1. ChemInform Abstract: A Hydrogen Bond Surrogate Approach for Stabilization of Short Peptide Sequences in α-Helical Conformation
- Author
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Anupam Patgiri, Andrea L. Jochim, and Paramjit S. Arora
- Subjects
chemistry.chemical_classification ,Transition state theory ,chemistry ,Stereochemistry ,Hydrogen bond ,Intramolecular force ,Helix ,Nucleation ,Salt metathesis reaction ,Peptide ,General Medicine ,Amino acid - Abstract
α-Helices constitute the largest class of protein secondary structures and play a major role in mediating protein−protein interactions. Development of stable mimics of short α-helices would be invaluable for inhibition of protein−protein interactions. This Account describes our efforts in developing a general approach for constraining short peptides in α-helical conformations by a main-chain hydrogen bond surrogate (HBS) strategy. The HBS α-helices feature a carbon−carbon bond derived from a ring-closing metathesis reaction in place of an N-terminal intramolecular hydrogen bond between the peptide i and i + 4 residues. Our approach is centered on the helix−coil transition theory in peptides, which suggests that the energetically demanding organization of three consecutive amino acids into the helical orientation inherently limits the stability of short α-helices. The HBS method affords preorganized α-turns to overcome this intrinsic nucleation barrier and initiate helix formation. The HBS approach is an a...
- Published
- 2009
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