from the ER increased by 29% (91 to 117 patients). There was no statistically significant change in the no-show rate of said patients. The average number of overnight resident trips to the county hospital, frequency of resident unpreparedness for routine clinical duty and need to alter schedule to avoid duty hour violations all decreased, while resident satisfaction increased. Conclusions An undemanding process change in a safety-net, publicly-funded, county hospital setting can decrease resident workload and improve satisfaction while possibly improving patient access to specialty clinic care and follow-up rates for patients. Level of Evidence clinical outcomes, level IV.

Landscape composition and land use impact the interactions between soil and vegetation. Differences in micro-behaviour, driven by the interplay of heterogeneous soil and vegetation dynamics, affect emergent characteristics across a landscape. Scaling approaches to understand the drivers of these emergent characteristics have been attempted, but the blueprint of interacting biophysical processes in landscapes is inherently messy and often still unknown. A complicating factor is single disciplinary focus in environmental sciences. Integrated knowledge is vital especially in view of future challenges posed by climate change, population growth, and soil threats. In this paper, we give examples of biophysical interactions that occur across various temporal and spatial scales and discuss how connectivity can be useful for bridging disciplines and scales to increase our understanding.

Near-surface soil conditions (i.e., moisture and temperature) moderate mass and energy exchange at the soil–atmosphere interface. While remote sensing offers an effective means for mapping near-surface moisture content across large areas, in situ measurements, targeting those specific remotely sensed soil depths, are poorly understood and high-resolution near-surface measurement capabilities are lacking. Time domain reflectometry (TDR) is a well-established, accurate measurement method for soil dielectric permittivity and moisture content. A TDR array was designed to provide centimeter-resolution measurements of near-surface soil moisture. The array consists of nine stainless steel TDR rods spaced 1 cm apart, acting as waveguide pairs to form eight two-rod TDR probes in series. A critical aspect of the design was matching the spacing of the coaxial cable–TDR rod transition to avoid unwanted reflections in the waveforms. The accuracy of the TDR array permittivity measurement (±1 permittivity unit) was similar to that of conventional TDR as verified in dielectric liquids. Electric field numerical simulations showed minimal influence of adjacent rods during a given rod-pair measurement. The evaporation rate determined by the TDR array compared well with mass balance data in a laboratory test. Near-surface soil moisture profile dynamics were monitored at centimeter-depth resolution using the TDR array in a field experiment where volumetric moisture content estimates (0–8 cm) were within 2% of conventional three-rod TDR probes averaging across 0 to 8 cm and from 1- to 3-cm depths

Soil organic matter (SOM) is an indicator of sustainable land management as stated in the global indicator framework of the United Nations Sustainable Development Goals (SDG Indicator 15.3.1). Improved forecasting of future changes in SOM is needed to support the development of more sustainable land management under a changing climate. Current models fail to reproduce historical trends in SOM both within and during transition between ecosystems. More realistic spatio-temporal SOM dynamics require inclusion of the recent paradigm shift from SOM recalcitrance as an 'intrinsic property' to SOM persistence as an 'ecosystem interaction'. We present a soil profile, or pedon-explicit, ecosystem-scale framework for data and models of SOM distribution and dynamics which can better represent land use transitions. Ecosystem-scale drivers are integrated with pedon-scale processes in two zones of influence. In the upper vegetation zone, SOM is affected primarily by plant inputs (above- and belowground), climate, microbial activity and physical aggregation and is prone to destabilization. In the lower mineral matrix zone, SOM inputs from the vegetation zone are controlled primarily by mineral phase and chemical interactions, resulting in more favourable conditions for SOM persistence. Vegetation zone boundary conditions vary spatially at landscape scales (vegetation cover) and temporally at decadal scales (climate). Mineral matrix zone boundary conditions vary spatially at landscape scales (geology, topography) but change only slowly. The thicknesses of the two zones and their transport connectivity are dynamic and affected by plant cover, land use practices, climate and feedbacks from current SOM stock in each layer. Using this framework, we identify several areas where greater knowledge is needed to advance the emerging paradigm of SOM dynamics-improved representation of plant-derived carbon inputs, contributions of soil biota to SOM storage and effect of dynamic soil structure on SOM storage-and how this can be combined with robust and efficient soil monitoring.

Grasslands cover more than 70% of the world's agricultural land playing a pivotal role in global food security, economy, and ecology due to their flexibility and functionality. Climate change, characterized by changes in temperature and precipitation patterns, and by increased levels of greenhouse gases in the atmosphere, is anticipated to increase both the frequency and severity of extreme weather events, such as drought, heat waves, and flooding. Potentially, climate change could severely compromise future forage crop production and should be considered a direct threat to food security. This review aimed to summarize our current understanding of the physiological and metabolic responses of temperate grasses to those abiotic stresses associated with climate change. Primarily, substantial decreases in photosynthetic rates of cool‐season grasses occur as a result of high temperatures, water‐deficit or water‐excess, and elevated ozone, but not CO2 concentrations. Those decreases are usually attributed to stomatal and non‐stomatal limitations. Additionally, while membrane instability and reactive oxygen species production was a common feature of the abiotic stress response, total antioxidant capacity showed a stress‐specific response. Furthermore, climate change‐related stresses altered carbohydrate partitioning, with implications for biomass production. While water‐deficit stress, increased CO2, and ozone concentrations resulted in higher carbohydrate content, the opposite occurred under conditions of heat stress and flooding. The extent of damage is greatly dependent on location, as well as the type and intensity of stress. Fortunately, temperate forage grass species are highly heterogeneous. Consequently, through intra‐ and in particular inter‐specific plant hybridization (e.g., Festuca x Lolium hybrids) new opportunities are available to harness, within single genotypes, gene combinations capable of combating climate change.

Background The impact of ethnicity and socio-economic status (SES) on glycaemic control during childhood Type 1 diabetes is poorly understood in England and Wales. Methods We studied 18 478 children with Type 1 diabetes (< 19 years) attending diabetes clinics and included in the 2012–2013 National Paediatric Diabetes Audit. Self-identified ethnicity was categorized as white, Asian, black, mixed, other and ‘not-stated’ (did not to divulge ethnicity). A small area measure of SES was estimated from the Index of Multiple Deprivation. Multiple linear regression was used to assess associations between ethnicity, SES and glycaemic control (mean HbA1c levels) accounting for age, gender and diabetes duration. The impact of insulin pump use on the ethnicity/SES–HbA1c associations was tested in 13 962 children. Results All children from minority ethnic groups had higher mean HbA1c compared with white children, with largest differences observed in black and mixed ethnicities [8 mmol/mol (2.9%), 95% CI 5–11 and 7 mmol/mol (2.8%), 95% CI 5–9, respectively]. Lower SES was associated with higher mean HbA1c with a dose effect. The lowest SES group had a mean HbA1c that was 7 mmol/mol (2.8%) (95% CI 6–8) higher compared with the highest SES group, adjusted for ethnicity. Estimates for ethnicity were attenuated, but significant on adjustment for SES. Fewer non-white (white 20.3 vs. black 5.5%) and deprived (least deprived 21.1 vs. most deprived 13.2%) children were on insulin pump therapy. Ethnicity and SES remained significant predictors of HbA1c after accounting for insulin pump use. Conclusion The association between ethnicity and glycaemic control persists after adjustment for deprivation and pump use. An alternative approach to intensive insulin therapy might benefit these vulnerable children.

The extinction risk of sharks, rays and chimaeras is higher than that for most other vertebrates due to low intrinsic population growth rates of many species and the fishing intensity they face. The Arabian Sea and adjacent waters border some of the most important chondrichthyan fishing and trading nations globally, yet there has been no previous attempt to assess the conservation status of species occurring here. Using IUCN Red List of Threatened Species Categories and Criteria and their guidelines for application at the regional level, we present the first assessment of extinction risk for 153 species of sharks, rays and chimaeras. Results indicate that this region, home to 15% of described chondrichthyans including 30 endemic species, has some of the most threatened chondrichthyan populations in the world. Seventy‐eight species (50.9%) were assessed as threatened (Critically Endangered, Endangered or Vulnerable), and 27 species (17.6%) as Near Threatened. Twenty‐nine species (19%) were Data Deficient with insufficient information to assess their status. Chondrichthyan populations have significantly declined due to largely uncontrolled and unregulated fisheries combined with habitat degradation. Further, there is limited political will and national and regional capacities to assess, manage, conserve or rebuild stocks. Outside the few deepsea locations that are lightly exploited, the prognosis for the recovery of most species is poor in the near‐absence of management. Concerted national and regional management measures are urgently needed to ensure extinctions are avoided, the sustainability of more productive species is secured, and to avoid the continued thinning of the regional food security portfolio.

Geospatial semantic graphs provide a robust foundation for representing and analyzing remote sensor data. In particular, they support a variety of pattern search operations that capture the spatial and temporal relationships among the objects and events in the data. However, in the presence of large data corpora, even a carefully constructed search query may return a large number of unintended matches. This work considers the problem of calculating a quality score for each match to the query, given that the underlying data are uncertain. As a result, we present a preliminary evaluation of three methods for determining both match quality scores and associated uncertainty bounds, illustrated in the context of an example based on overhead imagery data.

Soil bulk density (BD) is measured during soil monitoring. Because it is spatially variable, an appropriate sampling protocol is required. This paper shows how information on short-range variability can be used to quantify uncertainty of estimates of mean BD and soil organic carbon on a volumetric basis (SOCv) at a sampling site with different sampling intensities. We report results from two contrasting study areas, with mineral soil and with peat. More sites should be investigated to develop robust protocols for national-scale monitoring, but these results illustrate the methodology. A 20 × 20-m2 monitoring site was considered and sampling protocols were evaluated under geostatistical models of our two study areas. At sites with local soil variability comparable to our mineral soil, sampling at 16 points (4 × 4 square grid of interval 5 m) would achieve a root mean square error (RMSE) of the sample mean value of both BD and SOCv of less than 5% of the mean (topsoil and subsoil). Pedotransfer functions (PTFs) gave predictions of mean soil BD at a sample site, comparable to our study area on mineral soil, with similar precision to a single direct measurement of BD. On peat soils comparable to our second study area, the mean BD for the monitoring site at depth 0–50 cm would be estimated with RMSE to be less than 5% of the mean with a sample of 16 cores, but at greater depths this criterion cannot be achieved with 25 cores or fewer.

The ecosystem services approach endeavors to incorporate the economic value of ecosystems into decision making. This is because many natural resources are subject to market failure. As a result, many economic decisions omit the impact that natural resource use has on the earth’s resources and the life support system it provides. Hence, one of the objectives of the ecosystem services approach is to employ economic valuation of natural resources in micro- and macroeconomic policy design, implementation, and evaluation. In this article we examine valuation concepts, and ask why we might attempt to economically value the contribution of soils to the provision of ecosystem services. We go on to examine economic valuation methods and review economic valuation of soils. By surveying prices of soils on the web we are able to make a first, limited global assessment of direct market value of topsoil prices. We then consider other research efforts to value soil. Finally, we consider how the valuation of soil can meaningfully be used in the introduction of improved resource management mechanisms such as decision support tools on which valuation can be based, within the UN’s System of Environmental and Economic Accounts (SEEA) and policy mechanisms like Payments for Ecosystem Services (PES).

Although topical TLR7 therapies such as imiquimod have proved successful in the treatment of dermatological malignancy, systemic delivery may be required for optimal immunotherapy of nondermatological tumors. We report that intravenous delivery of the novel small molecule TLR7 agonist, DSR-6434, leads to the induction of type 1 interferon and activation of T and B lymphocytes, NK and NKT cells. Our data demonstrate that systemic administration of DSR-6434 enhances the efficacy of ionizing radiation (IR) and leads to improved survival in mice bearing either CT26 or KHT tumors. Of the CT26 tumor-bearing mice that received combined therapy, 55% experienced complete tumor resolution. Our data reveal that these long-term surviving mice have a significantly greater frequency of tumor antigen specific CD8+ T cells when compared to age-matched tumor-naive cells. To evaluate therapeutic effects on spontaneous metastases, we showed that combination of DSR-6434 with local IR of the primary tumor significantly reduced metastatic burden in the lung, when compared to time-matched cohorts treated with IR alone. The data demonstrate that systemic administration of the novel TLR7 agonist DSR-6434 in combination with IR primes an antitumor CD8+ T-cell response leading to improved survival in syngeneic models of colorectal carcinoma and fibrosarcoma. Importantly, efficacy extends to sites outside of the field of irradiation, reducing metastatic load. Clinical evaluation of systemic TLR7 therapy in combination with IR for the treatment of solid malignancy is warranted. What's new? Recent evidence suggests that damage from ionizing radiation (IR) can render tumor cells immunogenic. Unfortunately, established tumors often suppress this anti-tumor immune response. Combination therapy with IR and immune-modulators such as Toll-like-receptor (TLR) family agonists may overcome this problem. In this proof-of-concept study, the authors examined one such small-molecule drug, called DSR-6434. They found that systemic administration of DSR-6434 can enhance the effectiveness of radiotherapy in mice, and that this occurs via the generation of tumor-specific immune responses. Easily delivered drugs that activate TLR-family molecules may thus offer a promising therapeutic approach.

This study combines two unprecedentedly high resolution (250 × 250 m) maps of soil erosion (inter-rill and rill processes) and soil organic carbon to calculate a global estimate of erosion-induced organic carbon (C) displacement. The results indicate a gross C displacement by soil erosion of 2.5-0.3+0.5 Pg C/year. The greatest share of displaced C (64%) comes from seminatural lands and forests. This suggests that lateral C transfer from erosion in noncroplands may play a more important role than previously assumed.

Invasion of sedge in the wetlands of Trinidad is causing an increase in wetland dry season fires and a reduction in coastal pasture, adversely affecting the livelihoods of people living and working in the wetlands. The purpose of our research was to determine if soil properties and water quality could help to explain why the area of sedge is expanding. We conducted an observational study, using geophysical methods and standard sampling techniques to determine the relationship between grass and sedge zonation and soil properties and water quality. Our findings showed that both the electrical conductivity of the soil solution at saturation (ECe) and surface water electrical conductivity (ECw) were significantly higher (P < 0.05) in sedge communities than in grass communities (mean ECe of sedge = 4.4 dS/m; mean ECe grass = 3.7 dS/m; mean ECw of sedge = 0.5 dS/m; mean ECw of grass = 0.2 dS/m). Our interpretation is that changes to the local hydrology by channelizing and levying rivers, reducing wetland flooding, is enhancing saline intrusion and facilitating the invasion of brackish water sedge species into non-salt-tolerant grassland areas.

1. The Green Revolution successfully increased food production but in doing so created a legacy of inherently leaky and unsustainable agricultural systems. Central to this are the problems of excessive nutrient mining. If agriculture is to balance the needs of food security with the delivery of other ecosystem services, then current rates of soil nutrient stripping must be reduced and the use of synthetic fertilisers made more efficient. 2. We explore the global extent of the problem, with specific emphasis on the failure of macronutrient management (e.g. nitrogen, phosphorus) to deliver continued improvements in yield and the failure of agriculture to recognise the seriousness of micronutrient depletion (e.g. copper, zinc, selenium). 3. Nutrient removals associated with the relatively immature, nutrient-rich soils of the UK are contrasted with the mature, nutrient-poor soils of India gaining insight into the emerging issue of nutrient stripping and the long-term implications for human health and soil quality. Whilst nutrient deficiencies are rare in developed countries, micronutrient deficiencies are commonly increasing in less-developed countries. Increasing rates of micronutrient depletion are being inadvertently accomplished through increasing crop yield potential and nitrogen fertiliser applications. 4. Amongst other factors, the spatial disconnects caused by the segregation and industrialisation of livestock systems, between rural areas (where food is produced) and urban areas (where food is consumed and human waste treated) are identified as a major constraint to sustainable nutrient recycling. 5. Synthesis and applications. This study advocates that agricultural sustainability can only be accomplished using a whole-systems approach that thoroughly considers nutrient stocks, removals, exports and recycling. Society needs to socially and environmentally re-engineer agricultural systems at all scales. It is suggested that this will be best realised by national-scale initiatives. Failure to do so will lead to an inevitable and rapid decline in the delivery of provisioning services within agricultural systems.

Soil texture and the soil water characteristic are key properties used to estimate flow and transport parameters. Determination of clay content is therefore critical for understanding of plot-scale soil heterogeneity. With increasing interest in proximal soil sensing, there is the need to relate obtained signals to soil properties of interest. Inference of soil texture, especially clay mineral content, from instrument response from electromagnetic induction and radiometric methods is of substantial interest. However, the cost of soil sampling and analysis required to link proximal measurements and soil properties, for example, clay mineral content, can sometimes outweigh the benefits of using a fast proximal technique. In this paper, we propose that determination of a soil's hygroscopic water content at 50% atmospheric relative humidity (RH50), which is time and cost efficient, and particularly suitable for developing countries, can act as a useful surrogate for clay content in interpreting soil spatial patterns based on proximal signals. We used standard clays such as kaolinite, illite, and montmorillonite to determine the water release characteristic as a function of hygroscopic water content. We also determined clay content of soils from temperate (Arizona, United States) and tropical (Trinidad) regions using the hydrometer method and hygroscopic water content for soils equilibrated at RH50. We found linear dependence of clay percentage and RH50 for a range of soil mineralogies. Hygroscopic water measurements offer an inexpensive and simple way to estimate site-specific clay mineral content that in turn can be used to interpret geophysical signal data in reconnaissance surveys.

Objective Rheumatoid arthritis (RA) is prevalent in North American Native populations, with a high frequency of multicase families and seropositivity in first-degree relatives. This study was undertaken to determine whether the serum cytokine profile of first-degree relatives of North American Native patients with RA differed from that of individuals with no family history of autoimmunity and whether there was an association with RA autoantibodies. Methods North American Native patients with RA (n = 105), their first-degree relatives (n = 273), healthy North American Native controls (n = 200), and Caucasian controls (n = 150) were studied. Serum levels of 42 cytokines were tested using a multiplex laser bead assay. Rheumatoid factor (RF), anti–cyclic citrullinated peptide 2 (anti–CCP-2), monocyte chemotactic protein 1 (MCP-l), and high-sensitivity C-reactive protein (hsCRP) were tested by enzyme-linked immunosorbent assay, and HLA–DRB1 alleles by specific primers. Discriminant analysis and logistic regression classified individuals based on their cytokine profile. Results The prevalence of RF (cutoff level predetermined to include 5% of Caucasian controls) and anti-CCP (cutoff level of ≥40 units) was, respectively, 88% and 81% in the RA patients, 34% and 9% in first-degree relatives, and 9% and 4% in North American Native controls; the prevalence of anti-CCP was 0% in Caucasian controls. Levels of most cytokines were highest in RA patients; 17 of 40 cytokines (43%) were significantly higher in first-degree relatives than in controls, including multiple proinflammatory cytokines. Discriminant analysis showed a notable distinction between the groups, with 85% classification accuracy. First-degree relatives had markedly higher MCP-1 and hsCRP levels than North American Native controls, but there was no consistent association with RA autoantibodies. Conclusion Our findings indicate that levels of multiple cytokines and hsCRP are higher in first-degree relatives of North American Native patients with RA compared to individuals from a nonautoimmune background. These data suggest that elevated baseline cytokine levels may be part of the risk profile for developing RA.

The higher plant Golgi apparatus consists of hundreds of individual Golgi stacks which move along the cortical ER, propelled by the actomysin system. Anterograde and retrograde transport between the endoplasmic reticulum (ER) and the plant Golgi occurs over a narrow interface (around 500 nm) and is generally considered to be mediated by COP-coated vesicles. Previously, ER exit sites (ERES) have been identified on the basis of to localization of transiently expressed COPII-coat proteins. As a consequence it has been held that ERES in higher plants are intimately associated with Golgi stacks, and that both move together as an integrated structure: the "secretory unit". Using a new COPII marker, as well as YFP-SEC24 (a bona fide COPII coat protein), we have made observations on tobacco leaf epidermis at high resolution in the CLSM. Our data clearly shows that COPII fluorescence is associated with the Golgi stacks rather than the surface of the ER and probably represents the temporary accumulation of COPII vesicles in the Golgi matrix prior to fusion with the cis-Golgi cisternae. We have calculated the numbers of COPII vesicles which would be required to provide a typical Golgi-associated COPII-fluorescent signal as being much less than 20. We have discussed the consequences of this and question the continued usage of the term "secretory unit".

Summary Here we describe refinements in the processing of high-pressure frozen samples of delicate plant tissues for immuno-electron microscopy. These involve: shortened freeze-substitution schedules, lower temperatures during processing and polymerisation, the avoidance of temperature fluctuations and the optimisation of heat transfer from the specimens using small disposable aluminium containers. The application of these modifications leads to very good structural preservation and selective membrane contrast. As a result, the versatility of the method is increased since not only immuno-electron microscopical studies can be performed but often the quality is also quite suitable for structural investigations.

A number of scientists have named our age the Anthropocene because humanity is globally affecting Earth systems, including the soil. Global soil change raises important questions about the future of soil, the environment, and human society. Although many soil scientists strive to understand human forcings as integral to soil genesis, there remains an explicit need for a science of anthropedology to detail how humanity is a fully fledged soil-forming factor and to understand how soil change affects human well being. The development and maturation of anthropedology is critical to achieving land-use sustainability and needs to be nurtured by all soil disciplines, with inputs from allied sciences and the humanities,. The Soil Science Society of America (SSSA) has recently approved a cross-divisional Working Group on Soil Change, which aims to advance the basic and applied science of anthropedology, to facilitate networks of scientists, long-term soil field studies, and regional databases and modeling, and to engage in new modes of communications about human–soil relations. We challenge all interested parties, especially young scientists and students, to contribute to these activities and help grow soil science in the Anthropocene.

A zebra shark, Stegostoma fasciatum, held in captivity at the Burj Al Arab aquarium, produced embryos and pups in the absence of a male. A total of 15 pups were produced from eggs laid within the aquarium over a period of four consecutive years commencing 2007. Parthenogenesis was confirmed through DNA analysis for three pups sampled during the first two consecutive egg cycles and is presumed to be the method of reproduction responsible thereafter.

Introduction: The posterior circumflex humeral artery (PCHA) travels together with the axillary nerve through the quadrilateral space of the shoulder. Angiographic occlusion of this artery upon abduction and external rotation (ABER) of the arm has been accepted as evidence of mechanical compression of the axillary nerve and thus considered pathognomonic of quadrilateral space syndrome (QSS). The specificity of this sign for QSS has however been called into question as there are, to date, limited data on the incidence of axillary neurovascular compression during ABER in a normal population. We set out to determine the rate of stenosis or occlusion of the PCHA on ABER in healthy volunteers using ultrasound. Methods: Healthy volunteers asymptomatic for shoulder complaints were recruited from patients attending the clinic for ultrasound imaging not related to the shoulder, as well as volunteers among staff. Doppler sampling of the PCHA of both shoulders of participants was conducted in neutral and abduction and externally rotated positions. Each shoulder was treated as a separate entity. Results: Results showed that 15/93 (16%) of shoulders demonstrated Doppler ultrasound evidence of occlusion or significant stenosis in the absence of shoulder complaints. Conclusion: Occlusion or stenosis of the PCHA on ABER is an uncommon finding in an asymptomatic population. Axillary neurovascular compression is unlikely if colour Doppler ultrasound does not show PCHA compromise during ABER.

Vesicular glutamate transporters (VGLUTs) have been extensively studied in various neuronal systems, but their expression in visceral sensory and autonomic neurons remains to be analyzed in detail. Here we studied VGLUTs type 1 and 2 (VGLUT(1) and VGLUT(2) , respectively) in neurons innervating the mouse colorectum. Lumbosacral and thoracolumbar dorsal root ganglion (DRG), lumbar sympathetic chain (LSC), and major pelvic ganglion (MPG) neurons innervating the colorectum of BALB/C mice were retrogradely traced with Fast Blue, dissected, and processed for immunohistochemistry. Tissue from additional naïve mice was included. Previously characterized antibodies against VGLUT(1) , VGLUT(2) , and calcitonin gene-related peptide (CGRP) were used. Riboprobe in situ hybridization, using probes against VGLUT(1) and VGLUT(2) , was also performed. Most colorectal DRG neurons expressed VGLUT(2) and often colocalized with CGRP. A smaller percentage of neurons expressed VGLUT(1) . VGLUT(2) -immunoreactive (IR) neurons in the MPG were rare. Abundant VGLUT(2) -IR nerves were detected in all layers of the colorectum; VGLUT(1) -IR nerves were sparse. A subpopulation of myenteric plexus neurons expressed VGLUT2 protein and mRNA, but VGLUT1 mRNA was undetectable. In conclusion, we show 1) that most colorectal DRG neurons express VGLUT(2) , and to a lesser extent, VGLUT(1) ; 2) abundance of VGLUT2-IR fibers innervating colorectum; and 3) a subpopulation of myenteric plexus neurons expressing VGLUT(2). Altogether, our data suggests a role for VGLUT(2) in colorectal glutamatergic neurotransmission, potentially influencing colorectal sensitivity and motility.

Visualization Catheter with Virtual Electrode Ablation. Background: Radiofrequency (RF) ablation utilizing direct endocardial visualization (DEV) requires a “virtual electrode” to deliver RF energy while preserving visualization. This study aimed to: (1) examine the virtual electrode RF ablation efficacy; (2) determine the optimal power and duration settings; and (3) evaluate the utility of virtual electrode unipolar electrograms. Methods and Results: The DEV catheter lesions were compared to lesions formed using a 3.5 mm open irrigated tip catheter within the right atria of 12 sheep. Generator power settings for DEV were titrated from 12W, 14W and 16W for 20, 30 and 40 seconds duration with 25 mL/min saline irrigation. Standard irrigated tip catheter settings of 30W, 50°C for 30 seconds and 30 mL/min were used. The DEV lesions were significantly greater in surface area and both major and minor axes compared to irrigated tip lesions (surface area 19.43 ± 9.09 vs 10.88 ± 4.72 mm, P

Anisotropy in the vadose zone impacts the flow and transport of water and contaminants. Progress has been made in incorporating anisotropy into flow and transport models; however, obtaining accurate estimation of the extent of anisotropy in porous media remains a technical challenge. Electrical and electromagnetic (EM) measurements can be used to investigate the anisotropy of layered media. We developed a parallel-plate time domain reflectometry (TDR) and electrical conductivity cell for accurately measuring the sample-scale dielectric (AKa) and electrical conductivity (A) anisotropy factors and used a dielectric mixture model to predict the theoretical dielectric anisotropy factor (A). Modeling of the cell EM transmission line sampling area based on electrode geometry facilitated an optimal design based on minimizing the sampling area coefficient of variation. This optimal design consists of thin (1-mm) parallel plates with a spacing/width ratio of 1. Dielectric and electrical conductivity measurements were made in mica, layered parallel to the plates in one cell and layered perpendicular to the plates in another. The resulting water-content-dependent dielectric measurements yielded sample-scale AKa factors with peak values of 2.4 occurring near 50% saturation, while electrical conductivity measurements found A values approaching 10 near 75% saturation. Furthermore, the shape of the water-content-dependent AKa followed a Gaussian distribution, while a three-phase dielectric mixture model predicted peak A near 40% saturation. Discrepancies in magnitude were attributed to model assumptions, packing irregularities, and heterogeneity in the mica packing structure, as noted by others. The occurrence of the peak AKa around 50% saturation corroborates anisotropy predictions for transport related to hydraulic processes.

Gardnerella vaginalis is a Gram-variable coccobacillus. It is found in small numbers in the vagina of a large proportion of healthy women, pregnant or not, and is detected in 1000-fold or greater numbers in bacterial vaginosis (BV), together with a multitude of other bacterial species, the individual organisms of which have also increased greatly in number (Rosenstein et al. 1996). Although Gardner & Dukes (1955); considered G. vaginalis (at that time termed Haemophilus vaginalis) to be the cause of ‘non-specific vaginitis’, now termed BV, its exact role is not clear. However, it seems reasonable to suppose that a very large increase in the number of G. vaginalis organisms in the vagina could increase the chance of their access to the upper genital tract and to possible involvement in pelvic inflammatory disease (PID). With this in mind, we have examined the effect of G. vaginalis on human and bovine oviduct organ cultures, in the same way that the effect of other genital-tract micro-organisms, namely Neisseria gonorrhoeae (Johnson et al. 1977; McGee et al. 1990) and Mobiluncus species (Taylor-Robinson et al. 1993), has been investigated. We also compared the effect of piliated and non-piliated strains of G. vaginalis as piliated and non-piliated strains of gonococci behave differently from each other (McGee et al. 1981).